HHsearch alignment for GI: 254780438 and conserved domain: cd00429
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=93.83 E-value=0.73 Score=27.43 Aligned_cols=192 Identities=15% Similarity=0.163 Sum_probs=118.0
Q ss_pred CHHHHHHHHHHCCCCEEEEECCC----CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 98999999997499899982478----83348889999988740001367415888348568999998507212897101
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRP----DQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPD 100 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~----DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe 100 (261)
T Consensus 13 ~l~~~i~~~~~~g~d~lHiDimDG~Fvpn~t~g~~~v~~i~~~t~--~-~~DvHLMv~~P~~~i~~~~~~g~d~I~~H~E 89 (211)
T cd00429 13 NLGEELKRLEEAGADWIHIDVMDGHFVPNLTFGPPVVKALRKHTD--L-PLDVHLMVENPERYIEAFAKAGADIITFHAE 89 (211)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCC--C-CEEEEEEECCHHHHHHHHHHHCCCEEEECCC
T ss_conf 999999999976999899957579727866759899999987579--9-7058998718877699999709988998643
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 65553335782213337889999986202696389972544441479999740661465112111024443564336668
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLN 180 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~ 180 (261)
T Consensus 90 ~~---------------~~~~~~i~~ik~~g~~~Glal~p~T~~~~l~~~l~~-~D~vliMtV~P--Gf~GQ~f~~~~~~ 151 (211)
T cd00429 90 AT---------------DHLHRTIQLIKELGMKAGVALNPGTPVEVLEPYLDE-VDLVLVMSVNP--GFGGQKFIPEVLE 151 (211)
T ss_pred CC---------------CCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH-HCEEEEEEECC--CCCCCCCCHHHHH
T ss_conf 22---------------089999999997398723575489998999999975-15227987468--8788754567999
Q ss_pred HHHHHHHHHH--HCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999876654--1562352078989877999997369963884259999999994099999999
Q gi|254780438|r 181 KLAITAQLAQ--KMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCF 242 (261)
Q Consensus 181 ~i~~aa~~A~--~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~ 242 (261)
T Consensus 152 ki~~l~~~~~~~~~~~~I~vDGGI~~~~i~~l~-~-~Gad~~V~GS~iF~~~---d~~~~i~~l 210 (211)
T cd00429 152 KIRKLRELIPENNLNLLIEVDGGINLETIPLLA-E-AGADVLVAGSALFGSD---DYAEAIKEL 210 (211)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-H-CCCCEEEECHHHHCCC---CHHHHHHHH
T ss_conf 999999999864998599996785989999999-8-5999999793775899---999999971