Query gi|254780438|ref|YP_003064851.1| pyridoxine 5'-phosphate synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 261
No_of_seqs 139 out of 1399
Neff 4.9
Searched_HMMs 33803
Date Wed Jun 1 12:54:41 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780438.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >3gk0_A PNP synthase, pyridoxi 100.0 0 0 714.5 25.6 247 2-257 31-277 (278)
2 >1m5w_A Pyridoxal phosphate bi 100.0 0 0 701.6 26.0 241 1-250 1-242 (243)
3 >3c6c_A 3-keto-5-aminohexanoat 96.7 0.025 7.3E-07 37.1 9.8 141 25-168 49-221 (316)
4 >3inp_A D-ribulose-phosphate 3 96.6 0.074 2.2E-06 33.8 15.0 203 21-248 37-245 (246)
5 >3e49_A Uncharacterized protei 96.6 0.077 2.3E-06 33.7 13.3 135 26-168 34-207 (311)
6 >3lot_A Uncharacterized protei 96.3 0.028 8.4E-07 36.7 8.1 174 26-203 34-264 (314)
7 >1i60_A IOLI protein; beta bar 95.8 0.15 4.4E-06 31.8 10.0 219 25-250 15-276 (278)
8 >1ps9_A 2,4-dienoyl-COA reduct 95.5 0.26 7.6E-06 30.1 10.7 128 102-231 176-318 (333)
9 >1gte_A Dihydropyrimidine dehy 95.2 0.31 9.2E-06 29.6 11.0 153 71-227 114-279 (280)
10 >3dx5_A Uncharacterized protei 95.1 0.28 8.2E-06 29.9 9.2 145 20-168 11-179 (286)
11 >3cqj_A L-ribulose-5-phosphate 95.0 0.31 9.1E-06 29.6 9.3 220 23-250 29-290 (295)
12 >3e02_A Uncharacterized protei 95.0 0.36 1.1E-05 29.1 15.3 170 26-203 34-261 (311)
13 >3chv_A Prokaryotic domain of 94.9 0.19 5.6E-06 31.0 8.0 135 26-167 36-182 (284)
14 >1o94_A Tmadh, trimethylamine 94.8 0.39 1.2E-05 28.9 12.6 130 101-231 183-329 (343)
15 >1xi3_A Thiamine phosphate pyr 94.5 0.46 1.4E-05 28.4 13.9 194 19-250 21-214 (215)
16 >1xp3_A Endonuclease IV; NFO, 94.5 0.2 5.9E-06 30.9 7.3 43 24-66 23-69 (307)
17 >1qtw_A Endonuclease IV; DNA r 94.3 0.27 8.1E-06 29.9 7.6 113 24-138 12-148 (285)
18 >3ctl_A D-allulose-6-phosphate 94.2 0.54 1.6E-05 27.9 14.1 214 22-257 10-228 (231)
19 >2fli_A Ribulose-phosphate 3-e 94.0 0.59 1.8E-05 27.6 15.8 206 21-247 13-219 (220)
20 >1q6o_A Humps, 3-keto-L-gulona 93.1 0.81 2.4E-05 26.7 12.2 204 21-250 10-215 (216)
21 >3inp_A D-ribulose-phosphate 3 93.0 0.62 1.8E-05 27.5 7.5 131 25-166 97-228 (246)
22 >3hgj_A Chromate reductase; TI 92.9 0.87 2.6E-05 26.5 12.4 127 101-231 186-326 (349)
23 >2zbt_A Pyridoxal biosynthesis 92.9 0.12 3.6E-06 32.4 3.8 43 23-65 27-78 (297)
24 >2q02_A Putative cytoplasmic p 92.8 0.52 1.5E-05 28.0 7.0 138 23-168 18-177 (272)
25 >1h1y_A D-ribulose-5-phosphate 92.4 1 3E-05 26.0 17.0 206 21-252 16-227 (228)
26 >2qul_A D-tagatose 3-epimerase 91.9 1.1 3.4E-05 25.6 9.3 203 2-216 1-239 (290)
27 >1i60_A IOLI protein; beta bar 91.7 0.56 1.7E-05 27.8 6.0 142 79-228 15-181 (278)
28 >1xla_A D-xylose isomerase; is 91.3 1.3 3.9E-05 25.2 12.2 236 1-246 6-329 (394)
29 >3kws_A Putative sugar isomera 90.0 1.7 5.1E-05 24.4 7.4 184 25-224 39-263 (287)
30 >2qw5_A Xylose isomerase-like 89.7 1.8 5.4E-05 24.3 10.1 186 1-230 7-225 (335)
31 >2gou_A Oxidoreductase, FMN-bi 89.6 0.91 2.7E-05 26.3 5.5 125 101-232 153-289 (323)
32 >3iix_A Biotin synthetase, put 89.4 1 3.1E-05 25.9 5.8 132 26-163 89-230 (348)
33 >1a0c_A Xylose isomerase; keto 88.6 2.1 6.3E-05 23.8 8.9 215 25-246 81-377 (438)
34 >2hsa_B 12-oxophytodienoate re 88.5 2.2 6.4E-05 23.7 14.3 163 26-232 173-357 (402)
35 >3cny_A Inositol catabolism pr 88.4 1.1 3.1E-05 25.9 5.2 233 3-248 10-300 (301)
36 >2yzr_A Pyridoxal biosynthesis 88.2 2 6E-05 23.9 6.5 60 25-89 25-94 (330)
37 >1twd_A Copper homeostasis pro 88.1 0.93 2.7E-05 26.3 4.7 197 27-250 11-246 (256)
38 >3ks6_A Glycerophosphoryl dies 88.1 0.39 1.1E-05 28.9 2.8 57 18-79 11-75 (217)
39 >3igs_A N-acetylmannosamine-6- 88.0 1.3 3.8E-05 25.3 5.5 182 19-226 31-213 (213)
40 >3cu2_A Ribulose-5-phosphate 3 87.8 2.4 7.1E-05 23.4 12.9 203 22-246 24-236 (237)
41 >2hk0_A D-psicose 3-epimerase; 86.9 2.7 7.9E-05 23.1 6.9 195 19-222 31-263 (309)
42 >2g0w_A LMO2234 protein; 16411 86.7 2.8 8.2E-05 23.0 10.6 212 25-253 37-293 (296)
43 >3ktc_A Xylose isomerase; puta 86.6 2.2 6.4E-05 23.7 5.9 153 3-165 8-206 (275)
44 >3ju2_A Uncharacterized protei 86.4 2.1 6.3E-05 23.8 5.8 228 3-249 6-279 (284)
45 >2h8z_A Xenobiotic reductase A 86.3 2.9 8.6E-05 22.9 8.7 216 13-232 22-289 (315)
46 >1rpx_A Protein (ribulose-phos 85.9 3 8.9E-05 22.7 12.6 207 20-248 19-229 (230)
47 >3kru_A NADH:flavin oxidoreduc 85.4 3.2 9.4E-05 22.6 11.0 127 101-232 177-316 (343)
48 >1mxs_A KDPG aldolase; 2-keto- 85.4 0.63 1.9E-05 27.4 2.7 167 19-230 33-201 (225)
49 >1icp_A OPR1, 12-oxophytodieno 85.0 3.3 9.8E-05 22.4 11.7 125 102-232 202-339 (376)
50 >2zds_A Putative DNA-binding p 84.8 3.4 1E-04 22.4 8.6 220 23-252 14-324 (340)
51 >1pii_A N-(5'phosphoribosyl)an 84.0 3.6 0.00011 22.2 10.0 166 27-228 25-192 (212)
52 >1j93_A UROD, uroporphyrinogen 83.7 3.7 0.00011 22.1 7.1 124 87-215 202-349 (353)
53 >3gka_A N-ethylmaleimide reduc 83.6 3.8 0.00011 22.1 7.8 36 194-230 288-323 (361)
54 >3g1v_A Orotidine 5'-phosphate 83.6 1.7 5.1E-05 24.4 4.3 24 26-49 80-103 (228)
55 >3f4w_A Putative hexulose 6 ph 83.5 3.8 0.00011 22.0 10.0 198 21-250 7-211 (211)
56 >2qs8_A XAA-Pro dipeptidase; a 83.4 3.9 0.00011 22.0 7.6 75 83-160 23-97 (119)
57 >2ekc_A AQ_1548, tryptophan sy 83.3 3.9 0.00012 22.0 9.0 205 22-246 26-260 (262)
58 >1tqx_A D-ribulose-5-phosphate 83.2 3.9 0.00012 21.9 16.8 208 20-251 14-226 (227)
59 >1wa3_A 2-keto-3-deoxy-6-phosp 83.0 4 0.00012 21.9 9.9 189 18-250 16-204 (205)
60 >2vp8_A Dihydropteroate syntha 82.4 4.2 0.00012 21.7 8.0 122 21-142 62-220 (318)
61 >3ial_A Prolyl-tRNA synthetase 82.2 3.3 9.9E-05 22.4 5.3 72 89-161 12-84 (155)
62 >2htm_A Thiazole biosynthesis 82.0 1.7 4.9E-05 24.5 3.7 187 22-230 21-214 (268)
63 >1k77_A EC1530, hypothetical p 81.7 3.6 0.00011 22.2 5.3 128 23-161 14-176 (246)
64 >2zvr_A Uncharacterized protei 80.9 4.7 0.00014 21.4 10.9 209 25-248 42-288 (290)
65 >2tps_A Protein (thiamin phosp 80.7 4.8 0.00014 21.3 10.4 198 20-251 27-225 (227)
66 >3gnh_A L-lysine, L-arginine c 79.9 5.1 0.00015 21.2 7.8 74 83-160 21-95 (118)
67 >1u83_A Phosphosulfolactate sy 79.8 2.1 6.3E-05 23.8 3.6 59 109-167 71-136 (276)
68 >1tqj_A Ribulose-phosphate 3-e 79.7 5.1 0.00015 21.1 13.4 209 20-252 13-227 (230)
69 >1ujp_A Tryptophan synthase al 78.0 5.8 0.00017 20.8 14.7 203 21-250 24-257 (271)
70 >2o1e_A YCDH; alpha-beta prote 76.6 5.1 0.00015 21.2 4.8 70 83-162 11-81 (82)
71 >2agk_A 1-(5-phosphoribosyl)-5 76.4 1.4 4.1E-05 25.1 1.8 199 21-247 35-257 (260)
72 >1ltq_A Polynucleotide kinase; 76.2 6.5 0.00019 20.4 5.3 59 105-165 90-148 (148)
73 >1ydn_A Hydroxymethylglutaryl- 75.7 6.7 0.0002 20.4 10.4 186 24-221 26-231 (295)
74 >3lab_A Putative KDPG (2-keto- 75.5 6.7 0.0002 20.3 12.8 190 18-244 19-213 (217)
75 >3i65_A Dihydroorotate dehydro 74.9 5 0.00015 21.2 4.4 127 118-247 200-345 (360)
76 >1yad_A Regulatory protein TEN 74.6 7.1 0.00021 20.2 10.3 194 19-251 24-217 (221)
77 >3feq_A Putative amidohydrolas 73.6 7.5 0.00022 20.0 7.1 75 82-160 43-118 (140)
78 >2bdq_A Copper homeostasis pro 73.1 7.7 0.00023 19.9 13.6 180 30-228 14-212 (224)
79 >2j3l_A Prolyl-tRNA synthetase 72.7 7.9 0.00023 19.9 6.1 64 88-160 41-104 (147)
80 >3jr2_A Hexulose-6-phosphate s 71.7 8.2 0.00024 19.7 13.2 200 21-247 13-215 (218)
81 >1vd6_A Glycerophosphoryl dies 70.6 8.7 0.00026 19.6 10.3 138 16-159 14-212 (224)
82 >1wv2_A Thiazole moeity, thiaz 70.0 6.4 0.00019 20.5 4.0 190 22-229 28-222 (265)
83 >1z41_A YQJM, probable NADH-de 69.6 9.1 0.00027 19.4 7.1 126 102-232 179-316 (338)
84 >3lmz_A Putative sugar isomera 69.1 9.3 0.00028 19.4 12.9 207 18-248 24-256 (257)
85 >1yrr_A N-acetylglucosamine-6- 68.7 9.5 0.00028 19.3 5.1 112 26-158 23-157 (222)
86 >1vc4_A Indole-3-glycerol phos 68.4 9.6 0.00029 19.3 17.6 190 22-242 63-252 (254)
87 >1muw_A Xylose isomerase; atom 68.2 9.8 0.00029 19.2 12.5 135 3-141 8-182 (386)
88 >1nsj_A PRAI, phosphoribosyl a 68.1 9.8 0.00029 19.2 7.6 187 27-248 12-201 (205)
89 >1bxb_A Xylose isomerase; xylo 67.7 9.9 0.00029 19.2 12.9 217 20-247 29-310 (387)
90 >2yyu_A Orotidine 5'-phosphate 67.0 10 0.0003 19.1 7.4 52 196-254 190-243 (246)
91 >3bdk_A D-mannonate dehydratas 66.6 10 0.00031 19.0 9.7 83 82-166 159-262 (386)
92 >2p9b_A Possible prolidase; pr 65.9 11 0.00032 18.9 7.0 76 83-161 26-103 (175)
93 >3be7_A Zn-dependent arginine 65.9 11 0.00032 18.9 7.7 75 83-160 35-109 (132)
94 >1w0m_A TIM, triosephosphate i 65.6 11 0.00032 18.9 12.7 147 30-189 78-225 (226)
95 >1wx0_A Transaldolase; structu 65.6 11 0.00032 18.9 10.9 176 22-226 6-197 (199)
96 >1olt_A Oxygen-independent cop 65.1 7.2 0.00021 20.1 3.4 91 71-162 140-241 (364)
97 >1a53_A IGPS, indole-3-glycero 64.4 11 0.00034 18.7 19.2 179 19-228 33-213 (223)
98 >3exr_A RMPD (hexulose-6-phosp 64.3 12 0.00034 18.7 10.8 203 21-250 12-220 (221)
99 >1ati_A Glycyl-tRNA synthetase 64.3 12 0.00034 18.7 6.2 62 88-158 19-80 (130)
100 >1tz9_A Mannonate dehydratase; 64.2 5.4 0.00016 21.0 2.7 81 24-106 22-123 (367)
101 >1evl_A Threonyl-tRNA syntheta 63.8 12 0.00035 18.7 6.3 59 90-160 2-60 (107)
102 >1qf6_A THRRS, threonyl-tRNA s 63.8 12 0.00035 18.7 6.2 59 90-160 2-60 (107)
103 >1vyr_A Pentaerythritol tetran 62.6 12 0.00036 18.5 8.8 122 101-232 153-290 (322)
104 >1zco_A 2-dehydro-3-deoxyphosp 62.3 7.1 0.00021 20.2 3.0 118 26-163 39-169 (262)
105 >1npb_A Fosfomycin-resistance 60.9 11 0.00032 18.9 3.7 36 116-163 14-58 (58)
106 >3gza_A Putative alpha-L-fucos 60.6 12 0.00036 18.5 4.0 29 21-49 56-84 (345)
107 >3c4u_A Fructose-bisphosphate 60.3 14 0.0004 18.2 10.8 187 27-227 31-259 (307)
108 >1vzw_A Phosphoribosyl isomera 60.0 8.7 0.00026 19.6 3.1 184 23-231 31-230 (244)
109 >3l55_A B-1,4-endoglucanase/ce 59.4 14 0.00041 18.2 4.3 21 42-62 43-63 (353)
110 >1d3g_A Dihydroorotate dehydro 58.7 14 0.00042 18.1 4.2 140 106-247 194-353 (367)
111 >3hvb_A Protein FIMX; EAL phos 57.8 15 0.00044 18.0 8.0 109 90-215 303-412 (437)
112 >3iv8_A N-acetylglucosamine-6- 57.7 9.4 0.00028 19.3 3.0 102 82-209 95-199 (219)
113 >2ze3_A DFA0005; organic waste 57.2 15 0.00045 17.9 5.8 70 27-97 26-111 (233)
114 >1nj1_A Proline-tRNA synthetas 57.2 15 0.00045 17.9 5.8 66 89-161 12-77 (131)
115 >2r14_A Morphinone reductase; 56.7 15 0.00046 17.8 8.5 122 101-231 156-292 (333)
116 >1o0y_A Deoxyribose-phosphate 56.5 16 0.00046 17.8 4.7 129 84-227 117-249 (260)
117 >3lc0_A Histidyl-tRNA syntheta 56.0 16 0.00047 17.8 5.7 60 90-161 3-62 (100)
118 >3dhu_A Alpha-amylase; structu 55.1 15 0.00045 17.9 3.7 60 83-142 35-108 (351)
119 >3hm7_A Allantoinase; metallo- 55.1 16 0.00048 17.7 9.8 202 22-234 15-222 (270)
120 >2v82_A 2-dehydro-3-deoxy-6-ph 54.8 17 0.00049 17.6 12.8 191 18-250 13-208 (212)
121 >1oya_A OLD yellow enzyme; oxi 54.2 17 0.0005 17.6 9.1 86 78-164 49-152 (308)
122 >2i4l_A Proline-tRNA ligase; a 53.9 17 0.00051 17.5 6.2 64 89-161 44-107 (140)
123 >1i4n_A Indole-3-glycerol phos 53.8 17 0.00051 17.5 15.3 188 26-246 41-229 (230)
124 >1ub3_A Aldolase protein; schi 53.5 17 0.00051 17.5 4.4 185 18-226 10-208 (220)
125 >3ivs_A Homocitrate synthase, 53.1 18 0.00052 17.5 14.9 168 25-207 62-241 (311)
126 >2eui_A Probable acetyltransfe 51.8 8 0.00024 19.8 1.8 107 50-163 4-120 (120)
127 >1y7l_A O-acetylserine sulfhyd 51.8 18 0.00054 17.3 5.1 48 122-169 38-86 (105)
128 >3gfz_A Klebsiella pneumoniae 51.2 19 0.00056 17.3 5.7 94 115-215 139-233 (264)
129 >1ad1_A DHPS, dihydropteroate 51.1 19 0.00056 17.3 10.4 117 22-142 24-169 (266)
130 >1rvg_A Fructose-1,6-bisphosph 50.7 19 0.00056 17.2 11.2 183 30-226 34-256 (305)
131 >1mio_B Nitrogenase molybdenum 50.6 19 0.00057 17.2 3.7 40 130-169 2-41 (109)
132 >2p0o_A Hypothetical protein D 50.6 15 0.00045 17.9 3.1 23 118-140 158-180 (225)
133 >1x7f_A Outer surface protein; 49.7 20 0.00059 17.1 3.7 40 26-65 43-84 (267)
134 >1w8s_A FBP aldolase, fructose 48.6 21 0.00061 17.0 6.1 203 6-248 20-253 (263)
135 >3ih1_A Methylisocitrate lyase 48.6 8.7 0.00026 19.6 1.6 200 11-229 17-249 (270)
136 >2isw_A Putative fructose-1,6- 48.5 21 0.00061 17.0 7.3 186 28-227 33-259 (323)
137 >1nyr_A Threonyl-tRNA syntheta 48.5 21 0.00061 17.0 5.6 61 90-161 2-62 (104)
138 >2hl0_A Threonyl-tRNA syntheta 48.3 21 0.00061 17.0 4.4 49 147-197 65-113 (143)
139 >2zt5_A Glycyl-tRNA synthetase 48.1 21 0.00062 16.9 5.8 64 88-161 17-80 (155)
140 >1oy0_A Ketopantoate hydroxyme 47.7 21 0.00063 16.9 3.8 171 11-215 22-214 (234)
141 >2ztj_A Homocitrate synthase; 47.1 22 0.00064 16.8 15.4 179 24-212 25-212 (277)
142 >3fem_A Pyridoxine biosynthesi 47.1 22 0.00064 16.8 5.0 54 11-64 9-73 (297)
143 >3i10_A Putative glycerophosph 46.4 22 0.00066 16.8 12.3 77 16-98 24-109 (239)
144 >3i3g_A N-acetyltransferase; m 46.3 22 0.00066 16.8 4.0 102 50-162 24-137 (138)
145 >1fa2_A Beta-amylase; TIM barr 46.1 17 0.0005 17.6 2.8 63 182-244 365-445 (498)
146 >1aj0_A DHPS, dihydropteroate 46.1 22 0.00066 16.7 11.2 124 18-142 29-188 (282)
147 >1gcy_A Glucan 1,4-alpha-malto 46.1 19 0.00057 17.2 3.0 58 84-141 43-116 (337)
148 >1to3_A Putative aldolase YIHT 46.0 22 0.00066 16.7 7.9 186 24-234 48-265 (304)
149 >2wc7_A Alpha amylase, catalyt 44.9 23 0.00069 16.6 3.4 64 15-80 47-126 (400)
150 >1p1x_A Deoxyribose-phosphate 44.5 24 0.0007 16.6 5.0 153 86-249 93-252 (260)
151 >1wky_A Endo-beta-1,4-mannanas 44.4 24 0.0007 16.6 3.5 51 27-79 42-94 (268)
152 >1qe0_A Histidyl-tRNA syntheta 44.4 24 0.0007 16.6 5.4 59 90-160 2-60 (95)
153 >1eix_A Orotidine 5'-monophosp 44.1 12 0.00036 18.6 1.7 47 197-248 197-243 (245)
154 >3l12_A Putative glycerophosph 43.9 24 0.00071 16.5 7.5 37 120-158 200-236 (256)
155 >1ka9_F Imidazole glycerol pho 43.9 24 0.00071 16.5 6.2 205 14-248 21-244 (252)
156 >2dh2_A 4F2 cell-surface antig 43.2 24 0.00072 16.5 3.2 56 83-141 41-105 (329)
157 >1h4p_A Glucan 1,3-beta-glucos 42.7 25 0.00074 16.4 3.4 23 117-139 113-135 (408)
158 >3bc9_A AMYB, alpha amylase, c 41.5 26 0.00077 16.3 3.6 51 116-166 91-148 (298)
159 >1qwg_A PSL synthase;, (2R)-ph 41.2 26 0.00078 16.2 4.0 135 78-235 85-243 (251)
160 >3ldv_A Orotidine 5'-phosphate 41.1 18 0.00052 17.4 2.2 107 42-164 3-115 (255)
161 >2zxd_A Alpha-L-fucosidase, pu 40.0 25 0.00074 16.4 2.8 88 80-167 107-230 (354)
162 >3cx3_A Lipoprotein; zinc-bind 39.5 28 0.00083 16.1 4.0 67 85-161 13-80 (85)
163 >1ua7_A Alpha-amylase; beta-al 39.4 25 0.00073 16.4 2.7 28 115-142 72-99 (344)
164 >1v71_A Serine racemase, hypot 39.1 28 0.00084 16.0 4.4 48 125-173 23-70 (83)
165 >2h6r_A Triosephosphate isomer 39.0 29 0.00084 16.0 5.8 184 22-227 9-203 (219)
166 >1req_A Methylmalonyl-COA muta 38.3 29 0.00086 15.9 5.9 101 41-158 36-139 (163)
167 >1vqt_A Orotidine 5'-phosphate 37.7 14 0.00042 18.1 1.3 80 89-168 11-99 (213)
168 >1dbt_A Orotidine 5'-phosphate 37.4 30 0.00089 15.8 3.1 154 80-250 15-238 (239)
169 >1v5x_A PRA isomerase, phospho 37.1 31 0.0009 15.8 8.2 186 26-250 10-200 (203)
170 >3iar_A Adenosine deaminase; p 36.7 31 0.00091 15.8 3.4 114 108-226 58-177 (179)
171 >1req_B Methylmalonyl-COA muta 36.5 31 0.00092 15.7 7.5 108 42-166 40-148 (163)
172 >1xrs_B D-lysine 5,6-aminomuta 36.5 31 0.00092 15.7 6.8 70 78-158 73-144 (168)
173 >2dch_X Putative homing endonu 36.2 24 0.0007 16.6 2.2 27 114-140 14-41 (72)
174 >2qjg_A Putative aldolase MJ04 36.0 32 0.00094 15.7 5.5 187 8-228 31-242 (273)
175 >1hx0_A Alpha amylase (PPA); i 35.8 27 0.00079 16.2 2.4 55 86-140 31-99 (386)
176 >2r6o_A Putative diguanylate c 35.5 32 0.00095 15.6 7.5 120 80-215 128-254 (294)
177 >1l6w_A Fructose-6-phosphate a 35.5 32 0.00096 15.6 8.7 179 23-228 7-192 (196)
178 >1v7c_A Threonine synthase; PL 34.9 13 0.00038 18.4 0.7 47 123-170 35-82 (109)
179 >3a1c_A Probable copper-export 34.8 33 0.00098 15.6 3.1 46 116-162 42-87 (165)
180 >3l23_A Sugar phosphate isomer 34.5 33 0.00099 15.5 9.4 41 23-64 28-68 (303)
181 >3k2y_A Uncharacterized protei 34.4 34 0.00099 15.5 4.1 69 71-139 9-86 (109)
182 >2z1k_A (NEO)pullulanase; hydr 34.3 34 0.001 15.5 3.1 59 20-80 46-120 (394)
183 >1nj8_A Proline-tRNA synthetas 33.7 34 0.001 15.4 3.1 96 55-158 12-107 (164)
184 >1xky_A Dihydrodipicolinate sy 33.5 35 0.001 15.4 6.4 139 71-222 22-173 (219)
185 >2wqp_A Polysialic acid capsul 33.3 35 0.001 15.4 4.6 19 147-165 117-135 (276)
186 >1bqc_A Protein (beta-mannanas 33.2 35 0.001 15.4 3.9 105 26-132 34-156 (302)
187 >1j0h_A Neopullulanase; beta-a 33.2 35 0.001 15.4 2.8 54 86-141 57-119 (375)
188 >2pc8_A Hypothetical protein X 33.1 35 0.001 15.4 3.8 16 48-63 71-86 (400)
189 >1d8w_A L-rhamnose isomerase; 33.1 35 0.001 15.4 8.2 220 23-252 76-366 (426)
190 >2prs_A High-affinity zinc upt 32.9 35 0.001 15.4 6.2 44 117-161 37-81 (112)
191 >2csu_A 457AA long hypothetica 32.7 36 0.0011 15.3 3.8 89 94-196 36-124 (126)
192 >1gkp_A Hydantoinase; hydrolas 32.5 36 0.0011 15.3 6.2 192 23-233 18-222 (289)
193 >1vli_A Spore coat polysacchar 32.2 36 0.0011 15.3 3.6 128 82-212 48-214 (300)
194 >1z4e_A Transcriptional regula 32.0 37 0.0011 15.3 4.7 109 49-163 7-127 (128)
195 >1vs1_A 3-deoxy-7-phosphoheptu 32.0 37 0.0011 15.3 2.7 39 26-64 54-98 (276)
196 >2pqm_A Cysteine synthase; OAS 31.8 37 0.0011 15.2 4.7 43 123-165 39-81 (109)
197 >1q7z_A 5-methyltetrahydrofola 31.8 37 0.0011 15.2 7.4 126 7-143 28-183 (272)
198 >1xm3_A Thiazole biosynthesis 31.6 37 0.0011 15.2 5.7 188 22-229 21-213 (264)
199 >2v03_A Cysteine synthase B; p 31.6 37 0.0011 15.2 5.0 49 122-170 38-87 (109)
200 >3ezx_A MMCP 1, monomethylamin 31.3 38 0.0011 15.2 6.1 97 46-158 15-115 (130)
201 >2ftp_A Hydroxymethylglutaryl- 30.9 38 0.0011 15.1 11.4 184 13-207 14-221 (302)
202 >3e74_A Allantoinase; (beta/al 30.8 38 0.0011 15.1 13.1 202 22-236 15-228 (287)
203 >2eja_A URO-D, UPD, uroporphyr 30.6 39 0.0011 15.1 9.0 128 83-214 184-332 (338)
204 >2cc0_A Acetyl-xylan esterase; 30.6 39 0.0011 15.1 3.4 64 99-167 3-66 (195)
205 >1o1z_A GDPD, glycerophosphodi 30.4 39 0.0011 15.1 10.0 35 18-52 21-57 (234)
206 >1toa_A Tromp-1, protein (peri 30.3 39 0.0012 15.1 3.2 46 116-162 36-82 (118)
207 >3kzx_A HAD-superfamily hydrol 29.9 39 0.0012 15.0 3.8 60 106-167 70-129 (136)
208 >2q0y_A GCN5-related N-acetylt 29.9 5.4 0.00016 21.0 -1.9 111 50-162 5-128 (129)
209 >2inf_A URO-D, UPD, uroporphyr 29.8 40 0.0012 15.0 10.3 112 86-202 201-330 (330)
210 >1ep3_A Dihydroorotate dehydro 29.7 40 0.0012 15.0 7.8 157 71-229 101-276 (311)
211 >3l6b_A Serine racemase; pyrid 29.5 40 0.0012 15.0 4.3 49 123-172 19-67 (82)
212 >2cw6_A Hydroxymethylglutaryl- 29.4 40 0.0012 15.0 8.2 195 14-222 12-233 (298)
213 >1vhc_A Putative KHG/KDPG aldo 29.0 41 0.0012 14.9 9.9 189 18-250 23-217 (224)
214 >1m1n_B Nitrogenase molybdenum 28.9 41 0.0012 14.9 4.9 104 89-203 23-140 (215)
215 >1y0e_A Putative N-acetylmanno 28.7 41 0.0012 14.9 8.9 177 20-226 19-207 (207)
216 >1kwg_A Beta-galactosidase; TI 28.6 42 0.0012 14.9 3.6 24 117-140 50-73 (394)
217 >2hmc_A AGR_L_411P, dihydrodip 28.0 43 0.0013 14.8 5.9 140 71-223 36-187 (235)
218 >3d3a_A Beta-galactosidase; pr 27.6 43 0.0013 14.8 2.7 26 38-63 24-49 (279)
219 >1qgu_B Protein (nitrogenase m 27.4 43 0.0013 14.7 4.8 134 114-247 62-216 (240)
220 >1y80_A Predicted cobalamin bi 27.2 44 0.0013 14.7 6.3 43 122-165 107-150 (210)
221 >1swv_A Phosphonoacetaldehyde 27.2 44 0.0013 14.7 4.6 100 114-215 76-176 (183)
222 >1p5j_A L-serine dehydratase; 27.0 44 0.0013 14.7 4.7 44 127-171 20-63 (80)
223 >3dwg_A Cysteine synthase B; s 26.5 45 0.0013 14.6 4.7 44 126-169 21-65 (81)
224 >1tg7_A Beta-galactosidase; TI 26.3 36 0.0011 15.3 1.8 13 31-43 43-55 (356)
225 >2whl_A Beta-mannanase, baman5 25.9 46 0.0014 14.6 3.6 108 28-139 35-157 (258)
226 >1s9r_A Arginine deiminase; hy 25.9 46 0.0014 14.6 2.3 43 97-139 34-76 (93)
227 >3ceu_A Thiamine phosphate pyr 25.6 47 0.0014 14.5 7.6 186 18-247 7-193 (210)
228 >1zcc_A Glycerophosphodiester 25.6 47 0.0014 14.5 5.8 138 21-159 12-221 (248)
229 >3g8r_A Probable spore coat po 25.4 47 0.0014 14.5 3.4 47 118-167 78-124 (264)
230 >2gn0_A Threonine dehydratase 25.3 47 0.0014 14.5 4.6 45 126-171 21-65 (81)
231 >3flu_A DHDPS, dihydrodipicoli 25.3 47 0.0014 14.5 6.3 122 21-164 86-214 (297)
232 >1geq_A Tryptophan synthase al 25.0 48 0.0014 14.5 10.8 129 115-250 117-246 (248)
233 >3civ_A Endo-beta-1,4-mannanas 24.8 48 0.0014 14.4 2.8 24 118-141 151-176 (343)
234 >2cks_A Endoglucanase E-5; car 24.7 49 0.0014 14.4 5.1 106 25-130 44-165 (306)
235 >1z7w_A Cysteine synthase; tra 24.7 49 0.0014 14.4 4.4 47 123-169 40-87 (106)
236 >1ydo_A HMG-COA lyase; TIM-bar 24.5 49 0.0015 14.4 11.6 197 13-222 12-234 (307)
237 >1gvf_A Tagatose-bisphosphate 24.4 49 0.0015 14.4 9.5 187 26-227 31-236 (286)
238 >1xim_A D-xylose isomerase; is 24.2 50 0.0015 14.4 12.4 167 23-199 32-248 (393)
239 >1m1n_A Nitrogenase molybdenum 23.9 50 0.0015 14.3 4.0 51 117-167 88-140 (248)
240 >2rk0_A Glyoxalase/bleomycin r 23.8 50 0.0015 14.3 2.8 42 116-170 15-67 (69)
241 >1o58_A O-acetylserine sulfhyd 23.8 50 0.0015 14.3 4.1 50 122-171 36-86 (102)
242 >1zy9_A Alpha-galactosidase; T 23.5 38 0.0011 15.1 1.5 60 82-143 21-83 (196)
243 >1h1n_A Endo type cellulase EN 23.3 52 0.0015 14.2 4.3 24 40-63 20-43 (305)
244 >1g5h_A Mitochondrial DNA poly 23.2 52 0.0015 14.2 5.4 66 86-160 68-136 (190)
245 >3llx_A Predicted amino acid a 23.0 52 0.0015 14.2 9.5 170 26-226 30-218 (218)
246 >2nwr_A 2-dehydro-3-deoxyphosp 23.0 52 0.0015 14.2 3.5 38 28-65 25-72 (267)
247 >1ny1_A Probable polysaccharid 23.0 52 0.0015 14.2 3.0 83 82-168 24-106 (240)
248 >2bas_A YKUI protein; EAL doma 22.8 53 0.0016 14.2 7.4 89 115-209 154-243 (263)
249 >2q3b_A Cysteine synthase A; p 22.7 53 0.0016 14.2 5.3 48 122-169 38-86 (105)
250 >1tv5_A Dhodehase, dihydroorot 22.7 53 0.0016 14.2 3.3 47 115-161 226-278 (390)
251 >1vrd_A Inosine-5'-monophospha 22.2 54 0.0016 14.1 3.0 138 19-163 231-371 (494)
252 >1htt_A Histidyl-tRNA syntheta 22.0 55 0.0016 14.1 5.1 56 91-158 2-59 (99)
253 >1l2l_A ADP-dependent glucokin 21.8 28 0.00082 16.1 0.5 85 70-170 133-224 (327)
254 >3ch0_A Glycerophosphodiester 21.7 55 0.0016 14.0 2.2 36 16-51 15-52 (272)
255 >2p22_D Hypothetical 12.0 kDa 21.6 29 0.00086 15.9 0.6 11 15-25 12-22 (79)
256 >1vr6_A Phospho-2-dehydro-3-de 21.2 57 0.0017 14.0 3.0 53 25-79 36-94 (265)
257 >1egz_A Endoglucanase Z, EGZ, 21.2 57 0.0017 14.0 4.6 138 24-165 39-196 (291)
258 >1f76_A Dihydroorotate dehydro 21.0 39 0.0012 15.1 1.1 131 96-229 173-325 (336)
259 >3hv8_A Protein FIMX; EAL phos 20.9 57 0.0017 13.9 6.6 88 114-208 149-237 (268)
260 >2i2x_B MTAC, methyltransferas 20.6 58 0.0017 13.9 6.2 71 74-158 38-109 (140)
261 >1gjw_A Maltodextrin glycosylt 20.6 58 0.0017 13.9 4.7 58 83-140 125-204 (433)
262 >1e5x_A Threonine synthase; th 20.4 59 0.0017 13.8 4.4 44 127-171 44-88 (108)
263 >1wkv_A Cysteine synthase; hom 20.2 59 0.0018 13.8 5.1 51 122-172 36-87 (102)
264 >3eww_A Ompdecase, orotidine-5 20.1 18 0.00052 17.4 -0.8 168 71-252 34-256 (260)
No 1
>>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei} (A:)
Probab=100.00 E-value=0 Score=714.48 Aligned_cols=247 Identities=30% Similarity=0.463 Sum_probs=238.8
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 84533221443223220788689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
|++||||||||||||||||+++|||+++|.+|+++||||||+|||||||||||+||+.|++++ ++||||||+|++
T Consensus 31 m~~LgVNIDhVAtLRnaR~~~~PD~v~aA~~a~~aGAdgITvHlReDrRHI~d~Dv~~L~~~i-----~~~lNlE~a~t~ 105 (278)
T 3gk0_A 31 AIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRV-----KTRMNLECAVTP 105 (278)
T ss_dssp GSEEEEECHHHHHHHHHHSSSCSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHC-----SSCEEEEECSSH
T ss_pred CEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHH
T ss_conf 158877512165310058989999999999999839986995258876667578888887403-----556686656638
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
||++||+++||+|||||||+|+|+|||||||+.++.++|+++|++|+++|||||||||||++| |++|+++|||+||||
T Consensus 106 emi~ia~~~kP~~vtLVPEkr~ElTTegGlDv~~~~~~L~~~i~~Lk~~gIrVSLFiDP~~~q--i~~A~~~GAd~VELh 183 (278)
T 3gk0_A 106 EMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQ--IRAAHETGAPVIELH 183 (278)
T ss_dssp HHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHHTCSEEEEC
T ss_pred HHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH--HHHHHHHCCCEEEEC
T ss_conf 899989851403899832576531223645412178789999999987287279996453144--778776166767650
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 21110244435643366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r 162 TGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC 241 (261)
Q Consensus 162 TG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~ 241 (261)
||+||++|..+.+. .||++|+.+|.+|+++||+|||||||||+|++. +++||+|.||||||||||||||+||++||++
T Consensus 184 TG~YA~a~~~~~~~-~el~rl~~aA~~A~~lGL~VnAGHgLny~Nv~~-ia~ip~i~EvnIGHaiia~Al~~Gl~~AVr~ 261 (278)
T 3gk0_A 184 TGRYADAHDAAEQQ-REFERIATGVDAGIALGLKVNAGHGLHYTNVQA-IAALPGIAELNIGHAIVAHAVFVGWDNAVRE 261 (278)
T ss_dssp CHHHHTCSSHHHHH-HHHHHHHHHHHHHHHTTCEEEECTTCCTTTHHH-HHTCTTEEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CHHHHHCCCCCHHH-HHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH-HHCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 05554102220127-999999987778987098896578988656899-8528997698566999999999729999999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999974105655403
Q gi|254780438|r 242 FRRACGQHLDNTMRLT 257 (261)
Q Consensus 242 ~~~ii~~~~~~~~~~~ 257 (261)
|++++++.+.+++|+-
T Consensus 262 m~~~l~~~r~~~~~~~ 277 (278)
T 3gk0_A 262 MKAIMVAARVAALHGG 277 (278)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCC
T ss_conf 9999999733023279
No 2
>>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} (A:)
Probab=100.00 E-value=0 Score=701.56 Aligned_cols=241 Identities=34% Similarity=0.526 Sum_probs=231.8
Q ss_pred CC-CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 98-45332214432232207886899899999999749989998247883348889999988740001367415888348
Q gi|254780438|r 1 MS-TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP 79 (261)
Q Consensus 1 M~-t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p 79 (261)
|+ ++||||||||||||||||+++|||+++|.+|+++||||||+|||||||||||+||+.|++++ ++||||||+|
T Consensus 1 m~~~~LgVNidhvAtLRnaR~~~~Pd~v~aA~~a~~aGAdgITvHlReDrRHI~d~Dv~~L~~~~-----~~~lNlE~a~ 75 (243)
T 1m5w_A 1 MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTL-----DTRMNLEMAV 75 (243)
T ss_dssp -CCCEEEEECHHHHHHHHTSSCCCSCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHC-----SSEEEEEECS
T ss_pred CCCCEEEEEECCEEEHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHH-----HHHHHCCCCC
T ss_conf 98525774300121012058999989999999999839985894468876544158999999865-----5665226777
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEE
Q ss_conf 56899999850721289710165553335782213337889999986202696389972544441479999740661465
Q gi|254780438|r 80 NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIE 159 (261)
Q Consensus 80 ~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VE 159 (261)
+++|+++|+++||+|||||||+|+|+|||||||+.++.++|++++++|+++|||||||||||++| |++|+++|||+||
T Consensus 76 t~emi~ia~~~kP~~vtLVPE~r~E~TTegGldv~~~~~~L~~~i~~l~~~gI~VSLFidP~~~q--i~~A~~~GAd~VE 153 (243)
T 1m5w_A 76 TEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQ--IKAAAEVGAPFIE 153 (243)
T ss_dssp SHHHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHTTCSEEE
T ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHHCCCCEEE
T ss_conf 48899899876998789767887755877745320338899999999986597079983688899--9999970999575
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf 11211102444356433666889998766541562352078989877999997369963884259999999994099999
Q gi|254780438|r 160 LYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAV 239 (261)
Q Consensus 160 lhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI 239 (261)
||||+||++|..+.+. .||++|+.++++|+++||+|||||||||+|++. +++||+|.||||||||||+|+|+||++||
T Consensus 154 LhTG~ya~a~~~~~~~-~el~~l~~aa~~a~~lGL~VnAGHgL~y~Nv~~-i~~ip~i~ElnIGHsiia~Al~~Gl~~AV 231 (243)
T 1m5w_A 154 IHTGCYADAKTDAEQA-QELARIAKAATFAASLGLKVNAGHGLTYHNVKA-IAAIPEMHELNIGHAIIGRAVMTGLKDAV 231 (243)
T ss_dssp EECHHHHHCCSHHHHH-HHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHH-HHTCTTEEEEEECHHHHHHHHHHCHHHHH
T ss_pred ECCHHHHCCCCCHHHH-HHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH-HHCCCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf 1000211323320257-899999999999986698443799988666899-84389976984579999999997399999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999997410
Q gi|254780438|r 240 FCFRRACGQHL 250 (261)
Q Consensus 240 ~~~~~ii~~~~ 250 (261)
++|+++|++.|
T Consensus 232 ~~m~~~i~~ar 242 (243)
T 1m5w_A 232 AEMKRLMLEAR 242 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHCC
T ss_conf 99999998715
No 3
>>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; YP_293392.1, prokaryotic protein of unknown function (DUF849), structural genomics; HET: MSE; 1.72A {Ralstonia eutropha JMP134} (A:)
Probab=96.69 E-value=0.025 Score=37.11 Aligned_cols=141 Identities=18% Similarity=0.150 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHH-HHHHHCCCCCCCEEEEEE----------------------CC
Q ss_conf 98999999997499899982478--833488899999-887400013674158883----------------------48
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPE-IRRLIDEQFPKAELNIEG----------------------YP 79 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg----------------------~p 79 (261)
.+++.|..|.++||.-+-+|+|. |-||-.|-|.+. +-.-+....+++-+|+-- -+
T Consensus 49 EIa~~A~~c~~AGAaivHlH~Rd~~dG~~s~d~~~y~eii~~IR~~~pd~ii~~TTg~~g~~~~~~~~~~~~~~~~~~~~ 128 (316)
T 3c6c_A 49 QIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALPESDVVP 128 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECTTCEECC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 99999999998187389987558888996789999999999999873880798468756566777011110247767788
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC------
Q ss_conf 56899999850721289710165553335782213337889999986202696389972544441479999740------
Q gi|254780438|r 80 NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLT------ 153 (261)
Q Consensus 80 ~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~------ 153 (261)
.++=+......+|+.++|=.-..+.......--+......+..+...+++.||++++=+. |+.. +..+..+
T Consensus 129 ~~~r~~~~~~~~Pd~asl~~g~~n~~~~~~~~v~~n~~~~~~~~~~~~~e~gi~pe~evf-d~g~--l~~~~~l~~~Gll 205 (316)
T 3c6c_A 129 VAERVKHLEDCLPEIASLDITTGNQVEGKLEFVYLNTTRTLRAXARRFQELGIKPELEVF-SPGD--ILFGKQLIEEGLI 205 (316)
T ss_dssp HHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEECCCHHHHHHHHHHHHHHTCEEEEEES-SHHH--HHHHHHHHHTTCS
T ss_pred HHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEE-CHHH--HHHHHHHHHCCCC
T ss_conf 999861512058660024666554223554403428878878999999973984699996-6499--9999999865887
Q ss_pred -CCCEEEECCCCCHHH
Q ss_conf -661465112111024
Q gi|254780438|r 154 -GADCIELYTGPYGAC 168 (261)
Q Consensus 154 -Gad~VElhTG~Ya~a 168 (261)
+.-.+.|.-|.|.-.
