HHsearch results for GI: 254780435 and protein with PDBid: 1k38_A
>1k38_A Penicillinase, beta-lactamase OXA-2; serine beta-lactamase, hydrolase, antibiotic resistance, carbamylated lysine; HET: KCX; 1.50A {Salmonella typhimurium} SCOP: e.3.1.1 PDB: 3if6_A*
Probab=99.18 E-value=2.8e-09 Score=74.73 Aligned_cols=207 Identities=11% Similarity=0.006 Sum_probs=122.8
Q ss_pred CEEEEEECCCCEEEEEEC----CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCC-CCCHHHH
Q ss_conf 568999978962977643----99830752698999999998513577778766035178772003664434-5101234
Q gi|254780435|r 29 PYYTLLDTNTGHVIAENY----PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF-KKGSTMT 103 (336)
Q Consensus 29 ~~~i~~d~~tG~iL~~kn----~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l-~~g~~~t 103 (336)
-+.+++|..||++++--+ +.++++|+|+-|++|++.+|| +|.++.++.+... ++..... .....++
T Consensus 21 G~~vv~D~~tg~~~a~~~n~~~a~~~y~PGSTfK~~~~~aaLe---~G~i~~~~~~~~~------~~~~~~~~~~~g~~t 91 (254)
T 1k38_A 21 GTIVVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALD---AGAVRDEFQIFRW------DGVNRGFAGHNQDQD 91 (254)
T ss_dssp EEEEEEECSSSSCCCEEESHHHHTCCBCCGGGGHHHHHHHHHH---HTSCCSTTCCBCC------CSCCCSCTTTSSCBC
T ss_pred EEEEEEECCCCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHHH---CCCCCCCCCCCCC------CCCCCCCCCCCCCCC
T ss_conf 8999998999857886149899668889972899999999998---4985432113468------987678888899979
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCC--CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 67776767774235899999764011178999999999987098353441235764--6222256999999989876312
Q gi|254780435|r 104 LDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVV--QHGHYTTARDMAILSWRIKTDF 181 (336)
Q Consensus 104 v~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~--~~~~~tTa~Dla~l~~~~~~~~ 181 (336)
+++. |..|.|-...-|++.+| .+.|.+.++.+|+.+.......+.. ..+-..|+.+|+.+...+..+-
T Consensus 92 l~~A----l~~S~N~~f~~la~~lG------~~~~~~~~~~~G~G~~~~~~~~~~~~~~g~~~itPlq~a~~~~~ian~g 161 (254)
T 1k38_A 92 LRSA----MRNSTVWVYELFAKEIG------DDKARRYLKKIDYGNADPSTSNGDYWIEGSLAISAQEQIAFLRKLYRNE 161 (254)
T ss_dssp HHHH----HHTTCHHHHHHHHHHHC------HHHHHHHHHHTTCTTCCCCC--CCTTTTSSCCBCHHHHHHHHHHHHTTC
T ss_pred HHHH----HHHCCHHHHHHHHHHHC------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 9999----99739399999999819------0889999998599999887653440017874375999999999997699
Q ss_pred ----HHHHCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEE-CCCCHHHHHHHH
Q ss_conf ----331101230200017447860145656689711533212411200023456428868999983-789866789999
Q gi|254780435|r 182 ----PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVIL-GALDRNTRNKVS 256 (336)
Q Consensus 182 ----p~~~~~~~~~~~~~~~~~~~N~N~ll~~~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvl-g~~~~~~r~~~~ 256 (336)
|...+.... . -+.-. ...+..++|||++...|+ ||+.+..++.++..+|+ ..+....-..-.
T Consensus 162 ~~~~~~~~~~~~~----~-~~~~~-------~~g~~vaGKTGTa~~~~W-FvG~~p~~~p~~~~av~i~~~~~~~~~~~a 228 (254)
T 1k38_A 162 LPFRVEHQRLVKD----L-MIVEA-------GRNWILRAKTGWEGRMGW-WVGWVEWPTGSVFFALNIDTPNRMDDLFKR 228 (254)
T ss_dssp SSSCHHHHHHHHH----H-TEEEE-------ETTEEEEEEEEESSSEEE-EEEEEEETTEEEEEEEEEECTTGGGGTHHH
T ss_pred EECCHHHHHHHHH----H-HHHHH-------HCCCEEEEEECCCCCCEE-EEEEEECCCCEEEEEEEEECCCCCCCHHHH
T ss_conf 4058006799999----9-98834-------259757776368986768-999998699869999999779997728999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999998514
Q gi|254780435|r 257 ASLLSMGFYNK 267 (336)
Q Consensus 257 ~~Ll~~~f~~f 267 (336)
..+....|+..
T Consensus 229 ~~i~~~il~~l 239 (254)
T 1k38_A 229 EAIVRAILRSI 239 (254)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
T ss_conf 99999999984