HHsearch results for GI: 254780435 and protein with PDBid: 1z6f_A
>1z6f_A Penicillin-binding protein 5; peptidoglycan synthesis, DD- carboxypeptidase, hydrolase, boronic acid; HET: BO9; 1.60A {Escherichia coli} SCOP: b.105.1.1 e.3.1.1 PDB: 1nzu_A 1nzo_A* 3beb_A* 3bec_A* 1nj4_A 1hd8_A 1sdn_A
Probab=100.00 E-value=0 Score=565.13 Aligned_cols=316 Identities=27% Similarity=0.338 Sum_probs=268.2
Q ss_pred CCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH------CCCC
Q ss_conf 3578754478568999978962977643998307526989999999985135777787660351787720------0366
Q gi|254780435|r 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE------YPPS 92 (336)
Q Consensus 19 ~~~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~------~~~s 92 (336)
..+.+|.+.|++|||||++||+|||+||+|+++||||+|||||+|+++|++++|+++|+++|++|++++. .++|
T Consensus 8 ~~p~~P~i~a~aaiv~d~~tG~iL~~kn~~~~~~~ASlTKlMTa~v~le~i~~g~l~~~~~v~vs~~a~~~~~~~~~~~s 87 (363)
T 1z6f_A 8 MIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGNDAWATGNPVFKGSS 87 (363)
T ss_dssp CCCCCCCCSEEEEEEEETTTCCEEEEESTTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEECCGGGCGGGCGGGTTSC
T ss_pred CCCCCCCCCCEEEEEEECCCCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCCCC
T ss_conf 68998976520999999999989000690998186899999999999999873999856569833899852366335875
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 44345101234677767677742358999997640111789999999999870983534412357646222256999999
Q gi|254780435|r 93 NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172 (336)
Q Consensus 93 ~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~~~~tTa~Dla~ 172 (336)
+++|++|+++|++|||++||++|+||||++|||+++||+++||++||++|+||||+||||.|||||++++|+|||+||++
T Consensus 88 ~~~l~~ge~~tv~dLl~~lli~SaNdAA~aLAe~~~Gs~~~Fv~~MN~kA~elG~~~T~f~np~Gl~~~~~~tta~Dla~ 167 (363)
T 1z6f_A 88 LMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMAL 167 (363)
T ss_dssp CCCCCTTCEEEHHHHHHHHHTTCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCSSCBCCSSSCCCCTTCBBCHHHHHH
T ss_pred CCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHH
T ss_conf 11345898999999999987656439999999863899999999999999996056650443688872467377899998
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCC-CCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHH
Q ss_conf 9898763123311012302000174478601456566-897115332124112000234564288689999837898667
Q gi|254780435|r 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251 (336)
Q Consensus 173 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll~~-~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~ 251 (336)
|++++++++|++..+++.+++++.+..+.|+|.+|.. ++|++|+|||||++||+||+++++|+|+|+|+||||+++...
T Consensus 168 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~n~n~~l~~~~~~~~G~KTG~t~~AG~~lv~~a~~~g~~~i~Vvlg~~~~~~ 247 (363)
T 1z6f_A 168 IGQALIRDVPNEYSIYKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG 247 (363)
T ss_dssp HHHHHHHHCHHHHGGGGCCEEEETTEEEECSCGGGGCTTSEEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEECCSTT
T ss_pred HHHHHHCCCCCCEEEEEEEEEECCCCEEECCCHHHHCCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEECCCCHHH
T ss_conf 89998458862002456776503784111463344355777606999887135864577899689638999989998567
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC---CCCCCCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 899999999999851453202345545520---145554234-6543202113455432332113444454426811200
Q gi|254780435|r 252 RNKVSASLLSMGFYNKTDRKKINYIIKDFY---QQNLSNEVP-NISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327 (336)
Q Consensus 252 r~~~~~~Ll~~~f~~f~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 327 (336)
||.++++|++|+|++|....++.+...... ..+....++ ....++..............+.........+|+++++
T Consensus 248 r~~d~~~L~~~~f~~~~~~~~~~~~~~v~~~~V~~g~~~~v~l~~~~~~~~~lpk~~~~~~~~~~~~~~~~l~APvkkG~ 327 (363)
T 1z6f_A 248 REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQ 327 (363)
T ss_dssp TTHHHHHHHHHHHHHEEEEEEECTTSCSEEEECBSBSSSEEEEECSSCEEEEEETTCGGGCEEEEEESSSSCBSCBCTTC
T ss_pred HHHHHHHHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCEECCCCCCCEEEEEECCCCCCCEEEEEECCCCEECCCCCCC
T ss_conf 79999999999986408996302687211004651444300000367669998888645637999987875204568999
Q ss_pred ECCCEEC
Q ss_conf 0133010
Q gi|254780435|r 328 LLKNKIT 334 (336)
Q Consensus 328 ~~~~~i~ 334 (336)
.+|+...
T Consensus 328 ~VG~v~i 334 (363)
T 1z6f_A 328 VVGTINF 334 (363)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
T ss_conf 9999999