T Consensus 206 ~~p~~~~~vlG~~~g~ 221 (316)
T 3c6c_A 206 DGVPLFQXVLGVLWGA 221 (316)
T ss_dssp CSSCEEEEECSCTTSC
T ss_pred CCCCEEEEECCCCCCC
T ss_conf 8973688731446667
No 4
>>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp} (A:)
Probab=96.64 E-value=0.074 Score=33.82 Aligned_cols=203 Identities=11% Similarity=0.068 Sum_probs=130.3
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCC----CCCCCCHHHHHHHHHHHCCCCCCCEEE--EEECCCHHHHHHHHHHCCCE
Q ss_conf 868998999999997499899982478----833488899999887400013674158--88348568999998507212
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPRP----DQRHIRYTDLPEIRRLIDEQFPKAELN--IEGYPNETFLNLCERYKPEQ 94 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R~----DrRHI~~~Dv~~l~~~~~~~~~~~elN--iEg~p~~e~i~ia~~ikP~q 94 (261)
.++|++.++++.+.++|++.+-+.... .....-...+..++.... ...++ .-......+++.+.....+.
T Consensus 37 ~d~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~aga~~ 112 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI----TAGMDVHLMVKPVDALIESFAKAGATS 112 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC----CSCEEEEEECSSCHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC----CCEEEEEEEECCHHHHHHHHHHCCCCE
T ss_conf 4899999999999976999899944588420111568699999987388----603751466359799888987559857
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 89710165553335782213337889999986202696389972544441479999740661465112111024443564
Q gi|254780438|r 95 ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 95 vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
+++-.+...+ .....+..+..+....+.+...... ....+...++|.+.+.+--+.........
T Consensus 113 v~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 176 (246)
T 3inp_A 113 IVFHPEASEH---------------IDRSLQLIKSFGIQAGLALNPATGI-DCLKYVESNIDRVLIMSVNPGFGGQKFIP 176 (246)
T ss_dssp EEECGGGCSC---------------HHHHHHHHHTTTSEEEEEECTTCCS-GGGTTTGGGCSEEEEECSCTTC--CCCCT
T ss_pred EEECCCCCCC---------------HHHHHHHHHHCCCCEEEEEECCCCC-HHHHHHHHHHHEEEEEEECCCCCCCHHHH
T ss_conf 8842210117---------------8999999987498437898515551-01667776442247888426876310235
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33666889998766541562352078989877999997369963884259999999994099999999999974
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
..................++.|-+|-|.+.+|+..+++ -+.+=|-+|-+|... --.++++++|++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~i~i~~~GGi~~~~~~~~~~--~Gad~VvvGsaI~~a---~dp~~~~~~~~~~i~~ 245 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAV--CGVNAFVAGSAIFNS---DSYKQTIDKMRDELNK 245 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHT--TTCCEEEESHHHHTS---SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHC
T ss_conf 56778899987602568871799978678999999998--799999989688789---9999999999999864
No 5
>>3e49_A Uncharacterized protein DUF849 with A TIM barrel fold; YP_556190.1; HET: MSE; 1.75A {Burkholderia xenovorans LB400} (A:)
Probab=96.61 E-value=0.077 Score=33.70 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=92.1
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHH-----HHHHHHCCCCCCCEEEEE--ECC---CHHHHHHHHHHCCC
Q ss_conf 8999999997499899982478--83348889999-----988740001367415888--348---56899999850721
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLP-----EIRRLIDEQFPKAELNIE--GYP---NETFLNLCERYKPE 93 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~-----~l~~~~~~~~~~~elNiE--g~p---~~e~i~ia~~ikP~ 93 (261)
+.+.|..|.++||.-+-+|.|. |.+|-.|-+++ .+++-| +.-+|+- +.. .++-+..+...+|+
T Consensus 34 ia~~a~~c~~AGAsivHlH~Rd~~dG~~s~d~~~y~eii~~IR~~~-----d~ii~~TTgg~~~~~~e~r~~~v~~~~Pd 108 (311)
T 3e49_A 34 VAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNT-----DAVINLTTGGSPHXTVEERLRPATHYXPE 108 (311)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHC-----CCEEEECSCSCTTSCHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-----CCEEEECCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 9999999998187389977357777990789999999999998608-----96354035788888667777889874202
Q ss_pred EEEEEECC-----CCCCCCCCCCC---------------HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC
Q ss_conf 28971016-----55533357822---------------13337889999986202696389972544441479999740
Q gi|254780438|r 94 QITLVPDD-----PHQLTSDHGWD---------------FLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLT 153 (261)
Q Consensus 94 qvtLVPe~-----r~elTTegGld---------------v~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~ 153 (261)
++++=+=. ..+.....+|. +......+..+...+++.||++++=+. |+. .+..+..+
T Consensus 109 ~aS~~~gs~nf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~n~~~~~~~~~~~~~e~gi~pe~ei~-d~g--~l~~~~~l 185 (311)
T 3e49_A 109 LASLNXGSXNFGLYPXLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECY-DTS--HLYNLAHF 185 (311)
T ss_dssp EEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEEC-SHH--HHHHHHHH
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEE-CHH--HHHHHHHH
T ss_conf 331233566766422555532112332034441366626328999999999999974985059995-389--99999999
Q ss_pred -------CCCEEEECCCCCHHH
Q ss_conf -------661465112111024
Q gi|254780438|r 154 -------GADCIELYTGPYGAC 168 (261)
Q Consensus 154 -------Gad~VElhTG~Ya~a 168 (261)
+.-.+-|.-|.|.-.
T Consensus 186 ~~~Gll~~p~~~~~vlG~~~g~ 207 (311)
T 3e49_A 186 VDRKLATPPFFVQTVFGLLGGI 207 (311)
T ss_dssp HHTTCSCSSEEEEEEESCTTSC
T ss_pred HHCCCCCCCCEEEEEECCCCCC
T ss_conf 9757778996599995246666
No 6
>>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus} (A:)
Probab=96.29 E-value=0.028 Score=36.71 Aligned_cols=174 Identities=17% Similarity=0.165 Sum_probs=99.5
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHH-HHHHHCCCCCCCEEEEE--E-----CCCHHHHHHHHHHCCCEE
Q ss_conf 8999999997499899982478--833488899999-88740001367415888--3-----485689999985072128
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPE-IRRLIDEQFPKAELNIE--G-----YPNETFLNLCERYKPEQI 95 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~-l~~~~~~~~~~~elNiE--g-----~p~~e~i~ia~~ikP~qv 95 (261)
+.+.|..|.++||.-+-+|+|. |-+|-.|-+++. +-..+.+.. ++-+|+- + ...++-+..+...+|+++
T Consensus 34 ia~~A~~c~~AGAsivHlH~Rdp~dG~~s~d~~~y~eii~~Ir~~~-d~ii~~TTg~~g~~~~~~e~r~~~i~~~~Pd~a 112 (314)
T 3lot_A 34 IVEEAVKAAEAGAGXVHIHARDPKDGRPTTDVEVFRYICREIKKQS-DVVINVTTGGGGTLGIPVEERAKVVPALKPEIA 112 (314)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHHC-CCEEEECSSTTGGGTCCHHHHTTHHHHHCCSEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 9999999998256389977257778981789899999999998618-977998458887778898999999876182100
Q ss_pred EEEEC------CCCCCCC-CCCC-------------CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH---H
Q ss_conf 97101------6555333-5782-------------2133378899999862026963899725444414799997---4
Q gi|254780438|r 96 TLVPD------DPHQLTS-DHGW-------------DFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAK---L 152 (261)
Q Consensus 96 tLVPe------~r~elTT-egGl-------------dv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~---~ 152 (261)
++=+= ....... +.|+ -.......+..+...+++.||++++=+. |+. .+..+. +
T Consensus 113 sln~Gs~nf~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~N~~~~~~~~~~~~~e~gi~pe~e~f-d~g--~l~~~~~l~~ 189 (314)
T 3lot_A 113 TFNXGSXNFAIHPLLKKYKEFKYDWEPEYLEXTRDIVFRNTFKDLEALSRIFKENDTKPELECY-DIG--QIYNTAFXFH 189 (314)
T ss_dssp EEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEEC-SHH--HHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEC-CHH--HHHHHHHHHH
T ss_conf 2443455445411232000022333503223455503218999999999999983996248953-788--9999999997
Q ss_pred CCC----CEEEEC---CCCCHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 066----146511---2111024443564336668-----------------89998766541562352078989
Q gi|254780438|r 153 TGA----DCIELY---TGPYGACYNNPQQERIFLN-----------------KLAITAQLAQKMDLQINAGHDLT 203 (261)
Q Consensus 153 ~Ga----d~VElh---TG~Ya~a~~~~~~~~~el~-----------------~i~~aa~~A~~lgL~VnAGHgLn 203 (261)
.|. -.+-|. .|-+......-......+. .--.+...|..+|..|-.|=.=|
T Consensus 190 ~G~l~~p~~~~~vlG~~~g~~~~~~~l~~~~~~~~~~~~~~~~~wsv~~~G~~~~~~~~~Ai~~GGhvRVGlED~ 264 (314)
T 3lot_A 190 EGYLEPPLRLQFIHGILGGIGTAVEDVLFXKQTADRLIGRENYTWSLVGAGRFQXPLGTLAVIXGGDVRVGLEDS 264 (314)
T ss_dssp TTCSCSSEEEEEEECCBTSCCCCHHHHHHHHHHHHHHTCGGGEEEEEEECGGGHHHHHHHHHHTTCEEEESTTTC
T ss_pred CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEECCCCC
T ss_conf 578789956999861057889974568999998775066779638996377555199999998399639726755
No 7
>>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} (A:)
Probab=95.84 E-value=0.15 Score=31.76 Aligned_cols=219 Identities=11% Similarity=0.102 Sum_probs=138.8
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCC-CCCHHHHHHHHHHHCCCCCCCEEEEE---ECCC--------------HHHHHH
Q ss_conf 98999999997499899982478833-48889999988740001367415888---3485--------------689999
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQR-HIRYTDLPEIRRLIDEQFPKAELNIE---GYPN--------------ETFLNL 86 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrR-HI~~~Dv~~l~~~~~~~~~~~elNiE---g~p~--------------~e~i~i 86 (261)
++.++...+.++|.+||-+++-.+.. ...+.++..+++.+.++ ++++-.= ++.. .+++++
T Consensus 15 ~l~~~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 92 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTXDKLPEYLKDHSLDDLAEYFQTH--HIKPLALNALVFFNNRDEKGHNEIITEFKGXXET 92 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTS--SCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHC--CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999998298989846677870114830699999999981--9938999677777899989999999999999999
Q ss_pred HHHHCCCEEEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC------CHHHHHHHHCCCCEEE
Q ss_conf 98507212897101-6555333578221333788999998620269638997254444------1479999740661465
Q gi|254780438|r 87 CERYKPEQITLVPD-DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN------EHSLQAAKLTGADCIE 159 (261)
Q Consensus 87 a~~ikP~qvtLVPe-~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~------q~~i~~a~~~Gad~VE 159 (261)
+.......+.+.|- .+...++|-.|+- -.+.++++.....+.|+++.+--.+.+. ...+...++++.+.+=
T Consensus 93 a~~lg~~~i~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~a~~~Gv~l~~E~~~~~~~~~~~~~~~~~li~~~~~~~~g 170 (278)
T 1i60_A 93 CKTLGVKYVVAVPLVTEQKIVKEEIKKS--SVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNRDNVG 170 (278)
T ss_dssp HHHHTCCEEEEECCBCSSCCCHHHHHHH--HHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCCTTEE
T ss_pred HHHHCCCEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEE
T ss_conf 9982939899926988777787999999--99999999999997499899983577755568999999999851166378
Q ss_pred E--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CEEEECCC-CCHHHHHHHHHHCCCCEEEEEHH
Q ss_conf 1--121110244435643366688999876654156------------23520789-89877999997369963884259
Q gi|254780438|r 160 L--YTGPYGACYNNPQQERIFLNKLAITAQLAQKMD------------LQINAGHD-LTIQNIPNLINAIPYISEISVGH 224 (261)
Q Consensus 160 l--hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg------------L~VnAGHg-Ln~~Nl~~~i~~Ip~I~EvsIGH 224 (261)
+ =||.+... +......+.++..-..+.|-.+ ..+--|.| +++..+-..+....+=-=+++=+
T Consensus 171 ~~~D~~h~~~~---g~~~~~~~~~~~~~i~~~H~~D~~~~~~~~~~~~~~~~~G~G~id~~~i~~~L~~~g~~g~i~~E~ 247 (278)
T 1i60_A 171 LVLDSFHFHAX---GSNIESLKQADGKKIFIYHIDDTEDFPIGFLTDEDRVWPGQGAIDLDAHLSALKEIGFSDVVSVEL 247 (278)
T ss_dssp EEEEHHHHHHT---TCCHHHHHTSCGGGEEEEEECEECCCCTTTCCGGGEESTTSSSSCHHHHHHHHHHTTCCSEEEECC
T ss_pred EEECHHHHHHC---CCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEC
T ss_conf 98541788864---999999998604516799993367776443456577599782248999999999849971799960
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ---99999999409999999999997410
Q gi|254780438|r 225 ---AFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 225 ---aiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
..-.+...-.+..++.-+++++++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~l~~~l~~a~ 276 (278)
T 1i60_A 248 FRPEYYKLTAEEAIQTAKKTTVDVVSKYF 276 (278)
T ss_dssp CCGGGGGSCHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 68200018999999999999999999984
No 8
>>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} (A:1-333)
Probab=95.47 E-value=0.26 Score=30.10 Aligned_cols=128 Identities=16% Similarity=0.085 Sum_probs=82.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCC-C------CEEEEEE------CCCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 55533357822133378899999862026-9------6389972------544441479999740661465112111024
Q gi|254780438|r 102 PHQLTSDHGWDFLQNQALLTKTVARLHNL-G------SRISLFA------DGNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 102 r~elTTegGldv~~~~~~L~~~i~~l~~~-g------irvSLFI------Dpd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
.+..|-+-|=++.....++.++|+.+++. | +|+|..= +++....-++...+.|+|.+.+|.|.|..-
T Consensus 176 ~n~r~d~yGgsl~nr~r~~~eii~air~~~g~~~~v~~Rl~~~~~~~~~~~~~~~~~~~~~l~~~g~d~l~v~~~~~~~~ 255 (333)
T 1ps9_A 176 TNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEAR 255 (333)
T ss_dssp TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCC
T ss_conf 78888767878778789999999989866299735888436511256899889999999999982873030223543456
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 443564336--668899987665415623520789898779999973699638842599999999
Q gi|254780438|r 169 YNNPQQERI--FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 169 ~~~~~~~~~--el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
+........ ....+.+..+-+.+..+. -.|--.+.+.....++ -...+=|.||-+++++-=
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~pvi-~~G~i~~~~~a~~~l~-~g~~D~V~igR~~ladP~ 318 (333)
T 1ps9_A 256 IPTIATPVPRGAFSWVTRKLKGHVSLPLV-TTNRINDPQVADDILS-RGDADMVSMARPFLADAE 318 (333)
T ss_dssp SCSSSTTSCTTTTHHHHHHHTTSCSSCEE-ECSSCCSHHHHHHHHH-TTSCSEEEESTHHHHCTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEE-EECCCCCHHHHHHHHH-CCCCCEEHHHHHHHHCCH
T ss_conf 76556776511669999999741577789-8379777999999998-799876411359870943
No 9
>>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} (A:523-742,A:762-821)
Probab=95.21 E-value=0.31 Score=29.55 Aligned_cols=153 Identities=15% Similarity=0.081 Sum_probs=70.1
Q ss_pred CEEEEEECC--CHHHHH---HHHHHCCCEEEEEECCCCCCCCCCCCC-HHHHHHHHHHHHHHHCC-CCCEEEEEECCCCC
Q ss_conf 415888348--568999---998507212897101655533357822-13337889999986202-69638997254444
Q gi|254780438|r 71 AELNIEGYP--NETFLN---LCERYKPEQITLVPDDPHQLTSDHGWD-FLQNQALLTKTVARLHN-LGSRISLFADGNGN 143 (261)
Q Consensus 71 ~elNiEg~p--~~e~i~---ia~~ikP~qvtLVPe~r~elTTegGld-v~~~~~~L~~~i~~l~~-~girvSLFIDpd~~ 143 (261)
.++..+... -+++.. ++.+..-+.+-+-=--+..+.+.++.. ......++.+.+...++ .++.+++-+-++++
T Consensus 114 ~~l~~~~~~~~~~~~~~aa~~~~~~g~d~Iein~~~~~~~~~~~~g~~~~~~~~~~~e~i~~v~~~~~~pv~vk~r~~~~ 193 (280)
T 1gte_A 114 IVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVT 193 (280)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSS
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHH
T ss_conf 34577568899999999999745358888999767899987433343110168999999999861789987999799827
Q ss_pred C--HHHHHHHHCCCCEEEECCCCCHHHHHHHH---HHHHHHHHHHHHHHHHHHCCCEEEECCCCC-HHHHHHHHHHCCCC
Q ss_conf 1--47999974066146511211102444356---433666889998766541562352078989-87799999736996
Q gi|254780438|r 144 E--HSLQAAKLTGADCIELYTGPYGACYNNPQ---QERIFLNKLAITAQLAQKMDLQINAGHDLT-IQNIPNLINAIPYI 217 (261)
Q Consensus 144 q--~~i~~a~~~Gad~VElhTG~Ya~a~~~~~---~~~~el~~i~~aa~~A~~lgL~VnAGHgLn-~~Nl~~~i~~Ip~I 217 (261)
+ ...+.+.+.|+|.|.+|-+.+..-..... ....-+.-+....+... ++.|-|.=|+. -+.+...++ + +-
T Consensus 194 d~~e~a~~l~e~Gvd~I~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ii~~ggi~~~~~~~~~~~-~-GA 269 (280)
T 1gte_A 194 DIVSIARAAKEGGADGVTATNTVSGLMYGGVSGTAIRPIALRAVTTIARALP--GFPILATGGIDSAESGLQFLH-S-GA 269 (280)
T ss_dssp CHHHHHHHHHHHTCSEEEECCCEEECCCEEEESGGGHHHHHHHHHHHHHHST--TCCEEEESSCCSHHHHHHHHH-T-TC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHCC--CCCEEEECCCCCHHHHHHHHH-C-CC
T ss_conf 8999999999859969999567776556700278889999999999998769--987999899899999999998-6-99
Q ss_pred EEEEEHHHHH
Q ss_conf 3884259999
Q gi|254780438|r 218 SEISVGHAFA 227 (261)
Q Consensus 218 ~EvsIGHaiI 227 (261)
+=|++|-+++
T Consensus 270 ~~v~~~~~~~ 279 (280)
T 1gte_A 270 SVLQVCSAVQ 279 (280)
T ss_dssp SEEEESHHHH
T ss_pred CHHHHHHHHH
T ss_conf 7998769999
No 10
>>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structural genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis} (A:)
Probab=95.07 E-value=0.28 Score=29.89 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=97.4
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHHHHHHHCCCCCCCEEE-EEECCC--------------HH
Q ss_conf 8868998999999997499899982478--833488899999887400013674158-883485--------------68
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPEIRRLIDEQFPKAELN-IEGYPN--------------ET 82 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~l~~~~~~~~~~~elN-iEg~p~--------------~e 82 (261)
....-++.++...+.++|.+||-+.+.. +.......++..+++.+... ++++- +-+++. .+
T Consensus 11 ~~~~~~l~~~l~~~~~~G~d~iEi~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (286)
T 3dx5_A 11 RHQLISFTDIVQFAYENGFEGIELWGTHAQNLYXQEYETTERELNCLKDK--TLEITXISDYLDISLSADFEKTIEKCEQ 88 (286)
T ss_dssp TTSCCCHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGG--TCCEEEEECCCCCSTTSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 37999999999999981999999725665444535878999999999964--9956751577677774228999999999
Q ss_pred HHHHHHHHCCCEEEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC----CCHHHHHHHHCCCC-
Q ss_conf 9999985072128971016-55533357822133378899999862026963899725444----41479999740661-
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDD-PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG----NEHSLQAAKLTGAD- 156 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~-r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~----~q~~i~~a~~~Gad- 156 (261)
.++++.......+.+.|-. +...+.+-.|+. -.+.+..+.....+.|+++.+--.+.. .....+....++.+
T Consensus 89 ~i~~a~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~a~~~gi~l~~E~~~~~~~~~~~~~~~~~~~~~~~~ 166 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAGQKGSADFSQQERQE--YVNRIRXICELFAQHNXYVLLETHPNTLTDTLPSTLELLGEVDHPN 166 (286)
T ss_dssp HHHHHHHHTCCEEEECSCSSCGGGSCHHHHHH--HHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHCCCEEEECCCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf 99999995999899656877777680999999--9999999999999859734431541215688999999999713312
Q ss_pred -EEEECCCCCHHH
Q ss_conf -465112111024
Q gi|254780438|r 157 -CIELYTGPYGAC 168 (261)
Q Consensus 157 -~VElhTG~Ya~a 168 (261)
.+-+=||.+..+
T Consensus 167 ~gi~~D~~H~~~~ 179 (286)
T 3dx5_A 167 LKINLDFLHIWES 179 (286)
T ss_dssp EEEEEEHHHHHHT
T ss_pred CCCCCHHHHHHHH
T ss_conf 4522103788870
No 11
>>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif, structural genomics; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A (A:)
Probab=95.02 E-value=0.31 Score=29.57 Aligned_cols=220 Identities=9% Similarity=-0.014 Sum_probs=137.6
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCC-----CCCCCHHHHHHHHHHHCCCCCCCEEEEEEC----------CC-------
Q ss_conf 89989999999974998999824788-----334888999998874000136741588834----------85-------
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPD-----QRHIRYTDLPEIRRLIDEQFPKAELNIEGY----------PN------- 80 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~D-----rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~----------p~------- 80 (261)
.-++.+....+.++|.+||-+.+..- .....++.+..+++.+... .++...-.. +.
T Consensus 29 ~~~l~~~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (295)
T 3cqj_A 29 GECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVET--GVRVPSMCLSAHRRFPLGSEDDAVRAQG 106 (295)
T ss_dssp CSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHH--CCEEEEEEEGGGGTSCTTCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHC--CCEEEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 98999999999985999899960576222134689999999999999983--9955787524334799999799999999
Q ss_pred ----HHHHHHHHHHCCCEEEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC----CHHHHHHH
Q ss_conf ----689999985072128971016-555333578221333788999998620269638997254444----14799997
Q gi|254780438|r 81 ----ETFLNLCERYKPEQITLVPDD-PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN----EHSLQAAK 151 (261)
Q Consensus 81 ----~e~i~ia~~ikP~qvtLVPe~-r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~----q~~i~~a~ 151 (261)
.+.++++..+....+++.|-. +.+.+++--|+. -.+.|+.+.+...+.|+.+++-..+... ....+..+
T Consensus 107 ~~~~~~~i~~a~~lg~~~i~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~gv~l~~e~~~~~~~~~~~~~~~l~~ 184 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRR--FRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAH 184 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHH--HHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 99999999999864999899947988766895999999--9999999999999609899971346766599899988887
Q ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE---------EEECCC-CCHHHHHHHHHHCCCCEEEE
Q ss_conf 40661465112111024443564336668899987665415623---------520789-89877999997369963884
Q gi|254780438|r 152 LTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQ---------INAGHD-LTIQNIPNLINAIPYISEIS 221 (261)
Q Consensus 152 ~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~---------VnAGHg-Ln~~Nl~~~i~~Ip~I~Evs 221 (261)
.++.+.+-+.--.+ +.+..+..... -+.....+.....+. +..|-| +++..+-..+.+..+=--++
T Consensus 185 ~v~~~~~g~~~D~~-h~~~~~~~~~~---~~~~~~~~i~~vHi~D~~~~~~~~~~~g~G~id~~~~~~~L~~~gy~g~~~ 260 (295)
T 3cqj_A 185 YLNNPWFQLYPDIG-NLSAWDNDVQM---ELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPYL 260 (295)
T ss_dssp HHCCTTEEEECBHH-HHHSSSCCHHH---HHHHTGGGBCCEEECEEETTEEEEECTTSSSCCHHHHHHHHHHTTCCSCEE
T ss_pred HCCCCCEEEEECCH-HHHHHCCCHHH---HHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 34997448983418-98886059999---999741111169853367983352489985729999999999979972799
Q ss_pred EHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 259-99999999409999999999997410
Q gi|254780438|r 222 VGH-AFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 222 IGH-aiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
+=. .--.+.-.-++.+++..+++++++..
