PSIBLAST alignment of GI: 254780435 and protein with PDB id: 1hd8
>gi|17942531|pdb|1HD8|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of Penicillin-Binding Protein 5 At 2.3 A Resolution Length = 363
>gi|28374028|pdb|1NJ4|A Chain A, Crystal Structure Of A Deacylation-Defective Mutant Of Penicillin-Binding Protein 5 At 1.9 A Resolution Length = 363
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 11/330 (3%)
Query: 14 SNIFPFLSIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKK 73
NI + Y L+D N+G V+AE D +PASLTK+MT+YV+ +K K
Sbjct: 3 LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGK 62
Query: 74 AMLTTPITISKNASEYPPSN------STFKKGSTMTLDNALKLLIVKSANDIAVAIAESL 127
T +TI +A K G + + ++ + ++S ND VA+A+
Sbjct: 63 FKETDLVTIGNDAWATGNPVFKGSSLMFLKPGMQVPVSQLIRDINLQSGNDACVAMADFA 122
Query: 128 CKTEKKFVQHMNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHY 187
++ FV MN+ LGL THF HG+ G Y++ARDMA++ + D P
Sbjct: 123 AGSQDAFVGLMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSI 182
Query: 188 FQIKGLEIKGKKYPNTNWAVGTFL-GADGMKTGFTCASGFNIVASAIQGDQSLIAVILGA 246
++ K G + N N + DG+KTG T +G+N+VASA +G LI+ ++G
Sbjct: 183 YKEKEFTFNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGG 242
Query: 247 LDRNTRNKVSASLLSMGFYNKTDRKKINYII----KDFYQQNLSNEVPNISEEVCTTQKE 302
R S LL+ GF + + + + + ++V T
Sbjct: 243 RTFKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPR 302
Query: 303 IINYNTQMKEAKDKESHFIDFEKITLLKNK 332
+ + + +K ++
Sbjct: 303 GRMKDLKASYVLNSSELHAPLQKNQVVGTI 332