HHsearch alignment for GI: 254780436 and conserved domain: KOG4642

Probab=98.26  E-value=8.9e-07  Score=53.62  Aligned_cols=81  Identities=11%  Similarity=0.030  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99998999999972319-99999999999819989999999999981689989999999999972985222211111111
Q gi|254780436|r   19 SKRRGYYSLLSVLVVSV-ILLIEGCSSLFPSMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALD   97 (298)
Q Consensus        19 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~   97 (298)
T Consensus        27 ~~ai~~y~raI~~nP~~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~~~l~s~~~~eaI~~Lqra~s  106 (284)
T KOG4642          27 DDAIDCYSRAICINPTVASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQWLLQSKGYDEAIKVLQRAYS  106 (284)
T ss_pred             CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             46899999988548973024454788888762002666617889860728789999988888752366078999999998


Q ss_pred             CC
Q ss_conf             11
Q gi|254780436|r   98 LN   99 (298)
Q Consensus        98 ~~   99 (298)
T Consensus       107 l~  108 (284)
T KOG4642         107 LL  108 (284)
T ss_pred             HH
T ss_conf             87