RPSBLAST alignment for GI: 254780436 and conserved domain: TIGR02917
>gnl|CDD|163072 TIGR02917, PEP_TPR_lipo, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Length = 899
Score = 63.9 bits (156), Expect = 4e-11
Identities = 58/248 (23%), Positives = 98/248 (39%), Gaps = 37/248 (14%)
Query: 55 IDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRALIRY 114
I +L+ + P DP ++ G Y GDFEKA A +L+P + +
Sbjct: 349 IATLSPALGLDPDDPAALSLLGEAYLALGDFEKAAEYLAKATELDPENAAARTQLGISKL 408
Query: 115 KMGDVPMAIRDYGTALKINPDYDVA-------YIGRGNIYRDERYSDLQKAFADFDRAIQ 167
GD AI D TA +++P+ A Y+ G KA A + +
Sbjct: 409 SQGDPSEAIADLETAAQLDPELGRADLLLILSYLRSG---------QFDKALAAAKKLEK 459
Query: 168 LKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISLYSSISPDYYNGRGISYLA-----TK 222
+ + +Y +G+ K+ E F +A+ SI PD++ + LA
Sbjct: 460 KQPDNASLHNLLGAIYLGKGDLAKAREAFEKAL----SIEPDFF--PAAANLARIDIQEG 513
Query: 223 NYDSALEDFKFAINLDPKKASFWFNGGMVYEMQGSYANAVKYYKKALSVD---------- 272
N D A++ F+ + +DPK +Y G+ AV + +KA ++
Sbjct: 514 NPDDAIQRFEKVLTIDPKNLRAILALAGLYLRTGNEEEAVAWLEKAAELNPQEIEPALAL 573
Query: 273 SRYYRAKN 280
++YY K
Sbjct: 574 AQYYLGKG 581