HHsearch results for GI: 254780435 and protein with PDBid: 1w5d_A
>1w5d_A Penicillin-binding protein; D-Ala-D-Ala-carboxypeptidase, peptidoglycan, beta-lactam, hydrolase, peptidoglycan synthesis; 2.1A {Bacillus subtilis} SCOP: e.3.1.3 PDB: 2j9p_A*
Probab=99.61 E-value=9.1e-14 Score=102.03 Aligned_cols=140 Identities=19% Similarity=0.243 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHCCCC--CCEEECCCCCCCCCCCCCHHHHH
Q ss_conf 12346777676777423589999976401------11789999999999870983--53441235764622225699999
Q gi|254780435|r 100 STMTLDNALKLLIVKSANDIAVAIAESLC------KTEKKFVQHMNNTSKNLGLS--ATHFMNAHGVVQHGHYTTARDMA 171 (336)
Q Consensus 100 ~~~tv~dll~~~li~S~Ndaa~aLAe~i~------Gs~~~Fv~~MN~~a~~lG~~--~T~f~n~~Gl~~~~~~tTa~Dla 171 (336)
+.-++.++++.|+-.|.|-.|.+|...++ |+.+.-.+.|.+..+++|+. +.++.|-||| ...|..||++|+
T Consensus 284 ~S~pL~~lv~~mlk~SdN~~AE~L~~~lg~~~~~~~s~~~g~~~v~~~l~~~gi~~~~~~l~DGSGL-Sr~Nrisp~~l~ 362 (462)
T 1w5d_A 284 RSMPLSKLFVPFMKLSNNGHAEVLVKEMGKVKKGEGSWEKGLEVLNSTLPEFGVDSKSLVLRDGSGI-SHIDAVSSDQLS 362 (462)
T ss_dssp ECCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHTSCCSHHHHHHHHHHHGGGGTCCGGGCBCSCSSSC-CTTCBBCHHHHH
T ss_pred CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC-CCCCCCCHHHHH
T ss_conf 2711999999998438729999999999997379986688999999999972788665277558878-755652999999
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCC-------EEEEECCCCCC-CCCCEEEEEEECCHHHHHEEEEEEE-ECCEEEEEE
Q ss_conf 99898763123311012302000174-------47860145656-6897115332124112000234564-288689999
Q gi|254780435|r 172 ILSWRIKTDFPQYMHYFQIKGLEIKG-------KKYPNTNWAVG-TFLGADGMKTGFTCASGFNIVASAI-QGDQSLIAV 242 (336)
Q Consensus 172 ~l~~~~~~~~p~~~~~~~~~~~~~~~-------~~~~N~N~ll~-~~~gv~G~KTG~t~~AG~~lv~~a~-~~g~~li~V 242 (336)
.+..++. +.|.+..+... +...| .++.| ++-. .-.|..-.|||+.+. -.||++... ++|++++.+
T Consensus 363 ~lL~~~~-~~~~~~~~~~s--LPvaG~~~~~v~GTL~~--R~~~~~~~g~v~aKTGTL~~-v~aLaGyv~t~~G~~~~Fs 436 (462)
T 1w5d_A 363 QLLYDIQ-DQSWFSAYLNS--LPVAGNPDRMVGGTLRN--RMKGTPAQGKVRAKTGSLST-VSSLSGYAETKSGKKLVFS 436 (462)
T ss_dssp HHHHHHT-TSTTHHHHHHH--SCBTTCSSHHHHGGGTT--SSTTSTTTTTEEEEEEEETT-EEEEEEEEECSSSCEEEEE
T ss_pred HHHHHHH-HCCCHHHHHHH--CCCCCCCCCCCCCCHHH--HCCCCCCCCEEEEEEEEECC-CEEEEEEEECCCCCEEEEE
T ss_conf 9999988-59207899972--98478878776872565--42478767749999752389-4685899998998999999
Q ss_pred EECC
Q ss_conf 8378
Q gi|254780435|r 243 ILGA 246 (336)
Q Consensus 243 vlg~ 246 (336)
+|-.
T Consensus 437 i~~N 440 (462)
T 1w5d_A 437 ILLN 440 (462)
T ss_dssp EEEE
T ss_pred EEEC
T ss_conf 9957