PSIBLAST alignment of GI: 254780435 and protein with PDB id: 3a3j

>gi|281500691|pdb|3A3J|A Chain A, Crystal Structures Of Penicillin Binding Protein 5 From Haemophilus Influenzae Length = 344
 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 88/323 (27%), Positives = 138/323 (42%), Gaps = 9/323 (2%)

Query: 21  SIAETNKLPYYTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPI 80
                     Y L+D N+G ++    PD    PASLTK+MT+YVV   LK+ K   T  +
Sbjct: 2   VTPPQITAQTYVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMV 61

Query: 81  TISKNASEYP---PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQH 137
           TI ++A        S       + +++ +  + +IV S ND  VA+AE +      FV+ 
Sbjct: 62  TIGESAWGRNFPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVET 121

Query: 138 MNNTSKNLGLSATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKG 197
           MN   +  GL  T+F   HG+     Y++ARDMAI+   I  D P+    +  K      
Sbjct: 122 MNKYVQQFGLKNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKDFTFNK 181

Query: 198 KKYPNTN-WAVGTFLGADGMKTGFTCASGFNIVASA-IQGDQSLIAVILGALDRNTRNKV 255
            K PN N       +  DGMKTG T  +G+N+VASA    +  LI+V++G      R   
Sbjct: 182 IKQPNRNGLLWDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVE 241

Query: 256 SASLLSMGFYNKTDRKKINYIIKD----FYQQNLSNEVPNISEEVCTTQKEIINYNTQMK 311
           S  LL  GF N    K +    +      Y  + ++       +   T  +      + +
Sbjct: 242 SKKLLQWGFANFETFKTLEAGKEISEQRVYYGDKNSVKLGAFMDHFITIPKGKQSEVKAR 301

Query: 312 EAKDKESHFIDFEKITLLKNKIT 334
                ++      K  ++   + 
Sbjct: 302 YELADKNLQAPLAKGQVIGKVVY 324