T Consensus 261 ~E~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 290 (295)
T 3cqj_A 261 IEMWSETAEDPAAEVAKARDWVKARMAKAG 290 (295)
T ss_dssp ECCCGGGSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 983588778999999999999999999808
No 12
>>3e02_A Uncharacterized protein DUF849; YP_555544.1, protein of unknown function (DUF849), structural genomics; HET: MSE; 1.90A {Burkholderia xenovorans LB400} (A:)
Probab=94.98 E-value=0.36 Score=29.11 Aligned_cols=170 Identities=15% Similarity=0.158 Sum_probs=101.6
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHH-----HHHHHCCCCCCCEEEEEE-----CCCHHHHHHHHHHCCC
Q ss_conf 8999999997499899982478--833488899999-----887400013674158883-----4856899999850721
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPE-----IRRLIDEQFPKAELNIEG-----YPNETFLNLCERYKPE 93 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~-----l~~~~~~~~~~~elNiEg-----~p~~e~i~ia~~ikP~ 93 (261)
+.+.|..|.++||.-+-+|+|. |.+|-.|-|++. +++-| +.-+|+-- ..-++-+..+...+|+
T Consensus 34 ia~~a~~c~~AGAsivHlH~Rd~~dG~~s~d~~~y~e~i~~IR~~~-----~~ii~~Ttg~~~~~~~~~R~~~i~~l~Pd 108 (311)
T 3e02_A 34 IVKEGVAAAEAGAAXLHLHARDPLNGRPSQDPDLFXRFLPQLKERT-----DAILNITTGGGLGXSLDERLAPARAARPE 108 (311)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHC-----CCEEEECSSCSTTCCHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC-----CCEEEEECCCCCCCCCHHHHHHHHHCCCC
T ss_conf 9999999998287489988558989890689999999999999759-----93587521577887620246666534887
Q ss_pred EEEE-----EECCCCCCCCCCCCC---------------HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH-
Q ss_conf 2897-----101655533357822---------------1333788999998620269638997254444147999974-
Q gi|254780438|r 94 QITL-----VPDDPHQLTSDHGWD---------------FLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL- 152 (261)
Q Consensus 94 qvtL-----VPe~r~elTTegGld---------------v~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~- 152 (261)
++++ .++...+.+....+. +......+..+...+++.|++.++=+. |+.. +..+..
T Consensus 109 ~aS~~~gs~n~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~n~~~~~~~~~~~~~e~gi~pe~e~~-d~g~--i~~~~~l 185 (311)
T 3e02_A 109 VASXNXGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGXTELGASGTRFEFECY-DVGH--LYNLAHF 185 (311)
T ss_dssp EEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEEC-SHHH--HHHHHHH
T ss_pred EEEEECCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEEE-CHHH--HHHHHHH
T ss_conf 564000344666300000011204420233325665615338999999999999862886438972-7999--9999999
Q ss_pred --CC----CCEEEECCCCCHHHHHHHHHHHHH---HHH----------------HHHHHHHHHHCCCEEEECCCCC
Q ss_conf --06----614651121110244435643366---688----------------9998766541562352078989
Q gi|254780438|r 153 --TG----ADCIELYTGPYGACYNNPQQERIF---LNK----------------LAITAQLAQKMDLQINAGHDLT 203 (261)
Q Consensus 153 --~G----ad~VElhTG~Ya~a~~~~~~~~~e---l~~----------------i~~aa~~A~~lgL~VnAGHgLn 203 (261)
.| .-.+.|+-|.-.-....+..-.-. +.+ -..+...|..+|..|-.|=.=|
T Consensus 186 ~~~G~l~~p~~~~~vlG~~~g~~a~p~~l~~~~~~~~~~~p~~~~w~~~g~G~~~~~~~~~A~~~GGhvRVGlED~ 261 (311)
T 3e02_A 186 VDRKLVEPPFFLQCVFGILGGIGADPENLLHXRTIADRLFGQDYYLSVLAAGRHQXPFVTXSAILGGNVRVGLEDS 261 (311)
T ss_dssp HHTTSSCSCEEEEEEECCBTSCCSCHHHHHHHHHHHHHHHTTSEEEEEEECGGGHHHHHHHHHHTTCEEEESTTTC
T ss_pred HHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 9717878996549998157777888056999999998548877079861653646999999998099628824644
No 13
>>3chv_A Prokaryotic domain of unknown function (DUF849) with A TIM barrel fold; YP_164873.1; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A (A:)
Probab=94.89 E-value=0.19 Score=31.03 Aligned_cols=135 Identities=14% Similarity=0.048 Sum_probs=92.7
Q ss_pred HHHHHHHHHHCCCCEEEEECCC-CCCCCCHHHHH-HHHHHHCCCCCCCEEEEEECC---CHHHHHHHHHHCCCEEEEEEC
Q ss_conf 8999999997499899982478-83348889999-988740001367415888348---568999998507212897101
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP-DQRHIRYTDLP-EIRRLIDEQFPKAELNIEGYP---NETFLNLCERYKPEQITLVPD 100 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~-DrRHI~~~Dv~-~l~~~~~~~~~~~elNiEg~p---~~e~i~ia~~ikP~qvtLVPe 100 (261)
+.+.|..|.++||.-+-+|.|. |-||-.|-+.+ ++-.-+....+++-+|+-... .++-.......+|+++++-+-
T Consensus 36 ia~~a~~c~~AGAaivHlH~R~~dG~~s~d~~~y~e~i~~Ir~~~pd~ii~~ttgg~~~~~e~~~~~~~~~Pd~asl~~g 115 (284)
T 3chv_A 36 QVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGXIVQFSTGGRSGAGQARGGXLPLKPDXASLSVG 115 (284)
T ss_dssp HHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTGGGCCSEEEECCS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC
T ss_conf 99999999981886899873289949777889999999999986682079745887777388874203343455543222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH---CC----CCEEEECCCCCHH
Q ss_conf 6555333578221333788999998620269638997254444147999974---06----6146511211102
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL---TG----ADCIELYTGPYGA 167 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~---~G----ad~VElhTG~Ya~ 167 (261)
+.--+.+. .......+..+...+++.||++.+=+- |+.. +..+.. -| .-.+-|.-|.|.-
T Consensus 116 ---s~n~~~~~-~~n~~~~~~~~~~~~~e~gi~pe~ei~-d~g~--l~~~~~l~~~Gll~~p~~~~~vlg~~~g 182 (284)
T 3chv_A 116 ---SNNFPSRV-YENPPDLVDWLAAQXRSYRVTPEIEAF-DLSH--ILRAIDXHGRGLLYGKLYVQFVXGVKNA 182 (284)
T ss_dssp ---CEECSSSE-ECCCHHHHHHHHHHHHHHTCEEEEEES-SHHH--HHHHHHHHHTTCSCSSCEEEEEECCTTS
T ss_pred ---CCCCCCHH-HHCCHHHHHHHHHHHHHHCCCCEEEEE-CHHH--HHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf ---34543233-416799999999999985666505887-4999--9999999982886788527999545667
No 14
>>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} (A:1-343)
Probab=94.83 E-value=0.39 Score=28.85 Aligned_cols=130 Identities=9% Similarity=0.032 Sum_probs=80.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC---CCEEEEEECCC--------CCCHHH---HHHHHCCCCEEEECCCCCH
Q ss_conf 655533357822133378899999862026---96389972544--------441479---9997406614651121110
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNL---GSRISLFADGN--------GNEHSL---QAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~---girvSLFIDpd--------~~q~~i---~~a~~~Gad~VElhTG~Ya 166 (261)
..+..|.+-|=++.....++.++++.+++. .+.|.+=+.++ ..+..+ ....+.|+|.+.+|.|.|.
T Consensus 183 ~~n~r~d~yGgsl~nr~r~~~eii~air~~~~~~~~V~iR~~~~d~~~~g~~~~e~~~~~~~~l~~~g~d~i~v~~~~~~ 262 (343)
T 1o94_A 183 YYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIA 262 (343)
T ss_dssp TTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCST
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCC
T ss_conf 37899643578856651789999998885508986589997430055899775667789999999844444241346522
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHCCCEE-EECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 2444356--43366688999876654156235-20789898779999973699638842599999999
Q gi|254780438|r 167 ACYNNPQ--QERIFLNKLAITAQLAQKMDLQI-NAGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 167 ~a~~~~~--~~~~el~~i~~aa~~A~~lgL~V-nAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
....... ...........+.........-| -.|.-.+.+....++++ ...+=|.+|-.++++-=
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~s~~~~~~~l~~-g~~D~V~~gR~~ladP~ 329 (343)
T 1o94_A 263 EWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTK-GYADIIGCARPSIADPF 329 (343)
T ss_dssp TGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHT-TSCSBEEESHHHHHCTT
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCCEEECCHHHHCCCC
T ss_conf 32335566545664444047999876417852145896899999999987-99874630569871930
No 15
>>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} (A:)
Probab=94.53 E-value=0.46 Score=28.38 Aligned_cols=194 Identities=14% Similarity=0.089 Sum_probs=125.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 78868998999999997499899982478833488899999887400013674158883485689999985072128971
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLV 98 (261)
.+.++++..+.+..++++|++.|-+........-.-..+...+..+. ..-..-....+...+.+...+.+.+-
T Consensus 21 ~~~~~~~~~~~~~~~~~~G~~~i~i~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~gad~i~~~ 93 (215)
T 1xi3_A 21 TDRRLKPEVESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTR-------EYDALFFVDDRVDVALAVDADGVQLG 93 (215)
T ss_dssp CCTTTSCHHHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHH-------HTTCEEEEESCHHHHHHHTCSEEEEC
T ss_pred ECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHH-------HCCCEEEECCHHHHHHHCCCCEEEEC
T ss_conf 08852778999999998799899982799999999999999998776-------21937995327999875057878753
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
+.... ....+-...++.+..-+. +++ .+..+.+.|+|.|-+++..+........
T Consensus 94 ~~~~~------------------~~~~~~~~~~~~~~~~~~-t~~--e~~~a~~~g~d~i~~~~~~~t~~~~~~~----- 147 (215)
T 1xi3_A 94 PEDMP------------------IEVAKEIAPNLIIGASVY-SLE--EALEAEKKGADYLGAGSVFPTKTKEDAR----- 147 (215)
T ss_dssp TTSCC------------------HHHHHHHCTTSEEEEEES-SHH--HHHHHHHHTCSEEEEECSSCC----CCC-----
T ss_pred HHHHH------------------HHHHHHCCCCCCCCCCCC-CHH--HHHHHHHCCCCEEEEECCCCCCCCCCCC-----
T ss_conf 01333------------------555431265422134545-099--9998874597789860132256655553-----
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
..............++.|-||=|.+-+|+..+++ -+.+=|-||-+|... -...++++++++++++.+
T Consensus 148 ~~~~~~~~~~~~~~~ipi~~~GGi~~~~i~~~~~--~GadgV~vGsai~~~---~dp~~~~~~~~~~~~~~r 214 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLK--TGVDGIAVISAVMGA---EDVRKATEELRKIVEEVL 214 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHT--TTCSEEEESHHHHTS---SSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH--HCCCEEEEHHHHHCC---CCHHHHHHHHHHHHHHHH
T ss_conf 2226888888872578816766899999999998--199899973997779---999999999999999963
No 16
>>1xp3_A Endonuclease IV; NFO, DNA replication, DNA recombination, DNA repair, spine, structural genomics, structural proteomics in europe, hydrolase; 2.57A {Bacillus anthracis} (A:)
Probab=94.52 E-value=0.2 Score=30.86 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCC----CCCCHHHHHHHHHHHCC
Q ss_conf 99899999999749989998247883----34888999998874000
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQ----RHIRYTDLPEIRRLIDE 66 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~Dr----RHI~~~Dv~~l~~~~~~ 66 (261)
-++.++...+.++|.++|-+..+..+ ....+.++..+++.+.+
T Consensus 23 ~~~~~~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 69 (307)
T 1xp3_A 23 KMLLAASEEAVSYGATTFMIYTGAPQNTRRKPIEELNIEAGRKHMEQ 69 (307)
T ss_dssp STHHHHHHHHHTTTCSSEEECSSCTTCCCCCCGGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 47899999999769989999799988899999999999999999998
No 17
>>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} (A:)
Probab=94.27 E-value=0.27 Score=29.92 Aligned_cols=113 Identities=10% Similarity=0.096 Sum_probs=63.7
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCC----CCCCCHHHHHHHHHHHCCCCCCCE-EEE----EE---CCC-----------
Q ss_conf 9989999999974998999824788----334888999998874000136741-588----83---485-----------
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPD----QRHIRYTDLPEIRRLIDEQFPKAE-LNI----EG---YPN----------- 80 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~D----rRHI~~~Dv~~l~~~~~~~~~~~e-lNi----Eg---~p~----------- 80 (261)
=++.++...+.++|.+||-+..... ...-.++++..+++.+.++--.+- ++. .. ++.
T Consensus 12 ~~l~~~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAF 91 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 34999999999759999999799977678899999999999999998599852899717730002685589999999999
Q ss_pred HHHHHHHHHHCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 6899999850721289710-165553335782213337889999986202696389972
Q gi|254780438|r 81 ETFLNLCERYKPEQITLVP-DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 81 ~e~i~ia~~ikP~qvtLVP-e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFI 138 (261)
.+.++++.+.....+++-| ..+.+.+++..|+. ..+.+..+....++.|+++.+=.
T Consensus 92 ~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~--~~~~l~~~~~~a~~~g~~~~~e~ 148 (285)
T 1qtw_A 92 IDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR--IAESINIALDKTQGVTAVIENTA 148 (285)
T ss_dssp HHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHH--HHHHHHHHHHHCSSCEEEEECCC
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCCEEEECC
T ss_conf 9999999981997217826877887558999999--99987999887328851365215
No 18
>>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* (A:)
Probab=94.19 E-value=0.54 Score=27.89 Aligned_cols=214 Identities=10% Similarity=-0.034 Sum_probs=135.7
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC-CHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998----247883348889999988740001367415888348-56899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP-NETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-~~e~i~ia~~ikP~qvt 96 (261)
.+|+.++.+..+.+.|+|-|-+ .+-........+=+..+++... ..-.+.-+.- -+.|.+.+.+...+.++
T Consensus 10 ~d~~~~~~~~~~~~~g~~~i~l~~~d~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~gad~~~ 85 (231)
T 3ctl_A 10 MDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLAT----KPLDCHLMVTRPQDYIAQLARAGADFIT 85 (231)
T ss_dssp SCGGGHHHHHHHHHTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCC----SCEEEEEESSCGGGTHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC----CCEEEEEEEECCHHHHHHHHHCCCCEEE
T ss_conf 699999999999867999899977569727755638799998740678----7447889885415655677524884366
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+-++... ..+.++++..++.|+.+=+++.+.... ....+...++|.+-+.+--............
T Consensus 86 i~~~~~~--------------~~~~~~i~~~~~~g~~~i~~~~~~t~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (231)
T 3ctl_A 86 LHPETIN--------------GQAFRLIDEIRRHDMKVGLILNPETPV-EAMKYYIHKADKITVMTVDPGFAGQPFIPEM 150 (231)
T ss_dssp ECGGGCT--------------TTHHHHHHHHHHTTCEEEEEECTTCCG-GGGTTTGGGCSEEEEESSCTTCSSCCCCTTH
T ss_pred EECCHHH--------------HHHHHHHHHHHHCCCEEEEEECCCCCH-HHHHHHHHHHHEEEEEEECCCCCCCCCCCCC
T ss_conf 4120010--------------478999988876797799996488524-5667576221279999976666785220330
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66688999876654156235207898987799999736996388425999999999409999999999997410565540
Q gi|254780438|r 177 IFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDNTMRL 256 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~~~~~ 256 (261)
.....-......+...++.+-++=|.+.+|+..+++ -+.+=|-+|-+|+- +.-.+.++.++++++.+++-+..+++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~pI~~~gGI~~~~v~~~~~--~Gad~v~vGsai~~-~~a~~~~~~~~~~~~~i~~~~~~~~~~ 227 (231)
T 3ctl_A 151 LDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMA--AGADVFIVGTSGLF-NHAENIDEAWRIMTAQILAAKSEVQPH 227 (231)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHH--HTCCEEEECTTTTG-GGCSSHHHHHHHHHHHHHC--------
T ss_pred CCEEEHHHHHCCCCCCCCEEEEECCCCHHHHHHHHH--CCCCEEEECCHHHC-CCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 112331232010137982699978999899999998--79999998838972-799899999999999999998537876
Q ss_pred C
Q ss_conf 3
Q gi|254780438|r 257 T 257 (261)
Q Consensus 257 ~ 257 (261)
+
T Consensus 228 ~ 228 (231)
T 3ctl_A 228 A 228 (231)
T ss_dssp -
T ss_pred C
T ss_conf 6
No 19
>>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} (A:)
Probab=93.97 E-value=0.59 Score=27.60 Aligned_cols=206 Identities=8% Similarity=0.016 Sum_probs=122.7
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC-CEEEEEECCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 86899899999999749989998247883348889999988740001367-41588834856899999850721289710
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPK-AELNIEGYPNETFLNLCERYKPEQITLVP 99 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~-~elNiEg~p~~e~i~ia~~ikP~qvtLVP 99 (261)
.++.++.+.++.++++||+.|.+.-..-.+.-...+...+.+.+....+. .-...-.....++++.+.+..=+.+++.-
T Consensus 13 ~d~~~~~e~a~~~~~~Ga~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gad~v~v~~ 92 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEG
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf 59899999999999759998999760485777647085999863016872267100216988989999863997998314
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 16555333578221333788999998620269638997254444147999974066146511211102444356433666
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFL 179 (261)
Q Consensus 100 e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el 179 (261)
... +.+..+....++.+...-+...+.... ..-.+...++|.+.+.+...............+.
T Consensus 93 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (220)
T 2fli_A 93 EST---------------RHIHGALQKIKAAGMKAGVVINPGTPA-TALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEK 156 (220)
T ss_dssp GGC---------------SCHHHHHHHHHHTTSEEEEEECTTSCG-GGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred CCC---------------CCHHHHHHHHHHCCCEEEEEECCCCCH-HHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH
T ss_conf 333---------------366889999985496479996178642-3667688644868899975555666420245788
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88999876654156235207898987799999736996388425999999999409999999999997
Q gi|254780438|r 180 NKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 180 ~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~ 247 (261)
.............++.|-+|-|.+.+|+..+++ -+.+=|-+|-+|.... -..++++.|++.++
T Consensus 157 ~~~~~~~~~~~~~~~~v~~~GGi~~~d~~~~~~--~Gadgv~vGsai~~~~---dp~~~~~~~~~~i~ 219 (220)
T 2fli_A 157 VATVAKWRDEKGLSFDIEVDGGVDNKTIRACYE--AGANVFVAGSYLFKAS---DLVSQVQTLRTALN 219 (220)
T ss_dssp HHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHH--HTCCEEEESHHHHTSS---CHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH--CCCCEEEECHHHHCCC---CHHHHHHHHHHHHC
T ss_conf 888788887509963899868679889999998--7999999775873799---99999999999747
No 20
>>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} (A:)
Probab=93.13 E-value=0.81 Score=26.66 Aligned_cols=204 Identities=8% Similarity=0.027 Sum_probs=127.8
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCC-CCCCCHHHHHHHHHHHCCCCCCCEEEE-EECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 8689989999999974998999824788-334888999998874000136741588-83485689999985072128971
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPRPD-QRHIRYTDLPEIRRLIDEQFPKAELNI-EGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R~D-rRHI~~~Dv~~l~~~~~~~~~~~elNi-Eg~p~~e~i~ia~~ikP~qvtLV 98 (261)
.++|++.++.+.+++.|++-.+++.+-. -+......+..++..... ..+-... -......+++.+.+...+.+++-
T Consensus 10 ~D~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~gad~~~vh 87 (216)
T 1q6o_A 10 LDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPH--KIVLADAKIADAGKILSRMCFEANADWVTVI 87 (216)
T ss_dssp ECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHTTCSEEEEE
T ss_pred ECCCCHHHHHHHHHHCCCCCCEEEECCEEEECCCHHHHHHHHHHCCC--CEEEEEEECCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 66899999999999638875399947221135696999999986899--7067642026778999999998499999985
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
.+. ........+..+++.+..+-+++-+.........+.+.+++.+-++.+-..... ........
T Consensus 88 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~ 152 (216)
T 1q6o_A 88 CCA--------------DINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAA-GVAWGEAD 152 (216)
T ss_dssp TTS--------------CHHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHT-TCCCCHHH
T ss_pred CCC--------------CHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCC-CEECCHHH
T ss_conf 025--------------816899999999862020222023899989999988558671665411457867-87688888
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
+. ...........|-++=|.+.+|+..++ + -+.+=|-+|-+|... ---.+++++|++.+++.|
T Consensus 153 ~~----~~~~~~~~~~~i~~~Gg~~~~~~~~a~-~-~GaD~vvVGsaI~~a---~dp~~~~~~~~~~i~~~r 215 (216)
T 1q6o_A 153 IT----AIKRLSDMGFKVTVTGGLALEDLPLFK-G-IPIHVFIAGRSIRDA---ASPVEAARQFKRSIAELW 215 (216)
T ss_dssp HH----HHHHHHHTTCEEEEESSCCGGGGGGGT-T-SCCSEEEESHHHHTS---SCHHHHHHHHHHHHHHHC
T ss_pred HH----HHHHHHCCCCEEEECCCCCCCCHHHHH-H-CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHH
T ss_conf 99----999853889708647987846899999-8-599999988155279---999999999999999975
No 21
>>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp} (A:)
Probab=92.95 E-value=0.62 Score=27.46 Aligned_cols=131 Identities=10% Similarity=0.061 Sum_probs=84.2
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC-CCHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 989999999974998999824788334888999998874000136741588834-8568999998507212897101655
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGY-PNETFLNLCERYKPEQITLVPDDPH 103 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~-p~~e~i~ia~~ikP~qvtLVPe~r~ 103 (261)
.+..++..+..+||+++++|.....+-..... ..+.. ....=+.+. .+++-...+....++.+.++|....
T Consensus 97 ~~~~~~~~~~~aga~~v~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (246)
T 3inp_A 97 PVDALIESFAKAGATSIVFHPEASEHIDRSLQ--LIKSF------GIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPG 168 (246)
T ss_dssp SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHH--HHHTT------TSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTT
T ss_pred CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH--HHHHC------CCCEEEEEECCCCCHHHHHHHHHHHEEEEEEECCC
T ss_conf 97998889875598578842210117899999--99874------98437898515551016677764422478884268
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 533357822133378899999862026963899725444414799997406614651121110
Q gi|254780438|r 104 QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 104 elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
.......... ..............+..+-++++-..+..++..+.+.|+|.|=.=++=|.
T Consensus 169 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~~~GGi~~~~~~~~~~~Gad~VvvGsaI~~ 228 (246)
T 3inp_A 169 FGGQKFIPAM---LDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFN 228 (246)
T ss_dssp C--CCCCTTH---HHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHHHHT
T ss_pred CCCCHHHHHH---HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHC
T ss_conf 7631023556---77889998760256887179997867899999999879999998968878
No 22
>>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A* (A:)
Probab=92.92 E-value=0.87 Score=26.46 Aligned_cols=127 Identities=13% Similarity=0.079 Sum_probs=82.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCE--EEEEECCC----------CCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 655533357822133378899999862026-963--89972544----------44147999974066146511211102
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSR--ISLFADGN----------GNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~-gir--vSLFIDpd----------~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
..+..|-+-|=++.....++.++|+.+++. +.. +.+-+-++ ....-++...+.|+|.|.+|.|.|..
T Consensus 186 ~~N~R~d~yGgsl~nR~r~~~eii~air~~~~~~~~v~iRi~~~~~~~~~~~~ee~~~la~~l~~~gvd~i~v~~~~~~~ 265 (349)
T 3hgj_A 186 LSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL 265 (349)
T ss_dssp TTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 77988777686877767999999999999728987289967610056899888999999999997398868741464313
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 4443564336668899987665415623520-789898779999973699638842599999999
Q gi|254780438|r 168 CYNNPQQERIFLNKLAITAQLAQKMDLQINA-GHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 168 a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA-GHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
.+....... ....+....+.+.+ +-|=+ |.-.+.+.....++. ..++=|.||-.++++-=
T Consensus 266 ~~~~~~~~~-~~~~~~~~~k~~~~--~pvi~~G~i~~~~~a~~~l~~-~~~D~V~igR~~l~nP~ 326 (349)
T 3hgj_A 266 RVRIPLAPG-FQVPFADAVRKRVG--LRTGAVGLITTPEQAETLLQA-GSADLVLLGRVLLRDPY 326 (349)
T ss_dssp SSCCCCCTT-TTHHHHHHHHHHHC--CEEEECSSCCCHHHHHHHHHT-TSCSEEEESTHHHHCTT
T ss_pred CCCCCCCCC-CCHHHHHHHHHHCC--CCEEEECCCCCHHHHHHHHHC-CCCCHHHHHHHHHHCCH
T ss_conf 334566754-33689999998769--868998893999999999987-99301498899986905
No 23
>>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2iss_A* (A:)
Probab=92.90 E-value=0.12 Score=32.37 Aligned_cols=43 Identities=19% Similarity=0.064 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCC---------CCCCCHHHHHHHHHHHC
Q ss_conf 89989999999974998999824788---------33488899999887400
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPD---------QRHIRYTDLPEIRRLID 65 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~D---------rRHI~~~Dv~~l~~~~~ 65 (261)
+.+++++|+.++++||+.||||.|-+ ..+...+++..+++-+.
T Consensus 27 ~~~~~~~A~~~e~aGa~~ItVhgRt~~q~~~~~~~~~~~~~~~i~~ik~~v~ 78 (297)
T 2zbt_A 27 DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVS 78 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCS
T ss_pred EECCHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf 8378999999987175379875357777886049453599899999998388
No 24
>>2q02_A Putative cytoplasmic protein; NP_463296.1, structural genomics, joint center for structural genomics, JCSG; 2.40A {Salmonella typhimurium LT2} (A:)
Probab=92.84 E-value=0.52 Score=28.00 Aligned_cols=138 Identities=9% Similarity=-0.007 Sum_probs=80.5
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCC-CCCCHHHHHHHHHHHCCCCCCCEE-EEEECCC------------HHHHHHHH
Q ss_conf 899899999999749989998247883-348889999988740001367415-8883485------------68999998
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQ-RHIRYTDLPEIRRLIDEQFPKAEL-NIEGYPN------------ETFLNLCE 88 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~Dr-RHI~~~Dv~~l~~~~~~~~~~~el-NiEg~p~------------~e~i~ia~ 88 (261)
.-++.++...+.++|.++|=+...... -...+.++..+++.+..+ ++++ .+..... .+.++++.
T Consensus 18 ~~~~~~~~~~~~~~G~~~iel~~~~~~~~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 95 (272)
T 2q02_A 18 GLSIEAFFRLVKRLEFNKVELRNDXPSGSVTDDLNYNQVRNLAEKY--GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQ 95 (272)
T ss_dssp TSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHT--TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999997099989996266643234777799999999983--99668861136777855889998999999999
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-------CCCCHHHHHHHHCCCC-EEEE
Q ss_conf 5072128971016555333578221333788999998620269638997254-------4441479999740661-4651
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG-------NGNEHSLQAAKLTGAD-CIEL 160 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp-------d~~q~~i~~a~~~Gad-~VEl 160 (261)
......+.+-+-... .+..| ..-.+.++.......+.|+++.+=..+ +++ ...+....++.+ .+-+
T Consensus 96 ~lg~~~i~~~~~~~~---~~~~~--~~~~~~l~~l~~~a~~~Gv~~~~E~~~~~~~~~~~~~-~~~~l~~~~~~~~gi~~ 169 (272)
T 2q02_A 96 GVGARALVLCPLNDG---TIVPP--EVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAV-WAQQLIREAGSPFKVLL 169 (272)
T ss_dssp HHTCSEEEECCCCSS---BCCCH--HHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHH-HHHHHHHHHTCCCEEEE
T ss_pred HHCCCEEEEECCCCC---CCHHH--HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHH-HHHHHHHHCCCCEEEEC
T ss_conf 862878999638887---50249--9999999999987521483899984676676448899-99999986099723312
Q ss_pred CCCCCHHH
Q ss_conf 12111024
Q gi|254780438|r 161 YTGPYGAC 168 (261)
Q Consensus 161 hTG~Ya~a 168 (261)
=||.+...
T Consensus 170 D~~h~~~~ 177 (272)
T 2q02_A 170 DTFHHHLY 177 (272)
T ss_dssp EHHHHHHC
T ss_pred CHHHHHHH
T ss_conf 01567870
No 25
>>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} (A:)
Probab=92.37 E-value=1 Score=25.98 Aligned_cols=206 Identities=11% Similarity=0.054 Sum_probs=133.4
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECC----CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 86899899999999749989998247----88334888999998874000136741588834856899999850721289
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPR----PDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R----~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
+++.++.+++..+.++|++.|-+... .....-...-+..++.... .....-.-+....++++.+.+...+.++
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~i~i~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~v~~a~~~gad~v~ 92 (228)
T 1h1y_A 16 SDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTK---AYLDCHLMVTNPSDYVEPLAKAGASGFT 92 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCC---SEEEEEEESSCGGGGHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC---CCEEEEECCCCHHHHHHHHHHCCCCEEE
T ss_conf 6999999999999975999899976579837766658378999874588---5166432016677889998745898899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH--HHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 7101655533357822133378899999862026963899725444414--79999740661465112111024443564
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEH--SLQAAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~--~i~~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
+-.+.. ...+...++.++..++.+.+.+-+..+.. ....+...+++.|-...+...........
T Consensus 93 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 158 (228)
T 1h1y_A 93 FHIEVS--------------RDNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMP 158 (228)
T ss_dssp EEGGGC--------------TTTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCG
T ss_pred ECHHCC--------------CCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCH
T ss_conf 721013--------------443899999999779804689768998788888887532146567606678975334568
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 336668899987665415623520789898779999973699638842599999999940999999999999741056
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDN 252 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~ 252 (261)
. ...+. .......-++-|-++=|++.+|+..+++ -+.+=|-+|-+|... ---.+++++|++.+++.+..
T Consensus 159 ~--~~~~~--~~~~~~~~~~pv~~~GGi~~~~~~~~~~--~Gadgv~vGs~i~~~---~dp~~~~~~~~~~i~~~~~~ 227 (228)
T 1h1y_A 159 E--MMEKV--RALRKKYPSLDIEVDGGLGPSTIDVAAS--AGANCIVAGSSIFGA---AEPGEVISALRKSVEGSQNK 227 (228)
T ss_dssp G--GHHHH--HHHHHHCTTSEEEEESSCSTTTHHHHHH--HTCCEEEESHHHHTS---SCHHHHHHHHHHHHHHC---
T ss_pred H--HHHHH--HHHHHCCCCCEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHHHC
T ss_conf 9--99999--9999707886599977889888999997--799999979488679---99999999999999987625
No 26
>>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A* (A:)
Probab=91.93 E-value=1.1 Score=25.64 Aligned_cols=203 Identities=9% Similarity=-0.001 Sum_probs=118.5
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE----
Q ss_conf 8453322144322322078868998999999997499899982478833488899999887400013674158883----
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG---- 77 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg---- 77 (261)
|+|+|+|..-. ++....++.+....+.++|.++|-+.+.. ..+..+.++..+++.+..+ ++.+-.=.
T Consensus 1 mmkig~~~~~~------~~~~~~~~~~~~~~~~~~G~~~vEl~~~~-~~~~~~~~~~~i~~~~~~~--gl~~~~~~~~~~ 71 (290)
T 2qul_A 1 MNKVGMFYTYW------STEWMVDFPATAKRIAGLGFDLMEISLGE-FHNLSDAKKRELKAVADDL--GLTVMCCIGLKS 71 (290)
T ss_dssp CCCEEEETTSS------CSSSCCCHHHHHHHHHHTTCSEEEEESTT-GGGSCHHHHHHHHHHHHHH--TCEEEEEEEECG
T ss_pred CCCEEEEEEEE------ECCCCCCHHHHHHHHHHHCCCEEEECCCC-CCCCCHHHHHHHHHHHHHC--CCCCEECCCCCC
T ss_conf 96134788876------17878899999999998299999978777-5658989999999999985--997011214444
Q ss_pred -----CCC-----------HHHHHHHHHHCCCEEEEEECCCC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf -----485-----------68999998507212897101655-------5333578221333788999998620269638
Q gi|254780438|r 78 -----YPN-----------ETFLNLCERYKPEQITLVPDDPH-------QLTSDHGWDFLQNQALLTKTVARLHNLGSRI 134 (261)
Q Consensus 78 -----~p~-----------~e~i~ia~~ikP~qvtLVPe~r~-------elTTegGldv~~~~~~L~~~i~~l~~~girv 134 (261)
.++ ...++++.......+++.|.... +.+++-.|+ ...+.|..+....++.|+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~i~~a~~lg~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~a~~~Gi~~ 149 (290)
T 2qul_A 72 EYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVD--RAIESVRRVIKVAEDYGIIY 149 (290)
T ss_dssp GGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHH--HHHHHHHTTHHHHHHHTCEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHHHCCEE
T ss_conf 6798998999999999999999999999589568631443223578887435799999--99999999876677625314
Q ss_pred EEEECCCC-------CCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECCC-CCHH
Q ss_conf 99725444-------41479999740661465112111024443564336668899987665415-623520789-8987
Q gi|254780438|r 135 SLFADGNG-------NEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKM-DLQINAGHD-LTIQ 205 (261)
Q Consensus 135 SLFIDpd~-------~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~l-gL~VnAGHg-Ln~~ 205 (261)
.+--.++. .....+..+.++.+.+-++--.+ +.+..+......+.++..-....|-. .-.+--|+| +++.
