RPSBLAST alignment of GI: 254780435 and protein with PDBid: 1m40
>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ... Length = 263
Score = 144 bits (365), Expect = 2e-35
Identities = 34/233 (14%), Positives = 67/233 (28%), Gaps = 2/233 (0%)
Query: 31 YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNASEYP 90
Y LD N+G ++ P+ + S K++ V S + + L I S+N
Sbjct: 21 YIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEY 80
Query: 91 PSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEK--KFVQHMNNTSKNLGLS 148
+ MT+ I S N A + ++ ++ F+ +M + L
Sbjct: 81 SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW 140
Query: 149 ATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAVG 208
A + T A L + + Q+ K +
Sbjct: 141 EPELNEAIPNDERDTTTPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSAL 200
Query: 209 TFLGADGMKTGFTCASGFNIVASAIQGDQSLIAVILGALDRNTRNKVSASLLS 261
K+G I+A+ + V++ ++
Sbjct: 201 PAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA 253