HHsearch alignment for GI: 254780436 and conserved domain: PRK10866

>PRK10866 outer membrane protein assembly complex subunit YfiO; Provisional.
Probab=98.09  E-value=2.3e-06  Score=51.39  Aligned_cols=203  Identities=14%  Similarity=0.079  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf             3199999999999981998999999999998168998---999999999997298522221111111111111111211-
Q gi|254780436|r   33 VSVILLIEGCSSLFPSMGRRVNIDSLTAVIRAHPSDP---EGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYAN-  108 (298)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~Ai~~~~~al~~~P~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~-  108 (298)
T Consensus        30 ~~~~~~Y~~A~~~~~~~~y~~A~~~fe~l~~~yP~s~~A~qA~L~~ayayy~~~~y~~A~~~~~rFi~lyP~~~~v~Ya~  109 (243)
T PRK10866         30 NPPNEIYATAQQKLQDGNWKQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFMRLNPTHPNIDYVM  109 (243)
T ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf             99999999999999878999999999999986899767899999999998730778999999999998678999738999


Q ss_pred             --CCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             --000000011222211111122221111111222222222221111111111121111222222222222222211111
Q gi|254780436|r  109 --RALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMR  186 (298)
Q Consensus       109 --~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (298)
T Consensus       110 Yl~gl~~~~~~~~--~---~~~~~~~~~~~-------------rD~~~~~~A~~~f~~li~~yP~S~Ya~----------  161 (243)
T PRK10866        110 YMRGLTNMALDDS--A---LQGFFGVDRSD-------------RDPQHARAAFSDFSKLVRGYPNSQYTT----------  161 (243)
T ss_pred             HHHHHHHHHCCHH--H---HHHHHCCCHHH-------------CCHHHHHHHHHHHHHHHHHCCCCHHHH----------
T ss_conf             9988987740135--8---88874325643-------------076999999999999998789984589----------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             111122212111111112221222222222221111111122211122323338---88999999999998499899999
Q gi|254780436|r  187 GEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPK---KASFWFNGGMVYEMQGSYANAVK  263 (298)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~---~~~~~~~lg~~~~~~g~~~~A~~  263 (298)
T Consensus       162 ----dA~---~r~~~lrn-~LA~~El~Va~fY~kr~~y~AAi~R~~~vi~~Yp~t~~~~eAL~~l~eaY~~Lgl~~~A~~  233 (243)
T PRK10866        162 ----DAT---KRLVFLKD-RLAKYEYSVAEYYTKRGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQLNAQADK  233 (243)
T ss_pred             ----HHH---HHHHHHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             ----999---99999999-9999999999999992656999999999997689996339999999999998699789999


Q ss_pred             HHHHHHHHC
Q ss_conf             999998617
Q gi|254780436|r  264 YYKKALSVD  272 (298)
Q Consensus       264 ~~~kAl~l~  272 (298)
T Consensus       234 ~-~~vL~~N  241 (243)
T PRK10866        234 V-AKIIAAN  241 (243)
T ss_pred             H-HHHHHHH
T ss_conf             9-9999612