T Consensus 150 ~iE~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~D~~-h~~~~~~~~~~~l~~~~~~i~~iHi~D~~~~~~G~G~id~~ 228 (290)
T 2qul_A 150 ALEVVNRFEQWLCNDAKEAIAFADAVDSPACKVQLDTF-HMNIEETSFRDAILACKGKMGHFHLGEANRLPPGEGRLPWD 228 (290)
T ss_dssp EEECCCTTTCSSCCSHHHHHHHHHHHCCTTEEEEEEHH-HHHHHCSCHHHHHHHTTTTEEEEEECCTTSCCTTSSCSCHH
T ss_pred EECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCH-HHHHCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCHH
T ss_conf 31135765565558789986655421686422234426-88873999899876415708999962488899999761999
Q ss_pred HHHHHHHHCCC
Q ss_conf 79999973699
Q gi|254780438|r 206 NIPNLINAIPY 216 (261)
Q Consensus 206 Nl~~~i~~Ip~ 216 (261)
.+-..+...++
T Consensus 229 ~i~~~L~~~g~ 239 (290)
T 2qul_A 229 EIFGALKEIGY 239 (290)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHCC
T ss_conf 99999998499
No 27
>>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} (A:)
Probab=91.65 E-value=0.56 Score=27.76 Aligned_cols=142 Identities=12% Similarity=0.081 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-C-----C---------C
Q ss_conf 85689999985072128971016555333578221333788999998620269638997254-4-----4---------4
Q gi|254780438|r 79 PNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG-N-----G---------N 143 (261)
Q Consensus 79 p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp-d-----~---------~ 143 (261)
+.+++++.+.+.-=+.+-|.+..... .......+..+-+.+.+.|+.++.+--+ + . -
T Consensus 15 ~l~~~~~~~~~~G~~~iEl~~~~~~~--------~~~~~~~~~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~ 86 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTXDKLP--------EYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEF 86 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHH--------HHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEECCCCCCC--------CCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999998298989846677870--------1148306999999999819938999677777899989999999999
Q ss_pred CHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE---CCCCC----HHHHHHHHHHCC-
Q ss_conf 1479999740661465112111024443564336668899987665415623520---78989----877999997369-
Q gi|254780438|r 144 EHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINA---GHDLT----IQNIPNLINAIP- 215 (261)
Q Consensus 144 q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA---GHgLn----~~Nl~~~i~~Ip- 215 (261)
++.++.|+.+|+..|=+|.|.+..-.......+...+.+.+++.+|.+.|+.+.- ++..+ .+....++..++
T Consensus 87 ~~~i~~a~~lg~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~Gv~l~~E~~~~~~~~~~~~~~~~~li~~~~~ 166 (278)
T 1i60_A 87 KGXXETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNR 166 (278)
T ss_dssp HHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 99999999829398999269887777879999999999999999999749989998357775556899999999985116
Q ss_pred -CC-EEEEEHHHHHH
Q ss_conf -96-38842599999
Q gi|254780438|r 216 -YI-SEISVGHAFAA 228 (261)
Q Consensus 216 -~I-~EvsIGHaiIs 228 (261)
.+ -.+-+||+...
T Consensus 167 ~~~g~~~D~~h~~~~ 181 (278)
T 1i60_A 167 DNVGLVLDSFHFHAX 181 (278)
T ss_dssp TTEEEEEEHHHHHHT
T ss_pred CCEEEEECHHHHHHC
T ss_conf 637898541788864
No 28
>>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); 2.30A {Arthrobacter SP} (A:)
Probab=91.34 E-value=1.3 Score=25.22 Aligned_cols=236 Identities=14% Similarity=0.069 Sum_probs=131.0
Q ss_pred CCCCCCCCCHHHHHHHH----CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC-----CCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 98453322144322322----07886899899999999749989998247883-----3488899999887400013674
Q gi|254780438|r 1 MSTSVSVNLNAVAVLRN----RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQ-----RHIRYTDLPEIRRLIDEQFPKA 71 (261)
Q Consensus 1 M~t~LsVNidhiAtLRn----aRg~~~P~~~~~a~~~~~~GadgITvH~R~Dr-----RHI~~~Dv~~l~~~~~~~~~~~ 71 (261)
|+.++++.+.-+.+=-+ ++.....++.++...+.++|.+||-++...-. -=+.+.|+..+++.+... ++
T Consensus 6 m~~~i~~~~~~~~~~g~~~f~~~~~~~~~l~~~l~~~~~~G~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gl 83 (394)
T 1xla_A 6 PADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDT--GL 83 (394)
T ss_dssp GGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH--CC
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CC
T ss_conf 2126417985167789899897768899999999999980999872672234888998889999999999999853--98
Q ss_pred EEE---EEE------------CCC-----------HHHHHHHHHHCCCEEEEEEC-----CCCCCCCCCCCCHHHHHHHH
Q ss_conf 158---883------------485-----------68999998507212897101-----65553335782213337889
Q gi|254780438|r 72 ELN---IEG------------YPN-----------ETFLNLCERYKPEQITLVPD-----DPHQLTSDHGWDFLQNQALL 120 (261)
Q Consensus 72 elN---iEg------------~p~-----------~e~i~ia~~ikP~qvtLVPe-----~r~elTTegGldv~~~~~~L 120 (261)
++. -.. .|+ .+.++++.+..-+.+++-|- .+.+...+..|+. -.+.+
T Consensus 84 ~i~~~~~~~~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~l 161 (394)
T 1xla_A 84 KVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDR--MREGV 161 (394)
T ss_dssp BCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHH--HHHHH
T ss_pred EEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHH--HHHHH
T ss_conf 0223347642254554488669799999999999999999999968982687889886667776699999999--99999
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCC-----------HHHHHHHH-CCCCEE--EECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999986202696389972544441-----------47999974-066146--5112111024443564336668899987
Q gi|254780438|r 121 TKTVARLHNLGSRISLFADGNGNE-----------HSLQAAKL-TGADCI--ELYTGPYGACYNNPQQERIFLNKLAITA 186 (261)
Q Consensus 121 ~~~i~~l~~~girvSLFIDpd~~q-----------~~i~~a~~-~Gad~V--ElhTG~Ya~a~~~~~~~~~el~~i~~aa 186 (261)
..+.....+.|+.+.+-++|-+.. ...+.... .+.+.+ -+=||.+..+ ..... ..+....
T Consensus 162 ~~~~~~a~~~g~~~~~e~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~gv~lD~~H~~~~---g~d~~---~~i~~~~ 235 (394)
T 1xla_A 162 DTAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQMA---GLNFT---HGIAQAL 235 (394)
T ss_dssp HHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTCTTGGGEEECCBHHHHHTT---TCCHH---HHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCC---CCCCH---HHHHHHH
T ss_conf 99999998629884498624666766640543689999999981885215351256763304---57808---9999988
Q ss_pred HHHHHCCCEEEE------------CCC-CCHHHHHHHHHHC-----------C----------CCEEEEEHHHHHHHHHH
Q ss_conf 665415623520------------789-8987799999736-----------9----------96388425999999999
Q gi|254780438|r 187 QLAQKMDLQINA------------GHD-LTIQNIPNLINAI-----------P----------YISEISVGHAFAATALE 232 (261)
Q Consensus 187 ~~A~~lgL~VnA------------GHg-Ln~~Nl~~~i~~I-----------p----------~I~EvsIGHaiIseAl~ 232 (261)
.+.....+.+|- |+| +++.-+...+..+ | .-.+..+++.--.++++
T Consensus 236 ~~~~~~hi~~~d~~~~~~d~~~~~g~g~~~~~~~~~~l~~~~~~~~~~gy~g~~~~E~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T 1xla_A 236 WAEKLFHIDLNGQRGIKYDQDLVFGHGDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSRTDGYDGVWDSAKANMSMY 315 (394)
T ss_dssp HTTCBCCCEECBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHCCTTCCCCCCSCEEECCCCCTTSCHHHHHHHHHHHHHHH
T ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 70953102427888888877867886108899999999945735578788788687635877787016999999999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 40999999999999
Q gi|254780438|r 233 CGVKEAVFCFRRAC 246 (261)
Q Consensus 233 ~GL~~aI~~~~~ii 246 (261)
.+|.+....+.+.-
T Consensus 316 ~~l~~~~~~~~~~~ 329 (394)
T 1xla_A 316 LLLKERALAFRADP 329 (394)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHCH
T ss_conf 99999999976299
No 29
>>3kws_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503} (A:)
Probab=89.96 E-value=1.7 Score=24.41 Aligned_cols=184 Identities=9% Similarity=-0.011 Sum_probs=105.1
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE-EEEECC-------C-----------HHHHH
Q ss_conf 9899999999749989998247883348889999988740001367415-888348-------5-----------68999
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL-NIEGYP-------N-----------ETFLN 85 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el-NiEg~p-------~-----------~e~i~ 85 (261)
++.++...+.+.|.+||-+...+.. +++..+++.+.++ ++++ .+.+.+ . .+.++
T Consensus 39 ~l~~~~~~~~~~G~~~iEl~~~~~~-----~~~~~l~~~l~~~--gl~v~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 111 (287)
T 3kws_A 39 SLNEKLDFXEKLGVVGFEPGGGGLA-----GRVNEIKQALNGR--NIKVSAICAGFKGFILSTDPAIRKECXDTXKEIIA 111 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTTCG-----GGHHHHHHHHTTS--SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEECCCCCH-----HHHHHHHHHHHHH--CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999829999997897445-----4599999999983--99589993388766789699999999999999999
Q ss_pred HHHHHCCCEEEEEECCCCCCC----CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------CCCHHHHHHHHC
Q ss_conf 998507212897101655533----35782213337889999986202696389972544--------441479999740
Q gi|254780438|r 86 LCERYKPEQITLVPDDPHQLT----SDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN--------GNEHSLQAAKLT 153 (261)
Q Consensus 86 ia~~ikP~qvtLVPe~r~elT----TegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd--------~~q~~i~~a~~~ 153 (261)
++.......+.+.|-.....+ ++..|+ ...+.|........+.|+++++--.+. +. ..++...++
T Consensus 112 ~a~~lga~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~a~~~gv~l~~e~~~~~~~~~~~~~~-~~~~~~~~~ 188 (287)
T 3kws_A 112 AAGELGSTGVIIVPAFNGQVPALPHTXETRD--FLCEQFNEXGTFAAQHGTSVIFEPLNRKECFYLRQVA-DAASLCRDI 188 (287)
T ss_dssp HHHHTTCSEEEECSCCTTCCSBCCSSHHHHH--HHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHH-HHHHHHHHH
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCHH-HHHHHHHHH
T ss_conf 9998099847751455577888878899999--9999999999999970987999966776880115789-888889987
Q ss_pred CCCEEEE--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------EEEECC-CCCHHHHHHHHHHCCCCEEEEEH
Q ss_conf 6614651--1211102444356433666889998766541562-------352078-98987799999736996388425
Q gi|254780438|r 154 GADCIEL--YTGPYGACYNNPQQERIFLNKLAITAQLAQKMDL-------QINAGH-DLTIQNIPNLINAIPYISEISVG 223 (261)
Q Consensus 154 Gad~VEl--hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL-------~VnAGH-gLn~~Nl~~~i~~Ip~I~EvsIG 223 (261)
+.+.+-+ -+|.+... .......+.+ ...+....-+ .+.-|. .++|..+-..+.+..+=--+++-
T Consensus 189 ~~~~~gl~~D~~h~~~~---~~~~~~~~~~---~~~~i~~iH~~D~~~~~~~~~G~G~id~~~~~~~L~~~gy~g~~~~E 262 (287)
T 3kws_A 189 NNPGVRCXGDFWHXTWE---ETSDXGAFIS---GGEYLQHVHVASRKRRSXPGEDGDADNYINGFKGLKXIGYNNYVSFE 262 (287)
T ss_dssp CCTTEEEEEEHHHHHHH---CSCHHHHHHH---HGGGEEEEEECCTTTSCSTTTTGGGCCCHHHHHHHHHTTCCSEEEEC
T ss_pred HCCCCCCEECHHHHHHH---HCCHHHHHHH---HCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
T ss_conf 40367601114777786---1340889985---06726699987799998899998752299999999985996289998
Q ss_pred H
Q ss_conf 9
Q gi|254780438|r 224 H 224 (261)
Q Consensus 224 H 224 (261)
+
T Consensus 263 ~ 263 (287)
T 3kws_A 263 C 263 (287)
T ss_dssp C
T ss_pred E
T ss_conf 3
No 30
>>2qw5_A Xylose isomerase-like TIM barrel; YP_324688.1, putative sugar phosphate isomerase/epimerase, structural genomics; 1.78A {Anabaena variabilis atcc 29413} (A:)
Probab=89.68 E-value=1.8 Score=24.26 Aligned_cols=186 Identities=9% Similarity=0.051 Sum_probs=88.0
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCC--CHHHHHHHHHHCCCCEEEEECCC---CCCCCCHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 984533221443223220788689--98999999997499899982478---8334888999998874000136741588
Q gi|254780438|r 1 MSTSVSVNLNAVAVLRNRRNLPWP--NLVHIGKIALQSGASGLTVHPRP---DQRHIRYTDLPEIRRLIDEQFPKAELNI 75 (261)
Q Consensus 1 M~t~LsVNidhiAtLRnaRg~~~P--~~~~~a~~~~~~GadgITvH~R~---DrRHI~~~Dv~~l~~~~~~~~~~~elNi 75 (261)
||.++|++.--.++--. .....| ++.++.+.+.+.|.++|=+.+.. +..-..+.++..+++.+.++ +
T Consensus 7 ~~~kig~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~--g----- 78 (335)
T 2qw5_A 7 ATSDIYISFFXFTTNLQ-PDNLDYRRIVVAHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSE--G----- 78 (335)
T ss_dssp CCCCEEEEGGGTCSCCC-TTCHHHHHHHHHHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHT--T-----
T ss_pred CCCCCCEEEEEEECCCC-CCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC--C-----
T ss_conf 88875268887543777-544542214999999999629698997147787332327888999999999985--9-----
Q ss_pred EECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCC
Q ss_conf 834856899999850721289710165553335782213-3378899999862026963899725444414799997406
Q gi|254780438|r 76 EGYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTG 154 (261)
Q Consensus 76 Eg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~G 154 (261)
++...++..+-.. -+++.. .+...-...+..++. .++.|+.+|
T Consensus 79 --------------l~i~~~~~~~~~~------~~~~~~~~d~~~r~~~~~~~~~----------------~~~~a~~lG 122 (335)
T 2qw5_A 79 --------------LENVKISTNVGAT------RTFDPSSNYPEQRQEALEYLKS----------------RVDITAALG 122 (335)
T ss_dssp --------------CTTCEEEEECCCC------SSSCTTCSSHHHHHHHHHHHHH----------------HHHHHHHTT
T ss_pred --------------CEEEEEEECCCCC------CCCCCCCCCHHHHHHHHHHHHH----------------HHHHHHHHC
T ss_conf --------------9179997257776------5678889899999999999999----------------999988737
Q ss_pred CCEEEECCCCCHHHHHH----------------HHHHHHHHHHHHHHHHHHHHCCCEEEECC--------CCCHHHHHHH
Q ss_conf 61465112111024443----------------56433666889998766541562352078--------9898779999
Q gi|254780438|r 155 ADCIELYTGPYGACYNN----------------PQQERIFLNKLAITAQLAQKMDLQINAGH--------DLTIQNIPNL 210 (261)
Q Consensus 155 ad~VElhTG~Ya~a~~~----------------~~~~~~el~~i~~aa~~A~~lgL~VnAGH--------gLn~~Nl~~~ 210 (261)
+..+-+|+|.+...+.. .+......+.+.+.+.+|.+.|+.+---. .-+.+.+..+
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gi~l~~E~~~~~~~~~~~~~~~~~~l 202 (335)
T 2qw5_A 123 GEIXXGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLAIEPITHWETPGPNKLSQLIEF 202 (335)
T ss_dssp CSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEECCCCTTTCSSCCSHHHHHHH
T ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 66452134547675777766654443221004999999999999999999875677677503532045554347889999
Q ss_pred HHHCC--CCE-EEEEHHHHHHHH
Q ss_conf 97369--963-884259999999
Q gi|254780438|r 211 INAIP--YIS-EISVGHAFAATA 230 (261)
Q Consensus 211 i~~Ip--~I~-EvsIGHaiIseA 230 (261)
++.++ .+. .+.+||+....-
T Consensus 203 ~~~v~~~~~~i~~D~~h~~~~~~ 225 (335)
T 2qw5_A 203 LKGVKSKQVGVVIDSAHEILDGE 225 (335)
T ss_dssp HTTCCCTTEEEEEEHHHHHHHCC
T ss_pred HHHCCCCCCEEEECHHHHHHCCC
T ss_conf 88506987549970688887389
No 31
>>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* (A:1-110,A:153-365)
Probab=89.58 E-value=0.91 Score=26.32 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=87.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC------CCEEEEE------ECCCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 655533357822133378899999862026------9638997------2544441479999740661465112111024
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNL------GSRISLF------ADGNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~------girvSLF------IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
..+..|-+.|=.+..+..++.+++..+++. ++|+|.. .+++....-++.+.+.|+|.|.+|.+.+...
T Consensus 153 ~~n~r~d~yGgsl~~r~r~~~eii~avr~~v~~~~v~vris~~~~~~~~~~~~e~~~~~~~l~~~g~d~i~v~~~~~~~~ 232 (323)
T 2gou_A 153 EANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW 232 (323)
T ss_dssp GGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 64777654564055667899999888886438866540521412347976553056778999876415840785235564
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 4435643366688999876654156235207898987799999736996388425999999999
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
+..+.... .+.++ ..+....+-.|-| --+.+....+++. ...+=|.||-+++++--+
T Consensus 233 ~~~~~~~~-~~~~i----~~~~~~pvi~nG~-i~s~~~a~~~l~~-g~~D~V~igR~~l~nP~l 289 (323)
T 2gou_A 233 DDAPDTPV-SFKRA----LREAYQGVLIYAG-RYNAEKAEQAIND-GLADMIGFGRPFIANPDL 289 (323)
T ss_dssp TBCCCCCH-HHHHH----HHHHCCSEEEEES-SCCHHHHHHHHHT-TSCSEEECCHHHHHCTTH
T ss_pred CCCCCCCH-HHHHH----HHHHCCCCEEEEC-CCCHHHHHHHHHC-CCCCHHHHHHHHHHCCCH
T ss_conf 44778637-89999----9985488089988-9699999999987-997668989999989239
No 32
>>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A* (A:)
Probab=89.45 E-value=1 Score=25.91 Aligned_cols=132 Identities=11% Similarity=0.051 Sum_probs=70.1
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE---CCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 8999999997499899982478833488899999887400013674158883---4856899999850721289710165
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG---YPNETFLNLCERYKPEQITLVPDDP 102 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg---~p~~e~i~ia~~ikP~qvtLVPe~r 102 (261)
+++.+....+.|+..+...-=+.--+ .+..+..+...+.. ..+.+.. ..++++++...+..-+.+.+=.|.-
T Consensus 89 i~~~i~~~~~~g~~~~~~~~g~p~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~g~~~v~i~les~ 163 (348)
T 3iix_A 89 IVERARLAVQFGAKTIVLQSGEDPYX-MPDVISDIVKEIKK----MGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETA 163 (348)
T ss_dssp HHHHHHHHHHTTCSEEEEEESCCGGG-TTHHHHHHHHHHHT----TSCEEEEECCCCCHHHHHHHHHHTCCEEECCCBCS
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCC-CHHHHHHHHHHHHC----CCHHCCCCCCCHHHHHHHHHHHHHCEEEEECCCCC
T ss_conf 99999999971882565402652345-27888899886401----20100234441168999999874262788444423
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC---CCCC----CHHHHHHHHCCCCEEEECCC
Q ss_conf 5533357822133378899999862026963899725---4444----14799997406614651121
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD---GNGN----EHSLQAAKLTGADCIELYTG 163 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID---pd~~----q~~i~~a~~~Gad~VElhTG 163 (261)
++-+-.- ..-....+.....++.+++.|+.+++.+= |.-+ +..++.++++|++.+-++.=
T Consensus 164 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~g~~~~~~~i~g~p~e~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (348)
T 3iix_A 164 NPVLHRK-LRPDTSFENRLNXLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPF 230 (348)
T ss_dssp CHHHHHH-HSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEEC
T ss_pred CHHHHHC-CCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCEECCCEE
T ss_conf 3455210-000332015677777878765312410576277656688888899998755334055101
No 33
>>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer, alpha-beta barrel; 2.50A {Thermoanaerobacter thermosulfurogenes} (A:)
Probab=88.64 E-value=2.1 Score=23.77 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=123.8
Q ss_pred CHHHHHHHHHHCCCCEEEEECCC---------CCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC---------------C-
Q ss_conf 98999999997499899982478---------8334888999998874000136741588834---------------8-
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRP---------DQRHIRYTDLPEIRRLIDEQFPKAELNIEGY---------------P- 79 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~---------DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~---------------p- 79 (261)
++-++...+.+.|.+||-+|.-. ++..+.++++..+++.+... ++++..=.. |
T Consensus 81 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gl~i~~~~~~~~~~~~~~~~~~~~~d 158 (438)
T 1a0c_A 81 RVEAAFEFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTS--KTKVLWGTANLFSNPRFVHGASTSCN 158 (438)
T ss_dssp HHHHHHHHHHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTC--SCEEEEEECCCSSSGGGTTCSTTCSC
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCEEEECCCCEECCCEECCCCCCCC
T ss_conf 9999999998718845760343348887747888999999999999988742--97000112662321100047666969
Q ss_pred ----------CHHHHHHHHHHCCCEEEEEE-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-
Q ss_conf ----------56899999850721289710-----16555333578221333788999998620269638997254444-
Q gi|254780438|r 80 ----------NETFLNLCERYKPEQITLVP-----DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN- 143 (261)
Q Consensus 80 ----------~~e~i~ia~~ikP~qvtLVP-----e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~- 143 (261)
....++++.....+.+++-| +.+.+.+.+.+|+.. .+.|..+.....+.|+++.+.+++-+-
T Consensus 159 ~~~r~~~~~~~~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~l~~i~~~a~~~g~~~~i~~e~~~~~ 236 (438)
T 1a0c_A 159 ADVFAYSAAQVKKALEITKELGGENYVFWGGREGYETLLNTDMEFELDNF--ARFLHMAVDYAKEIGFEGQFLIEPKPKE 236 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSEESCGGGCCHHHHHHHH--HHHHHHHHHHHHHTTCCSEEEECCCSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHH--HHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 89999999999999999998299889977887655676658999999999--9999999998774387705987248998
Q ss_pred ----------CHHHHHHHHC-CCC--EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH--H--------HHCCCEEEECC
Q ss_conf ----------1479999740-661--46511211102444356433666889998766--5--------41562352078
Q gi|254780438|r 144 ----------EHSLQAAKLT-GAD--CIELYTGPYGACYNNPQQERIFLNKLAITAQL--A--------QKMDLQINAGH 200 (261)
Q Consensus 144 ----------q~~i~~a~~~-Gad--~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~--A--------~~lgL~VnAGH 200 (261)
........+. +.+ .+.|=||.+..+-.++. ..+..+....+. . ......+..|+
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~~gl~lD~gH~~~~g~d~~---~~~~~l~~~~ri~~vHl~D~~~~~~~~~~~~~g~ 313 (438)
T 1a0c_A 237 PTKHQYDFDVANVLAFLRKYDLDKYFKVNIEANHATLAFHDFQ---HELRYARINGVLGSIDANTGDMLLGWDTDQFPTD 313 (438)
T ss_dssp SSSEESSCSHHHHHHHHHHTTCTTTEEEEEEHHHHHHTTCCHH---HHHHHHHHTTCEEEEECCBCCTTSBSCCCBCCCC
T ss_pred CCCCEECCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCHH---HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 7654654878999999998388043533332340112789979---9999999779968786589886778887838885
Q ss_pred -CCCHHHHHHHHHHCCCCE----E-------------EEEHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -989877999997369963----8-------------842599999999940999999999999
Q gi|254780438|r 201 -DLTIQNIPNLINAIPYIS----E-------------ISVGHAFAATALECGVKEAVFCFRRAC 246 (261)
Q Consensus 201 -gLn~~Nl~~~i~~Ip~I~----E-------------vsIGHaiIseAl~~GL~~aI~~~~~ii 246 (261)
.+++..+...+....+-. | ...++.-..++..-++..++...++.-
T Consensus 314 G~id~~~~~~~l~~~gy~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 377 (438)
T 1a0c_A 314 IRMTTLAMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDRV 377 (438)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCEEECCCCCTTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2999999999999569787776666776756676577888766349999999999999973126
No 34
>>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* (B:)
Probab=88.51 E-value=2.2 Score=23.72 Aligned_cols=163 Identities=12% Similarity=0.057 Sum_probs=95.6
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 89999999974998999824788334888999998874000136741588834856899999850721289710165553
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQL 105 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~el 105 (261)
-+.+|+.|.++|.|||-+|--.. +.|.+++.. .-+..
T Consensus 173 f~~AA~~A~~AGfDgVEIh~ahG---------yLl~QFlSp----------------------------------~~N~R 209 (402)
T 2hsa_B 173 YRRSALNAIEAGFDGIEIHGAHG---------YLIDQFLKD----------------------------------GINDR 209 (402)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTT---------SHHHHHHCT----------------------------------TTCCC
T ss_pred HHHHHHHHHHCCCCEEECCCCCC---------HHHHHHHHH----------------------------------HCCCC
T ss_conf 99999999854952788200311---------068888775----------------------------------44456
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCC--CEEEEEECC----------C-------CC--CHHHHHHHHCCCCEEEECCCC
Q ss_conf 33578221333788999998620269--638997254----------4-------44--147999974066146511211
Q gi|254780438|r 106 TSDHGWDFLQNQALLTKTVARLHNLG--SRISLFADG----------N-------GN--EHSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 106 TTegGldv~~~~~~L~~~i~~l~~~g--irvSLFIDp----------d-------~~--q~~i~~a~~~Gad~VElhTG~ 164 (261)
|-|-|=++.....++.++++.+++.- ..+..-+.+ + ++ ..-++...+.|+|.+++=.|.
T Consensus 210 tDeYGGs~eNR~Rf~~Eiv~aIR~~vg~~~i~~~~~~~~~~~~~~~~~~~~~G~~~ee~~~~~~~l~~~GvD~i~vs~G~ 289 (402)
T 2hsa_B 210 TDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPR 289 (402)
T ss_dssp CSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 64333100143124689987544244057622055124313456656417888889999878887403665418852565
Q ss_pred CHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 102444-35643366688999876654156235207898987799999736996388425999999999
Q gi|254780438|r 165 YGACYN-NPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 165 Ya~a~~-~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
|..... .+......--....+........+-|-+|-+.+.+.....++ -...+=|.+|-.++++-=+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~g~~~~~~a~~~l~-~g~~D~v~~gR~~iadPd~ 357 (402)
T 2hsa_B 290 YVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVA-QGDADLVSYGRLFISNPDL 357 (402)
T ss_dssp CCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHHHHHHHHH-TTSCSEEEESHHHHHCTTH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH-CCCCCEEEHHHHHHHCCCH
T ss_conf 5555665566467621127999999985489889858989899999998-6996273132998869209
No 35
>>3cny_A Inositol catabolism protein IOLE; NP_786806.1, xylose isomerase-like TIM barrel, structural genomics; 1.85A {Lactobacillus plantarum WCFS1} (A:)
Probab=88.41 E-value=1.1 Score=25.90 Aligned_cols=233 Identities=11% Similarity=-0.055 Sum_probs=118.7
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE---EEEECC
Q ss_conf 45332214432232207886899899999999749989998247883348889999988740001367415---888348
Q gi|254780438|r 3 TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL---NIEGYP 79 (261)
Q Consensus 3 t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el---NiEg~p 79 (261)
.++|++.--+..-...-....-++.+....+.++|.+||-+.+-+. +...+++.+... ++++ +.-+.+
T Consensus 10 ~kig~~~~~~~~~~~~~~~~~~~l~e~~~~~~~~G~~~iEl~~~~~-------~~~~~~~~l~~~--gl~i~~~~~~~~~ 80 (301)
T 3cny_A 10 IKWGIAPIGWRNDDIPSIGKDNNLQQLLSDIVVAGFQGTEVGGFFP-------GPEKLNYELKLR--NLEIAGQWFSSYI 80 (301)
T ss_dssp EEEEECGGGTCCSSSTTTTTTCCHHHHHHHHHHHTCCEECCCTTCC-------CHHHHHHHHHHT--TCEECEEEEEECH
T ss_pred CEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCC-------CHHHHHHHHHHH--CCEEEEECCCCCC
T ss_conf 1389711467767552024899999999999985989999899789-------989999999980--9900140246654
Q ss_pred C-----------HHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-------CH----HHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 5-----------6899999850721289710165553335782-------21----333788999998620269638997
Q gi|254780438|r 80 N-----------ETFLNLCERYKPEQITLVPDDPHQLTSDHGW-------DF----LQNQALLTKTVARLHNLGSRISLF 137 (261)
Q Consensus 80 ~-----------~e~i~ia~~ikP~qvtLVPe~r~elTTegGl-------dv----~~~~~~L~~~i~~l~~~girvSLF 137 (261)
. .+.++++.......+..-|-.+..-.+.... +. ..-.+.+.++....++.|+++.+=
T Consensus 81 ~~~~~~~~~~~~~~~i~~a~~lg~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gv~l~~E 160 (301)
T 3cny_A 81 IRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYH 160 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 32002457788888999999840363555402444202556776677888889999999999999999998659715885
Q ss_pred ECC-----CCCCHHHHHHHHCCCCEEEE--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Q ss_conf 254-----44414799997406614651--12111024443564336668899987665---------------------
Q gi|254780438|r 138 ADG-----NGNEHSLQAAKLTGADCIEL--YTGPYGACYNNPQQERIFLNKLAITAQLA--------------------- 189 (261)
Q Consensus 138 IDp-----d~~q~~i~~a~~~Gad~VEl--hTG~Ya~a~~~~~~~~~el~~i~~aa~~A--------------------- 189 (261)
-.+ .+. ......+.++.+.|-+ =+|.....-.+ ....+.++..-..+.
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~~~gl~~D~~H~~~~~~d---~~~~~~~~~~~i~~vHi~d~~~~~~~~~~~~~~~~~ 236 (301)
T 3cny_A 161 HHXGTGIQTKE-ETDRLXANTDPKLVGLLYDTGHIAVSDGD---YXALLNAHIDRVVHVHFKDVRRSKEEECRAKGLTFQ 236 (301)
T ss_dssp CCTTSSSCSHH-HHHHHHHTSCTTTCEEEEEHHHHHHHHSC---SHHHHHHHGGGEEEEEECEECHHHHHHHHHHTCCHH
T ss_pred CCCCEECCCCC-HHHHHHHHCCCCEEEEEEEHHHHHHHHCC---HHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
T ss_conf 25550002342-15677651475258788850677764044---589998705633332011255543332113455442
Q ss_pred --HHCCCEEEECCC-CCHHHHHHHHHHCCCCEEEEEHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --415623520789-898779999973699638842599--99999994099999999999974
Q gi|254780438|r 190 --QKMDLQINAGHD-LTIQNIPNLINAIPYISEISVGHA--FAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 190 --~~lgL~VnAGHg-Ln~~Nl~~~i~~Ip~I~EvsIGHa--iIseAl~~GL~~aI~~~~~ii~~ 248 (261)
......+.-|+| +++.-+-..+.+..+=--++|=+. ...+--+-++.+++.-+++++.+
T Consensus 237 ~~~~~~~~~~~g~G~id~~~i~~~L~~~gy~g~~~iE~~~~~~~~d~~~~~~~~~~~l~~~l~~ 300 (301)
T 3cny_A 237 GSFLNGXFTVPGDGDLDFKPVYDKLIANNYKGWIVVEAEQDPSKANPLEXAQIAHRYIKQHLIE 300 (301)
T ss_dssp HHHHTTCEECTTTSSCCCHHHHHHHHHTTCCEEEEECCCCCTTTSCHHHHHHHHHHHHHHHTCC
T ss_pred CHHCCCCEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 0102872245998965999999999985998799999863787899999999999999998715
No 36
>>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomics, NPPSFA; 2.30A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=88.23 E-value=2 Score=23.94 Aligned_cols=60 Identities=18% Similarity=0.061 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCC--C-------CCCCHHHHHHHHHHHCCCCCCCEEEEEECCC-HHHHHHHHH
Q ss_conf 989999999974998999824788--3-------3488899999887400013674158883485-689999985
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPD--Q-------RHIRYTDLPEIRRLIDEQFPKAELNIEGYPN-ETFLNLCER 89 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~D--r-------RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~-~e~i~ia~~ 89 (261)
..+++|+.+.++||+.||||.|-- + +.+.++-+..+++.+ ++++..-|+.+ .+...-+++
T Consensus 25 ~t~~~a~~~~~aG~~~l~vhgRt~~~~~~~~~~~g~~~~e~I~~v~~~~-----~ipvi~NG~i~~~~d~~~~~~ 94 (330)
T 2yzr_A 25 TNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAV-----SIPVMAKCRIGHTTEALVLEA 94 (330)
T ss_dssp SSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHC-----SSCEEEEEETTCHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHC-----CCCCEECCCCCCHHHHHHHHH
T ss_conf 7899999988617537875435778787447921048889999999743-----765110144541798999987
No 37
>>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} (A:)
Probab=88.07 E-value=0.93 Score=26.27 Aligned_cols=197 Identities=15% Similarity=0.088 Sum_probs=116.1
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCHH--HHHHHHHHHCCCCCCCEEEEEECCCH--------H------HHHHHHHH
Q ss_conf 99999999749989998247883348889--99998874000136741588834856--------8------99999850
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPDQRHIRYT--DLPEIRRLIDEQFPKAELNIEGYPNE--------T------FLNLCERY 90 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~DrRHI~~~--Dv~~l~~~~~~~~~~~elNiEg~p~~--------e------~i~ia~~i 90 (261)
++-|..|+++|||-|-+--.-..-=.+++ -+..+++.+ ++|+++=.-|.. | -+..+.+.
T Consensus 11 ~~~a~~A~~~GAdRiELcs~L~~GGlTPS~g~i~~~~~~~-----~ipv~vMIRPR~gdF~Ys~~E~~~M~~di~~~~~~ 85 (256)
T 1twd_A 11 XECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRV-----TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVREL 85 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHC-----CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-----CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9999999984999899847866699798999999999864-----99727998337998878989999999999999985
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC--CCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 7212897101655533357822133378899999862026963899725--44441479999740661465112111024
Q gi|254780438|r 91 KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD--GNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 91 kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID--pd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
.-+-+.+ .-||.||-+|.. .++..++..+...+----=+| +|+.+ .++...++|+++|=-.-|+= .+
T Consensus 86 GadGvVf-----G~L~~dg~iD~~----~~~~Li~~a~~~~vTFHRAfD~~~d~~~-al~~L~~lG~~rVLTSGg~~-~a 154 (256)
T 1twd_A 86 GFPGLVT-----GVLDVDGNVDXP----RXEKIXAAAGPLAVTFHRAFDXCANPLY-TLNNLAELGIARVLTSGQKS-DA 154 (256)
T ss_dssp TCSEEEE-----CCBCTTSSBCHH----HHHHHHHHHTTSEEEECGGGGGCSCHHH-HHHHHHHHTCCEEEECTTSS-ST
T ss_pred CCCEEEE-----EEECCCCCCCHH----HHHHHHHHHCCCCEEEEEHHHHCCCHHH-HHHHHHHCCCCEEECCCCCC-CH
T ss_conf 9981378-----678888885499----9999999864467366112354088999-99999866978686268988-55
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHH--------HHHHHHHH-----
Q ss_conf 44356433666889998766541562352078989877999997369963884259999--------99999409-----
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFA--------ATALECGV----- 235 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiI--------seAl~~GL----- 235 (261)
... ++.+++..++ .-|..+=+|=|+|.+|++.++. -.+.|++.+-.-. ...+.+|.
