HHsearch results for GI: 254780435 and protein with PDBid: 2iwb_A
>2iwb_A Methicillin resistance MECR1 protein; antibiotic resistance, bacterial antibiotic resistance, methicillin resistance, beta-lactamic antibiotics, MRSA; 1.8A {Staphylococcus aureus} PDB: 2iwc_A* 2iwd_A*
Probab=99.19 E-value=1.3e-09 Score=76.71 Aligned_cols=186 Identities=11% Similarity=0.038 Sum_probs=115.3
Q ss_pred CEEEEEECCCCEEEEEECC---CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCCCCCC-CCCHHHHH
Q ss_conf 5689999789629776439---9830752698999999998513577778766035178772003664434-51012346
Q gi|254780435|r 29 PYYTLLDTNTGHVIAENYP---DHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPSNSTF-KKGSTMTL 104 (336)
Q Consensus 29 ~~~i~~d~~tG~iL~~kn~---~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s~~~l-~~g~~~tv 104 (336)
-+++++|..||+++. -|. .++++|+|+-|++|++.+|| +|.++.++.+... ++..... .....+++
T Consensus 24 G~~v~~d~~tg~~~~-~n~~~~~~~y~PGStfK~~t~~aaLe---~g~~~~~~~~~~~------~~~~~~~~~~~g~~~l 93 (246)
T 2iwb_A 24 GSFVLYNEREQAYSI-YNEPESKQRYSPNSTYKIYLALMAFD---QNLLSLNHTEQQW------DKHQYPFKEWNQDQNL 93 (246)
T ss_dssp EEEEEEETTTTEEEE-ESHHHHTBCBCCGGGGHHHHHHHHHH---TTSSBTTBCCBCC------CCCCCSSGGGSSCBCH
T ss_pred EEEEEEECCCCCEEE-ECHHHHCCCCCCCCHHHHHHHHHHHH---CCCCCCCCCCCCC------CCCCCCCCCCCCCCCH
T ss_conf 469999789996760-58889668779963699999999998---4997885434169------9866178988997077
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCC-CCCCCCCCCCHHHHHHHHHHHHHHH--
Q ss_conf 7776767774235899999764011178999999999987098353441235-7646222256999999989876312--
Q gi|254780435|r 105 DNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH-GVVQHGHYTTARDMAILSWRIKTDF-- 181 (336)
Q Consensus 105 ~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~-Gl~~~~~~tTa~Dla~l~~~~~~~~-- 181 (336)
++. |..|+|.+..-|++.+| .+.|.+.++.+|+.+.....+. ++...+-..|+.+|+.+...+...-
T Consensus 94 ~~A----l~~S~N~~~~~la~~lG------~~~~~~~~~~~G~g~~~~~~~~~~~~~g~~~iTPlqma~~~~~ian~g~~ 163 (246)
T 2iwb_A 94 NSS----MKYSVNWYYENLNKHLR------QDEVKSYLDLIEYGNEEISGNENYWNESSLKISAIEQVNLLKNMKQHNMH 163 (246)
T ss_dssp HHH----HHTTCHHHHHHHHTTSC------HHHHHHHHHHHTCTTCCCCSCSSTTSSSSCCBCHHHHHHHHHHHHTTCSS
T ss_pred HHH----HHCCCHHHHHHHHHHCC------CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 884----22456299999998728------60789999982899998898764222687525699999999999838967
Q ss_pred --HHHHCCCCEEECCCCCEEEEECCCCCCCCCCEEEEEEECCHHHHH--EEEEEEEECCEEEEEEEE
Q ss_conf --331101230200017447860145656689711533212411200--023456428868999983
Q gi|254780435|r 182 --PQYMHYFQIKGLEIKGKKYPNTNWAVGTFLGADGMKTGFTCASGF--NIVASAIQGDQSLIAVIL 244 (336)
Q Consensus 182 --p~~~~~~~~~~~~~~~~~~~N~N~ll~~~~gv~G~KTG~t~~AG~--~lv~~a~~~g~~li~Vvl 244 (336)
|+..+.... ....... ..+...-+.|||.+..... -||+.+..++.+++++|+
T Consensus 164 ~~p~~~~~~~~------~~~~~~~----~~~~~~~ktgTg~~~~~~~~aWFvGf~p~~~p~~~~~v~ 220 (246)
T 2iwb_A 164 FDNKAIEKVEN------SMTLKQK----DTYKYVGKTGTGIVNHKEANGWFVGYVETKDNTYYFATH 220 (246)
T ss_dssp SCHHHHHHHHH------HTEEEEC----SSEEEEEEEEEEEETTEEEEEEEEEEEEESSCEEEEEEE
T ss_pred CCCHHHHHHHH------HHHHHHH----HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEE
T ss_conf 88325567777------7777654----234432110104468988788999999889995999999