RPSBLAST alignment of GI: 254780435 and protein with PDBid: 3a3j

>3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae} Length = 344

 Score =  165 bits (418), Expect = 1e-41
 Identities = 82/241 (34%), Positives = 121/241 (50%), Gaps = 5/241 (2%)

Query: 31  YTLLDTNTGHVIAENYPDHPWNPASLTKLMTAYVVFSFLKEKKAMLTTPITISKNA---S 87
           Y L+D N+G ++    PD    PASLTK+MT+YVV   LK+ K   T  +TI ++A   +
Sbjct: 12  YVLMDYNSGAILTALNPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIGESAWGRN 71

Query: 88  EYPPSNSTFKKGSTMTLDNALKLLIVKSANDIAVAIAESLCKTEKKFVQHMNNTSKNLGL 147
               S       + +++ +  + +IV S ND  VA+AE +      FV+ MN   +  GL
Sbjct: 72  FPDSSKMFLDLNTQVSVADLNRGVIVVSGNDATVALAEHISGNVPNFVETMNKYVQQFGL 131

Query: 148 SATHFMNAHGVVQHGHYTTARDMAILSWRIKTDFPQYMHYFQIKGLEIKGKKYPNTNWAV 207
             T+F   HG+     Y++ARDMAI+   I  D P+    +  K       K PN N  +
Sbjct: 132 KNTNFTTPHGLDDPNQYSSARDMAIIGAHIIRDLPEEYKIYSEKDFTFNKIKQPNRNGLL 191

Query: 208 -GTFLGADGMKTGFTCASGFNIVA-SAIQGDQSLIAVILGALDRNTRNKVSASLLSMGFY 265
               +  DGMKTG T  +G+N+VA +    +  LI+V++G      R   S  LL  GF 
Sbjct: 192 WDKTINVDGMKTGHTSQAGYNLVASATTSNNMRLISVVMGVPTYKGREVESKKLLQWGFA 251

Query: 266 N 266
           N
Sbjct: 252 N 252