HHsearch alignment for GI: 254780436 and conserved domain: PRK02603

>PRK02603 photosystem I assembly protein Ycf3; Provisional.
Probab=99.52  E-value=8.1e-15  Score=97.27  Aligned_cols=82  Identities=24%  Similarity=0.413  Sum_probs=37.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             222222221111111122211122323338--8-8999999999998499899999999998617999899999999999
Q gi|254780436|r  211 YNGRGISYLATKNYDSALEDFKFAINLDPK--K-ASFWFNGGMVYEMQGSYANAVKYYKKALSVDSRYYRAKNGILRISQ  287 (298)
Q Consensus       211 ~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~--~-~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~~~~a~~~la~i~~  287 (298)
T Consensus        38 Yy~~G~~~q~~G~Y~EAle~Y~kAL~Le~dp~D~s~ilyNiGlIY~~~G~~~kAie~Y~kALeiNP~~~~AlNNlgvIY~  117 (172)
T PRK02603         38 YYRDGMSAQNDGDYAEALENYEEALKLEEDPNDRSYILYNMAIIYASNGEHDKALETYHQALELNPKQPSALNNIAVIYH  117 (172)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             99722577745799999999999872778962089999779999998699889999999999868997899999999999


Q ss_pred             HHHHH
Q ss_conf             97428
Q gi|254780436|r  288 DLSST  292 (298)
Q Consensus       288 ~lg~~  292 (298)
T Consensus       118 k~G~~  122 (172)
T PRK02603        118 KRGRK  122 (172)
T ss_pred             HHHHH
T ss_conf             98599