HHsearch alignment for GI: 254780436 and conserved domain: COG5010

>COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion].
Probab=98.75  E-value=5.3e-09  Score=65.71  Aligned_cols=104  Identities=16%  Similarity=0.173  Sum_probs=56.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             12221211111111222122222222222111111112221112232333888999999999998499899999999998
Q gi|254780436|r  190 EKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKAL  269 (298)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl  269 (298)
T Consensus       117 ~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~~~nNlgms~~L~gd~~~A~~lll~a~  195 (257)
T COG5010         117 GEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPSIANNLGMSLLLRGDLEDAETLLLPAY  195 (257)
T ss_pred             HHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             8899999998436999-746666778999973675677899999998425884466658999997277989999999998


Q ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             6179998999999999999742888
Q gi|254780436|r  270 SVDSRYYRAKNGILRISQDLSSTVN  294 (298)
Q Consensus       270 ~l~P~~~~a~~~la~i~~~lg~~~~  294 (298)
T Consensus       196 l~~~ad~~v~~NLAl~~~~~g~~~~  220 (257)
T COG5010         196 LSPAADSRVRQNLALVVGLQGDFRE  220 (257)
T ss_pred             HCCCCCHHHHHHHHHHHHHCCCHHH
T ss_conf             6788763899989999840488677