HHsearch alignment for GI: 254780436 and conserved domain: PRK10049

>PRK10049 pgaA outer membrane protein PgaA; Provisional.
Probab=97.97  E-value=1e-05  Score=47.88  Aligned_cols=91  Identities=15%  Similarity=0.113  Sum_probs=71.2

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
Q ss_conf             19989999999999981689989999999999972985222211111111111111112110000000112222111111
Q gi|254780436|r   48 SMGRRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVPMAIRDYG  127 (298)
Q Consensus        48 ~~~~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  127 (298)
T Consensus        78 ag~d~~v~~~~~~~~~~~~lp~~~l~~~Aka~Rn~kq~~~Al~ly~~~~~~~P~n~d~~lGlalt~Ada~~~~~Al~~~~  157 (818)
T PRK10049         78 AGQDQEVITVYERYQSHMQLPARGLAAAARAYRNLKQWQNSLTLWQKALSLEPQNKDYQSGQILTLADAGHYDEALVKAK  157 (818)
T ss_pred             CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             47777999999961888889979999999998635546779999999850299994078999999986388699999999


Q ss_pred             CCCCCCCCCCC
Q ss_conf             22221111111
Q gi|254780436|r  128 TALKINPDYDV  138 (298)
Q Consensus       128 ~~~~~~~~~~~  138 (298)
T Consensus       158 ~~~~~~p~~~~  168 (818)
T PRK10049        158 QLVAGAPDVAN  168 (818)
T ss_pred             HHHHHCCCHHH
T ss_conf             98762897678