HHsearch results for GI: 254780435 and protein with PDBid: 1qme_A
>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C*
Probab=98.50 E-value=2e-05 Score=51.21 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=83.9
Q ss_pred CEEEEEECCCCEEEEEE-------C---------------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHH
Q ss_conf 56899997896297764-------3---------------9983075269899999999851357777876603517877
Q gi|254780435|r 29 PYYTLLDTNTGHVIAEN-------Y---------------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA 86 (336)
Q Consensus 29 ~~~i~~d~~tG~iL~~k-------n---------------~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~ 86 (336)
-++++||..||+||.-- | ....++|+|+-|++|+..+++ +|.+++++.+.-...
T Consensus 241 g~~Vvmd~~TG~IlAmas~p~~d~n~~~~~~~~~~~~~~~~~~~~~PGStfK~~t~aaALe---~g~~~~~~~~~~~~~- 316 (702)
T 1qme_A 241 MTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAID---NNTFPGGEVFNSSEL- 316 (702)
T ss_dssp EEEEEEETTTCBEEEEEEESCCCTTTCTTCCTTCCCCCTTTSCCBCCGGGGHHHHHHHHHH---TTCCCTTCEEECSCE-
T ss_pred EEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHH---CCCCCCCCEEECCCC-
T ss_conf 3799997789908998325777755443456322202531011257752022998999997---697323302301340-
Q ss_pred HHCCCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC-EEECC---
Q ss_conf 20036644-------34510123467776767774235899999764011178999999999987098353-44123---
Q gi|254780435|r 87 SEYPPSNS-------TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT-HFMNA--- 155 (336)
Q Consensus 87 ~~~~~s~~-------~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T-~f~n~--- 155 (336)
..++... ....+-.+++++. +..|.|-++..+++.+| .+.+-+.++.+|+... .+.-|
T Consensus 317 -~~~~~~~~~~~~~~~~~~~G~itl~~a----l~~S~N~~~~~l~~~lG------~~~~~~~~~~fG~g~~t~i~~~~e~ 385 (702)
T 1qme_A 317 -KIADATIRDWDVNEGLTGGRMMTFSQG----FAHSSNVGMTLLEQKMG------DATWLDYLNRFKFGVPTRFGLTDEY 385 (702)
T ss_dssp -EETTEEECCHHHHTTSCSCCEEEHHHH----HHTTCHHHHHHHHHHHC------HHHHHHHHHHTTTTSCCCCSSSSCC
T ss_pred -EECCCCCCCCCCCCCCCCCCEEEHHHH----CCCCCCHHHHHHHHHCC------CHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf -436852102446766778720013441----25233712566654258------4367889886078866688875345
Q ss_pred CCC-CC------------CCCCCCHHHHHHHHHHHHH
Q ss_conf 576-46------------2222569999999898763
Q gi|254780435|r 156 HGV-VQ------------HGHYTTARDMAILSWRIKT 179 (336)
Q Consensus 156 ~Gl-~~------------~~~~tTa~Dla~l~~~~~~ 179 (336)
.|. +. .+...|+-+|+.....++.
T Consensus 386 ~g~~p~~~~~~~a~~~~Gq~~~vTPlqma~ayaaiAN 422 (702)
T 1qme_A 386 AGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIAN 422 (702)
T ss_dssp CCBCCCSSHHHHHHGGGTCSCBBCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHC
T ss_conf 7768765533333143079866799999999999971