HHsearch alignment for GI: 254780436 and conserved domain: TIGR00990
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor; InterPro: IPR005687 The mitochondrial protein translocase (MPT) family, which brings nuclearly encoded preproteins into mitochondria, is very complex with 19 currently identified protein constituents. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom70 proteins. ; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane.
Probab=99.70 E-value=4.1e-18 Score=115.15 Aligned_cols=244 Identities=21% Similarity=0.307 Sum_probs=128.5
Q ss_pred CHHHHHHHHHHHHHHCC-------CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
Q ss_conf 98999999999998168-------99899999999999729852222111111111111111121100000001122221
Q gi|254780436|r 50 GRRVNIDSLTAVIRAHP-------SDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRYKMGDVPMA 122 (298)
Q Consensus 50 ~~~~Ai~~~~~al~~~P-------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~a 122 (298)
T Consensus 337 ~y~~aa~~F~~~Ld~~nede~L~e~~A~~~~~~G~F~~L~~~~~~A~~Dl~K~IEL~P~~~qSYI~~A~~~~~~~~~~~~ 416 (649)
T TIGR00990 337 SYEEAARAFEKALDLGNEDEKLGEKEAIALNLRGIFKCLKGKHLEALADLSKSIELDPRVTQSYIKRASINLELGDPDKA 416 (649)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 27899999999840477511211455554412422233128815789987765422787317899999997415784225
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11111222211111112222222222211111111111211112222222222222222111111111222121111111
Q gi|254780436|r 123 IRDYGTALKINPDYDVAYIGRGNIYRDERYSDLQKAFADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISL 202 (298)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (298)
T Consensus 417 ~~~F~~Al~~~~~~~~~YYHRaQl~FI--~~~f~~A~KDy~K~~~LDp~~IF~~IQL~~~~Y~~~~~~~~~~~F~~~~~~ 494 (649)
T TIGR00990 417 EEDFDKALKKNSEDPDIYYHRAQLHFI--KGEFAQAGKDYQKSIDLDPDFIFSYIQLGVLQYKLGSIASSMALFRRCKKN 494 (649)
T ss_pred HHHHHHHHHCCCCCCCCEEHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf 889999986188987511017789988--730776754577664327110226899999886303443478999999861
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHCC
Q ss_conf 12221222222222221111111122211122323338------88999999999998---4998999999999986179
Q gi|254780436|r 203 YSSISPDYYNGRGISYLATKNYDSALEDFKFAINLDPK------KASFWFNGGMVYEM---QGSYANAVKYYKKALSVDS 273 (298)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~p~------~~~~~~~lg~~~~~---~g~~~~A~~~~~kAl~l~P 273 (298)
T Consensus 495 Fp~-~P~V~Nyy~ElL~D~~~F~~A~~~fD~AI~LE~~~~~~~~~v~PL~~Ka~~L~~nP~~~~f~EA~~L~EKA~~~DP 573 (649)
T TIGR00990 495 FPE-APDVYNYYGELLLDKNKFDEAIEKFDLAIELEKELKPIYVNVLPLINKALALFQNPWKQDFIEAENLLEKALIIDP 573 (649)
T ss_pred CCC-CCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 778-8885305788861436799999985689998750598076313367789997626521007899999888630488
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99899999999999974288874
Q gi|254780436|r 274 RYYRAKNGILRISQDLSSTVNEV 296 (298)
Q Consensus 274 ~~~~a~~~la~i~~~lg~~~~~~ 296 (298)
T Consensus 574 ~~~~A~~~lAQl~LQQ~~v~EAl 596 (649)
T TIGR00990 574 ECDIAVATLAQLLLQQGDVDEAL 596 (649)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 41478999999876234689999