HHsearch results for GI: 254780435 and protein with PDBid: 3ita_A

>3ita_A D-alanyl-D-alanine carboxypeptidase DACC; ppenicillin-binding protein, BP6, DD-carboxypeptidase, peptidoglycan, ampicillin, acyl-enzyme complex; HET: AIX AIC; 1.80A {Escherichia coli} PDB: 3it9_A* 3itb_A*
Probab=100.00  E-value=0  Score=566.61  Aligned_cols=316  Identities=31%  Similarity=0.356  Sum_probs=267.1

Q ss_pred             CCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH------CCCC
Q ss_conf             3578754478568999978962977643998307526989999999985135777787660351787720------0366
Q gi|254780435|r   19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE------YPPS   92 (336)
Q Consensus        19 ~~~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~------~~~s   92 (336)
                      ....+|.+.|++|+|||++||+|||+||+|+++||||+|||||+|+++|+++.|+++||++|++|++++.      .++|
T Consensus         4 ~~~~~P~i~a~aaiv~d~~tG~iL~~kn~~~~~~pASlTKlMTa~v~~e~i~~~~~~l~~~v~vs~~a~~~~~~~~~~~s   83 (352)
T 3ita_A            4 QTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSS   83 (352)
T ss_dssp             -CCCCCCCCSSEEEEEETTTCCEEEEESTTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCGGGSTTTCGGGTTSS
T ss_pred             CCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCCCC
T ss_conf             88889973215999999999979632590998622899999999999998763899978669946999851044556873


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf             44345101234677767677742358999997640111789999999999870983534412357646222256999999
Q gi|254780435|r   93 NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI  172 (336)
Q Consensus        93 ~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~~~~tTa~Dla~  172 (336)
                      .++|++|+++|++|||++||++|+||||++|||+++||+++||++||++|++|||+||||.|||||++++|||||+||++
T Consensus        84 ~~~l~~g~~~tv~dLL~~~li~SaNdAA~aLA~~i~Gs~~~Fv~~MN~kAkelG~~~T~f~np~Gl~~~~~~tta~Dla~  163 (352)
T 3ita_A           84 VMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMAL  163 (352)
T ss_dssp             CCCCCTTCEEEHHHHHHHHHTTCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCTTCBCCCSSCCCCTTCBBCHHHHHH
T ss_pred             EEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             35413899999999999988751529999998752899999999999999984899821557777787556346999999


Q ss_pred             HHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCC-CCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHH
Q ss_conf             98987631233110123020001744786014565668-97115332124112000234564288689999837898667
Q gi|254780435|r  173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT  251 (336)
Q Consensus       173 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll~~~-~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~  251 (336)
                      |++++++++|++..+++.+.+.+.++.+.|+|++|+.+ ++++|+|||||++||+||+++++|||+|+|+||||+++...
T Consensus       164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~n~ll~~~~~~i~G~KTG~t~~aG~~lv~~a~~~g~~~i~Vvlg~~~~~~  243 (352)
T 3ita_A          164 LGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI  243 (352)
T ss_dssp             HHHHHHHHCHHHHGGGGCCEEEETTEEEECCCGGGGCSSCEEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEESSHHH
T ss_pred             HHHHHHHCCCCEEEEEEEEEEECCCEECCCCCCHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCEEEEEEEECCCCHHH
T ss_conf             99997336821077500678704861136767001167827556998874147860899998599069999967998778


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCC---CCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             89999999999985145320234554552---01455542346-543202113455432332113444454426811200
Q gi|254780435|r  252 RNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPN-ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT  327 (336)
Q Consensus       252 r~~~~~~Ll~~~f~~f~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~  327 (336)
                      ||.++++|+||+|++|....++.+.....   .+.+....++. ...++..............+.........+|+++++
T Consensus       244 r~~d~~~Ll~~~f~~~~~~~~~~~~~~~~~~~V~~g~~~~v~l~~~~~~~~~lpk~~~~~~~~~i~~~~~~l~APVkkG~  323 (352)
T 3ita_A          244 RFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQ  323 (352)
T ss_dssp             HHHHHHHHHHHHHHHEEEECSSCTTCCSEEEEEESBSSSEEEEECGGGCCEEEETTCGGGEEEEEEESSSSEESCBCTTC
T ss_pred             HHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEECCCCCC
T ss_conf             89999999999975348865301444443104753765389999788779999889756628999987883440568998


Q ss_pred             ECCCEEC
Q ss_conf             0133010
Q gi|254780435|r  328 LLKNKIT  334 (336)
Q Consensus       328 ~~~~~i~  334 (336)
                      .+|+...
T Consensus       324 ~VG~l~v  330 (352)
T 3ita_A          324 VVGTIDF  330 (352)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
T ss_conf             9999999