HHsearch alignment for GI: 254780436 and conserved domain: PRK11906
>PRK11906 transcriptional regulator; Provisional.
Probab=96.22 E-value=0.0028 Score=34.64 Aligned_cols=55 Identities=18% Similarity=0.124 Sum_probs=27.5
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 1112221112232333888999999999998499899999999998617999899
Q gi|254780436|r 224 YDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVDSRYYRA 278 (298)
Q Consensus 224 ~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~~~~a 278 (298)
T Consensus 354 ~~Vs~~LFeQA~ll~p~s~di~yy~~~~~F~~g~leea~~~I~ksL~leP~r~~a 408 (458)
T PRK11906 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 (458)
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHCC
T ss_conf 6698999987414699863312133353563374088999999986149401002