T Consensus 155 ~~g-------~~~L~~L~~~--a~~~iii~GgGv~~~nv~~l~~--tg~~~~H~s~~~~~~~~~~~~~~~v~mg~~~~~~ 223 (256)
T 1twd_A 155 LQG-------LSKIXELIAH--RDAPIIXAGAGVRAENLHHFLD--AGVLEVHSSAGAWQASPXRYRNQGLSMSSDEHAD 223 (256)
T ss_dssp TTT-------HHHHHHHHTS--SSCCEEEEESSCCTTTHHHHHH--HTCSEEEECCEEEECCCCCCCC------------
T ss_pred HHH-------HHHHHHHHHH--CCCCEEEEECCCCHHHHHHHHH--CCCCEEEECCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 667-------9999999983--5995899626789899999997--7998899788865678554457776347887887
Q ss_pred --------HHHHHHHHHHHHHHH
Q ss_conf --------999999999997410
Q gi|254780438|r 236 --------KEAVFCFRRACGQHL 250 (261)
Q Consensus 236 --------~~aI~~~~~ii~~~~ 250 (261)
.+.|+++++++++..
T Consensus 224 e~~~~~td~~~Vr~~~~~l~~~~ 246 (256)
T 1twd_A 224 EYSRYIVDGAAVAEXKGIIERHQ 246 (256)
T ss_dssp -CCEEEECHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 66416128999999999999976
No 38
>>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* (A:1-50,A:84-250)
Probab=88.05 E-value=0.39 Score=28.87 Aligned_cols=57 Identities=12% Similarity=0.060 Sum_probs=38.1
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEE--EEECCCCCCCC------CHHHHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 078868998999999997499899--98247883348------889999988740001367415888348
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGL--TVHPRPDQRHI------RYTDLPEIRRLIDEQFPKAELNIEGYP 79 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgI--TvH~R~DrRHI------~~~Dv~~l~~~~~~~~~~~elNiEg~p 79 (261)
+.|..-.|-+.+-..|.+.|||.| .|++-.|.--+ +-+|+.++.+ . .++.+|+|.-.
T Consensus 11 ~~~~~~e~t~~~~~~~~~~~~~~~e~d~~~~~d~~~~~~hDIpTL~e~l~~~~---~--~~v~l~iEiK~ 75 (217)
T 3ks6_A 11 GTLEFGDSTPHGFTATAAXALEEVEFDLHPTADGAIVVHHHPXTLEELCALYV---D--SHVNFRCEIKP 75 (217)
T ss_dssp THHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSCCEEHHHHHHHHT---T--CSCEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCHHHHHHHHH---C--CCCCCEEEECC
T ss_conf 99999853499999999859898998789902996899747898999999975---1--58763141036
No 39
>>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} (A:1-213)
Probab=88.02 E-value=1.3 Score=25.26 Aligned_cols=182 Identities=14% Similarity=0.005 Sum_probs=119.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 78868998999999997499899982478833488899999887400013674158883485689999985072128971
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLV 98 (261)
......++.+.|+.+.++|+++|.+.........+..+...+...... ..+..-+-+.++.+++........+.+++.
T Consensus 31 ~~~~~~~~~~~a~~~~~aGa~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~d~i~~~ 108 (213)
T 3igs_A 31 PLDKPEIVAAXALAAEQAGAVAVRIEGIDNLRXTRSLVSVPIIGIIKR--DLDESPVRITPFLDDVDALAQAGAAIIAVD 108 (213)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEEESHHHHHHHHTTCCSCEEEECBC--CCSSCCCCBSCSHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCEEEEEEC--CCCCCEEEECCHHHHHHHHHHCCCCEEEEE
T ss_conf 777819999999999858986774389999999987437850012202--566775773307998888997799999987
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
....... ......+.+....++.+..=+.. ++ ..+.+.+.|+|.|=++.+.+......+
T Consensus 109 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~v~~-~~--~a~~~~~~Gad~i~v~~~~~~g~~~~~------ 167 (213)
T 3igs_A 109 GTARQRP------------VAVEALLARIHHHHLLTXADCSS-VD--DGLACQRLGADIIGTTXSGYTTPDTPE------ 167 (213)
T ss_dssp CCSSCCS------------SCHHHHHHHHHHTTCEEEEECCS-HH--HHHHHHHTTCSEEECTTTTSSSSSCCS------
T ss_pred CCCCCCH------------HHHHHHHHHHHHCCCEEEECCCC-HH--HHHHHHHCCCCEEEEECCCCCCCCCCC------
T ss_conf 2326788------------89999999999709855012588-89--999999749974365324656666671------
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 688999876654156235207898-987799999736996388425999
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
..+....+.+...++-|=|.=|. +-+++..+++ -+.+=|-+|-+|
T Consensus 168 -~~~~~l~~~~~~~~ipvia~GGI~t~~d~~~~l~--~GAd~V~vGsai 213 (213)
T 3igs_A 168 -EPDLPLVKALHDAGCRVIAEGRYNSPALAAEAIR--YGAWAVTVGSAI 213 (213)
T ss_dssp -SCCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHH--TTCSEEEECHHH
T ss_pred -HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH--CCCCEEEECHHH
T ss_conf -3579999987256881998689899999999998--699999987687
No 40
>>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, structural genomics, joint center for structural genomics, JCSG; 1.91A {Haemophilus somnus 129PT} (A:)
Probab=87.76 E-value=2.4 Score=23.40 Aligned_cols=203 Identities=12% Similarity=0.047 Sum_probs=129.0
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998-----24788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV-----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv-----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++-++.+.++.++++|++.+-+ |-=+. =-.-.+-|..|++.+ .+...+=.....++++...+..++++|
T Consensus 24 d~~~~~~~i~~~~~~g~~~ihvDimD~~f~~~-~~~G~~~i~~i~~~~-----pi~~hL~~~d~~~~i~~~~~aGad~it 97 (237)
T 3cu2_A 24 NWLQLNEEVTTLLENQINVLHFDIADGQFSSL-FTVGAIGIKYFPTHC-----FKDVHLXVRNQLEVAKAVVANGANLVT 97 (237)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSC-BCBCTHHHHTSCTTS-----EEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-CCCCHHHHHHHHCCC-----CCCEEEEEECCCCHHHHHCCCCCEEEE
T ss_conf 99999999999997799979997868954767-575989999753047-----875158973353111222036762899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHH--HHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 710165553335782213337889999--986202696389972544441479999740661465112111024443564
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKT--VARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~--i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
+-.|.... .....+.+++. +...+..++++.|-+.|+.....+ .-...++|.|=++|-..... ....
T Consensus 98 vh~ea~~~--------~~~~l~~I~~~~~~~~~~~~~i~~gl~~~p~t~~~~~-~~~~~~vd~vlimsv~pG~~--gq~~ 166 (237)
T 3cu2_A 98 LQLEQYHD--------FALTIEWLAKQKTTYANQVYPVLIGACLCPETPISEL-EPYLDQIDVIQLLTLDPRNG--TKYP 166 (237)
T ss_dssp EETTCTTS--------HHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGG-TTTTTTCSEEEEESEETTTT--EECC
T ss_pred EECCCCCC--------HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHH-HHHHHHHHHEEEEECCCCCC--CCCC
T ss_conf 96466666--------8999998776656667654034665265056769999-99885530014751367423--4322
Q ss_pred HHHHHHHHHHHHHHHHHC--CCEEEECCCCCHHHHHHHHHHCC-CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 336668899987665415--62352078989877999997369-9638842599999999940999999999999
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKM--DLQINAGHDLTIQNIPNLINAIP-YISEISVGHAFAATALECGVKEAVFCFRRAC 246 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~l--gL~VnAGHgLn~~Nl~~~i~~Ip-~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii 246 (261)
...-+++++...++.... +..+-+.=|+|.+|+..++. .. ..+=+-+|-+|... -..++++++++.|
T Consensus 167 ~~~~~~ki~~~~~~~~~~~~~~~I~vdGGi~~~ti~~~~~-aGa~vD~iVvGsaIf~~----~~~~~~~~~~~~i 236 (237)
T 3cu2_A 167 SELILDRVIQVEKRLGNRRVEKLINIDGSXTLELAKYFKQ-GTHQIDWLVSGSALFSG----ELKTNLKVWKSSI 236 (237)
T ss_dssp HHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHH-SSSCCCCEEECGGGGSS----CHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH-CCCCCCEEEECCCEECC----CHHHHHHHHHHHH
T ss_conf 1003678888888755459986899979928888999997-23899989968521496----8899999999952
No 41
>>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A* (A:)
Probab=86.92 E-value=2.7 Score=23.09 Aligned_cols=195 Identities=10% Similarity=0.001 Sum_probs=116.1
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC-------------------
Q ss_conf 7886899899999999749989998247883348889999988740001367415888348-------------------
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP------------------- 79 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p------------------- 79 (261)
++....++.+....+.+.|.+||-+...+ -++..+.++..+++.+.+. ++++..=..+
T Consensus 31 ~~~~~~~l~e~~~~~~~~G~~~iEl~~~~-~~~~~~~~~~~~~~~~~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (309)
T 2hk0_A 31 EHEWSAKFGPYIEKVAKLGFDIIEVAAHH-INEYSDAELATIRKSAKDN--GIILTAGIGPSKTKNLSSEDAAVRAAGKA 107 (309)
T ss_dssp CSCTTSCSHHHHHHHHHTTCSEEEEEHHH-HTTSCHHHHHHHHHHHHHT--TCEEEEECCCCSSSCSSCSCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCCCCHHHHHHHHHHHHHH--CCEEEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf 68778799999999998099989966777-6658999999999999981--99799974476666567989999999999
Q ss_pred -CHHHHHHHHHHCCCEEEEEECCC------CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------CCC
Q ss_conf -56899999850721289710165------553335782213337889999986202696389972544--------441
Q gi|254780438|r 80 -NETFLNLCERYKPEQITLVPDDP------HQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN--------GNE 144 (261)
Q Consensus 80 -~~e~i~ia~~ikP~qvtLVPe~r------~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd--------~~q 144 (261)
..+.++++...-...+.+.|-.. .+.+++..|+- -.+.|..+.+...+.|+++.+=-.+. ++
T Consensus 108 ~~~~~i~~a~~lg~~~v~~~~g~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~- 184 (309)
T 2hk0_A 108 FFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYAR--GVEGINGIADFANDLGINLCIEVLNRFENHVLNTAA- 184 (309)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHH--HHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHH-
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH-
T ss_conf 99999999998389989854523668767888789999999--999999999877640443002567765555669899-
Q ss_pred HHHHHHHHCCCC--EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEECCC-CCHHHHHHHHHHCCCCEEE
Q ss_conf 479999740661--46511211102444356433666889998766541562-3520789-8987799999736996388
Q gi|254780438|r 145 HSLQAAKLTGAD--CIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDL-QINAGHD-LTIQNIPNLINAIPYISEI 220 (261)
Q Consensus 145 ~~i~~a~~~Gad--~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL-~VnAGHg-Ln~~Nl~~~i~~Ip~I~Ev 220 (261)
........++.+ .+-+-||.++....+.. ..++++..-..+.|-... .+--|.| +++..+-..+.+..+=--+
T Consensus 185 ~~~~l~~~~~~~~~~~~~D~~h~~~~~~~~~---~~i~~~~~~i~~vHikD~~~~~~G~G~~d~~~~l~~L~~~gy~g~i 261 (309)
T 2hk0_A 185 EGVAFVKDVGKNNVKVXLDTFHXNIEEDSFG---DAIRTAGPLLGHFHTGESNRRVPGKGRXPWHEIGLALRDINYTGAV 261 (309)
T ss_dssp HHHHHHHHHTCTTEEEEEEHHHHHHHCSCHH---HHHHHHGGGEEEEEECCTTSCCTTSSCCCHHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHCCCCHH---HHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 9988888624875321244057887499999---9998721838899984798999999764999999999985998169
Q ss_pred EE
Q ss_conf 42
Q gi|254780438|r 221 SV 222 (261)
Q Consensus 221 sI 222 (261)
++
T Consensus 262 ~~ 263 (309)
T 2hk0_A 262 IX 263 (309)
T ss_dssp EE
T ss_pred EE
T ss_conf 99
No 42
>>2g0w_A LMO2234 protein; 16411704, structural genomics, PSI, protein structure initiative, joint center for structural genomics, JCSG; HET: MSE PG4; 1.70A {Listeria monocytogenes} (A:)
Probab=86.68 E-value=2.8 Score=23.00 Aligned_cols=212 Identities=13% Similarity=0.119 Sum_probs=133.3
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCC-CCCHHHHHHHHHHHCCCCCCCEEEEEECC----------------CHHHHHHH
Q ss_conf 98999999997499899982478833-48889999988740001367415888348----------------56899999
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQR-HIRYTDLPEIRRLIDEQFPKAELNIEGYP----------------NETFLNLC 87 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrR-HI~~~Dv~~l~~~~~~~~~~~elNiEg~p----------------~~e~i~ia 87 (261)
++.+....+.++|.+||-+.+....+ ...+.++..+++.+... ++++--=..+ ..+.++++
T Consensus 37 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 114 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDXLRILDEH--NXKVTEVEYITQWGTAEDRTAEQQKKEQTTFHXA 114 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHT--TCEEEEEECBCCCSSTTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHC--CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999699989976544300054689999999999963--9979998862133688268999999999999999
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---CCCCHHHHHHHHCCCCEEEE--CC
Q ss_conf 85072128971016555333578221333788999998620269638997254---44414799997406614651--12
Q gi|254780438|r 88 ERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG---NGNEHSLQAAKLTGADCIEL--YT 162 (261)
Q Consensus 88 ~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp---d~~q~~i~~a~~~Gad~VEl--hT 162 (261)
.......+..-|-..++ |+ .-.+.|+.+....++.||++.+--.+ ++++ ..+....++.+.+-+ =|
T Consensus 115 ~~lG~~~i~~~~~~~~~------~~--~~~~~l~~~~~~a~~~gi~l~~e~~~~~~~~~~-~~~l~~~~~~~~~gi~~D~ 185 (296)
T 2g0w_A 115 RLFGVKHINCGLLEKIP------EE--QIIVALGELCDRAEELIIGLEFXPYSGVADLQA-AWRVAEACGRDNAQLICDT 185 (296)
T ss_dssp HHHTCCEEEECCCSCCC------HH--HHHHHHHHHHHHHTTSEEEEECCTTSSSCSHHH-HHHHHHHHTCTTEEEEEEH
T ss_pred HHCCCCEEEECCCCCHH------HH--HHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH-HHHHHHHHHCCEEEEECCC
T ss_conf 97399878737987324------65--899999999998864686886514777899999-9999997405326884140
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------EEEECC-CCCHHHHHHHHHHCCC---C-EE
Q ss_conf 11102444356433666889998766541562------------------352078-9898779999973699---6-38
Q gi|254780438|r 163 GPYGACYNNPQQERIFLNKLAITAQLAQKMDL------------------QINAGH-DLTIQNIPNLINAIPY---I-SE 219 (261)
Q Consensus 163 G~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL------------------~VnAGH-gLn~~Nl~~~i~~Ip~---I-~E 219 (261)
|++...-.++.+ .++++ ..+....-+ .+.-|- .+++..+-..+.+..+ + .+
T Consensus 186 ~h~~~~g~~~~~---~l~~~---~~~i~~~Hikd~~~~~~~~~~~~~~~~~~~~g~G~id~~~il~~l~~~gy~G~~~~~ 259 (296)
T 2g0w_A 186 WHWARANQTAES---IKNVP---ADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVXGV 259 (296)
T ss_dssp HHHHHTTCCGGG---GTTCC---GGGEEEEEECBCCSSCCSSHHHHHHHBCBCTTSSSSCHHHHHHHHHHHTCCCSCEEE
T ss_pred HHHHHCCCCHHH---HHHHH---CCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 788863999999---99850---400799999854676532011124566448989761899999999984999887999
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8425999999999409999999999997410565
Q gi|254780438|r 220 ISVGHAFAATALECGVKEAVFCFRRACGQHLDNT 253 (261)
Q Consensus 220 vsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~~ 253 (261)
-.-......+..+..+..++..+++++++..+..
T Consensus 260 e~~~~~~~~~~~~~~~~~~~~~l~~~l~~a~~~~ 293 (296)
T 2g0w_A 260 EVISDSXVATGLEYAALKVYNATKKVLDEAWPEI 293 (296)
T ss_dssp CCCBHHHHHHCHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred EECCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9468024328999999999999999999866354
No 43
>>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043} (A:1-275)
Probab=86.63 E-value=2.2 Score=23.72 Aligned_cols=153 Identities=11% Similarity=0.087 Sum_probs=71.3
Q ss_pred CCCCCCCHHHHHHH-----HCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE---E
Q ss_conf 45332214432232-----207886899899999999749989998247883348889999988740001367415---8
Q gi|254780438|r 3 TSVSVNLNAVAVLR-----NRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL---N 74 (261)
Q Consensus 3 t~LsVNidhiAtLR-----naRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el---N 74 (261)
.|++++..++.+=. ...+.....+.++...+.++|.+||=++.+..-- .+...+++.+... ++++ +
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~~~vel~~~~~~~----~~~~~~~~~l~~~--g~~~~~~~ 81 (275)
T 3ktc_A 8 PEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPG----VTLSEVKDALKDA--GLKAIGIT 81 (275)
T ss_dssp CCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTT----CCHHHHHHHHHHH--TCEEEEEE
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC----CCHHHHHHHHHHC--CCEEEEEE
T ss_conf 74567840677878877778879998989999999872788865127888665----6899999999976--99788860
Q ss_pred EEE-----------CCC-----------HHHHHHHHHHCCCEEEEEECCCC-----CCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 883-----------485-----------68999998507212897101655-----533357822133378899999862
Q gi|254780438|r 75 IEG-----------YPN-----------ETFLNLCERYKPEQITLVPDDPH-----QLTSDHGWDFLQNQALLTKTVARL 127 (261)
Q Consensus 75 iEg-----------~p~-----------~e~i~ia~~ikP~qvtLVPe~r~-----elTTegGldv~~~~~~L~~~i~~l 127 (261)
.-. .+. .++++++..+....+.+.|-.+. +...+..|+- -.+.+..+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lg~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~a 159 (275)
T 3ktc_A 82 PEIYLQKWSRGAFTNPDPAARAAAFELXHESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKL--AVDGXRDLAGAN 159 (275)
T ss_dssp ECTTSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHH--HHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHH
T ss_conf 688566666776789699999999999999999998639972798214677677865379999999--999999999986
Q ss_pred CCCCCEEEEEECCCC---------CCHHHHHHHHCCCCEEE--ECCCCC
Q ss_conf 026963899725444---------41479999740661465--112111
Q gi|254780438|r 128 HNLGSRISLFADGNG---------NEHSLQAAKLTGADCIE--LYTGPY 165 (261)
Q Consensus 128 ~~~girvSLFIDpd~---------~q~~i~~a~~~Gad~VE--lhTG~Y 165 (261)
.+.|+++++ +|-+ ..........++.+++- +-+|..
T Consensus 160 ~~~gv~i~~--E~~~~~~~~~~~t~~~~~~l~~~v~~~~~g~~~D~~H~ 206 (275)
T 3ktc_A 160 PDVKFAIEY--KPREPRVKXTWDSAARTLLGIEDIGLDNVGVLLDFGHA 206 (275)
T ss_dssp TTSEEEEEC--CSCSSSSEESSCSHHHHHHHHHHHTCTTEEEEEEHHHH
T ss_pred HCCCEEEEC--CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHH
T ss_conf 405855302--66788666125889999999986226661367630167
No 44
>>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti} (A:)
Probab=86.44 E-value=2.1 Score=23.79 Aligned_cols=228 Identities=12% Similarity=0.066 Sum_probs=126.0
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE---EECC
Q ss_conf 4533221443223220788689989999999974998999824788334888999998874000136741588---8348
Q gi|254780438|r 3 TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNI---EGYP 79 (261)
Q Consensus 3 t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNi---Eg~p 79 (261)
.++|+|..=. +..-++.++...+.++|.++|-+++.+ ..+.+...+++.+... ++++.- -..+
T Consensus 6 ~~i~~~~~~~--------~~~~~~~~~~~~~~~~G~~~iEl~~~~----~~~~~~~~~~~~l~~~--gi~~~~~~~~~~~ 71 (284)
T 3ju2_A 6 EGLSINLATI--------REQCGFAEAVDICLKHGITAIAPWRDQ----VAAIGLGEAGRIVRAN--GLKLTGLCRGGFF 71 (284)
T ss_dssp TTEEEEGGGG--------TTTCCHHHHHHHHHHTTCCEEECBHHH----HHHHCHHHHHHHHHHT--TCEESCEEEEECC
T ss_pred CCHHHHHHHH--------CCCCCHHHHHHHHHHHCCCEEEECCCC----CCCCCHHHHHHHHHHC--CCEEEEECCCCCC
T ss_conf 2411459987--------479999999999998099999975766----6757999999999970--9868883577666
Q ss_pred ---C-----------HHHHHHHHHHCCCEEEEEE--CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC-
Q ss_conf ---5-----------6899999850721289710--1655533357822133378899999862026963899725444-
Q gi|254780438|r 80 ---N-----------ETFLNLCERYKPEQITLVP--DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG- 142 (261)
Q Consensus 80 ---~-----------~e~i~ia~~ikP~qvtLVP--e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~- 142 (261)
. ..+++++....+..+.+.| ..+...+++..|+.. .+.++++....++.|+++.+=--+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~i~~a~~lg~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~a~~~gi~l~iE~~~~~~ 149 (284)
T 3ju2_A 72 PAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMV--VEGIAAVLPHARAAGVPLAIEPLHPMY 149 (284)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHTBSCEEEECBCCCTTCCCHHHHHHHH--HHHHHHHHHHHHHHTCCEEECCCCGGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH--HHHHHHHHHHHHHCCEEEEECCCCCCC
T ss_conf 799989999999999999899999689842133310246789999999999--999999999987504001103565646
Q ss_pred --------CCHHHHHHHHCCCCEE--EECCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHCCC----------EEEECCC
Q ss_conf --------4147999974066146--51121110244435643366688-9998766541562----------3520789
Q gi|254780438|r 143 --------NEHSLQAAKLTGADCI--ELYTGPYGACYNNPQQERIFLNK-LAITAQLAQKMDL----------QINAGHD 201 (261)
Q Consensus 143 --------~q~~i~~a~~~Gad~V--ElhTG~Ya~a~~~~~~~~~el~~-i~~aa~~A~~lgL----------~VnAGHg 201 (261)
....+....+++.+.| .+=+|.+...-.... ..+.+ ...-....|-.+. .+--|-|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~vg~~~D~~h~~~~g~~~~---~~~~~~~~~~i~~vHi~D~~~~~~~~~~~~~~~G~G 226 (284)
T 3ju2_A 150 AADRACVNTLGQALDICETLGPGVGVAIDVYHVWWDPDLAN---QIARAGKMKAILAHHICDWLVPTKDMLTDRGMMGDG 226 (284)
T ss_dssp TTTTBSCCCHHHHHHHHHHHCTTEEEEEEHHHHTTCTTHHH---HHHHHHHTTCEEEEEECBCCSSCCCSSSBCBCTTSS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHH---HHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 68721201699999888742760035532025541799689---999864135589999635666553345677789883
Q ss_pred -CCHHHHHHHHHHCCCCEEEEEHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -89877999997369963884259999----9999940999999999999741
Q gi|254780438|r 202 -LTIQNIPNLINAIPYISEISVGHAFA----ATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 202 -Ln~~Nl~~~i~~Ip~I~EvsIGHaiI----seAl~~GL~~aI~~~~~ii~~~ 249 (261)
+++.-+-..+.++++=--+++-+.-- .+-....+...+.-+++++.+.
T Consensus 227 ~id~~~~~~~L~~~gy~g~~~~E~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a 279 (284)
T 3ju2_A 227 VIDLKGIRRRIEAAGFHGAQEVEIFSADNWWKRPADEVIATCVERYRNCCEGH 279 (284)
T ss_dssp SCCHHHHHHHHHHTTCCCCEEECCCBTTTGGGSCHHHHHHHHHHHHHHHTCC-
T ss_pred CCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 14899999999981996489998578764434899999999999999998310
No 45
>>2h8z_A Xenobiotic reductase A; beta-alpha barrel, oxidoreductase; HET: FMN 8CM; 1.42A {Pseudomonas putida} PDB: 2h90_A* 2h8x_A* (A:1-104,A:149-359)
Probab=86.25 E-value=2.9 Score=22.85 Aligned_cols=216 Identities=16% Similarity=0.102 Sum_probs=120.6
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHC--CCCEEEE-----ECC----C-CCCCCCHHHHHHHHHHHC---CCCCCCEEEEEE
Q ss_conf 223220788689989999999974--9989998-----247----8-833488899999887400---013674158883
Q gi|254780438|r 13 AVLRNRRNLPWPNLVHIGKIALQS--GASGLTV-----HPR----P-DQRHIRYTDLPEIRRLID---EQFPKAELNIEG 77 (261)
Q Consensus 13 AtLRnaRg~~~P~~~~~a~~~~~~--GadgITv-----H~R----~-DrRHI~~~Dv~~l~~~~~---~~~~~~elNiEg 77 (261)
++-|+.=....|+...+..-...+ |+--|++ +++ | +-.=-.++.+.-+++++. .+-.++=+-|-=
T Consensus 22 pm~~~~~~~g~~~~~~~~~y~~ra~~~~glii~e~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~~~~Ql~h 101 (315)
T 2h8z_A 22 PMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAH 101 (315)
T ss_dssp CCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCEECSSHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEC
T ss_conf 43888278998899999999999706973999821587612157999752560234157889999987622400210120
Q ss_pred CCC--------HHHHH---HHHHHCCCEEEEE-----------ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEE
Q ss_conf 485--------68999---9985072128971-----------01655533357822133378899999862026-9638
Q gi|254780438|r 78 YPN--------ETFLN---LCERYKPEQITLV-----------PDDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRI 134 (261)
Q Consensus 78 ~p~--------~e~i~---ia~~ikP~qvtLV-----------Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~-girv 134 (261)
.-. ++|.. ++.+.--+-|=|- =-..+..+.+-|=++.....++.++++.+++. +..+
T Consensus 102 ~Gr~~eI~~~~~~f~~aA~~a~~aGfDgIein~a~gyl~~qf~cP~~n~r~~~~G~~l~~r~~~~~eii~~ir~~~g~~~ 181 (315)
T 2h8z_A 102 AGRLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 181 (315)
T ss_dssp CGGHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECC
T ss_conf 77699999999999999889998296702313455520024430247655554567743211456666663243032125
Q ss_pred --EEEECCC-----------CCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf --9972544-----------441479999740661465112111024443564336668899987665415623520789
Q gi|254780438|r 135 --SLFADGN-----------GNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHD 201 (261)
Q Consensus 135 --SLFIDpd-----------~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHg 201 (261)
.+-+-++ ....-++...+.|+|.|.+|+|.+-..+........ . ..-+.......++-|=+.-|
T Consensus 182 ~v~~R~~~~d~~~~~~~~~e~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~-~--~~~~~~ir~~~~ipvi~~Gg 258 (315)
T 2h8z_A 182 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAF-M--GPIAERVRREAKLPVTSAWG 258 (315)
T ss_dssp CEEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCCEEEEECCCCSSCCCCCCCTTT-T--HHHHHHHHHHHTCCEEECSS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCC-C--HHHHHHHHHHCCCEEEEECC
T ss_conf 55434673223555677446788888999865975477530131167443347431-0--68999999874960899768
Q ss_pred C-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 8-987799999736996388425999999999
Q gi|254780438|r 202 L-TIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 202 L-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
+ +.+....++. -...+=|.||-+++++--+
T Consensus 259 I~s~e~a~~~l~-~g~~D~V~igR~~l~dP~l 289 (315)
T 2h8z_A 259 FGTPQLAEAALQ-ANQLDLVSVGRAHLADPHW 289 (315)
T ss_dssp TTSHHHHHHHHH-TTSCSEEECCHHHHHCTTH
T ss_pred CCCHHHHHHHHH-CCCCCCHHHHHHHHHCCCH
T ss_conf 699999999998-7995331663998869159
No 46
>>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose phosphate pathway; 2.30A {Solanum tuberosum} (A:)
Probab=85.92 E-value=3 Score=22.74 Aligned_cols=207 Identities=11% Similarity=0.049 Sum_probs=124.6
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCC--CC--CCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEE
Q ss_conf 886899899999999749989998247883--34--88899999887400013674158883485689999985072128
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQ--RH--IRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQI 95 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~Dr--RH--I~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qv 95 (261)
..++.++.++++.++++|++.|.+....-. .. ...+-+..++..+. .....-.=.....++++.+.+..-+.+
T Consensus 19 a~d~~~~~~~~~~~~~~G~~~i~i~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~agad~v 95 (230)
T 1rpx_A 19 SANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITD---LPLDVHLMIVEPDQRVPDFIKAGADIV 95 (230)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCC---SCEEEEEESSSHHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCC---CCEEEEEEEEEHHHHHHHHHHCCCCEE
T ss_conf 05999999999999975998899978779717765638689999864247---635578776305667788874377136
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 97101655533357822133378899999862026963899725444414799997406614651121110244435643
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQE 175 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~ 175 (261)
++- +++. ....+..+++..++.|..+-+++.+.... ....+...+++.+.++.--+..........
T Consensus 96 ~i~-----------~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T 1rpx_A 96 SVH-----------CEQS--STIHLHRTINQIKSLGAKAGVVLNPGTPL-TAIEYVLDAVDLVLIMSVNPGFGGQSFIES 161 (230)
T ss_dssp EEE-----------CSTT--TCSCHHHHHHHHHHTTSEEEEEECTTCCG-GGGTTTTTTCSEEEEESSCTTCSSCCCCTT
T ss_pred EEE-----------CCCC--CCCCHHHHHHHHHHCCCEEEEEECCCCCH-HHHHHHHHHCCEEEEEEECCCCCCCCCHHH
T ss_conf 762-----------3334--54059999999997698599995799987-999999965798999873699763210024
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3666889998766541562352078989877999997369963884259999999994099999999999974
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
..+..............++-|-+|-|.+-+|+..++. -+.+=|-+|-+|... --..+++++|++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~i~~~Gg~~~~~~~~~~~--~GadgvvvGsaI~~~---~dp~~~~~~~~~~i~~ 229 (230)
T 1rpx_A 162 QVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIE--AGANALVAGSAVFGA---PDYAEAIKGIKTSKRP 229 (230)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHH--HTCCEEEESHHHHTS---SCHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHCCC
T ss_conf 5566777655666437724899988868999999998--699999978798689---9999999999974489
No 47
>>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A* (A:)
Probab=85.41 E-value=3.2 Score=22.58 Aligned_cols=127 Identities=11% Similarity=-0.019 Sum_probs=77.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-C--CEE--EEEEC--------CCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 655533357822133378899999862026-9--638--99725--------4444147999974066146511211102
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNL-G--SRI--SLFAD--------GNGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~-g--irv--SLFID--------pd~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
..+..|.+-|=++.....++.++++.+++. + +.| -+..+ ++......+...+.|++.+.+|.+....
T Consensus 177 ~~n~r~d~yGgsl~nr~r~~~eii~air~~~~~~~~v~iR~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 256 (343)
T 3kru_A 177 LSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNV 256 (343)
T ss_dssp TTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCC
T ss_conf 77888776678866735889999999976741577405632510014688987999999999886344302202555455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 44435643366688999876654156235207898987799999736996388425999999999
Q gi|254780438|r 168 CYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 168 a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
....+.... ..+....+.+.+.-+.+| |---+.+.....+++ ...+=|.||-.++++--+
T Consensus 257 ~~~~~~~~~---~~~~~~i~~~~~~pvi~~-G~i~~~~~a~~~l~~-~~~D~V~~gR~~ladP~l 316 (343)
T 3kru_A 257 DINLYPGYQ---VKYAETIKKRCNIKTSAV-GLITTQELAEEILSN-ERADLVALGRELLRNPYW 316 (343)
T ss_dssp CCCCCTTTT---HHHHHHHHHHHTCEEEEE-SSCCCHHHHHHHHHT-TSCSEEEESHHHHHCTTH
T ss_pred CCCCCCCCC---HHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHC-CCCEEHHHHHHHHHCCHH
T ss_conf 557775321---679999999749888998-994999999999987-992126863999879349
No 48
>>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} (A:)
Probab=85.37 E-value=0.63 Score=27.43 Aligned_cols=167 Identities=9% Similarity=-0.023 Sum_probs=102.7
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH-HHHHHHHCCCCCCCEEEEEEC-CCHHHHHHHHHHCCCEEE
Q ss_conf 788689989999999974998999824788334888999-998874000136741588834-856899999850721289
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDL-PEIRRLIDEQFPKAELNIEGY-PNETFLNLCERYKPEQIT 96 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv-~~l~~~~~~~~~~~elNiEg~-p~~e~i~ia~~ikP~qvt 96 (261)
.+.+..++.+.+..++++|+|-|.+-.. +-...+. ..+++.+ ......-+. -.++++..+.+...+.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~G~d~i~i~~~----~~~~~~~i~~~~~~~-----~~~~~~~~~i~~~~~v~~~~~~ga~~i~ 103 (225)
T 1mxs_A 33 TIAREEDILPLADALAAGGIRTLEVTLR----SQHGLKAIQVLREQR-----PELCVGAGTVLDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEESS----STHHHHHHHHHHHHC-----TTSEEEEECCCSHHHHHHHHHHTCSSEE
T ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEECC----CCHHHHHHHHHHHHC-----CCEEEEEEECCCHHHHHHHHHCCCCEEE
T ss_conf 7499999999999999869988999589----804999999999758-----9838976513679999999978981997
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+ ...........++.|..+..-+-+ ++ .+..+..+|++.+=+...... .
T Consensus 104 ~-------------------~~~~~~~~~~~~~~g~~~~~~~~~-~~--e~~~a~~~g~~~~~~~~~~~~-----~---- 152 (225)
T 1mxs_A 104 T-------------------PGITEDILEAGVDSEIPLLPGIST-PS--EIMMGYALGYRRFKLFPAEIS-----G---- 152 (225)
T ss_dssp C-------------------SSCCHHHHHHHHHCSSCEECEECS-HH--HHHHHHTTTCCEEEETTHHHH-----T----
T ss_pred C-------------------CCCCHHHHHHHHHCCCCCCCCCCC-HH--HHHHHHHCCCCEEEECCCCCC-----C----
T ss_conf 7-------------------989999999998659972688799-99--999999869881885543223-----6----
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH
Q ss_conf 666889998766541562352078989877999997369963884259999999
Q gi|254780438|r 177 IFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATA 230 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseA 230 (261)
.........+...++.|-|.=|.+.+|+..+++ -+.+=|-+|-+|....
