HHsearch alignment for GI: 254780436 and conserved domain: PRK10866
>PRK10866 outer membrane protein assembly complex subunit YfiO; Provisional.
Probab=98.09 E-value=2.3e-06 Score=51.39 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 3199999999999981998999999999998168998---999999999997298522221111111111111111211-
Q gi|254780436|r 33 VSVILLIEGCSSLFPSMGRRVNIDSLTAVIRAHPSDP---EGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYAN- 108 (298)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~Ai~~~~~al~~~P~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~- 108 (298)
T Consensus 30 ~~~~~~Y~~A~~~~~~~~y~~A~~~fe~l~~~yP~s~~A~qA~L~~ayayy~~~~y~~A~~~~~rFi~lyP~~~~v~Ya~ 109 (243)
T PRK10866 30 NPPNEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVM 109 (243)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 99999999999999878999999999999986899767899999999998730778999999999998678999738999
Q ss_pred --CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --000000011222211111122221111111222222222221111111111121111222222222222222211111
Q gi|254780436|r 109 --RALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMR 186 (298)
Q Consensus 109 --~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (298)
T Consensus 110 Yl~gl~~~~~~~~--~---~~~~~~~~~~~-------------rD~~~~~~A~~~f~~li~~yP~S~Ya~---------- 161 (243)
T PRK10866 110 YMRGLTNMALDDS--A---LQGFFGVDRSD-------------RDPQHARAAFSDFSKLVRGYPNSQYTT---------- 161 (243)
T ss_pred HHHHHHHHHCCHH--H---HHHHHCCCHHH-------------CCHHHHHHHHHHHHHHHHHCCCCHHHH----------
T ss_conf 9988987740135--8---88874325643-------------076999999999999998789984589----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 111122212111111112221222222222221111111122211122323338---88999999999998499899999
Q gi|254780436|r 187 GEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPK---KASFWFNGGMVYEMQGSYANAVK 263 (298)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~---~~~~~~~lg~~~~~~g~~~~A~~ 263 (298)
T Consensus 162 ----dA~---~r~~~lrn-~LA~~El~Va~fY~kr~~y~AAi~R~~~vi~~Yp~t~~~~eAL~~l~eaY~~Lgl~~~A~~ 233 (243)
T PRK10866 162 ----DAT---KRLVFLKD-RLAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQADK 233 (243)
T ss_pred ----HHH---HHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf ----999---99999999-9999999999999992656999999999997689996339999999999998699789999
Q ss_pred HHHHHHHHC
Q ss_conf 999998617
Q gi|254780436|r 264 YYKKALSVD 272 (298)
Q Consensus 264 ~~~kAl~l~ 272 (298)
T Consensus 234 ~-~~vL~~N 241 (243)
T PRK10866 234 V-AKIIAAN 241 (243)
T ss_pred H-HHHHHHH
T ss_conf 9-9999612