HHsearch results for GI: 254780435 and protein with PDBid: 2bcf_A
>2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=499.78 Aligned_cols=251 Identities=22% Similarity=0.231 Sum_probs=227.8
Q ss_pred CCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCC
Q ss_conf 35787544785689999789629776439983075269899999999851357777876603517877200366443451
Q gi|254780435|r 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTFKK 98 (336)
Q Consensus 19 ~~~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l~~ 98 (336)
.....|.+.|++|||+|++||+|||+||+|+++||||+|||||+|+++|++ ++++.++++......+++.++|++
T Consensus 10 ~~~~~P~i~A~saiv~D~~tG~iL~~kn~d~~~~pASlTKlMTa~v~le~~-----~~~~~v~~~~~~~~~~~s~~~l~~ 84 (276)
T 2bcf_A 10 GSVPIPDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDEL-----DLNSTVVADVADTQAECNCVGVKP 84 (276)
T ss_dssp TCCCCCCCSCSEEEEEETTTCEEEEEESTTCCBCCGGGHHHHHHHHHHHHC-----CTTCEEECCTGGGCCSSCCCCCCT
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC-----CCCCEEEEEHHHHHHHCEEEEECC
T ss_conf 889999976408999999999890004929982738999999999999834-----789869974455442210343269
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC--CCCCCHHHHHHHHHH
Q ss_conf 012346777676777423589999976401117899999999998709835344123576462--222569999999898
Q gi|254780435|r 99 GSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQH--GHYTTARDMAILSWR 176 (336)
Q Consensus 99 g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~--~~~tTa~Dla~l~~~ 176 (336)
|+++|++|||++||+.|+||||++|||++||+ ++||++||++|++|||++|||.||+||+++ +|+|||+||++|+++
T Consensus 85 G~~~tv~dLl~~~lv~S~NdAA~aLA~~~gg~-~~Fv~~MN~~A~~lGm~~T~F~np~Gl~~~~~~~~sTA~Dla~l~~~ 163 (276)
T 2bcf_A 85 GRSYTVRQLLDGLLLVSGNDAANTLAHMLGGQ-DVTVAKMNAKAATLGATSTHATTPSGLDGPGGSGASTAHDLVVIFRA 163 (276)
T ss_dssp TCEEEHHHHHHHHHHSCCHHHHHHHHHHTTCH-HHHHHHHHHHHHHHTCTTCBCSSSSSSCBTTBSCBBCHHHHHHHHHH
T ss_pred CCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 98999999998898862377999988875697-57999999999984977566067877999875554689999999999
Q ss_pred HHHHHHHHHCCCCEEECCCC----CEEEEECCCCCCCCCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCC---CH
Q ss_conf 76312331101230200017----447860145656689711533212411200023456428868999983789---86
Q gi|254780435|r 177 IKTDFPQYMHYFQIKGLEIK----GKKYPNTNWAVGTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGAL---DR 249 (336)
Q Consensus 177 ~~~~~p~~~~~~~~~~~~~~----~~~~~N~N~ll~~~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~---~~ 249 (336)
+++ +|+|.++++++++.+. ...+.|+|+||+.|+|++|+|||||++||+||+++++|||+|+|+||||+. +.
T Consensus 164 ~~~-~p~~~~i~~~~~~~~~~~~~~~~~~n~n~ll~~~~g~~G~KTG~t~~AG~~lv~~a~~~g~~lI~vVlg~~~~~~~ 242 (276)
T 2bcf_A 164 AMA-NPVFAQIIAEPSAMFPSDDGEQLIVNQDELLQRYPGAIGGKTGYTNAARKTFVGAAARGGRRLVIAMMYGLVKEGG 242 (276)
T ss_dssp HHH-SHHHHHHHHCSEEEECCC--CEEEECCCTHHHHSTTEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEECCCTTC
T ss_pred HHH-CCHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEEEECCEEEEEEEECCCCCCCH
T ss_conf 986-8066643435789993566731255534024407882440363024788579999999997999999788777871
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 678999999999998514532023455
Q gi|254780435|r 250 NTRNKVSASLLSMGFYNKTDRKKINYI 276 (336)
Q Consensus 250 ~~r~~~~~~Ll~~~f~~f~~~~~~~~~ 276 (336)
..||.|+++|+||||..++...+...+
T Consensus 243 ~~r~~d~~~Lld~gF~~~~~~~v~~~g 269 (276)
T 2bcf_A 243 PTYWDQAATLFDWGFALNPQASVGSLG 269 (276)
T ss_dssp CCHHHHHHHHHHHHHHSCTTCCSEEC-
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 479999999999873458777146076