HHsearch results for GI: 254780435 and protein with PDBid: 3cjm_A

>3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Enterococcus faecalis V583}
Probab=100.00  E-value=9.2e-32  Score=211.70  Aligned_cols=219  Identities=14%  Similarity=0.079  Sum_probs=164.2

Q ss_pred             EEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCC-CCCCCCCHHHHHHHHH
Q ss_conf             689999789629776439983075269899999999851357777876603517877200366-4434510123467776
Q gi|254780435|r   30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-NSTFKKGSTMTLDNAL  108 (336)
Q Consensus        30 ~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s-~~~l~~g~~~tv~dll  108 (336)
                      +..++|.+||++ ++.|+|+++||||++|+|+++.+++++++|+++||++|++++.....+++ .+.+.+|+.+|++||+
T Consensus        53 ~v~~~dl~tg~~-~~~n~~~~~~~AS~~Kl~~~~~~l~~v~~G~l~l~~~v~~~~~~~~~~~~~~~~~~~g~~~sl~dLl  131 (282)
T 3cjm_A           53 GISYLDLETGEQ-RSVNGQHEFYTASTIKVPLTMLVADTVASGQKKWTDLIPYNAEEDYEEGTGIIAYNIQPEYPLKTLQ  131 (282)
T ss_dssp             EEEEEETTTCCE-EEESTTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEECCHHHHCCCSSCSGGGSCCSEEEHHHHH
T ss_pred             EEEEEECCCCCE-EEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCCCCEEECCCCEEEHHHHH
T ss_conf             999998999988-8888998422188899999999999997499887772686189961589862572589826699999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHH
Q ss_conf             7677742358999997640111789999999999870983534412357646222256999999989876312---3311
Q gi|254780435|r  109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF---PQYM  185 (336)
Q Consensus       109 ~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~~~~tTa~Dla~l~~~~~~~~---p~~~  185 (336)
                      ++||+.|+|+||++|++++||+..     +|++..++|+.++.+.       ..|.+|++|++.+..++..+.   |...
T Consensus       132 ~~mi~~SdN~Aan~L~~~lGg~~~-----~~~~~~~~g~~~~~~~-------~~~~~T~~d~~~ll~~l~~~~~~~~~~~  199 (282)
T 3cjm_A          132 EYAITYSDNIAKNMLYDTLGGDAK-----AKREMYQRYLHKTPSI-------EEPQFSSEDALVILQKLYTEKATKPDYQ  199 (282)
T ss_dssp             HHHHHTCCHHHHHHHHHHTTCHHH-----HHHHHHHHHTSCCCCS-------SSCEECHHHHHHHHHHHHHHTTTCHHHH
T ss_pred             HHHHHHCCHHHHHHHHHHHCCCHH-----HHHHHHHCCCCCCCCC-------CCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf             999984126999999998298499-----9999997057668875-------5677789999999999974877886899


Q ss_pred             CCCCEEECCCCCEEEEECCCCC-CCCCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHHHH-----HHHHHH
Q ss_conf             0123020001744786014565-6689711533212411200023456428868999983789866789-----999999
Q gi|254780435|r  186 HYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN-----KVSASL  259 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~N~N~ll-~~~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~r~-----~~~~~L  259 (336)
                      .+...     -..... .+++- +-.++..+.|||+++.+ +|.++....++ ++|+|||.....+.+.     +-++.+
T Consensus       200 ~l~~~-----l~~~~~-~~~l~~~lp~~~va~KtG~~~~~-~~d~giV~~~~-~yiiav~t~~~~~~~~~~~i~~is~~i  271 (282)
T 3cjm_A          200 AIYDS-----MKQSVF-HERMETPTTQGKVAHKIGSYDEF-IHDMGILETPH-PFALAIFTKGPDNAKSAAFIASVTDKL  271 (282)
T ss_dssp             HHHHH-----HHSCSC-CCTTCCTTTTTSEEEEEEEETTE-EEEEEEECSSS-CEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred             HHHHH-----HHCCCC-CCCHHCCCCCCCEEEEECCCCCC-EEEEEEEECCC-CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             99999-----844778-73110258878068620265770-47899995799-889999947998078999999999999


Q ss_pred             HHHHHHHCCC
Q ss_conf             9999851453
Q gi|254780435|r  260 LSMGFYNKTD  269 (336)
Q Consensus       260 l~~~f~~f~~  269 (336)
                      ++|.+++|+.
T Consensus       272 y~~~~~~~~~  281 (282)
T 3cjm_A          272 WQLQVSEYPN  281 (282)
T ss_dssp             HHHHHHSCCC
T ss_pred             HHHHHHCCCC
T ss_conf             9977642799