T Consensus 153 ---~~~~~~~~~~~~~~ipi~a~GGi~~~~~~~~~~--aGAd~v~vgsai~~~~ 201 (225)
T 1mxs_A 153 ---GVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMA--LPNVMCVGTTWMLDSS 201 (225)
T ss_dssp ---HHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHH--STTBCCEEECTTSCHH
T ss_pred ---CHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--CCCEEEEECCCCCCHH
T ss_conf ---899999985303468066347989899999984--7884999765448988
No 49
>>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} (A:)
Probab=84.97 E-value=3.3 Score=22.44 Aligned_cols=125 Identities=9% Similarity=-0.040 Sum_probs=86.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCC-C-CEEEEEECCC--------CCC---HHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 55533357822133378899999862026-9-6389972544--------441---479999740661465112111024
Q gi|254780438|r 102 PHQLTSDHGWDFLQNQALLTKTVARLHNL-G-SRISLFADGN--------GNE---HSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 102 r~elTTegGldv~~~~~~L~~~i~~l~~~-g-irvSLFIDpd--------~~q---~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
.+..|-+-|=++.....++.++++.+++. + ..|++-+-+. ..+ .......+.|+|.+.+|.+.|-..
T Consensus 202 ~N~R~D~yGGslenR~r~~~eii~~ir~~~g~~~v~vr~~~~~~~~~~~~~~e~~~~~~~~~e~~g~d~l~v~~~~~~~~ 281 (376)
T 1icp_A 202 VNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMK 281 (376)
T ss_dssp TCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 78646868995666589999999999986598726899602221367888628999999987545774467887448766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 4435643366688999876654156235207898987799999736996388425999999999
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
........ +..+.........-|-+|+-.+.+.....++. ...+=|.+|-.++++-=+
T Consensus 282 ~~~~~~~~-----~~~~~~i~~~~~~~v~~g~i~t~e~a~~~l~~-g~~D~V~~gR~~ladP~l 339 (376)
T 1icp_A 282 TAWEKIEC-----TESLVPMRKAYKGTFIVAGGYDREDGNRALIE-DRADLVAYGRLFISNPDL 339 (376)
T ss_dssp C------C-----CCCSHHHHHHCCSCEEEESSCCHHHHHHHHHT-TSCSEEEESHHHHHCTTH
T ss_pred CCCCCCCC-----HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCCH
T ss_conf 67775432-----78999998635888899799898999999986-996641652998879229
No 50
>>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor} (A:)
Probab=84.84 E-value=3.4 Score=22.40 Aligned_cols=220 Identities=13% Similarity=0.054 Sum_probs=112.3
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCC-----CCHHHHHHHHHHHCCCCCCCEEEEEE--------------------
Q ss_conf 89989999999974998999824788334-----88899999887400013674158883--------------------
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRH-----IRYTDLPEIRRLIDEQFPKAELNIEG-------------------- 77 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRH-----I~~~Dv~~l~~~~~~~~~~~elNiEg-------------------- 77 (261)
..++.++...+.++|.+||-+++.+...+ ..+.++..++..+..+ ++++..-.
T Consensus 14 ~~~l~~~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (340)
T 2zds_A 14 DLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKY--GLKCWAISNHLVGQAVCDAIIDERHEAI 91 (340)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHCSCCSHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCHHHHHHHCCC
T ss_conf 99899999999984999899805777766000008989999999999983--9968996314577657770110233035
Q ss_pred --------CC-----------CHHHHHHHHHHCCCEEEEEECCCCCCCC-----------CCCCCHHHHHHHHHHHHHHH
Q ss_conf --------48-----------5689999985072128971016555333-----------57822133378899999862
Q gi|254780438|r 78 --------YP-----------NETFLNLCERYKPEQITLVPDDPHQLTS-----------DHGWDFLQNQALLTKTVARL 127 (261)
Q Consensus 78 --------~p-----------~~e~i~ia~~ikP~qvtLVPe~r~elTT-----------egGldv~~~~~~L~~~i~~l 127 (261)
++ ....++++.++.-+.+++.|-....-+. |-+|+. -.+.|..+....
T Consensus 92 ~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~~~~~e~~~~~--~~~~l~~~~~~a 169 (340)
T 2zds_A 92 LPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAXFPPAPESXIERGYQD--FADRWNPILDVF 169 (340)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHHH
T ss_conf 864441564306899999999999999999729985886035556776778886420105999999--999999999999
Q ss_pred CCCCCEEEEEECCCCC----CHHHHHHHH-CCCC--EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------
Q ss_conf 0269638997254444----147999974-0661--46511211102444356433666889998766541562------
Q gi|254780438|r 128 HNLGSRISLFADGNGN----EHSLQAAKL-TGAD--CIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDL------ 194 (261)
Q Consensus 128 ~~~girvSLFIDpd~~----q~~i~~a~~-~Gad--~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL------ 194 (261)
++.|+++.+--.+... ....+.... .+.+ .+.+=+|.+..+-.+. ...+..+ ..+....-+
T Consensus 170 ~~~gi~l~~E~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~D~~h~~~~g~~~---~~~~~~~---~~~i~~~Hi~D~~~~ 243 (340)
T 2zds_A 170 DAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDP---VGFLWDF---RDRIYHVDCKEARKR 243 (340)
T ss_dssp HHHTCEEEEECCTTSSCCSHHHHHHHHHHTTTCTTEEEEECCHHHHHTTCCH---HHHHHHT---GGGEEEEEECEEEEC
T ss_pred HHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHEECCCCHHHHCCCCH---HHHHHHC---CCEEEEEEECCCCCC
T ss_conf 9839956885465312343668999999602684021002332054338999---9999860---470879996226566
Q ss_pred ----------------------EEEECC-CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ----------------------352078-989877999997369963884259999999994099999999999974105
Q gi|254780438|r 195 ----------------------QINAGH-DLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 195 ----------------------~VnAGH-gLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
.+-.|. .+++..+...+....+=--+++=+.--..--+-++.+++..+++++.+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~id~~~i~~~l~~~gy~g~i~~E~~~~~~~~~~~~~~~~~~lr~~~~~~~~ 323 (340)
T 2zds_A 244 LDGRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRXLRSIDYQGPVSVEWEDAGXDRLQGAPEALTRLKAFDFEPPS 323 (340)
T ss_dssp CCSSSCTTCTTCCTTCTTSSEEEECTTSSCCCHHHHHHHHHHTTCCSCEEECCCCTTSCHHHHHHHHHHHHHTTCCCCC-
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCH
T ss_conf 55445644678762120126641289997447999999999879974999998359999889999999999972375444
Q ss_pred H
Q ss_conf 6
Q gi|254780438|r 252 N 252 (261)
Q Consensus 252 ~ 252 (261)
.
T Consensus 324 ~ 324 (340)
T 2zds_A 324 A 324 (340)
T ss_dssp -
T ss_pred H
T ss_conf 6
No 51
>>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} (A:241-452)
Probab=84.05 E-value=3.6 Score=22.18 Aligned_cols=166 Identities=12% Similarity=0.004 Sum_probs=115.6
Q ss_pred HHHHHHHHHCCCCEEEEECCCC-CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC-HHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9999999974998999824788-33488899999887400013674158883485-689999985072128971016555
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPD-QRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN-ETFLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~D-rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~-~e~i~ia~~ikP~qvtLVPe~r~e 104 (261)
.+-++.+.++|++.|-+...+. .|.+...-...+++.+. .....+=.+.. +++.+++.+...+.|.|=.+.
T Consensus 25 ~e~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~i~~~~~----~~~v~v~v~~~~~~~~~~~~~~g~d~v~l~~~~--- 97 (212)
T 1pii_A 25 GQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAP----LQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNE--- 97 (212)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHCC----CEEEEEESSCCHHHHHHHHHHHTCSEEEECSCC---
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC----CCEEEEEECCCHHHHHHHHHHCCCCEEEECCCC---
T ss_conf 4899999866998897746899988679999999997479----874799937999999999985599868988999---
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 33357822133378899999862026963899725444414799997406614651121110244435643366688999
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAI 184 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~ 184 (261)
. ..+...++.....++.+..-+++..+ +..+.+.|+|.|=+.+....... ... +.
T Consensus 98 --------~----~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~a~~~~~D~il~~~~~~~~g~----~~~--~~---- 152 (212)
T 1pii_A 98 --------E----QLYIDTLREALPAHVAIWKALSVGET---LPAREFQHVDKYVLDNGQGGSGQ----RFD--WS---- 152 (212)
T ss_dssp --------C----HHHHHHHHHHSCTTSEEEEEEECSSS---CCCCCCTTCCEEEEESCSCCSSC----CCC--GG----
T ss_pred --------C----HHHHHHHHHHCCCCEEEEEECCCCCC---CCHHHHHHHHHHHCCCCCCCCCC----EEC--HH----
T ss_conf --------8----89999997646764699984164453---12566740106443789696887----868--88----
Q ss_pred HHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHH
Q ss_conf 87665415623520789898779999973699638842599999
Q gi|254780438|r 185 TAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAA 228 (261)
Q Consensus 185 aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIs 228 (261)
.......+.|-|.=|+|.+|+..++. .+.+=+.+|=+|..
T Consensus 153 --~l~~~~~~pi~~~GGI~~~ni~~~~~--~G~dgi~v~s~i~~ 192 (212)
T 1pii_A 153 --LLNGQSLGNVLLAGGLGADNCVEAAQ--TGCAGLDFNSAVES 192 (212)
T ss_dssp --GGTTSCCTTEEEESSCCTTTHHHHHT--TCCSEEEECGGGEE
T ss_pred --HHCCCCCCCEEEECCCCHHHHHHHHH--CCCCEEECCCCCCC
T ss_conf --83677789879987899999999985--69999991572258
No 52
>>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} (A:)
Probab=83.74 E-value=3.7 Score=22.09 Aligned_cols=124 Identities=18% Similarity=0.183 Sum_probs=74.8
Q ss_pred HHHHCCCEEEEEECCCCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCCC
Q ss_conf 9850721289710165553335782-21333788999998620269638997-254444147999974066146511211
Q gi|254780438|r 87 CERYKPEQITLVPDDPHQLTSDHGW-DFLQNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 87 a~~ikP~qvtLVPe~r~elTTegGl-dv~~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG~ 164 (261)
..+...+.+++ .|.-.-..|..=| .+ -...++.++..+++.|.+++++ .+.+.+ ..++...++|+|++-+..+.
T Consensus 202 ~~~ag~~~i~~-~d~~~~~lsp~~~~e~--~~p~~k~i~~~i~~~g~~~~~~h~~g~~~-~~~~~~~~~g~d~~~~~~~~ 277 (353)
T 1j93_A 202 QADSGAQAVQI-FDSWATELSPVDFEEF--SLPYLKQIVDSVKLTHPNLPLILYASGSG-GLLERLPLTGVDVVSLDWTV 277 (353)
T ss_dssp HHHTTCSEEEE-ECGGGGGSCHHHHHHH--THHHHHHHHHHHHHHSTTCCEEEECSSCT-TTGGGGGGGCCSEEECCTTS
T ss_pred HHHCCCCEEEE-ECCHHHHHCHHHHHHH--HHHHHHHHHHHHHHHCCCCCEEEECCCCH-HHHHHHHHHCCCCCCCCCCC
T ss_conf 99627988998-3232534167999876--36889999999986279987785058608-88788887377853553111
Q ss_pred -CHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHCCCEEEECCCC----CHHHHHHHHHHCC
Q ss_conf -1024443-----------------5643366688999876654156235207898----9877999997369
Q gi|254780438|r 165 -YGACYNN-----------------PQQERIFLNKLAITAQLAQKMDLQINAGHDL----TIQNIPNLINAIP 215 (261)
Q Consensus 165 -Ya~a~~~-----------------~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL----n~~Nl~~~i~~Ip 215 (261)
...+... ...+++ .+..+++.+....-|+-++.|||+ ..+|+..++....
T Consensus 278 d~~~~~~~~g~~~~~~G~~~~~~~~~t~eei-~~~v~~~~~~~~~~g~Il~~~c~i~~~~p~eni~a~v~a~~ 349 (353)
T 1j93_A 278 DMADGRRRLGPNVAIQGNVDPGVLFGSKEFI-TNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAK 349 (353)
T ss_dssp CHHHHHHHTCSSSEEECCBCGGGGGSCHHHH-HHHHHHHHHHHCSSSEEBCBSSCCCTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHCCCCEEEEECCCHHHHCCCHHHH-HHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf 0699999839983799388867876999999-99999999963999908869997799989999999999998
No 53
>>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} (A:)
Probab=83.63 E-value=3.8 Score=22.06 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=21.4
Q ss_pred CEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH
Q ss_conf 2352078989877999997369963884259999999
Q gi|254780438|r 194 LQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATA 230 (261)
Q Consensus 194 L~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseA 230 (261)
--+-.|+..+.+.....++. ...+=|.+|-.+|++-
T Consensus 288 ~~i~~g~~~~~~~a~~~l~~-g~~D~v~~~R~~iadP 323 (361)
T 3gka_A 288 GPFIVNENFTLDSAQAALDA-GQADAVAWGKLFIANP 323 (361)
T ss_dssp SCEEEESSCCHHHHHHHHHT-TSCSEEEESHHHHHCT
T ss_pred CCEEEECCCCHHHHHHHHHC-CCCCEEHHHHHHHHCC
T ss_conf 77899899899999999987-9975604669999791
No 54
>>3g1v_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, D70G; HET: 5FU; 1.30A {Methanothermobacter thermautotrophicusstr} PDB: 3g1s_A* 3g1x_A* 1kly_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3g1a_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 1loq_A* 1lor_A* 1km0_A* 1dv7_A 2zz3_A* 1km1_A* 1km6_A* 1km5_A* ... (A:)
Probab=83.58 E-value=1.7 Score=24.39 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=12.1
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 899999999749989998247883
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQ 49 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~Dr 49 (261)
+..++..|.++|||++|+|.-+..
T Consensus 80 ~~~~~~~~~~~gad~v~v~~~~~~ 103 (228)
T 3g1v_A 80 NEKICRATFKAGADAIIVHGFPGA 103 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTCH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCH
T ss_conf 999999998549989998613897
No 55
>>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} (A:)
Probab=83.51 E-value=3.8 Score=22.03 Aligned_cols=198 Identities=11% Similarity=-0.010 Sum_probs=101.7
Q ss_pred CCCCCHHHHHHHHHHCCC--CEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC-HHHHHHHHHHCCCEEEE
Q ss_conf 868998999999997499--899982478833488899999887400013674158883485-68999998507212897
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGA--SGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN-ETFLNLCERYKPEQITL 97 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~Ga--dgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~-~e~i~ia~~ikP~qvtL 97 (261)
.++|++-++...+.++|+ +.+-++.-+- +.--.+-+..+++.... ...--..-+.+. ..+++.+.+..-+.+|+
T Consensus 7 ~D~~~~e~~l~~i~~~~~~id~~~~~~~~~-~~~g~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~gad~i~v 83 (211)
T 3f4w_A 7 LDELTLPEAMVFMDKVVDDVDIIEVGTPFL-IREGVNAIKAIKEKYPH--KEVLADAKIMDGGHFESQLLFDAGADYVTV 83 (211)
T ss_dssp ECSCCHHHHHHHHHHHGGGCSEEEECHHHH-HHHTTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHTTCSEEEE
T ss_pred ECCCCHHHHHHHHHHHCCCCCEEEECEEEH-HCCCHHHHHHHHHHCCC--HHHHHHHHCCCCCCHHHHHHHCCCCCEEEE
T ss_conf 258999999999998179766999464002-13894799999986352--456565320347504777651045888999
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCC----CEEEECCCCCHHHHHHHH
Q ss_conf 1016555333578221333788999998620269638997254444147999974066----146511211102444356
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGA----DCIELYTGPYGACYNNPQ 173 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Ga----d~VElhTG~Ya~a~~~~~ 173 (261)
--+. ....+...++.+++.+..+..-..+... ...+...+. -..-.+||..+......
T Consensus 84 h~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 145 (211)
T 3f4w_A 84 LGVT--------------DVLTIQSCIRAAKEAGKQVVVDMICVDD---LPARVRLLEEAGADMLAVHTGTDQQAAGRK- 145 (211)
T ss_dssp ETTS--------------CHHHHHHHHHHHHHHTCEEEEECTTCSS---HHHHHHHHHHHTCCEEEEECCHHHHHTTCC-
T ss_pred EEEC--------------CHHHHHHHHHHHHHHCCEEEEEECCCCC---HHHHHHHHHHCCCCEEEEHHCCCCHHCCCC-
T ss_conf 5211--------------4667888999876423144686058979---999999876378332541204664110676-
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43366688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 174 QERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 174 ~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
...+++.. .....+..|-++=|.+.+|+..++. .+.+=+-+|-+|... -=.+++++++++.+++.+
T Consensus 146 ----~~~~~~~~--~~~~~~~~v~~~GGi~~~~~~~~~~--~Gad~ivVGraI~~a---~dp~~~~~~l~~~i~~~~ 211 (211)
T 3f4w_A 146 ----PIDDLITM--LKVRRKARIAVAGGISSQTVKDYAL--LGPDVVIVGSAITHA---ADPAGEARKISQVLLQHH 211 (211)
T ss_dssp ----SHHHHHHH--HHHCSSCEEEEESSCCTTTHHHHHT--TCCSEEEECHHHHTC---SSHHHHHHHHHHHHHHCC
T ss_pred ----CHHHHHHH--HHHCCCCCEEECCCCCCCCHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHC
T ss_conf ----89999999--9856997387579856148999998--598999988587279---999999999999998509
No 56
>>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} (A:159-277)
Probab=83.38 E-value=3.9 Score=21.99 Aligned_cols=75 Identities=16% Similarity=0.164 Sum_probs=56.2
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 999998507212897101655533357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
.+.--.+-.++++-|+.+..-.--+.......-..+.|+.+++..+..|.+|+.=.--+ ..++.|.+.|+|+||=
T Consensus 23 ~v~~~~~~g~d~IKi~~~g~~~~~~~~~~~~~~~~e~l~a~v~~Ah~~G~~v~~Ha~~~---~~~~~ai~aG~d~IeH 97 (119)
T 2qs8_A 23 AVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGXWVAVHAHGA---EGXKRAIKAGVDSIEH 97 (119)
T ss_dssp HHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSH---HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC---HHHHHHHHHCCCCCCC
T ss_conf 88876531432000000232222333444301015677999999998399621124660---6699999828863112
No 57
>>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5} (A:)
Probab=83.30 E-value=3.9 Score=21.97 Aligned_cols=205 Identities=10% Similarity=0.079 Sum_probs=112.4
Q ss_pred CCCCH---HHHHHHHHHCCCCEEEEECCCCCCC-----CCHHHHHHHH------------HHHCCCCCCCEEEEEECCCH
Q ss_conf 68998---9999999974998999824788334-----8889999988------------74000136741588834856
Q gi|254780438|r 22 PWPNL---VHIGKIALQSGASGLTVHPRPDQRH-----IRYTDLPEIR------------RLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 22 ~~P~~---~~~a~~~~~~GadgITvH~R~DrRH-----I~~~Dv~~l~------------~~~~~~~~~~elNiEg~p~~ 81 (261)
.+|++ .+.+..+.++|+|.|-+=.-....+ ++..-...+. +-+....+...+..=+...+
T Consensus 26 g~~~~~~~~~~~~~l~~~g~d~i~ig~~~~~~~~d~~~i~~~~~~~l~~~~~~~~~~~~i~~~r~~~~~~~~~~~~~~~~ 105 (262)
T 2ekc_A 26 GYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNP 105 (262)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCH
T ss_conf 37987899999999997699999967887754446623566777876068888887532000122345641688622105
Q ss_pred -------HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCC
Q ss_conf -------8999998507212897101655533357822133378899999862026963899725444414799997406
Q gi|254780438|r 82 -------TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTG 154 (261)
Q Consensus 82 -------e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~G 154 (261)
.+.+.+.....+.+.+.. ........++..+++.|+++.+++.|...+..++.+.+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~i~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 170 (262)
T 2ekc_A 106 IFRIGLEKFCRLSREKGIDGFIVPD---------------LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAA 170 (262)
T ss_dssp HHHHCHHHHHHHHHHTTCCEEECTT---------------CCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHC
T ss_pred HHHCCHHHHHHHHHHCCCCEEEECC---------------CHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCC
T ss_conf 5316889998888856960775034---------------2265545565553203300121133322102345556426
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH---HH
Q ss_conf 614651121110244435643366688999876654156235207898987799999736996388425999999---99
Q gi|254780438|r 155 ADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAAT---AL 231 (261)
Q Consensus 155 ad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIse---Al 231 (261)
.+.+=+-..+.-..-....... .+..+.... ....++.+-+|=|++-.|....++ -+.+=|.+|-+++.. +.
T Consensus 171 ~~~i~~~~~~g~~~~~~~~~~~-~~~~l~~~~--~~~~~~pi~~~GGI~~~~~~~~~~--aGAD~VvvGs~~~~~~e~~~ 245 (262)
T 2ekc_A 171 DEMTYFVSVTGTTGAREKLPYE-RIKKKVEEY--RELCDKPVVVGFGVSKKEHAREIG--SFADGVVVGSALVKLAGQKK 245 (262)
T ss_dssp SSCEEEESSCC---------CH-HHHHHHHHH--HHHCCSCEEEESSCCSHHHHHHHH--TTSSEEEECHHHHHHHHTTC
T ss_pred CCEEEEEECCCCCCCCCCCCHH-HHHHHHHHH--HHCCCCCEEEECCCCCHHHHHHHH--HCCCEEEECHHHHHHHHHCC
T ss_conf 6337886224665421234324-678999998--630578758861659999999998--20999998789999987556
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 940999999999999
Q gi|254780438|r 232 ECGVKEAVFCFRRAC 246 (261)
Q Consensus 232 ~~GL~~aI~~~~~ii 246 (261)
.-+++++|+++++.+
T Consensus 246 ~~~~k~~i~~l~~~~ 260 (262)
T 2ekc_A 246 IEDLGNLVKELKEGL 260 (262)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 899999999999986
No 58
>>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} (A:)
Probab=83.21 E-value=3.9 Score=21.95 Aligned_cols=208 Identities=8% Similarity=0.001 Sum_probs=130.7
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEC----CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEE
Q ss_conf 88689989999999974998999824----78833488899999887400013674158883485689999985072128
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHP----RPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQI 95 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~----R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qv 95 (261)
-.+++++.++++.++++|++-|.+=. -....+.....+..++..-. ......-....+...++..+.+..-+.+
T Consensus 14 ~~d~~~~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~aGad~v 91 (227)
T 1tqx_A 14 ASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTK--SIFFDVHLMVEYPEKYVPLLKTSNQLTF 91 (227)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCS--SCEEEEEEESSCGGGGGGGCTTSSEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCC--CHHHHHHHHHCCHHHHHHHHHHCCCCEE
T ss_conf 05999999999999964999799983669507765559899987765277--5878878872482766467750576068
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-HHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 9710165553335782213337889999986202696389972544441-479999740661465112111024443564
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE-HSLQAAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q-~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
++--. ......+...++..++.|..+=+.+-+.... .....+...|+|.|-..+......-.....
T Consensus 92 ~i~~~-------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 158 (227)
T 1tqx_A 92 HFEAL-------------NEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMH 158 (227)
T ss_dssp EGGGG-------------TTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCG
T ss_pred EEEEE-------------CCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC
T ss_conf 87431-------------14331025666656425965766304665356789986106577899997414666434574
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33666889998766541562352078989877999997369963884259999999994099999999999974105
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
. -...+.. ..+..-.+-|-+|-|.+.+|+..+++ -+.+=|-+|-+|... --..++++.+++.+++.++
T Consensus 159 ~--~~~~~~~--~~~~~~~~pI~~~GGi~~~~~~~~~~--~GadgVvvGsai~~~---~dp~~~~~~~~~~i~~~~~ 226 (227)
T 1tqx_A 159 D--MMGKVSF--LRKKYKNLNIQVDGGLNIETTEISAS--HGANIIVAGTSIFNA---EDPKYVIDTMRVSVQKYLN 226 (227)
T ss_dssp G--GHHHHHH--HHHHCTTCEEEEESSCCHHHHHHHHH--HTCCEEEESHHHHTC---SSHHHHHHHHHHHHHHC--
T ss_pred C--HHHHHHH--HHHHCCCCCEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHHC
T ss_conf 0--3677888--98736786628866678888999997--699999966698789---9999999999999999854
No 59
>>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} (A:)
Probab=83.00 E-value=4 Score=21.89 Aligned_cols=189 Identities=12% Similarity=0.016 Sum_probs=114.1
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEE
Q ss_conf 07886899899999999749989998247883348889999988740001367415888348568999998507212897
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITL 97 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtL 97 (261)
..+.+..+..+.++.++++|+|.|-+-.....- ..-...+++... .....-.-...+.+.++.+.+...+.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~aG~d~i~l~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 89 (205)
T 1wa3_A 16 LRANSVEEAKEKALAVFEGGVHLIEITFTVPDA---DTVIKELSFLKE---KGAIIGAGTVTSVEQCRKAVESGAEFIVS 89 (205)
T ss_dssp ECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH---HHHHHHTHHHHH---TTCEEEEESCCSHHHHHHHHHHTCSEEEC
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHCC---CCEEEEEECCCCHHHHHHHHHCCCCEEEC
T ss_conf 979899999999999998799889996799617---899999987308---98089850322378899998536427757
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
.-+. .......+..++.+-.-+-.. + .+..+.+.|+|.|.+.........
T Consensus 90 ~~~~-------------------~~~~~~~~~~~~~~~~~~~~~-~--e~~~a~~~g~d~i~~~~~~~~~~~-------- 139 (205)
T 1wa3_A 90 PHLD-------------------EEISQFCKEKGVFYMPGVMTP-T--ELVKAMKLGHTILKLFPGEVVGPQ-------- 139 (205)
T ss_dssp SSCC-------------------HHHHHHHHHHTCEEECEECSH-H--HHHHHHHTTCCEEEETTHHHHHHH--------
T ss_pred CCCC-------------------HHHHHHHHHCCCCEECCCCCH-H--HHHHHHHCCCCEEEECCCCCCCHH--------
T ss_conf 9999-------------------999999986499751661867-8--899999869988975640125889--------
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
.+ ....+...++.|=|-=|++-+|+..++. -+.+=|-+|-+++.. -+.-.++.++++++.+++.+
T Consensus 140 ---~~--~~~~~~~~~ipi~a~GGI~~~~i~~~l~--~Ga~~v~vgsai~~~-~~~~~~~~~~~l~~~~~~~r 204 (205)
T 1wa3_A 140 ---FV--KAMKGPFPNVKFVPTGGVNLDNVCEWFK--AGVLAVGVGSALVKG-TPDEVREKAKAFVEKIRGCT 204 (205)
T ss_dssp ---HH--HHHHTTCTTCEEEEBSSCCTTTHHHHHH--HTCSCEEECHHHHCS-CHHHHHHHHHHHHHHHHHC-
T ss_pred ---HH--HHHHCCCCCCCEEEECCCCHHHHHHHHH--CCCEEEEECHHHCCC-CHHHHHHHHHHHHHHHHHHC
T ss_conf ---99--9886513578578756888899999997--899299983562589-99999999999999999750
No 60
>>2vp8_A Dihydropteroate synthase 2; RV1207, transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis} (A:)
Probab=82.42 E-value=4.2 Score=21.75 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=83.4
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC---HHHHHHHHHHHC---CCCCCCEEEEEE-----------------
Q ss_conf 868998999999997499899982478833488---899999887400---013674158883-----------------
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPRPDQRHIR---YTDLPEIRRLID---EQFPKAELNIEG----------------- 77 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~---~~Dv~~l~~~~~---~~~~~~elNiEg----------------- 77 (261)
.+.-..++.|...++.|||=|.+-.-.-++.-. ++...+|..++. +++.++++-|.-
T Consensus 62 ~d~~~~~~~a~~~i~~GAdiIDig~~st~p~~~v~~eeE~~rl~~vi~~i~~~~~~vpiSIDT~~~~v~~~al~~G~~iI 141 (318)
T 2vp8_A 62 FSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLI 141 (318)
T ss_dssp --CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCHHHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHEEECCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEE
T ss_conf 79999999999999879969997970179989788022230123214332023305887403357788777875262276
Q ss_pred -----CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCC-------CCH-HHHHHHHHHHHHHHCCCCCEE-EEEECCCC
Q ss_conf -----485689999985072128971016555333578-------221-333788999998620269638-99725444
Q gi|254780438|r 78 -----YPNETFLNLCERYKPEQITLVPDDPHQLTSDHG-------WDF-LQNQALLTKTVARLHNLGSRI-SLFADGNG 142 (261)
Q Consensus 78 -----~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegG-------ldv-~~~~~~L~~~i~~l~~~girv-SLFIDpd~ 142 (261)
...++|+.++.++....|++-=+.....++... -|+ ..-.+++.+.+..+.+.||.- .+++||..
T Consensus 142 Ndisg~~~~~~~~l~~~~~~~vV~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~IiiDPgi 220 (318)
T 2vp8_A 142 NDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAH 220 (318)
T ss_dssp EETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETTT
T ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 2543021388999998528984103346888753011101233222001446777888999988640111113103340
No 61
>>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} (A:285-439)
Probab=82.19 E-value=3.3 Score=22.43 Aligned_cols=72 Identities=14% Similarity=0.051 Sum_probs=48.6
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHCCCCEEEEC
Q ss_conf 5072128971016555333578221333788999998620269638997254444-147999974066146511
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN-EHSLQAAKLTGADCIELY 161 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~-q~~i~~a~~~Gad~VElh 161 (261)
.+.|.||+++|-...........+-. ....-..+...|++.|+++.+..+.+.. -+.+..|...|+..+=+-
T Consensus 12 ~laP~qv~Iipi~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~id~~~~~~~g~kik~A~~~g~p~~iii 84 (155)
T 3ial_A 12 LIAPIHVVIIPIGCGKKNNQESDQQV-LGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEV 84 (155)
T ss_dssp GGCSCSEEEEEESCSCTTCHHHHHHH-HHHHHHHHHHHHHTTCCCEEECCCTTSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCEEEEEEECCCCCCCHHHCCHHH-HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 62874599996676542202200999-99999999999975798899988999999999999997799889998
No 62
>>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus} (A:)
Probab=81.97 E-value=1.7 Score=24.51 Aligned_cols=187 Identities=9% Similarity=0.007 Sum_probs=102.1
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE---ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH---HHHHHCCCEE
Q ss_conf 6899899999999749989998---247883348889999988740001367415888348568999---9985072128
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV---HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLN---LCERYKPEQI 95 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv---H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~---ia~~ikP~qv 95 (261)
..-++..++..|..+|++.++. .+.+..|. .+..+++... .+.+...+.+...+.+.+ ...+...+.+
T Consensus 21 ~~~~~~~~~~~~~a~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~i 94 (268)
T 2htm_A 21 KYEDFGVMREAIAAAKAEVVTVSVRRVELKAPG----HVGLLEALEG--VRLLPNTAGARTAEEAVRLARLGRLLTGERW 94 (268)
T ss_dssp SCSCHHHHHHHHHHTTCSEEEEEEEECC-----------CHHHHTTT--SEEEEBCTTCCSHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCC----CCCHHHHCHH--EEEECHHHHHCCHHHHHHHHHHHHHHCCCCE
T ss_conf 998999999999986998799998611477888----7312341102--2772232543149999999999999549975
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 97101655533357822133378899999862026963899725444414799997406614651121110244435643
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQE 175 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~ 175 (261)
++---.+.. .+..............+.+..+.-+.--+- +++ ..+.+.+.|+|.|=.|-+.+...+..+.
T Consensus 95 ~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~-~~~--~a~~a~~~Gad~i~v~g~~~~~~~g~~~-- 164 (268)
T 2htm_A 95 VKLEVIPDP-----TYLLPDPLETLKAAERLIEEDFLVLPYMGP-DLV--LAKRLAALGTATVMPLAAPIGSGWGVRT-- 164 (268)
T ss_dssp EBCCCCSCT-----TTTCCCHHHHHHHHHHHHHTTCEECCEECS-CHH--HHHHHHHHTCSCBEEBSSSTTTCCCSTT--
T ss_pred EEEEECCCC-----CCCCCCHHHHHHHHHHHHCCCCEEEEECCC-CHH--HHHHHHHCCCCEEEEHHHHHHHCCCCCC--
T ss_conf 887733883-----457965767899999985099689862787-789--9999986498378510445530544479--
Q ss_pred HHHHHHHHHHHHHHHHCCCEEE-ECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH
Q ss_conf 3666889998766541562352-078989877999997369963884259999999
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQIN-AGHDLTIQNIPNLINAIPYISEISVGHAFAATA 230 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~Vn-AGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseA 230 (261)
+..+.+.++. ....+-|- +|-==+.+.+.+.++ . .-+=|-||-+++.-.
T Consensus 165 ---~~~l~~~~~a-~~~~ipVia~GGI~~~~dv~~al~-l-GAdaV~iGt~~~~~~ 214 (268)
T 2htm_A 165 ---RALLELFARE-KASLPPVVVDAGLGLPSHAAEVME-L-GLDAVLVNTAIAEAQ 214 (268)
T ss_dssp ---HHHHHHHHHT-TTTSSCBEEESCCCSHHHHHHHHH-T-TCCEEEESHHHHTSS
T ss_pred ---HHHHHHHHHH-CCCCCCEEEECCCCCHHHHHHHHH-C-CCCEEEECHHHHCCC
T ss_conf ---8899999975-068887686447898788999997-3-888998553766179
No 63
>>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.63A {Escherichia coli} (A:1-246)
Probab=81.66 E-value=3.6 Score=22.21 Aligned_cols=128 Identities=13% Similarity=0.066 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE-EEEECC----------------------
Q ss_conf 899899999999749989998247883348889999988740001367415-888348----------------------
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL-NIEGYP---------------------- 79 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el-NiEg~p---------------------- 79 (261)
.-++.++...+.++|.+||-+....+.-- ..+++.+... ++++ ..-+.+
T Consensus 14 ~~~l~~~~~~~~~~G~~~iEl~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (246)
T 1k77_A 14 EVPFIERFAAARKAGFDAVEFLFPYNYST------LQIQKQLEQN--HLTLALFNTAPGDINAGEWGLSALPGREHEAHA 85 (246)
T ss_dssp TSCGGGHHHHHHHHTCSEEECSCCTTSCH------HHHHHHHHHT--TCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCCCH------HHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999980999999888788999------9999999986--991899844644556675433248678999999
Q ss_pred -CHHHHHHHHHHCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC----------CCCCHHH
Q ss_conf -56899999850721289710-16555333578221333788999998620269638997254----------4441479
Q gi|254780438|r 80 -NETFLNLCERYKPEQITLVP-DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG----------NGNEHSL 147 (261)
Q Consensus 80 -~~e~i~ia~~ikP~qvtLVP-e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp----------d~~q~~i 147 (261)
..+.++++.++....+.+.| ..+...+++..|+- ..+.|..+....++.|+++.+-..+ +++ ...
