RPSBLAST alignment for GI: 254780436 and conserved domain: TIGR02521

>gnl|CDD|131573 TIGR02521, type_IV_pilW, type IV pilus biogenesis/stability protein PilW. Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. Length = 234
 Score = 39.2 bits (92), Expect = 0.001
 Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 6/142 (4%)

Query: 51  RRVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRA 110
             V  ++L   +   P D   Y    + Y   G+ EKA   F+ AL LNP    V  N  
Sbjct: 47  LEVAKENLDKALEHDPDDYLAYLALALYYQQLGELEKAEDSFRRALTLNPNNGDVLNNYG 106

Query: 111 LIRYKMGDVPMAIRDYGTALKINPDYDVAYIGRGNI---YRDERYSDLQKAFADFDRAIQ 167
               + G    A++ +  A++ +P Y        N           D  KA     RA+Q
Sbjct: 107 TFLCQQGKYEQAMQQFEQAIE-DPLYPQPARSLENAGLCALKA--GDFDKAEKYLTRALQ 163

Query: 168 LKTSDGRAWYGRALVYQMRGEY 189
           +      +    A +Y +RG+Y
Sbjct: 164 IDPQRPESLLELAELYYLRGQY 185