HHsearch results for GI: 254780435 and protein with PDBid: 3ita_A
>3ita_A D-alanyl-D-alanine carboxypeptidase DACC; ppenicillin-binding protein, BP6, DD-carboxypeptidase, peptidoglycan, ampicillin, acyl-enzyme complex; HET: AIX AIC; 1.80A {Escherichia coli} PDB: 3it9_A* 3itb_A*
Probab=100.00 E-value=0 Score=566.61 Aligned_cols=316 Identities=31% Similarity=0.356 Sum_probs=267.1
Q ss_pred CCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH------CCCC
Q ss_conf 3578754478568999978962977643998307526989999999985135777787660351787720------0366
Q gi|254780435|r 19 FLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASE------YPPS 92 (336)
Q Consensus 19 ~~~~~~~~~a~~~i~~d~~tG~iL~~kn~~~~~~~AS~tKlmTa~~~~~~i~~g~~~ld~~v~vs~~~~~------~~~s 92 (336)
....+|.+.|++|+|||++||+|||+||+|+++||||+|||||+|+++|+++.|+++||++|++|++++. .++|
T Consensus 4 ~~~~~P~i~a~aaiv~d~~tG~iL~~kn~~~~~~pASlTKlMTa~v~~e~i~~~~~~l~~~v~vs~~a~~~~~~~~~~~s 83 (352)
T 3ita_A 4 QTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSS 83 (352)
T ss_dssp -CCCCCCCCSSEEEEEETTTCCEEEEESTTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECCGGGSTTTCGGGTTSS
T ss_pred CCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHCCCCCCCCC
T ss_conf 88889973215999999999979632590998622899999999999998763899978669946999851044556873
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 44345101234677767677742358999997640111789999999999870983534412357646222256999999
Q gi|254780435|r 93 NSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAI 172 (336)
Q Consensus 93 ~~~l~~g~~~tv~dll~~~li~S~Ndaa~aLAe~i~Gs~~~Fv~~MN~~a~~lG~~~T~f~n~~Gl~~~~~~tTa~Dla~ 172 (336)
.++|++|+++|++|||++||++|+||||++|||+++||+++||++||++|++|||+||||.|||||++++|||||+||++
T Consensus 84 ~~~l~~g~~~tv~dLL~~~li~SaNdAA~aLA~~i~Gs~~~Fv~~MN~kAkelG~~~T~f~np~Gl~~~~~~tta~Dla~ 163 (352)
T 3ita_A 84 VMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMAL 163 (352)
T ss_dssp CCCCCTTCEEEHHHHHHHHHTTCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHTTCTTCBCCCSSCCCCTTCBBCHHHHHH
T ss_pred EEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 35413899999999999988751529999998752899999999999999984899821557777787556346999999
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCC-CCEEEEEEECCHHHHHEEEEEEEECCEEEEEEEECCCCHHH
Q ss_conf 98987631233110123020001744786014565668-97115332124112000234564288689999837898667
Q gi|254780435|r 173 LSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVGTF-LGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNT 251 (336)
Q Consensus 173 l~~~~~~~~p~~~~~~~~~~~~~~~~~~~N~N~ll~~~-~gv~G~KTG~t~~AG~~lv~~a~~~g~~li~Vvlg~~~~~~ 251 (336)
|++++++++|++..+++.+.+.+.++.+.|+|++|+.+ ++++|+|||||++||+||+++++|||+|+|+||||+++...
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~n~ll~~~~~~i~G~KTG~t~~aG~~lv~~a~~~g~~~i~Vvlg~~~~~~ 243 (352)
T 3ita_A 164 LGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI 243 (352)
T ss_dssp HHHHHHHHCHHHHGGGGCCEEEETTEEEECCCGGGGCSSCEEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEEESSHHH
T ss_pred HHHHHHHCCCCEEEEEEEEEEECCCEECCCCCCHHCCCCCEEEEEEEEEECCCCCEEEEEEEECCEEEEEEEECCCCHHH
T ss_conf 99997336821077500678704861136767001167827556998874147860899998599069999967998778
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCC---CCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 89999999999985145320234554552---01455542346-543202113455432332113444454426811200
Q gi|254780435|r 252 RNKVSASLLSMGFYNKTDRKKINYIIKDF---YQQNLSNEVPN-ISEEVCTTQKEIINYNTQMKEAKDKESHFIDFEKIT 327 (336)
Q Consensus 252 r~~~~~~Ll~~~f~~f~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 327 (336)
||.++++|+||+|++|....++.+..... .+.+....++. ...++..............+.........+|+++++
T Consensus 244 r~~d~~~Ll~~~f~~~~~~~~~~~~~~~~~~~V~~g~~~~v~l~~~~~~~~~lpk~~~~~~~~~i~~~~~~l~APVkkG~ 323 (352)
T 3ita_A 244 RFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQ 323 (352)
T ss_dssp HHHHHHHHHHHHHHHEEEECSSCTTCCSEEEEEESBSSSEEEEECGGGCCEEEETTCGGGEEEEEEESSSSEESCBCTTC
T ss_pred HHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCEEECCCCCC
T ss_conf 89999999999975348865301444443104753765389999788779999889756628999987883440568998
Q ss_pred ECCCEEC
Q ss_conf 0133010
Q gi|254780435|r 328 LLKNKIT 334 (336)
Q Consensus 328 ~~~~~i~ 334 (336)
.+|+...
T Consensus 324 ~VG~l~v 330 (352)
T 3ita_A 324 VVGTIDF 330 (352)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
T ss_conf 9999999