HHsearch alignment for GI: 254780436 and conserved domain: COG0457
>COG0457 NrfG FOG: TPR repeat [General function prediction only].
Probab=98.30 E-value=3.9e-06 Score=50.16 Aligned_cols=182 Identities=26% Similarity=0.330 Sum_probs=98.9
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHCC
Q ss_conf 9999999981998999999999998--168998999999999997298522221111111111111111211000-0000
Q gi|254780436|r 39 IEGCSSLFPSMGRRVNIDSLTAVIR--AHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRAL-IRYK 115 (298)
Q Consensus 39 ~~~~~~~~~~~~~~~Ai~~~~~al~--~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~-~~~~ 115 (298)
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (291)
T COG0457 63 LLLALALLKLGRLEEALELLEKALELELLPNLAEALLNLGLLLEALGKYEEALELLEKALALDPDPDLAEALLALGALYE 142 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 99888999866379999989998877535235999999999999984399999999998733656426999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11222211111122221111111222222222221111111111121111222222222222222211111111122212
Q gi|254780436|r 116 MGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIED 195 (298)
Q Consensus 116 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (298)
T Consensus 143 ~~~~~~a~~~~~~~~~~~~~------------------------------------------------------------ 162 (291)
T COG0457 143 LGDYEEALELYEKALELDPE------------------------------------------------------------ 162 (291)
T ss_pred HHHHHHHHHHHHHHHHHCHH------------------------------------------------------------
T ss_conf 64099999999999874944------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 111111112221222222222221111111122211122323338-8899999999999849989999999999861799
Q gi|254780436|r 196 FSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPK-KASFWFNGGMVYEMQGSYANAVKYYKKALSVDSR 274 (298)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~ 274 (298)
T Consensus 163 --------~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 234 (291)
T COG0457 163 --------LNELAEALLALGALLEALGRYEEALELLEKALKLNPDDDAEALLNLGLLYLKLGKYEEALEYYEKALELDPD 234 (291)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf --------467899999999898870339999999999986280122799999999998752599999999999872910
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 98999999999999
Q gi|254780436|r 275 YYRAKNGILRISQD 288 (298)
Q Consensus 275 ~~~a~~~la~i~~~ 288 (298)
T Consensus 235 ~~~~~~~~~~~~~~ 248 (291)
T COG0457 235 NAEALYNLALLLLE 248 (291)
T ss_pred CHHHHHHHHHHHHH
T ss_conf 17999999999883