HHsearch results for GI: 254780435 and protein with PDBid: 3a3d_A
>3a3d_A PBP4, penicillin-binding protein 4; DACB, hydrolase; 1.60A {Haemophilus influenzae} PDB: 3a3e_A* 3a3f_A* 3a3i_A*
Probab=99.71 E-value=6.1e-15 Score=109.22 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHCCCC--CCEEECCCCCCCCCCCCCHHHHH
Q ss_conf 2346777676777423589999976401-------11789999999999870983--53441235764622225699999
Q gi|254780435|r 101 TMTLDNALKLLIVKSANDIAVAIAESLC-------KTEKKFVQHMNNTSKNLGLS--ATHFMNAHGVVQHGHYTTARDMA 171 (336)
Q Consensus 101 ~~tv~dll~~~li~S~Ndaa~aLAe~i~-------Gs~~~Fv~~MN~~a~~lG~~--~T~f~n~~Gl~~~~~~tTa~Dla 171 (336)
+-++.+++..|+-.|.|-.|..|...++ ++.+.-...|.+..+++|+. +.++.+.+|| ...|..||++|.
T Consensus 270 S~pL~~il~~mlk~SdN~~AE~L~~~lg~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~DGSGL-Sr~N~it~~~l~ 348 (453)
T 3a3d_A 270 SKPLPDLLKKMMKKSDNQIADSLFRAVAFNYYKRPASFQLGTLAVKSILQKQGIRFGNSILADGSGL-SRHNLVAPKTML 348 (453)
T ss_dssp CCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTSCBCHHHHHHHHHHHHHHTTCCCTTCBCCCSSSC-CTTCBBCHHHHH
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCC-CCCCCCCHHHHH
T ss_conf 7209999999984597189999999998874589860778898888899972999765255277777-734431899999
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCC-CCCEEEEEEECCHHHHHEEEEEEE-ECCEEEEEEEE
Q ss_conf 99898763123311012302000174478601456566-897115332124112000234564-28868999983
Q gi|254780435|r 172 ILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGT-FLGADGMKTGFTCASGFNIVASAI-QGDQSLIAVIL 244 (336)
Q Consensus 172 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll~~-~~gv~G~KTG~t~~AG~~lv~~a~-~~g~~li~Vvl 244 (336)
.+..++. +.|.+..+...--+.....++.++..+... -.|-.-.|||+.+.. .||++... ++|++++.++|
T Consensus 349 ~lL~~~~-~~~~~~~~~~sLpv~G~~Gtl~~r~~~~~~~~~g~v~aKTGtL~~v-~sLaGyi~~~~G~~~~fsi~ 421 (453)
T 3a3d_A 349 SVLEYIA-KNEDKLHLMETFPIAGVDGTISGRGGLISPPLVKNVIAKTGSLKGV-YNLAGFMTNARGEKVAFVQF 421 (453)
T ss_dssp HHHHHHH-HTHHHHCCGGGSCBTTTSGGGTTCGGGSSTTTTTTCEEEEEEETTE-EEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHH-HCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC-EEEEEEEECCCCCEEEEEEE
T ss_conf 9999987-5952789997388057777545656556777668499987263784-58799999699899999999