HHsearch results for GI: 254780435 and protein with PDBid: 2v2f_F
>2v2f_F Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=98.47 E-value=1.2e-05 Score=52.63 Aligned_cols=138 Identities=17% Similarity=0.107 Sum_probs=79.3
Q ss_pred CEEEEEECCCCEEEEE-------EC--------CCCCCCCHHHHHHHHHHH-HHHHCCCCCCCCCCEEEEC-HHHHHCCC
Q ss_conf 5689999789629776-------43--------998307526989999999-9851357777876603517-87720036
Q gi|254780435|r 29 PYYTLLDTNTGHVIAE-------NY--------PDHPWNPASLTKLMTAYV-VFSFLKEKKAMLTTPITIS-KNASEYPP 91 (336)
Q Consensus 29 ~~~i~~d~~tG~iL~~-------kn--------~~~~~~~AS~tKlmTa~~-~~~~i~~g~~~ld~~v~vs-~~~~~~~~ 91 (336)
-++++||..||+||.- .| ....++|+|+-|.+|+|. ++| +|.+..+..+... ......++
T Consensus 66 ~a~vv~d~~TG~IlA~vg~~~~~~~~~~~~N~a~~~~~~pGStfKp~~~~aaale---~g~~~~~~~~~~~~~~~~~~~~ 142 (390)
T 2v2f_F 66 VASTVVDVSNGKVIAQLGARHQASNVSFGTNQAVETNRDWGSAMKPITDYAPAIE---YGVYDSTATMVNDIPYNYPGTS 142 (390)
T ss_dssp EEEEEEETTTTEEEEEECCCC-----CCCCCTTTCCCSCCGGGGHHHHTHHHHHH---TTSCSBTTCEEEESCEECTTSS
T ss_pred EEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH---CCCCCCCEEEECCCCCCCCCCC
T ss_conf 8999998899949999967877767655643222056688741779999999997---6986664057526761015799
Q ss_pred C---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCC----CCC--CCC
Q ss_conf 6---4434510123467776767774235899999764011178999999999987098353441235----764--622
Q gi|254780435|r 92 S---NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAH----GVV--QHG 162 (336)
Q Consensus 92 s---~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~----Gl~--~~~ 162 (336)
. +..-...-.+++++. |..|.|-.+.-|++.+| .+.+-+.++.+|+..-...... ++. ..+
T Consensus 143 ~~~~n~~~~~~G~vtl~~A----l~~S~N~~~~~l~~~~G------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~ 212 (390)
T 2v2f_F 143 TPVYNWDRAYFGNITLQYA----LQQSRNVTAVETLNKVG------LDRAKTFLNGLGIDYPSMHYANAISSNTTESNKQ 212 (390)
T ss_dssp CEECCTTSCCCEEEEHHHH----HHTTCHHHHHHHHHHHC------HHHHHHHHHTTTCCCSSCCGGGGSCSCSSCCCTT
T ss_pred CCCCCCCCCCCCCEEHHHH----HHHCCHHHHHHHHHHCC------CHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 8743079985774229999----98633037889987539------2789999998299987644442223211105864
Q ss_pred CCCCHHHHHHHHHHHHH
Q ss_conf 22569999999898763
Q gi|254780435|r 163 HYTTARDMAILSWRIKT 179 (336)
Q Consensus 163 ~~tTa~Dla~l~~~~~~ 179 (336)
.-.|+-+|+.....+..
T Consensus 213 ~~vtplqma~ayaaiaN 229 (390)
T 2v2f_F 213 YGASSEKMAAAYAAFAN 229 (390)
T ss_dssp SSCCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHC
T ss_conf 04589999999999864