PSIBLAST alignment of GI: 254780435 and protein with PDB id: 3a3j
>gi|281500691|pdb|3A3J|A Chain A, Crystal Structures Of Penicillin Binding Protein 5 From Haemophilus Influenzae Length = 344
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 9/323 (2%)
Query: 21 SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
Y L+D N+G ++ PD PASLTK+MT+YVV LK+ K T +
Sbjct: 2 VTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMV 61
Query: 81 TISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
TI ++A S + +++ + + +IV S ND VA+AE + FV+
Sbjct: 62 TIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVET 121
Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
MN + GL T+F HG+ Y++ARDMAI+ I D P+ + K
Sbjct: 122 MNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKDFTFNK 181
Query: 198 KKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTRNKV 255
K PN N + DGMKTG T +G+N+VASA + LI+V++G R
Sbjct: 182 IKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVE 241
Query: 256 SASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
S LL GF N K + + Y + ++ + T + + +
Sbjct: 242 SKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFMDHFITIPKGKQSEVKAR 301
Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
++ K ++ +
Sbjct: 302 YELADKNLQAPLAKGQVIGKVVY 324