HHsearch alignment for GI: 254780436 and conserved domain: PRK12370

>PRK12370 invasion protein regulator; Provisional.
Probab=98.71  E-value=1.6e-09  Score=68.55  Aligned_cols=180  Identities=13%  Similarity=0.007  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
Q ss_conf             89999999999981689989999999999972985---------222211111111111111112110000000112222
Q gi|254780436|r   51 RRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDF---------EKALLDFQSALDLNPRYYKVYANRALIRYKMGDVPM  121 (298)
Q Consensus        51 ~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~---------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~  121 (298)
T Consensus       277 n~~A~~LF~~Av~~dP~fA~AyA~la~cy~q~a~l~~~d~~~~~~~A~~~AeravEldp~dp~a~~~lg~~~~L~~d~~~  356 (553)
T PRK12370        277 LQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIV  356 (553)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
T ss_conf             99999999998733977446678789999976340368828899999999999874387887888999999872355224


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             11111122221111111222222222221111111111121111222222222222222211111111122212111111
Q gi|254780436|r  122 AIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAIS  201 (298)
Q Consensus       122 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (298)
T Consensus       357 a~~~f~rA~~L~Pnsa~~~Y~~~W~~--~maGr~~ea~~~i~~a~~LdP~~~~~~~~~l~~~~~~~~~d~a~~l~~~~~~  434 (553)
T PRK12370        357 GSLLFKQANLLSPISADIKYYYGWNL--FMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYHTGIDDAIRLGDELRS  434 (553)
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             47999876425998425799999999--9758689999999998835986520279999999984231079999998625


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1122212222222222211111111222111
Q gi|254780436|r  202 LYSSISPDYYNGRGISYLATKNYDSALEDFK  232 (298)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  232 (298)
T Consensus       435 q~~~~~~~~~s~~~m~~~~~g~~~~a~~~~~  465 (553)
T PRK12370        435 QHLQDNPILLSMQVMFLSLKGKHELARKLTK  465 (553)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             0778783699999999973383899999998