HHsearch alignment for GI: 254780436 and conserved domain: PRK12370

>PRK12370 invasion protein regulator; Provisional.
Probab=98.55  E-value=2.3e-08  Score=62.27  Aligned_cols=254  Identities=12%  Similarity=0.077  Sum_probs=147.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCC---------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf             9999899999997231999999999999-8199---------89999999999981689989999999999972985222
Q gi|254780436|r   19 SKRRGYYSLLSVLVVSVILLIEGCSSLF-PSMG---------RRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKA   88 (298)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~Ai~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A   88 (298)
T Consensus       278 ~~A~~LF~~Av~~dP~fA~AyA~la~cy~q~a~l~~~d~~~~~~~A~~~AeravEldp~dp~a~~~lg~~~~L~~d~~~a  357 (553)
T PRK12370        278 QQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVG  357 (553)
T ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH
T ss_conf             99999999987339774466787899999763403688288999999999998743878878889999998723552244


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             21111111111111111211000000011222211111122221111111222222222221111111111121111222
Q gi|254780436|r   89 LLDFQSALDLNPRYYKVYANRALIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQL  168 (298)
Q Consensus        89 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (298)
T Consensus       358 ~~~f~rA~~L~Pnsa~~~Y~~~W~~~maGr~~ea~~~i~~a~~LdP~~~~~~~~~l~~~~~~--~~~d~a~~l~~~~~~q  435 (553)
T PRK12370        358 SLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYH--TGIDDAIRLGDELRSQ  435 (553)
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH--CCCCHHHHHHHHHHCC
T ss_conf             79998764259984257999999999758689999999998835986520279999999984--2310799999986250


Q ss_pred             CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC---CCCCCC-H
Q ss_conf             222222222-2222111111111222121111111122212222222222211111-111222111223---233388-8
Q gi|254780436|r  169 KTSDGRAWY-GRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLATKN-YDSALEDFKFAI---NLDPKK-A  242 (298)
Q Consensus       169 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~a~---~~~p~~-~  242 (298)
T Consensus       436 ~~~~~~~~~s~~~m~~~~~g~~~~a~~~~~~~-~~~~~~~~~~vn~~y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lp  514 (553)
T PRK12370        436 HLQDNPILLSMQVMFLSLKGKHELARKLTKEI-STQEITGLIAVNLLYAEYCQNSERALPTIREFLESEQRIDNNPGLLP  514 (553)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHC-CHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf             77878369999999997338389999999851-80311473245589999986005332689999976565214775011


Q ss_pred             --HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             --999999999998499899999999998617999
Q gi|254780436|r  243 --SFWFNGGMVYEMQGSYANAVKYYKKALSVDSRY  275 (298)
Q Consensus       243 --~~~~~lg~~~~~~g~~~~A~~~~~kAl~l~P~~  275 (298)
T Consensus       515 l~~~~~g~~~~~~~~~~~~~~~~~w~~~~~~dprl  549 (553)
T PRK12370        515 LVLVAHGEAIAEKMWNKFKNEDNIWFKRWKQDPRL  549 (553)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf             24765146689999998651004889887319433