T Consensus 86 ~~~~~i~~a~~lg~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~a~~~gi~~~~e~~~~~~~~~~~~~~~~-~~~ 162 (246)
T 1k77_A 86 DIDLALEYALALNCEQVHVXAGVVPAGEDAERYRAV--FIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQY-QAL 162 (246)
T ss_dssp HHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHH--HHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHH-HHH
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHH-HHH
T ss_conf 999999999973762475467877788788999999--99999999999986132035505655445543457899-999
Q ss_pred HHHHHCCCCEEEEC
Q ss_conf 99974066146511
Q gi|254780438|r 148 QAAKLTGADCIELY 161 (261)
Q Consensus 148 ~~a~~~Gad~VElh 161 (261)
+...+++.+.+-+.
T Consensus 163 ~l~~~~~~~~~~~~ 176 (246)
T 1k77_A 163 AIVEEVARDNVFIQ 176 (246)
T ss_dssp HHHHHHCCTTEEEE
T ss_pred HHHHHHCCCCCEEE
T ss_conf 99997486530233
No 64
>>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3- epimerase, D-tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima} (A:)
Probab=80.95 E-value=4.7 Score=21.40 Aligned_cols=209 Identities=11% Similarity=0.057 Sum_probs=125.8
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-------------CC-----------C
Q ss_conf 98999999997499899982478833488899999887400013674158883-------------48-----------5
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG-------------YP-----------N 80 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg-------------~p-----------~ 80 (261)
++.++...+.++|.+||-+.+.+-. +.|..++++.+... ++++.--. .+ .
T Consensus 42 ~l~~~~~~~~~~G~~~iEl~~~~~~----~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~~~~~~~~~d~~~r~~~~~~~ 115 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDPS----IVDWNEVKILSEEL--NLPICAIGTGQAYLADGLSLTHPNDEIRKKAIERV 115 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCGG----GSCHHHHHHHHHHH--TCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEECCCCCC----CCCHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999999959998995888956----17899999999985--99079985673102478777897999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC------CCCCHHHHHHHHC
Q ss_conf 689999985072128971016-555333578221333788999998620269638997254------4441479999740
Q gi|254780438|r 81 ETFLNLCERYKPEQITLVPDD-PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG------NGNEHSLQAAKLT 153 (261)
Q Consensus 81 ~e~i~ia~~ikP~qvtLVPe~-r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp------d~~q~~i~~a~~~ 153 (261)
..+++++.+.....+...|-. +.+.+.+..|+- ..+.|+.+...+++.|+++.+--.+ .++ ..++....+
T Consensus 116 ~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~--~~~~l~~~~~~a~~~gi~l~~E~~~~~~~~~~~~-~~~~li~~~ 192 (290)
T 2zvr_A 116 VKHTEVAGMFGALVIIGLVRGRREGRSYEETEEL--FIESMKRLLELTEHAKFVIEPLNRYETDFINTID-DALRILRKI 192 (290)
T ss_dssp HHHHHHHHHHTCEEEESGGGCCCTTSCHHHHHHH--HHHHHHHHHHHCSSCCEEECCCCTTTCSSCCSHH-HHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH-HHHHHHHHH
T ss_conf 9999998750486599668888888998999999--9999999776666531232344442320035489-999999981
Q ss_pred CCCEEE--ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE----EEECC-CCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 661465--112111024443564336668899987665415623----52078-98987799999736996388425999
Q gi|254780438|r 154 GADCIE--LYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQ----INAGH-DLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 154 Gad~VE--lhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~----VnAGH-gLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
|.+.+- +=||..... +.... .-+.....+....-+. +--|+ .+++.-+...+...++=-=+++=+.-
T Consensus 193 ~~~~~g~~~D~~h~~~~---~~~~~---~~~~~~~~~i~~iH~kd~~~~~~g~G~id~~~~~~~l~~~gy~g~~~~E~~~ 266 (290)
T 2zvr_A 193 NSNRVGILADTFHMNIE---EVNIP---ESLKRAGEKLYHFHVADSNRWAPGCGHFDFRSVFNTLKEIGYNRYVSVECLP 266 (290)
T ss_dssp CCTTEEEEEEHHHHHHH---CSSHH---HHHHHHGGGEEEEEECCTTSSSTTSSCCCHHHHHHHHHHTTCCSEEEECCCS
T ss_pred CCCCCCCCCCCHHHHHH---HHHHH---HHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 88543343562255554---13358---8888753757189986789999999760999999999994998079998526
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999994099999999999974
Q gi|254780438|r 227 AATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 227 IseAl~~GL~~aI~~~~~ii~~ 248 (261)
-.+.-.-++.+++..+++++.+
T Consensus 267 ~~~~~~~~~~~~~~~lr~~l~~ 288 (290)
T 2zvr_A 267 LPGGMEEAAEIAFKTLKELIIK 288 (290)
T ss_dssp TTTSHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9999899999999999999997
No 65
>>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} (A:)
Probab=80.69 E-value=4.8 Score=21.34 Aligned_cols=198 Identities=15% Similarity=0.067 Sum_probs=117.9
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC-CCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 886899899999999749989998247883348889999988740001-3674158883485689999985072128971
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQ-FPKAELNIEGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~-~~~~elNiEg~p~~e~i~ia~~ikP~qvtLV 98 (261)
..+..+..+.++.+.++|++.|-+.-+...-.-....+..+++.+... ..++.+- .+.+++.+.+...+.+.+.
T Consensus 27 ~~~~~~~~~~a~~~~~~G~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gad~v~~~ 101 (227)
T 2tps_A 27 NNTKADPVTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREAGVPFI-----VNDDVELALNLKADGIHIG 101 (227)
T ss_dssp GGCSSCHHHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHHTCCEE-----EESCHHHHHHHTCSEEEEC
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE-----ECCCHHHHHHHCCCEEEEE
T ss_conf 32354889999999987994999878885404579999999999999998298699-----7389999965047779982
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
+..... ..... ...+..+.+=.. ++. ....+.+.|+|.+-+..-.............
T Consensus 102 ~~~~~~----------------~~~~~--~~~~~~v~~~~~-~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-- 158 (227)
T 2tps_A 102 QEDANA----------------KEVRA--AIGDMILGVSAH-TMS--EVKQAEEDGADYVGLGPIYPTETKKDTRAVQ-- 158 (227)
T ss_dssp TTSSCH----------------HHHHH--HHTTSEEEEEEC-SHH--HHHHHHHHTCSEEEECCSSCCCSSSSCCCCC--
T ss_pred CCCCHH----------------HHHHH--CCCCEEEEEECC-CHH--HHHHHHHCCCCEEEEECCCCCCCCCCCCCCC--
T ss_conf 321112----------------44210--433328986333-126--9999985777768850233345544443345--
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6889998766541562352078989877999997369963884259999999994099999999999974105
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
.........+...+..|-|+=|.+.+|+..++. -+.+-|-+|-+|... --.+++++++++.+++.++
T Consensus 159 -~~~~~~~~~~~~~~~~i~a~GGi~~~~i~~~~~--~Gad~v~vgsai~~~---~dp~~~~~~~~~~l~~~~~ 225 (227)
T 2tps_A 159 -GVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQ--AGADGVSMISAISQA---EDPESAARKFREEIQTYKT 225 (227)
T ss_dssp -TTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHH--TTCSEEEESHHHHTS---SCHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHH--HCCCEEEEHHHHHCC---CCHHHHHHHHHHHHHHHHC
T ss_conf -420112444304788878736899999999998--499889984996679---9999999999999999862
No 66
>>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} (A:152-269)
Probab=79.94 E-value=5.1 Score=21.18 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=54.8
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 999998507212897101655533-357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLT-SDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elT-TegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
.++.-.+-.++++++.-+.+---. ...|+.. -..+.|+.+++..++.|.+|+.=.--+- .++.+.+.|+++||=
T Consensus 21 ~vk~~~~~g~d~ik~~~~~~~~~~~~~~~~~~-~~~eel~~~v~~A~~~G~~v~~Ha~g~~---~~~~ai~ag~~~ieH 95 (118)
T 3gnh_A 21 AVRTLKKYGAQVIXICATGGVFSRGNEPGQQQ-LTYEEMKAVVDEAHMAGIKVAAHAHGAS---GIREAVRAGVDTIEH 95 (118)
T ss_dssp HHHHHHHTTCSEEEEECBCCSSSSSCCTTCBC-SCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHTTCSEEEE
T ss_pred HHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCEEEECCCHH---HHHHHHHHCCCCCCC
T ss_conf 99987752210333320244443334665555-7899999999999970990788516505---689999845430000
No 67
>>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} (A:)
Probab=79.79 E-value=2.1 Score=23.80 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCEEEEE---ECC----CCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 78221333788999998620269638997---254----444147999974066146511211102
Q gi|254780438|r 109 HGWDFLQNQALLTKTVARLHNLGSRISLF---ADG----NGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 109 gGldv~~~~~~L~~~i~~l~~~girvSLF---IDp----d~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
-||-...-...|+..|...++.||.||.= .+- +--..-++.++++|.++||+-.|...-
T Consensus 71 fg~GT~~l~~~l~eki~l~~~~~V~v~~GGTl~E~~~~q~~~~~yl~~~k~lGf~~IEiS~G~i~l 136 (276)
T 1u83_A 71 FGWGTSLLTKDLEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPX 136 (276)
T ss_dssp ECTTGGGGCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCC
T ss_pred ECCCEECCCHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 658510027889999999998699586798999999980999999999998699889977985108
No 68
>>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} (A:)
Probab=79.74 E-value=5.1 Score=21.14 Aligned_cols=209 Identities=16% Similarity=0.060 Sum_probs=124.6
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECC--CCCCC--CCHHHHHHHHHHHCCCCCCCEEEEEECCC--HHHHHHHHHHCCC
Q ss_conf 886899899999999749989998247--88334--88899999887400013674158883485--6899999850721
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPR--PDQRH--IRYTDLPEIRRLIDEQFPKAELNIEGYPN--ETFLNLCERYKPE 93 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R--~DrRH--I~~~Dv~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia~~ikP~ 93 (261)
..+..++.+.++.+.++|++-|.+--. +..++ .-..-+..+++.. ...+..-..+. .+++..+.+.-.+
T Consensus 13 ~~d~~~~~e~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~a~~~Gad 87 (230)
T 1tqj_A 13 SADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-----KKTLDVHLMIVEPEKYVEDFAKAGAD 87 (230)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-----CSEEEEEEESSSGGGTHHHHHHHTCS
T ss_pred HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCC-----CCCEEEEEEEECHHHHHHHHHHCCCE
T ss_conf 1698999999999997599989996778964665464823220010036-----65141057884777876776422551
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHH
Q ss_conf 28971016555333578221333788999998620269638997254444147999974066146511211102444356
Q gi|254780438|r 94 QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQ 173 (261)
Q Consensus 94 qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~ 173 (261)
.+++.= ++. ....+....+..++.|..+-..+........+ .+...+++.+.+....+........
T Consensus 88 ~v~i~~-----------~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (230)
T 1tqj_A 88 IISVHV-----------EHN--ASPHLHRTLCQIRELGKKAGAVLNPSTPLDFL-EYVLPVCDLILIMSVNPGFGGQSFI 153 (230)
T ss_dssp EEEEEC-----------STT--TCTTHHHHHHHHHHTTCEEEEEECTTCCGGGG-TTTGGGCSEEEEESSCC----CCCC
T ss_pred EEEEEC-----------CCC--CCHHHHHHHHHHHHCCCCEEEEECCCCCHHHH-HHHHHHCCEEEEEEECCCCCCCCCC
T ss_conf 899841-----------445--66377899999997698279997799965789-9986301289999864787885321
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4336668899987665415623520789898779999973699638842599999999940999999999999741056
Q gi|254780438|r 174 QERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDN 252 (261)
Q Consensus 174 ~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~ 252 (261)
........-...........+-|-+|-|.+.+|+...+. -+-+=|-+|-+|..- --..+++++|++.+++.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~v~~~GGi~~~~~~~~~~--~GAdgvvvGsaI~~a---~dp~~~~~~~~~~i~~~~~~ 227 (230)
T 1tqj_A 154 PEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLE--AGANAIVAGSAVFNA---PNYAEAIAGVRNSKRPEPQL 227 (230)
T ss_dssp GGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHH--HTCCEEEESHHHHTS---SCHHHHHHHHHTCCC-----
T ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHCCCCHHH
T ss_conf 001678898888753147882499983889888999998--799999978588389---99999999999747342211
No 69
>>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus HB8} (A:)
Probab=78.00 E-value=5.8 Score=20.78 Aligned_cols=203 Identities=12% Similarity=0.099 Sum_probs=130.8
Q ss_pred CCCCCHHHHH--HHHHHCCCCEEEEE-----CCCCCCCCCH----------------HHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 8689989999--99997499899982-----4788334888----------------99999887400013674158883
Q gi|254780438|r 21 LPWPNLVHIG--KIALQSGASGLTVH-----PRPDQRHIRY----------------TDLPEIRRLIDEQFPKAELNIEG 77 (261)
Q Consensus 21 ~~~P~~~~~a--~~~~~~GadgITvH-----~R~DrRHI~~----------------~Dv~~l~~~~~~~~~~~elNiEg 77 (261)
..+|++-.+. ...++.|+|-|-+- |--|--=|+. ..+..+++.. .+++.+=.
T Consensus 24 ~g~p~~~~~~~~~~~~~~g~d~i~ig~p~~dp~~Dg~~i~~~~~~al~~g~~~~~~~~~i~~ir~~~-----~~p~~~~~ 98 (271)
T 1ujp_A 24 AGFPSREGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT-----EKPLFLMT 98 (271)
T ss_dssp TTSSCHHHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-----CSCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCC-----CCCEEEEE
T ss_conf 7079878999999998768998996788788566787345442110034642100899999987236-----77569997
Q ss_pred C-------CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 4-------856899999850721289710165553335782213337889999986202696389972544441479999
Q gi|254780438|r 78 Y-------PNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA 150 (261)
Q Consensus 78 ~-------p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a 150 (261)
+ ..++|++.+.+..++.+++.-+..++ ...+++.+++.|+.+.+++.|....+.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~d~i~~~~~~~~~---------------~~~~~~~~~~~g~~~i~~~~~~t~~~~i~~~ 163 (271)
T 1ujp_A 99 YLNPVLAWGPERFFGLFKQAGATGVILPDLPPDE---------------DPGLVRLAQEIGLETVFLLAPTSTDARIATV 163 (271)
T ss_dssp CHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGG---------------CHHHHHHHHHHTCEEECEECTTCCHHHHHHH
T ss_pred EECHHHCCCCHHHHHHHHHCCCEEEECCCHHHHH---------------HHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
T ss_conf 3020221782256567762496578514304555---------------6788866303662158873565406799999
Q ss_pred HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH
Q ss_conf 74066146511211102444356433666889998766541562352078989877999997369963884259999999
Q gi|254780438|r 151 KLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATA 230 (261)
Q Consensus 151 ~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseA 230 (261)
.+.....+=+++.+.-..- .......-++.+ .+.....++.+-+|=|.+-.+.... .-+-+=|-+|=+|+..-
T Consensus 164 ~~~~~~~~~~~~~~g~~g~-~~~~~~~~~~~i---~~i~~~~~~pi~vgGGI~~~~~a~~---~aGAd~vVVGSAi~~~~ 236 (271)
T 1ujp_A 164 VRHATGFVYAVSVTGVTGM-RERLPEEVKDLV---RRIKARTALPVAVGFGVSGKATAAQ---AAVADGVVVGSALVRAL 236 (271)
T ss_dssp HTTCCSCEEEECC-------------CCHHHH---HHHHTTCCSCEEEESCCCSHHHHHH---HTTSSEEEECHHHHHHH
T ss_pred HHHCCCCEEECCCCCCCCC-CCCCCHHHHHHH---HHHHHHCCCCEEEECCCCCHHHHHH---HCCCCEEEECHHHHHHH
T ss_conf 9839871886045677776-544403688998---8876513687587569798899987---46899899868999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHH
Q ss_conf 9940-9999999999997410
Q gi|254780438|r 231 LECG-VKEAVFCFRRACGQHL 250 (261)
Q Consensus 231 l~~G-L~~aI~~~~~ii~~~~ 250 (261)
-..+ +++.++++++.+++.+
T Consensus 237 ~~~~~~~~~i~~~~~~~~~~~ 257 (271)
T 1ujp_A 237 EEGRSLAPLLQEIRQGLQRLE 257 (271)
T ss_dssp HTTCCHHHHHHHHHHHHBCC-
T ss_pred HHCCCHHHHHHHHHHHHHHHH
T ss_conf 838868999999999999997
No 70
>>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis} (A:190-271)
Probab=76.60 E-value=5.1 Score=21.18 Aligned_cols=70 Identities=20% Similarity=0.227 Sum_probs=47.5
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHHCCCCEEEEC
Q ss_conf 9999985072128971016555333578221333788999998620269638997254444147999-974066146511
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQA-AKLTGADCIELY 161 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~-a~~~Gad~VElh 161 (261)
|-=++.++.=+++-++...+++ .-....+..+++.+++.++++ +|.+|..+.+..+. ++++|+..+.|+
T Consensus 11 f~Yf~~~ygl~~~~~~~~~~~~---------~ps~~~i~~l~~~ik~~~i~~-if~e~~~~~k~~~~ia~~~g~~v~~ld 80 (82)
T 2o1e_A 11 FGYLAKEYGLKQVPIAGLSPDQ---------EPSAASLAKLKTYAKEHNVKV-IYFEEIASSKVADTLASEIGAKTEVLN 80 (82)
T ss_dssp THHHHHHTTCEEEECSSCCSSS---------CCCHHHHHHHHHHTTSSCCCE-EECSSCCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHCCCEEEEECCCCCCC---------CCCHHHHHHHHHHHHHCCCCE-EEEECCCCCHHHHHHHHHHCCCEEEEC
T ss_conf 6668874684476402356522---------213357999998765258868-999488894999999997199765545
Q ss_pred C
Q ss_conf 2
Q gi|254780438|r 162 T 162 (261)
Q Consensus 162 T 162 (261)
+
T Consensus 81 p 81 (82)
T 2o1e_A 81 T 81 (82)
T ss_dssp C
T ss_pred C
T ss_conf 6
No 71
>>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae} (A:)
Probab=76.36 E-value=1.4 Score=25.09 Aligned_cols=199 Identities=11% Similarity=0.011 Sum_probs=103.2
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 86899899999999749989998-24788334888999998874000136741588834856899999850721289710
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVP 99 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVP 99 (261)
....+|+..|+.-...|++.+-+ .+.+ ....-...+.+.. ..++-.-+.-....-.+.+..--.++++
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~l~~~~~~~----~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~ln~Gcp~~~~-- 103 (260)
T 2agk_A 35 VSQHPSSYYAKLYKDRDVQGCHVIKLGP----NNDDAAREALQES-----PQFLQVGGGINDTNCLEWLKWASKVIVT-- 103 (260)
T ss_dssp --CCCHHHHHHHHHHTTCTTCEEEEESS----SCHHHHHHHHHHS-----TTTSEEESSCCTTTHHHHTTTCSCEEEC--
T ss_pred EECCCHHHHHHHHHHCCCCEEEEEECCC----CCHHHHHHHHHHC-----CCCEEECCCCCHHHHHHHHHCCCEEEEE--
T ss_conf 5459999999999987998799997884----1189999999836-----8656546864699999986289729996--
Q ss_pred CCCCCCCCCCCCCHHHHHH----HHHHHHHHHCCCCCEEEEEE-------------------CCCCCCHHHHHHHHCCCC
Q ss_conf 1655533357822133378----89999986202696389972-------------------544441479999740661
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQNQA----LLTKTVARLHNLGSRISLFA-------------------DGNGNEHSLQAAKLTGAD 156 (261)
Q Consensus 100 e~r~elTTegGldv~~~~~----~L~~~i~~l~~~girvSLFI-------------------Dpd~~q~~i~~a~~~Gad 156 (261)
|.-+..+.+ .++...+.+....+.||+=+ +.++. ..++...+.|++
T Consensus 104 ----------Gs~ll~~p~~~~~iv~~~~~~~~~~~i~vsvk~R~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~ 172 (260)
T 2agk_A 104 ----------SWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELN-ADTFRELRKYTN 172 (260)
T ss_dssp ----------GGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEES-HHHHHHHTTTCS
T ss_pred ----------EEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHH-HHHHHHHHHCCC
T ss_conf ----------667742653377899999997098619999999983479679974687401143269-999999861662
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 46511211102444356433666889998766541562352078989877999997369963884259999999994099
Q gi|254780438|r 157 CIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVK 236 (261)
Q Consensus 157 ~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~ 236 (261)
.+=+|.=.....+...... .+.++.+..+.....-+-.|-|-. +++-+..+.+.=++.+-|-||-++. +|++-.
T Consensus 173 ~i~v~~r~~~~~~~g~~~~--~~~~~~~~~~~~~~ipvi~nGgI~-s~~D~~~~~~~~~G~dgvmigra~~---~~~~~~ 246 (260)
T 2agk_A 173 EFLIHAADVEGLCGGIDEL--LVSKLFEWTKDYDDLKIVYAGGAK-SVDDLKLVDELSHGKVDLTFGSSLD---IFGGNL 246 (260)
T ss_dssp EEEEEC-------CCCCHH--HHHHHHHHHTTCSSCEEEEESCCC-CTHHHHHHHHHHTTCEEEECCTTBG---GGTCSS
T ss_pred EEEEEEECHHHHCCCCCHH--HHHHHHHHHCCCCCCCEEEEECCC-CHHHHHHHHHCCCCCCCEEEEHHHH---HCCCCC
T ss_conf 8998775123324687699--999999973536885489982899-9999999997079985589864488---739997
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999997
Q gi|254780438|r 237 EAVFCFRRACG 247 (261)
Q Consensus 237 ~aI~~~~~ii~ 247 (261)
-+..+.++.++
T Consensus 247 ~~~~e~~~~l~ 257 (260)
T 2agk_A 247 VKFEDCCRWNE 257 (260)
T ss_dssp BCHHHHHHHHH
T ss_pred CCHHHHHHHHH
T ss_conf 26999999998
No 72
>>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} (A:154-301)
Probab=76.15 E-value=6.5 Score=20.45 Aligned_cols=59 Identities=10% Similarity=0.157 Sum_probs=44.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 3335782213337889999986202696389972544441479999740661465112111
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
++++...........+...+.++.....+.++||+-.. ..+.+|+..|..+|=+-||.|
T Consensus 90 ~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~~vGD~~--~Di~aa~~aGi~~i~v~~G~~ 148 (148)
T 1ltq_A 90 QCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRT--QVVEXWRRIGVECWQVASGDF 148 (148)
T ss_dssp EEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCH--HHHHHHHHTTCCEEECSCCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCH--HHHHHHHHCCCEEEEECCCCC
T ss_conf 14688778897388999999985577787599983875--999999984991899389999
No 73
>>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative; 2.30A {Brucella melitensis 16M} (A:)
Probab=75.70 E-value=6.7 Score=20.37 Aligned_cols=186 Identities=11% Similarity=0.042 Sum_probs=113.3
Q ss_pred CCHHHHHHHHHHCCCCEEEE----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCC-CEEEEE
Q ss_conf 99899999999749989998----2478833488899999887400013674158883485689999985072-128971
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTV----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKP-EQITLV 98 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITv----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP-~qvtLV 98 (261)
-+.+..+....++|.+.|=+ +...+.+-............. ..-.-.-.......++-+.+... ...-+.
T Consensus 26 ~~k~~i~~~L~~~Gv~~iE~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (295)
T 1ydn_A 26 ADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVXAGIRRA-----DGVRYSVLVPNXKGYEAAAAAHADEIAVFI 100 (295)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-----SSSEEEEECSSHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC-----CCCHHHHHHHCCCCHHHHCCCCCEEEEEEE
T ss_conf 999999999998298989980775775468888788877421566-----752288765313201110135640887520
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------------CCCCCHHHHHHHHCCCCEEEEC-CCCC
Q ss_conf 01655533357822133378899999862026963899725------------4444147999974066146511-2111
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------------GNGNEHSLQAAKLTGADCIELY-TGPY 165 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------------pd~~q~~i~~a~~~Gad~VElh-TG~Y 165 (261)
|..+..++.-.+++.....+.+.+.++..++.|..|..-+. |+.-....+.+.+.|+|+|-|- |--.
T Consensus 101 ~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~ 180 (295)
T 1ydn_A 101 SASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR 180 (295)
T ss_dssp ESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHH
T ss_conf 14689998885105766566654778887640234431133102564200133446799988777448538961650033
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHCCCEEEECCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 024443564336668899987665--41562352078989877999997369963884
Q gi|254780438|r 166 GACYNNPQQERIFLNKLAITAQLA--QKMDLQINAGHDLTIQNIPNLINAIPYISEIS 221 (261)
Q Consensus 166 a~a~~~~~~~~~el~~i~~aa~~A--~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~Evs 221 (261)
+ .|.+....+..+ .+.. ..+++-.|---||-.-|....+..==.+-+.+
T Consensus 181 ~----~P~~v~~li~~l---~~~~p~~~i~~H~Hnd~Gla~An~laAi~aGa~~id~s 231 (295)
T 1ydn_A 181 G----TPDTVAAXLDAV---LAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDAS 231 (295)
T ss_dssp C----CHHHHHHHHHHH---HTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEB
T ss_pred H----HHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 3----168899999986---40488405662258887626775999986277789876
No 74
>>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} (A:)
Probab=75.50 E-value=6.7 Score=20.33 Aligned_cols=190 Identities=11% Similarity=0.000 Sum_probs=115.7
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEE
Q ss_conf 07886899899999999749989998247883348889999988740001367415888348568999998507212897
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITL 97 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtL 97 (261)
.++.+..++.+.+..+.++|++-|-+-.. -.|- ..-+..+++.+ +....---+--..+.+..+.+...+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~G~~~i~l~~~--~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~i~~ 91 (217)
T 3lab_A 19 IVIDDLVHAIPXAKALVAGGVHLLEVTLR--TEAG-LAAISAIKKAV----PEAIVGAGTVCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp ECCSCGGGHHHHHHHHHHTTCCEEEEETT--STTH-HHHHHHHHHHC----TTSEEEEECCCSHHHHHHHHHHTCSEEEE
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECC--CCHH-HHHHHHHHHHC----CCCEEEEEECCCHHHHHHHHHHCCCEEEC
T ss_conf 97899999999999999879988999689--9049-99999999868----99739899724368999999748999998
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
+...+ ..+.......+..++-.-.+..+. +...+..+.+.|++.+-+.++...... .
T Consensus 92 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~a~~~g~~~~~~~~~~~~~~~----~--- 148 (217)
T 3lab_A 92 PGLTP---------------ELIEKAKQVKLDGQWQGVFLPGVA-TASEVXIAAQAGITQLKCFPASAIGGA----K--- 148 (217)
T ss_dssp SSCCH---------------HHHHHHHHHHHHCSCCCEEEEEEC-SHHHHHHHHHTTCCEEEETTTTTTTHH----H---
T ss_pred CCCCH---------------HHHHHHHHCCCCCCCCCCCCCCCC-CHHHHHHHHHCCCCEEEECCHHHCCCH----H---
T ss_conf 99999---------------999999983998433554537859-889999999879997996504313789----9---
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH-----HHHHHHHHHHHHHHH
Q ss_conf 6688999876654156235207898987799999736996388425999999-----999409999999999
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAAT-----ALECGVKEAVFCFRR 244 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIse-----Al~~GL~~aI~~~~~ 244 (261)
......+...++.|-|.=|+|.+|+..++. -+.+=|-+|=+|+.. ++...+++.++++++
T Consensus 149 -----~~~~~~~~~~~ipi~a~GGI~~~~v~~~~~--~Gad~v~vGsai~~~~~~~~~~~~~~~~~~~~~~~ 213 (217)
T 3lab_A 149 -----LLKAWSGPFPDIQFCPTGGISKDNYKEYLG--LPNVICAGGSWLTESKLLIEGDWNEVTRRASEIVK 213 (217)
T ss_dssp -----HHHHHHTTCTTCEEEEBSSCCTTTHHHHHH--STTBCCEEESGGGCHHHHHHTCHHHHHHHHHHSCC
T ss_pred -----HHHHHHCCCCCCEEEEECCCCHHHHHHHHH--CCCEEEEECCHHCCHHHHHCCCHHHHHHHHHHHHH
T ss_conf -----999974579998388537999899999996--89829998831069666523899999999999998
No 75
>>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* (A:56-415)
Probab=74.88 E-value=5 Score=21.20 Aligned_cols=127 Identities=8% Similarity=-0.077 Sum_probs=64.6
Q ss_pred HHHHHHHHHHCCC-CCEEEEEECCCCCCH----HHHHHHHCCCCEEEECCCCCHHHHHHH-----------HHHHHHHHH
Q ss_conf 8899999862026-963899725444414----799997406614651121110244435-----------643366688
Q gi|254780438|r 118 ALLTKTVARLHNL-GSRISLFADGNGNEH----SLQAAKLTGADCIELYTGPYGACYNNP-----------QQERIFLNK 181 (261)
Q Consensus 118 ~~L~~~i~~l~~~-girvSLFIDpd~~q~----~i~~a~~~Gad~VElhTG~Ya~a~~~~-----------~~~~~el~~ 181 (261)
..+.+++..++.. ++.|++-+-|..+.. ....+.+.|+|.|=+|........... ......+..
T Consensus 200 ~~~~~i~~~v~~~~~~pv~vK~~~~~d~~~~~~~~~~~~~~Gvd~i~v~~~~~~~~~~~~~~~~~~g~~g~~~~~~~l~~ 279 (360)
T 3i65_A 200 IMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKF 279 (360)
T ss_dssp CSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHH
T ss_pred CCCCHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 21000000012356785799859998766899999999970656613203533455543324456865776277899999
Q ss_pred HHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHH-H-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999876654156235207898-9877999997369963884259999-9-9999409999999999997
Q gi|254780438|r 182 LAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFA-A-TALECGVKEAVFCFRRACG 247 (261)
Q Consensus 182 i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiI-s-eAl~~GL~~aI~~~~~ii~ 247 (261)
+++..+ +....+-|-+-=|+ +.+-+.+.+. -+-+=|.||-+++ . -.++--+.+-++.+.+...
T Consensus 280 i~~~~~-~~~~~i~ii~~GGI~~~~da~~~l~--~GAd~V~igr~~l~~~p~~~~~i~~eL~~~~~~~g 345 (360)
T 3i65_A 280 ICEMYN-YTNKQIPIIASGGIFSGLDALEKIE--AGASVCQLYSCLVFNGMKSAVQIKRELNHLLYQRG 345 (360)
T ss_dssp HHHHHH-HTTTCSCEEECSSCCSHHHHHHHHH--HTEEEEEESHHHHHHGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-HHCCCCCEEEECCCCCHHHHHHHHH--CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 999999-8289983999789899999999998--49879987288884293899999999999999849
No 76
>>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} (A:)
Probab=74.61 E-value=7.1 Score=20.18 Aligned_cols=194 Identities=12% Similarity=0.054 Sum_probs=109.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 78868998999999997499899982478833488899999887400013674158883485689999985072128971
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLV 98 (261)
...+.++.++.++.+.++|++.|-+..+ ..|- .+...+...+.... ..--.......++++.+..=+.+++-
T Consensus 24 ~~~~~~~~~~~~~~~~~~gv~~i~~~~~--~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ga~~i~~~ 95 (221)
T 1yad_A 24 DDSKPVEELARIIITIQNEVDFIHIRER--SKSA--ADILKLLDLIFEGG----IDKRKLVMNGRVDIALFSTIHRVQLP 95 (221)
T ss_dssp CSCSCHHHHHHHHHHHGGGCSEEEECCT--TSCH--HHHHHHHHHHHHTT----CCGGGEEEESCHHHHHTTTCCEEEEC
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEECCC--CCCH--HHHHHHHHHHHHHH----CCCCEEEEECCHHHHHHCCCCEEEEC
T ss_conf 9976778999999999789999997899--9899--99999999999973----65885898488999986089868843
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
+. .......+....+..+..-+. ++. .+..+.+.|+|.|-+.+.-.... .+....
T Consensus 96 ~~------------------~~~~~~~~~~~~~~~i~~~~~-t~~--e~~~a~~~g~d~v~~~~~~~~~~--~~~~~~-- 150 (221)
T 1yad_A 96 SG------------------SFSPKQIRARFPHLHIGRSVH-SLE--EAVQAEKEDADYVLFGHVFETDC--KKGLEG-- 150 (221)
T ss_dssp TT------------------SCCHHHHHHHCTTCEEEEEEC-SHH--HHHHHHHTTCSEEEEECCC--------------
T ss_pred CC------------------CCCHHHHHHHHHHHHHHHHCC-CHH--HHHHHHHHHHHHHHHCCCCCCCC--CCCHHH--
T ss_conf 76------------------563678899988876543004-399--98889984112410023455444--431024--
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6889998766541562352078989877999997369963884259999999994099999999999974105
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
..+....+.+....+.|-|+=|.|.+|+..+++ -+.+=|-+|=+|.... --.++++++++.+++.++
T Consensus 151 -~~~~~~~~~~~~~~~pi~a~GGi~~~~i~~~~~--~Gadgv~vGs~i~~~~---d~~~~~~~~~~~~~~~~~ 217 (221)
T 1yad_A 151 -RGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQ--AGADGIAVMSGIFSSA---EPLEAARRYSRKLKEMRY 217 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHH--TTCSEEEESHHHHTSS---SHHHHHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH--HCCCEEEEEHHHHCCC---CHHHHHHHHHHHHHHHHH
T ss_conf -568888788862577478647899999999998--2998999739987799---999999999999999876
No 77
>>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} (A:134-273)
Probab=73.57 E-value=7.5 Score=20.01 Aligned_cols=75 Identities=12% Similarity=0.005 Sum_probs=57.8
Q ss_pred HHHHHHHHHCCCEEEEEECCCCC-CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 89999985072128971016555-33357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQ-LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~e-lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
.++.--....++++-+..|.... .|..-|+.. -..+.|..+++..++.|++|+.=.--|. .++.+.+.|.++||=
T Consensus 43 ~~~~~~~~~~~d~iKi~~dg~~~~~~~~~~~~~-~~~e~l~~~v~~a~~~G~~v~~Ha~gd~---a~~~al~ag~~~ieH 118 (140)
T 3feq_A 43 LAVREEIQKGATQIKIMASGGVASPTDPIANTQ-YSEDEIRAIVDEAEAANTYVMAHAYTGR---AIARAVRCGVRTIEH 118 (140)
T ss_dssp HHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBC-SCHHHHHHHHHHHHHTTCCEEEEEEEHH---HHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCHH---HHHHHHHHCCCCCCC
T ss_conf 999997650220222111455332345532100-0156666667777642001222110003---578898724442121
No 78
>>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} (A:)
Probab=73.12 E-value=7.7 Score=19.94 Aligned_cols=180 Identities=12% Similarity=0.041 Sum_probs=105.1
Q ss_pred HHHHHHCCCCEEEE--ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC--------------HHHHHHHHHHCCC
Q ss_conf 99999749989998--2478833488899999887400013674158883485--------------6899999850721
Q gi|254780438|r 30 GKIALQSGASGLTV--HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN--------------ETFLNLCERYKPE 93 (261)
Q Consensus 30 a~~~~~~GadgITv--H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~--------------~e~i~ia~~ikP~ 93 (261)
+..+.++|+|-+=+ -.-+--=-.-..-+..|++.+... ..+..+.-.|. ..+++.+.+..++
T Consensus 14 ~~~~~~~g~d~iDi~d~~~v~~~t~g~~~i~~i~~~~~~~--~~~vh~mir~~~~~~~~~~~~~~~~~~~i~~~~~~Gad 91 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEK--GISVAVXIRPRGGNFVYNDLELRIXEEDILRAVELESD 91 (224)
T ss_dssp GGGCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCC--CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999984999899868766679899989999999874105--88648984158898754888999999999999980998
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC---CCCHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf 289710165553335782213337889999986202696389972544---44147999974066146511211102444
Q gi|254780438|r 94 QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN---GNEHSLQAAKLTGADCIELYTGPYGACYN 170 (261)
Q Consensus 94 qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd---~~q~~i~~a~~~Gad~VElhTG~Ya~a~~ 170 (261)
.+|+-.+. .++-.+. ..+....+.-.+.|+-+..=.+.+ .-...++....+|++.+-.+.|+|...-.
