HHsearch alignment for GI: 254780438 and conserved domain: pfam03740

>pfam03740 PdxJ Pyridoxal phosphate biosynthesis protein PdxJ. Members of this family belong to the PdxJ family that catalyses the condensation of 1-deoxy-d-xylulose-5-phosphate (DXP) and 1-amino-3-oxo-4-(phosphohydroxy)propan-2-one to form pyridoxine 5'-phosphate (PNP). This reaction is involved in de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate.
Probab=100.00  E-value=0  Score=715.67  Aligned_cols=238  Identities=39%  Similarity=0.643  Sum_probs=228.2

Q ss_pred             CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH
Q ss_conf             45332214432232207886899899999999749989998247883348889999988740001367415888348568
Q gi|254780438|r    3 TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET   82 (261)
Q Consensus         3 t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e   82 (261)
T Consensus         1 mrL~VNidhiAtLRnaRg~~~Pd~~~aa~~~~~~GadgITvHlReDrRHI~d~Dv~~l~~~~-----~~~lNlE~~~~~e   75 (239)
T pfam03740         1 MRLGVNIDHIATLRNARGTPYPDPVEAALIAERAGADGITVHLREDRRHIQDRDVEVLKELI-----RTRFNIEMAPTEE   75 (239)
T ss_pred             CEEEEEECCEEEHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHC-----CCCEEECCCCHHH
T ss_conf             93226301021012058999989999999999839986895258876545237899999972-----8746775687499


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
Q ss_conf             99999850721289710165553335782213337889999986202696389972544441479999740661465112
Q gi|254780438|r   83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYT  162 (261)
Q Consensus        83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT  162 (261)
T Consensus        76 mi~ia~~~kP~qvtLVPE~r~elTTegGld~~~~~~~L~~~i~~lk~~girvSlFIDpd~~~--i~~a~~~Gad~VElhT  153 (239)
T pfam03740        76 MLELALKTKPHQVTLVPEKREEITTEGGLDVVAQLEKLKPAIRRLKNAGIRVSLFIDPDPEQ--IEAAKIVGADRIELHT  153 (239)
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHH--HHHHHHCCCCEEEEEC
T ss_conf             99999984998589888999873568880633406899999999860785389970799899--9999980929998504


Q ss_pred             CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             1110244435643-366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r  163 GPYGACYNNPQQE-RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC  241 (261)
Q Consensus       163 G~Ya~a~~~~~~~-~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~  241 (261)
T Consensus       154 G~YA~a~~~~~~~~~~~l~~i~~aa~~A~~lGL~VnAGHgLn~~Nl~~l-~~i~~i~EvnIGHaiI~~al~~Gl~~aV~~  232 (239)
T pfam03740       154 GPYADAHNDAEQAREELLERLAAGAALAFDLGLVVNAGHGLTYHNVKPV-AKIPPIAELNIGHSLVAEALFVGLAKAVLE  232 (239)
T ss_pred             HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH-HCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             7788775131555799999999999999874985746789887669998-528997488556999999999749999999


Q ss_pred             HHHHHHH
Q ss_conf             9999974
Q gi|254780438|r  242 FRRACGQ  248 (261)
Q Consensus       242 ~~~ii~~  248 (261)
T Consensus       233 ~~~ii~r  239 (239)
T pfam03740       233 MKALMKR  239 (239)
T ss_pred             HHHHHCC
T ss_conf             9998668