HHsearch alignment for GI: 254780436 and conserved domain: COG4235
>COG4235 Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].
Probab=98.12 E-value=5.2e-06 Score=49.46 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=80.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHC
Q ss_conf 1111111122212222222222211111111222111223233388899999999999849---9899999999998617
Q gi|254780436|r 196 FSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQG---SYANAVKYYKKALSVD 272 (298)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~kAl~l~ 272 (298)
T Consensus 145 Le~~L~~nP~-d~egW~~Lg~~ym~~~~~~~A~~AY~~A~rL~g~n~~~~~g~aeaL~~~a~~~~ta~a~~ll~~al~~D 223 (287)
T COG4235 145 LETHLQQNPG-DAEGWDLLGRAYMALGRASDALLAYRNALRLAGDNPEILLGLAEALYYQAGQQMTAKARALLRQALALD 223 (287)
T ss_pred HHHHHHHCCC-CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf 9999984988-724499999999984443479999999987379988999999999999538844499999999998439
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999899999999999974288874
Q gi|254780436|r 273 SRYYRAKNGILRISQDLSSTVNEV 296 (298)
Q Consensus 273 P~~~~a~~~la~i~~~lg~~~~~~ 296 (298)
T Consensus 224 ~~~iral~lLA~~afe~g~~~~A~ 247 (287)
T COG4235 224 PANIRALSLLAFAAFEQGDYAEAA 247 (287)
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 732889999999999814599999