HHsearch results for GI: 254780435 and protein with PDBid: 3cjm_A
>3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Enterococcus faecalis V583}
Probab=100.00 E-value=9.2e-32 Score=211.70 Aligned_cols=219 Identities=14% Similarity=0.079 Sum_probs=164.2
Q ss_pred EEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCCCC-CCCCCCCHHHHHHHHH
Q ss_conf 689999789629776439983075269899999999851357777876603517877200366-4434510123467776
Q gi|254780435|r 30 YYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYPPS-NSTFKKGSTMTLDNAL 108 (336)
Q Consensus 30 ~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~~~~s-~~~l~~g~~~tv~dll 108 (336)
+..++|.+||++ ++.|+|+++||||++|+|+++.+++++++|+++||++|++++.....+++ .+.+.+|+.+|++||+
T Consensus 53 ~v~~~dl~tg~~-~~~n~~~~~~~AS~~Kl~~~~~~l~~v~~G~l~l~~~v~~~~~~~~~~~~~~~~~~~g~~~sl~dLl 131 (282)
T 3cjm_A 53 GISYLDLETGEQ-RSVNGQHEFYTASTIKVPLTMLVADTVASGQKKWTDLIPYNAEEDYEEGTGIIAYNIQPEYPLKTLQ 131 (282)
T ss_dssp EEEEEETTTCCE-EEESTTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEECCHHHHCCCSSCSGGGSCCSEEEHHHHH
T ss_pred EEEEEECCCCCE-EEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCCCCEEECCCCEEEHHHHH
T ss_conf 999998999988-8888998422188899999999999997499887772686189961589862572589826699999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHH
Q ss_conf 7677742358999997640111789999999999870983534412357646222256999999989876312---3311
Q gi|254780435|r 109 KLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDF---PQYM 185 (336)
Q Consensus 109 ~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~~~~tTa~Dla~l~~~~~~~~---p~~~ 185 (336)
++||+.|+|+||++|++++||+.. +|++..++|+.++.+. ..|.+|++|++.+..++..+. |...
T Consensus 132 ~~mi~~SdN~Aan~L~~~lGg~~~-----~~~~~~~~g~~~~~~~-------~~~~~T~~d~~~ll~~l~~~~~~~~~~~ 199 (282)
T 3cjm_A 132 EYAITYSDNIAKNMLYDTLGGDAK-----AKREMYQRYLHKTPSI-------EEPQFSSEDALVILQKLYTEKATKPDYQ 199 (282)
T ss_dssp HHHHHTCCHHHHHHHHHHTTCHHH-----HHHHHHHHHTSCCCCS-------SSCEECHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHCCCHH-----HHHHHHHCCCCCCCCC-------CCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 999984126999999998298499-----9999997057668875-------5677789999999999974877886899
Q ss_pred CCCCEEECCCCCEEEEECCCCC-CCCCCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHHHH-----HHHHHH
Q ss_conf 0123020001744786014565-6689711533212411200023456428868999983789866789-----999999
Q gi|254780435|r 186 HYFQIKGLEIKGKKYPNTNWAV-GTFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRN-----KVSASL 259 (336)
Q Consensus 186 ~~~~~~~~~~~~~~~~N~N~ll-~~~~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~r~-----~~~~~L 259 (336)
.+... -..... .+++- +-.++..+.|||+++.+ +|.++....++ ++|+|||.....+.+. +-++.+
T Consensus 200 ~l~~~-----l~~~~~-~~~l~~~lp~~~va~KtG~~~~~-~~d~giV~~~~-~yiiav~t~~~~~~~~~~~i~~is~~i 271 (282)
T 3cjm_A 200 AIYDS-----MKQSVF-HERMETPTTQGKVAHKIGSYDEF-IHDMGILETPH-PFALAIFTKGPDNAKSAAFIASVTDKL 271 (282)
T ss_dssp HHHHH-----HHSCSC-CCTTCCTTTTTSEEEEEEEETTE-EEEEEEECSSS-CEEEEEEEECSCHHHHHHHHHHHHHHH
T ss_pred HHHHH-----HHCCCC-CCCHHCCCCCCCEEEEECCCCCC-EEEEEEEECCC-CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999-----844778-73110258878068620265770-47899995799-889999947998078999999999999
Q ss_pred HHHHHHHCCC
Q ss_conf 9999851453
Q gi|254780435|r 260 LSMGFYNKTD 269 (336)
Q Consensus 260 l~~~f~~f~~ 269 (336)
++|.+++|+.
T Consensus 272 y~~~~~~~~~ 281 (282)
T 3cjm_A 272 WQLQVSEYPN 281 (282)
T ss_dssp HHHHHHSCCC
T ss_pred HHHHHHCCCC
T ss_conf 9977642799