RPSBLAST alignment for GI: 254780436 and conserved domain: KOG1127
>gnl|CDD|36342 KOG1127, KOG1127, KOG1127, TPR repeat-containing protein [RNA processing and modification]. Length = 1238
Score = 38.5 bits (89), Expect = 0.002
Identities = 41/252 (16%), Positives = 77/252 (30%), Gaps = 49/252 (19%)
Query: 52 RVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRAL 111
+ P+ + GV+ N DFE A F S L+P + AL
Sbjct: 833 ACAQHCFIKSRFSEPTCHCQWLNLGVLVLENQDFEHAEPAFSSVQSLDPLNLVQWLGEAL 892
Query: 112 IRYKMGDV--PMAIRDYGTALKIN----PDYDVAY------IGRGNIYRD-ERYSDLQKA 158
I +G + + + + L + + GNI + A
Sbjct: 893 IPEAVGRIIERLILFAHSDELCSKEGKAKKFQYWLCATEIHLQNGNIEESINTARKISSA 952
Query: 159 FADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISL---------YSSISPD 209
A+ + EY ++E ++ I L Y+ PD
Sbjct: 953 SLALSYYFLGHPQLCFAYAANGSTLEHLEEYRAALELATRLIGLLELKLDESQYNVAKPD 1012
Query: 210 YYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYE----------MQGSYA 259
G L+ ++SA K + W V E + +
Sbjct: 1013 A----GRLELSLGEFESA-------------KKASWKEWMEVDEDIRGTDLTLFFKNDFF 1055
Query: 260 NAVKYYKKALSV 271
++++++++ALS+
Sbjct: 1056 SSLEFFEQALSI 1067