HHsearch results for GI: 254780435 and protein with PDBid: 1qme_A

>1qme_A Penicillin-binding protein 2X; peptidoglycan synthesis, resistance, cell WALL, transmembrane; 2.4A {Streptococcus pneumoniae} SCOP: d.11.1.1 d.11.1.1 d.175.1.1 e.3.1.1 PDB: 1qmf_A* 1pyy_A* 1rp5_A 1pmd_A 1k25_A 2zc3_B* 2z2l_B* 2z2m_B* 2zc4_B* 2zc3_A* 2z2l_A* 2z2m_A* 2zc4_A* 2zc3_C* 2z2l_C* 2z2m_C* 2zc4_C*
Probab=98.50  E-value=2e-05  Score=51.21  Aligned_cols=136  Identities=15%  Similarity=0.125  Sum_probs=83.9

Q ss_pred             CEEEEEECCCCEEEEEE-------C---------------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHH
Q ss_conf             56899997896297764-------3---------------9983075269899999999851357777876603517877
Q gi|254780435|r   29 PYYTLLDTNTGHVIAEN-------Y---------------PDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA   86 (336)
Q Consensus        29 ~~~i~~d~~tG~iL~~k-------n---------------~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~   86 (336)
                      -++++||..||+||.--       |               ....++|+|+-|++|+..+++   +|.+++++.+.-... 
T Consensus       241 g~~Vvmd~~TG~IlAmas~p~~d~n~~~~~~~~~~~~~~~~~~~~~PGStfK~~t~aaALe---~g~~~~~~~~~~~~~-  316 (702)
T 1qme_A          241 MTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSTMKVMMLAAAID---NNTFPGGEVFNSSEL-  316 (702)
T ss_dssp             EEEEEEETTTCBEEEEEEESCCCTTTCTTCCTTCCCCCTTTSCCBCCGGGGHHHHHHHHHH---TTCCCTTCEEECSCE-
T ss_pred             EEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHH---CCCCCCCCEEECCCC-
T ss_conf             3799997789908998325777755443456322202531011257752022998999997---697323302301340-


Q ss_pred             HHCCCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC-EEECC---
Q ss_conf             20036644-------34510123467776767774235899999764011178999999999987098353-44123---
Q gi|254780435|r   87 SEYPPSNS-------TFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSAT-HFMNA---  155 (336)
Q Consensus        87 ~~~~~s~~-------~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T-~f~n~---  155 (336)
                       ..++...       ....+-.+++++.    +..|.|-++..+++.+|      .+.+-+.++.+|+... .+.-|   
T Consensus       317 -~~~~~~~~~~~~~~~~~~~G~itl~~a----l~~S~N~~~~~l~~~lG------~~~~~~~~~~fG~g~~t~i~~~~e~  385 (702)
T 1qme_A          317 -KIADATIRDWDVNEGLTGGRMMTFSQG----FAHSSNVGMTLLEQKMG------DATWLDYLNRFKFGVPTRFGLTDEY  385 (702)
T ss_dssp             -EETTEEECCHHHHTTSCSCCEEEHHHH----HHTTCHHHHHHHHHHHC------HHHHHHHHHHTTTTSCCCCSSSSCC
T ss_pred             -EECCCCCCCCCCCCCCCCCCEEEHHHH----CCCCCCHHHHHHHHHCC------CHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             -436852102446766778720013441----25233712566654258------4367889886078866688875345


Q ss_pred             CCC-CC------------CCCCCCHHHHHHHHHHHHH
Q ss_conf             576-46------------2222569999999898763
Q gi|254780435|r  156 HGV-VQ------------HGHYTTARDMAILSWRIKT  179 (336)
Q Consensus       156 ~Gl-~~------------~~~~tTa~Dla~l~~~~~~  179 (336)
                      .|. +.            .+...|+-+|+.....++.
T Consensus       386 ~g~~p~~~~~~~a~~~~Gq~~~vTPlqma~ayaaiAN  422 (702)
T 1qme_A          386 AGQLPADNIVNIAQSSFGQGISVTQTQMIRAFTAIAN  422 (702)
T ss_dssp             CCBCCCSSHHHHHHGGGTCSCBBCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHC
T ss_conf             7768765533333143079866799999999999971