RPSBLAST alignment for GI: 254780436 and conserved domain: KOG1127

>gnl|CDD|36342 KOG1127, KOG1127, KOG1127, TPR repeat-containing protein [RNA processing and modification]. Length = 1238
 Score = 38.5 bits (89), Expect = 0.002
 Identities = 41/252 (16%), Positives = 77/252 (30%), Gaps = 49/252 (19%)

Query: 52   RVNIDSLTAVIRAHPSDPEGYNVRGVVYGMNGDFEKALLDFQSALDLNPRYYKVYANRAL 111
                        + P+    +   GV+   N DFE A   F S   L+P     +   AL
Sbjct: 833  ACAQHCFIKSRFSEPTCHCQWLNLGVLVLENQDFEHAEPAFSSVQSLDPLNLVQWLGEAL 892

Query: 112  IRYKMGDV--PMAIRDYGTALKIN----PDYDVAY------IGRGNIYRD-ERYSDLQKA 158
            I   +G +   + +  +   L         +          +  GNI         +  A
Sbjct: 893  IPEAVGRIIERLILFAHSDELCSKEGKAKKFQYWLCATEIHLQNGNIEESINTARKISSA 952

Query: 159  FADFDRAIQLKTSDGRAWYGRALVYQMRGEYEKSIEDFSQAISL---------YSSISPD 209
                            A+       +   EY  ++E  ++ I L         Y+   PD
Sbjct: 953  SLALSYYFLGHPQLCFAYAANGSTLEHLEEYRAALELATRLIGLLELKLDESQYNVAKPD 1012

Query: 210  YYNGRGISYLATKNYDSALEDFKFAINLDPKKASFWFNGGMVYE----------MQGSYA 259
                 G   L+   ++SA             K + W     V E           +  + 
Sbjct: 1013 A----GRLELSLGEFESA-------------KKASWKEWMEVDEDIRGTDLTLFFKNDFF 1055

Query: 260  NAVKYYKKALSV 271
            ++++++++ALS+
Sbjct: 1056 SSLEFFEQALSI 1067