T Consensus 92 ~i~v~~~~-----~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~i~~i~~m~v~~~~~~g~~~~~~~~ 162 (224)
T 2bdq_A 92 ALVLGILT-----SNNHIDT----EAIEQLLPATQGLPLVFHXAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPII 162 (224)
T ss_dssp EEEECCBC-----TTSSBCH----HHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCCGG
T ss_pred EEEEEEEC-----CCCCHHH----HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 45999887-----8776479----99999999729977187058871110207999999997598501444764341299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHH
Q ss_conf 3564336668899987665415623520789898779999973699638842599999
Q gi|254780438|r 171 NPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAA 228 (261)
Q Consensus 171 ~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIs 228 (261)
+.- ..+.++ ......++.+-+|=|+|.+|++.++.+ -..+.+..|-++..
T Consensus 163 ~~~---~~l~~~----~~~~~~~~~I~vdGGI~~~~i~~l~~~-~g~~~vv~Gsai~~ 212 (224)
T 2bdq_A 163 ENI---KHIKAL----VEYANNRIEIXVGGGVTAENYQYICQE-TGVKQAHGTRITQX 212 (224)
T ss_dssp GGH---HHHHHH----HHHHTTSSEEEECSSCCTTTHHHHHHH-HTCCEEEETTCC--
T ss_pred HHH---HHHHHH----HHHCCCCEEEEECCCCCHHHHHHHHHH-HCCEEEEEECCCCC
T ss_conf 999---999999----996399859998699799999999996-59848997022588
No 79
>>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- tRNA synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* (A:1-30,A:456-572)
Probab=72.65 E-value=7.9 Score=19.87 Aligned_cols=64 Identities=13% Similarity=0.054 Sum_probs=45.7
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 8507212897101655533357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 88 ERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 88 ~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
..+.|.||+++|-.. .-....+....+...|++.|++|-+---...--+.+..|..+|+..+=+
T Consensus 41 ~~iAP~qV~Iipi~~---------~~e~~~~~a~~l~~~L~~~gi~v~iDdr~~slgkKi~~a~~~GiP~~iv 104 (147)
T 2j3l_A 41 TGIAPFDLHVVQMNV---------KDEYQTKLSQEVEAMMTEAGYEVLVDDRNERAGVKFADADLIGCPIRIT 104 (147)
T ss_dssp TTTSSCSEEEEESCT---------TCHHHHHHHHHHHHHHHHTTCCEEEECSSCCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCCCEEEEEECCC---------CCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 765894799996478---------8789999999999999978998999899999769999868639988999
No 80
>>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A* (A:)
Probab=71.72 E-value=8.2 Score=19.73 Aligned_cols=200 Identities=10% Similarity=-0.041 Sum_probs=131.4
Q ss_pred CCCCCHHHHHHHHHHCCCC--EEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHHCCCEEEE
Q ss_conf 8689989999999974998--999824788334888999998874000136741588834856-8999998507212897
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGAS--GLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-TFLNLCERYKPEQITL 97 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~Gad--gITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e~i~ia~~ikP~qvtL 97 (261)
.++|++-++.+.+.+.|++ .+.++...-++. ....+..+++... .............. .+.+.+.+...+.+++
T Consensus 13 ~D~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~gad~i~v 89 (218)
T 3jr2_A 13 LDQTNLTDAVAVASNVASYVDVIEVGTILAFAE-GXKAVSTLRHNHP--NHILVCDXKTTDGGAILSRXAFEAGADWITV 89 (218)
T ss_dssp ECCSSHHHHHHHHHHHGGGCSEEEECHHHHHHH-TTHHHHHHHHHCT--TSEEEEEEEECSCHHHHHHHHHHHTCSEEEE
T ss_pred ECCCCHHHHHHHHHHCCCCEEEEEECEECEECC-CHHHHHHHHHCCC--CEEEEEEEEECCCCCCHHHHHHCCCCCEEEE
T ss_conf 648999999999996489701999551330048-9889999985066--5268773210248720244541467718997
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
-.+ .....+....+.+++.+..+.+++-|..+...+..+.++|++.+-+..+-........ ....
T Consensus 90 h~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~~~-~~~~ 154 (218)
T 3jr2_A 90 SAA--------------AHIATIAACKKVADELNGEIQIEIYGNWTXQDAKAWVDLGITQAIYHRSRDAELAGIG-WTTD 154 (218)
T ss_dssp ETT--------------SCHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCC-SCHH
T ss_pred EHH--------------HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCC-CCHH
T ss_conf 231--------------0356799999986532663289814899999999998621151898883036866523-6899
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6688999876654156235207898987799999736996388425999999999409999999999997
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~ 247 (261)
...........+..|-++=|.+.+|+..++ + -+.+=+-+|-+|....= -++++++++++++
T Consensus 155 ----~~~~~~~~~~~~~pv~~~gGi~~~~~~~a~-~-~GAd~vvvGsaI~~a~d---p~~~~~~l~~~~~ 215 (218)
T 3jr2_A 155 ----DLDKXRQLSALGIELSITGGIVPEDIYLFE-G-IKTKTFIAGRALAGAEG---QQTAAALREQIDR 215 (218)
T ss_dssp ----HHHHHHHHHHTTCEEEEESSCCGGGGGGGT-T-SCEEEEEESGGGSHHHH---HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHCCCCEEEECCCCCCCCHHHHH-H-CCCCEEEECCHHCCCCC---HHHHHHHHHHHHH
T ss_conf ----999999975259548864887868899999-8-59899998905428989---9999999999998
No 81
>>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, glycerol complex; 1.30A {Thermus thermophilus HB8} (A:)
Probab=70.59 E-value=8.7 Score=19.56 Aligned_cols=138 Identities=18% Similarity=0.186 Sum_probs=80.3
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCEE--EEECCCCCC----------------------------CCCHHHHHHHHHHHC
Q ss_conf 22078868998999999997499899--982478833----------------------------488899999887400
Q gi|254780438|r 16 RNRRNLPWPNLVHIGKIALQSGASGL--TVHPRPDQR----------------------------HIRYTDLPEIRRLID 65 (261)
Q Consensus 16 RnaRg~~~P~~~~~a~~~~~~GadgI--TvH~R~DrR----------------------------HI~~~Dv~~l~~~~~ 65 (261)
|-+++..-.|=+.+-..|.+.||++| -||+-.|.- ......+..+.+++.
T Consensus 14 RG~~~~~pENT~~af~~A~~~Ga~~iE~DV~lTkDg~~V~~HD~~l~r~t~~~~~i~~~t~~el~~~~~~~i~~~~e~~~ 93 (224)
T 1vd6_A 14 RGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEAFP 93 (224)
T ss_dssp TSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEETTEEGGGSCHHHHHHHSTTCCBHHHHHGGGGTCT
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCCCCCCCCCEECEEHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf 99999997205999999998698989998899468745502664026651000009887321025983878999997478
Q ss_pred CCCCCCEEEEEECC---------------------------CHHHHHHHHHHCCCE--EEEEECCCCCCCCCCCCCHHH-
Q ss_conf 01367415888348---------------------------568999998507212--897101655533357822133-
Q gi|254780438|r 66 EQFPKAELNIEGYP---------------------------NETFLNLCERYKPEQ--ITLVPDDPHQLTSDHGWDFLQ- 115 (261)
Q Consensus 66 ~~~~~~elNiEg~p---------------------------~~e~i~ia~~ikP~q--vtLVPe~r~elTTegGldv~~- 115 (261)
. ...+..... ..+++..+.+..|.. ..+++....+..-..+.+...
T Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 169 (224)
T 1vd6_A 94 Q----AVFNVELKSFPGLGEEAARRLAALLRGREGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSALLPCLGVEAVHP 169 (224)
T ss_dssp T----CEEEEEECCCTTSHHHHHHHHHHHTTTCSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCGGGGGGSCCSEEEE
T ss_pred C----CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCCEEEEC
T ss_conf 6----402110256743027889999998740422431354288899999841467355301445012102022035740
Q ss_pred -HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEE
Q ss_conf -37889999986202696389972544441479999740661465
Q gi|254780438|r 116 -NQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIE 159 (261)
Q Consensus 116 -~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VE 159 (261)
........+..+++.|+.|..+---++++ ++.+.+.|+|.|-
T Consensus 170 ~~~~~~~~~~~~~~~~g~~v~~wtvn~~~~--~~~~~~~Gvd~i~ 212 (224)
T 1vd6_A 170 HHALVTEEAVAGWRKRGLFVVAWTVNEEGE--ARRLLALGLDGLI 212 (224)
T ss_dssp BGGGCCHHHHHHHHHTTCEEEEECCCCHHH--HHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHCCCCEEE
T ss_conf 156766999999998799999989998999--9999975989999
No 82
>>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} (A:)
Probab=69.99 E-value=6.4 Score=20.49 Aligned_cols=190 Identities=13% Similarity=0.035 Sum_probs=94.0
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEE---CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHHCCCEEEE
Q ss_conf 68998999999997499899982---4788334888999998874000136741588834856-8999998507212897
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVH---PRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-TFLNLCERYKPEQITL 97 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH---~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e~i~ia~~ikP~qvtL 97 (261)
..-++..++..|..+|+++++.= +.+..+.-..+....+.+ .....-.++-+..+. +....+.... +.-+.
T Consensus 28 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 102 (265)
T 1wv2_A 28 KYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPP----DRYTILPNTAGCYDAVEAVRTCRLAR-ELLDG 102 (265)
T ss_dssp CSSSHHHHHHHHHHSCCSEEEEEGGGCCC-------------CT----TTSEEEEECTTCCSHHHHHHHHHHHH-TTTTS
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHCC----CCEEECCCHHHHHHHHHHHHHHHHHH-HHHCC
T ss_conf 99999999999998599879999831355668873006765024----78476685899861999999999999-97089
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
+|...... ..+|.-.........+.+.......+.+..-...+++ ....+.+.|+|.|=+|-+.-.......
T Consensus 103 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~--~a~~~~~~g~d~i~v~g~~~gg~~~~~----- 174 (265)
T 1wv2_A 103 HNLVKLEV-LADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPI--IARQLAEIGCIAVMPLAGLIGSGLGIC----- 174 (265)
T ss_dssp CCEEEECC-BSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHH--HHHHHHHSCCSEEEECSSSTTCCCCCS-----
T ss_pred CCEEEEEE-ECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHH--HHHHHHHCCCCEEEECCCHHHHCCCCC-----
T ss_conf 75589754-2575556732888999999997479169995074399--999998669848753435655445747-----
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCC-CCHHHHHHHHHHCCCCEEEEEHHHHHHH
Q ss_conf 668899987665415623520789-8987799999736996388425999999
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHD-LTIQNIPNLINAIPYISEISVGHAFAAT 229 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHg-Ln~~Nl~~~i~~Ip~I~EvsIGHaiIse 229 (261)
.++.+ ...+...++-|-|.=| -+..-+.+.++ -+-+=|.||-+++..
T Consensus 175 ~~~~i---~~i~~~~~ipii~~GGI~~~~dv~kal~--lGAd~V~iGt~~~~~ 222 (265)
T 1wv2_A 175 NPYNL---RIILEEAKVPVLVDAGVGTASDAAIAME--LGCEAVLMNTAIAHA 222 (265)
T ss_dssp CHHHH---HHHHHHCSSCBEEESCCCSHHHHHHHHH--HTCSEEEESHHHHTS
T ss_pred CHHHH---HHHHHCCCCEEEEECCCCCHHHHHHHHH--CCCCEEEECHHHHCC
T ss_conf 87899---9887327832897268898899999997--108999943476627
No 83
>>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} (A:)
Probab=69.60 E-value=9.1 Score=19.42 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=77.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCC-C----CEEEEEECC------CCCCHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf 55533357822133378899999862026-9----638997254------444147999974066146511211102444
Q gi|254780438|r 102 PHQLTSDHGWDFLQNQALLTKTVARLHNL-G----SRISLFADG------NGNEHSLQAAKLTGADCIELYTGPYGACYN 170 (261)
Q Consensus 102 r~elTTegGldv~~~~~~L~~~i~~l~~~-g----irvSLFIDp------d~~q~~i~~a~~~Gad~VElhTG~Ya~a~~ 170 (261)
.+..|-+-|=++.....++.++++.+++. + |++++..+- +....-.+...+.|+|.+.++++.+.....
T Consensus 179 ~n~r~d~yGgsl~nr~r~~~eii~air~~~~~~~~i~~r~~~~~~~~~~~~e~~~~~~~l~~~g~~~i~~~~~~~~~~~~ 258 (338)
T 1z41_A 179 SNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWXKEQGVDLIDCSSGALVHADI 258 (338)
T ss_dssp TCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 43455431036766578899988656551114745886442134787200436999999998498631122123345555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 3564336668899987665415623520-7898987799999736996388425999999999
Q gi|254780438|r 171 NPQQERIFLNKLAITAQLAQKMDLQINA-GHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 171 ~~~~~~~el~~i~~aa~~A~~lgL~VnA-GHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
..... ....+....+.+ .+.-|=+ |---+.+....++++ ...+=|.||-+++++-=+
T Consensus 259 ~~~~~--~~~~~~~~ir~~--~~~pvi~~G~i~~~~~a~~~l~~-g~~D~V~igR~~l~dP~l 316 (338)
T 1z41_A 259 NVFPG--YQVSFAEKIREQ--ADXATGAVGXITDGSXAEEILQN-GRADLIFIGRELLRDPFF 316 (338)
T ss_dssp CCCTT--TTHHHHHHHHHH--HCCEEEECSSCCSHHHHHHHHHT-TSCSEEEECHHHHHCTTH
T ss_pred CCCCC--CCHHHHHHHHHH--CCCEEEEECCCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCHH
T ss_conf 57885--116899999986--69409996893999999999987-995542765998879469
No 84
>>3lmz_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis} (A:)
Probab=69.11 E-value=9.3 Score=19.35 Aligned_cols=207 Identities=12% Similarity=0.030 Sum_probs=130.0
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC-------HHHHHHHHHH
Q ss_conf 078868998999999997499899982478833488899999887400013674158883485-------6899999850
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN-------ETFLNLCERY 90 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~-------~e~i~ia~~i 90 (261)
++.-..-++.+....+.+.|.++|-+.+-...--..+.++..+++.+..+ ++++..-.... .+.++++...
T Consensus 24 ~~~~~~~~l~~~l~~~~~~G~~~iel~~~~~~~~~~~~~~~~~~~~~~~~--gl~~~~~~~~~~~~~~~~~~~i~~a~~l 101 (257)
T 3lmz_A 24 GYTFVNFDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAH--KVTGYAVGPIYXKSEEEIDRAFDYAKRV 101 (257)
T ss_dssp GGGGTTSCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHT--TCEEEEEEEEEECSHHHHHHHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC--CCEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 12268999999999999869998996367778789999999999999861--9889981787455499999999999984
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-----CCCCHHHHHHHHCCCCEEEEC--CC
Q ss_conf 72128971016555333578221333788999998620269638997254-----444147999974066146511--21
Q gi|254780438|r 91 KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG-----NGNEHSLQAAKLTGADCIELY--TG 163 (261)
Q Consensus 91 kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp-----d~~q~~i~~a~~~Gad~VElh--TG 163 (261)
.-+.++.-| ..+.++......++.|+++++=-.+ +...........++.+.+-+. +|
T Consensus 102 g~~~v~~~~----------------~~~~l~~~~~~a~~~gi~l~lEn~~~~~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 165 (257)
T 3lmz_A 102 GVKLIVGVP----------------NYELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKDLDPRIGXCLDVG 165 (257)
T ss_dssp TCSEEEEEE----------------CGGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHTTSCTTEEEEEEHH
T ss_pred CCCEEEECC----------------CHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECH
T ss_conf 979999578----------------8999999999999839999997079845678358899999737899779999743
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEECCC-CCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 110244435643366688999876654156-----------23520789-898779999973699638842599999999
Q gi|254780438|r 164 PYGACYNNPQQERIFLNKLAITAQLAQKMD-----------LQINAGHD-LTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 164 ~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg-----------L~VnAGHg-Ln~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
.+... +......+.++ ..+....- -.+--|+| +++..+-..+....+=--+++=+.--.+.-
T Consensus 166 h~~~~---~~~~~~~~~~~---~~~i~~vHikD~~~~~~~~~~~~~G~G~id~~~i~~~L~~~gy~g~i~~E~~~~~~~~ 239 (257)
T 3lmz_A 166 HDLRN---GCDPVADLKKY---HTRVFDXHIKDVTDSSKAGVGIEIGRGKIDFPALIRXXREVNYTGXCSLEYEKDXKDP 239 (257)
T ss_dssp HHHHT---TCCHHHHHHHH---GGGEEEEEECEESCSSTTCCEECTTSSSCCHHHHHHHHHHTTCCSEEEECCCSSTTSC
T ss_pred HHHHC---CCCHHHHHHHH---CCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCH
T ss_conf 67761---89878999873---6742189983167776788503889956299999999998499779999986899998
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 94099999999999974
Q gi|254780438|r 232 ECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 232 ~~GL~~aI~~~~~ii~~ 248 (261)
.-++.+++.-+++++.+
T Consensus 240 ~~~~~~~~~~l~~~l~~ 256 (257)
T 3lmz_A 240 FLGIAESIGYFKAVSDL 256 (257)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999853
No 85
>>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} (A:58-279)
Probab=68.72 E-value=9.5 Score=19.30 Aligned_cols=112 Identities=18% Similarity=0.250 Sum_probs=64.9
Q ss_pred HHHHHHHHHHCCCCEE--EEECCCCCCCCCHHHHHHHHHHHCCCCCC-CEEEEEECC-----------------CHHHHH
Q ss_conf 8999999997499899--98247883348889999988740001367-415888348-----------------568999
Q gi|254780438|r 26 LVHIGKIALQSGASGL--TVHPRPDQRHIRYTDLPEIRRLIDEQFPK-AELNIEGYP-----------------NETFLN 85 (261)
Q Consensus 26 ~~~~a~~~~~~GadgI--TvH~R~DrRHI~~~Dv~~l~~~~~~~~~~-~elNiEg~p-----------------~~e~i~ 85 (261)
+..+++-..+.|+-++ |+--.+.. --.+=+..+++...+.-.+ .=+.+||-- +.+.++
T Consensus 23 i~~i~~~l~~~GvTs~lpT~vt~~~e--~~~~~l~~~~~~~~~~ga~ilGiHlEGPfis~~~~Gah~~~~i~~p~~~~~~ 100 (222)
T 1yrr_A 23 LEIMQKANEKSGCTNYLPTLITTSDE--LMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD 100 (222)
T ss_dssp HHHHHHHHHHTTEEEEEEEEECCCHH--HHHHHHHHHHHHHHHCTTSBCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCHH--HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCCCCCCHHHHHH
T ss_conf 89999998727830330257778488--9999999999987504652133220356456011023563101231056788
Q ss_pred HHHHHC--CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE-EECCCCCCHHHHHHHHCCCCEE
Q ss_conf 998507--212897101655533357822133378899999862026963899-7254444147999974066146
Q gi|254780438|r 86 LCERYK--PEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL-FADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 86 ia~~ik--P~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL-FIDpd~~q~~i~~a~~~Gad~V 158 (261)
...+.. ...+||-||.++ .+.++.|.+.||++|+ .=+++.+| +..|.+.|+..+
T Consensus 101 ~~~~~~~~i~~iTlAPE~~~-----------------~e~i~~l~~~Gi~vslGHs~A~~e~--~~~a~~~Ga~~~ 157 (222)
T 1yrr_A 101 FLCENADVITKVTLAPEMVP-----------------AEVISKLANAGIVVSAGHSNATLKE--AKAGFRAGITFA 157 (222)
T ss_dssp HHHHTTTTEEEEEECGGGSC-----------------HHHHHHHHHTTCEEEECSCCCCHHH--HHHHHHHTCCEE
T ss_pred HHHHHCCCEEEECCCCCCCH-----------------HHHHHHHHHCCCCCCCCCCCCCHHH--HHHHHHCCCHHH
T ss_conf 77640241001002200010-----------------5678998750344321344456999--999997253133
No 86
>>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, X-RAY diffraction, riken structural genomics/proteomics initiative; 1.80A {Thermus thermophilus} (A:)
Probab=68.44 E-value=9.6 Score=19.26 Aligned_cols=190 Identities=12% Similarity=0.082 Sum_probs=131.3
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf 68998999999997499899982478833488899999887400013674158883485689999985072128971016
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDD 101 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~ 101 (261)
...++.+.+..++++|++.|-+=.......-..+++..++.... .-....-+...+.++..+.....+.+.+..+.
T Consensus 63 ~~~~~~~~~~~~~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~a~~~g~d~v~l~~~~ 138 (254)
T 1vc4_A 63 REVDPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVD----LPLLRKDFVVDPFMLEEARAFGASAALLIVAL 138 (254)
T ss_dssp CSCCHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCC----SCEEEESCCCSHHHHHHHHHTTCSEEEEEHHH
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCC----CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
T ss_conf 66999999999984588679997576634456899999998708----87113775156999989876052389999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH
Q ss_conf 55533357822133378899999862026963899725444414799997406614651121110244435643366688
Q gi|254780438|r 102 PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNK 181 (261)
Q Consensus 102 r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~ 181 (261)
. ...+...+...+..+..+-.-+-.. .....+.+.|+|.|=+.+-..-.. ....... .
T Consensus 139 ~--------------~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~a~~~g~d~i~~~~~~~~~~--~~~~~~~--~- 196 (254)
T 1vc4_A 139 L--------------GELTGAYLEEARRLGLEALVEVHTE---RELEIALEAGAEVLGINNRDLATL--HINLETA--P- 196 (254)
T ss_dssp H--------------GGGHHHHHHHHHHHTCEEEEEECSH---HHHHHHHHHTCSEEEEESBCTTTC--CBCTTHH--H-
T ss_pred H--------------HHHHHHHHHHHHHHCCCEEEEEECH---HHHHHHHCCCCCEEEEECCCHHHH--HCCHHHH--H-
T ss_conf 8--------------7778999999998388226555128---663021158986899952555665--3138889--8-
Q ss_pred HHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998766541562352078989877999997369963884259999999994099999999
Q gi|254780438|r 182 LAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCF 242 (261)
Q Consensus 182 i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~ 242 (261)
.......+...++-|-++=|.+-.+....++ -+.+=|-+|-+|+.- -..+++++++
T Consensus 197 ~~~~~~~~~~~~~pv~~~GGI~~~~~~~~l~--~GAdgV~vGsai~~a---~d~~~~~~~l 252 (254)
T 1vc4_A 197 RLGRLARKRGFGGVLVAESGYSRKEELKALE--GLFDAVLIGTSLMRA---PDLEAALREL 252 (254)
T ss_dssp HHHHHHHHTTCCSEEEEESCCCSHHHHHTTT--TTCSEEEECHHHHTS---SCHHHHHHHH
T ss_pred HHHHHHCCCCCCCEEEECCCCCCHHHHHHHH--CCCCEEEECHHHCCC---CCHHHHHHHH
T ss_conf 8632000257798899846999999999998--699999988364079---9999999984
No 87
>>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} (A:)
Probab=68.17 E-value=9.8 Score=19.22 Aligned_cols=135 Identities=12% Similarity=0.035 Sum_probs=87.4
Q ss_pred CCCCCCCHHHHH----HHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC-----CCHHHHHHHHHHHCCCCCCCE-
Q ss_conf 453322144322----3220788689989999999974998999824788334-----888999998874000136741-
Q gi|254780438|r 3 TSVSVNLNAVAV----LRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRH-----IRYTDLPEIRRLIDEQFPKAE- 72 (261)
Q Consensus 3 t~LsVNidhiAt----LRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRH-----I~~~Dv~~l~~~~~~~~~~~e- 72 (261)
.|+|++...+.+ .-..+....-++.++...+.++|.+||-+|...-.-+ ..+.++..+++.+... +++
T Consensus 8 ~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~G~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Gl~i 85 (386)
T 1muw_A 8 DRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDAT--GMTV 85 (386)
T ss_dssp GCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH--TCBC
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCC
T ss_conf 52468961167768799988889988989999999984998797277766888998677899999999999953--9842
Q ss_pred --EEEEE------------CCC-----------HHHHHHHHHHCCCEEEEEECCCCCCC-----CCCCCCHHHHHHHHHH
Q ss_conf --58883------------485-----------68999998507212897101655533-----3578221333788999
Q gi|254780438|r 73 --LNIEG------------YPN-----------ETFLNLCERYKPEQITLVPDDPHQLT-----SDHGWDFLQNQALLTK 122 (261)
Q Consensus 73 --lNiEg------------~p~-----------~e~i~ia~~ikP~qvtLVPe~r~elT-----TegGldv~~~~~~L~~ 122 (261)
+|-.. .|. .+.++++.....+.+.+.|-.....+ .+..|+. -.+.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~~~~~--~~e~l~~ 163 (386)
T 1muw_A 86 PMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDR--MKEAFDL 163 (386)
T ss_dssp CEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHH--HHHHHHH
T ss_pred CEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHH--HHHHHHH
T ss_conf 04315434685535687889699999999999999999999949996997489887667665799999999--9999999
Q ss_pred HHHHHCCCCCEEEEEECCC
Q ss_conf 9986202696389972544
Q gi|254780438|r 123 TVARLHNLGSRISLFADGN 141 (261)
Q Consensus 123 ~i~~l~~~girvSLFIDpd 141 (261)
+.....+.|+++.+...|-
T Consensus 164 i~~~a~~~g~~~~~e~~~~ 182 (386)
T 1muw_A 164 LGEYVTSQGYDIRFAIEPK 182 (386)
T ss_dssp HHHHHHHHTCCCEEEECCC
T ss_pred HHHHHHHHCCCCEEEECCC
T ss_conf 9999997299957995236
No 88
>>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} (A:)
Probab=68.12 E-value=9.8 Score=19.22 Aligned_cols=187 Identities=11% Similarity=0.000 Sum_probs=106.2
Q ss_pred HHHHHHHHHCCCCEEEEEC-CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-CCCHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 9999999974998999824-78833488899999887400013674158883-485689999985072128971016555
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHP-RPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG-YPNETFLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~-R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg-~p~~e~i~ia~~ikP~qvtLVPe~r~e 104 (261)
.+.+..+.++|||-|=+.. -.-.|+........+...+... .....+=- ++.+.+.+++.+..++.+++--|...
T Consensus 12 ~~~~~~~~~~Gad~lg~~~~d~s~~~~~~~~~~~~~~~~~~~--~~~V~v~v~~~~~~i~~~~~~~~~d~iqlh~~~~~- 88 (205)
T 1nsj_A 12 LEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPF--VFRVGVFVNEEPEKILDVASYVQLNAVQLHGEEPI- 88 (205)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSS--SEEEEEESSCCHHHHHHHHHHHTCSEEEECSCCCH-
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC--CEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCH-
T ss_conf 999999996799989785468999986999999987764467--52899995565776555654158468861674009-
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 33357822133378899999862026963899725444414799997406614651121110244435643366688999
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAI 184 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~ 184 (261)
..+..++. +.++-..+.+... .....+..-++|.|=+.|..-...- ..... .+..
T Consensus 89 -----------------~~~~~l~~-~~~~~~~~~~~~~-~~~~~~~~~~~D~il~~~~~~~~~~--~~~~~-~~~~--- 143 (205)
T 1nsj_A 89 -----------------ELCRKIAE-RILVIKAVGVSNE-RDMERALNYREFPILLDTKTPEYGG--SGKTF-DWSL--- 143 (205)
T ss_dssp -----------------HHHHHHHT-TSEEEEEEEESSH-HHHHHHGGGTTSCEEEEESCSSSSS--CCSCC-CGGG---
T ss_pred -----------------HHHHHHHC-CCCEEEEECCCCH-HHHHHHHHCCCCEEEEECCCCCCCC--CCCCC-CHHH---
T ss_conf -----------------99986531-4540543024788-8899987415526998658998898--76543-5888---
Q ss_pred HHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 8766541562352078989877999997369963884259999999994-099999999999974
Q gi|254780438|r 185 TAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALEC-GVKEAVFCFRRACGQ 248 (261)
Q Consensus 185 aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~-GL~~aI~~~~~ii~~ 248 (261)
..-....+..+-+.=|+|-+|+..++.+.. .+=+.+|=++ +. --.+...+|++++++
T Consensus 144 -~~~~~~~~~pi~~aGGI~~~ni~~~~~a~~-~~~i~v~S~i-----e~~~g~kd~~~i~~~~~~ 201 (205)
T 1nsj_A 144 -ILPYRDRFRYLVLSGGLNPENVRSAIDVVR-PFAVDVSSGV-----EAFPGKKDHDSIKMFIKN 201 (205)
T ss_dssp -TGGGGGGSSCEEEESSCCTTTHHHHHHHHC-CSEEEESGGG-----EEETTEECHHHHHHHHHH
T ss_pred -HHHHHHCCCCEEEECCCCHHHHHHHHHHHC-CCEEEECCCE-----ECCCCCCCHHHHHHHHHH
T ss_conf -755554036446607799789999999778-9999981840-----678996199999999999
No 89
>>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} (A:)
Probab=67.73 E-value=9.9 Score=19.16 Aligned_cols=217 Identities=14% Similarity=0.107 Sum_probs=118.5
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECC-----CCCCCCCHHHHHHHHHHHCCCCCCCEE---EEEE------------CC
Q ss_conf 886899899999999749989998247-----883348889999988740001367415---8883------------48
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPR-----PDQRHIRYTDLPEIRRLIDEQFPKAEL---NIEG------------YP 79 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R-----~DrRHI~~~Dv~~l~~~~~~~~~~~el---NiEg------------~p 79 (261)
.....++.++...+.++|.+||.++.. -+.-.+.+.++..+++.+... ++++ |--. .|
T Consensus 29 ~~~~~~l~~~l~~~~~~G~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gl~i~~~~~~~~~~~~~~~~~~~~~ 106 (387)
T 1bxb_A 29 VRERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDET--GLKVPMVTANLFSDPAFKDGAFTSP 106 (387)
T ss_dssp CSCCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHH--TCBCCEEECCCSSSGGGGGCSTTCS
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCCEEEECCCCCCCHHHHCCCCCCC
T ss_conf 32127899999999844998785166655888898789999999999986406--8730011554345766534653589
Q ss_pred C-----------HHHHHHHHHHCCCEEEEEECC-----CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 5-----------689999985072128971016-----555333578221333788999998620269638997254444
Q gi|254780438|r 80 N-----------ETFLNLCERYKPEQITLVPDD-----PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN 143 (261)
Q Consensus 80 ~-----------~e~i~ia~~ikP~qvtLVPe~-----r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~ 143 (261)
. .+.++++...-.+.+.+.|-. +.+...+..|+. -.+.|+.+.....+.|+++.+...|-+-
T Consensus 107 d~~~r~~~~~~~~~~i~~a~~lG~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~l~~i~~~a~~~g~~~~~e~~~~~~ 184 (387)
T 1bxb_A 107 DPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDW--VREALNFMAAYAEDQGYGYRFALEPKPN 184 (387)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHH--HHHHHHHHHHHHHHHTCCCEEEECCCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 88999999999999999999839996997678776677630579999999--9999999999777518883799940789
Q ss_pred C-----------HHHHHHHH-CCCCEE--EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE------------
Q ss_conf 1-----------47999974-066146--511211102444356433666889998766541562352------------
Q gi|254780438|r 144 E-----------HSLQAAKL-TGADCI--ELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQIN------------ 197 (261)
Q Consensus 144 q-----------~~i~~a~~-~Gad~V--ElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~Vn------------ 197 (261)
. .......+ .+.+.+ -+=||.+... ..... ..+.....+.+-..+.++
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~lD~gH~~~~---g~d~~---~~~~~~~~~~~i~hvh~~~~~~~~~~~~~~ 258 (387)
T 1bxb_A 185 EPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMA---GLNFV---HAVAQALDAGKLFHIDLNDQRMSRFDQDLR 258 (387)
T ss_dssp SSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHHT---TCCHH---HHHHHHHHTTCBCCEECCBCCSSSSCCCBC
T ss_pred CCCCCCCCCCHHHHHHHHHHHCCHHHEEECCCCCHHHHC---CCCHH---HHHHHHHHHCCCCCEECCCCCCCCCCCCCC
T ss_conf 875352158899999999983770217531231345304---87758---899999983964062747877788876677
Q ss_pred ECCCCCHHH---HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 078989877---99999736996388425999999999409999999999997
Q gi|254780438|r 198 AGHDLTIQN---IPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 198 AGHgLn~~N---l~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~ 247 (261)
.|.| ++.+ +...+....+--=+++-++.-...-..++..+.+..++.+.
T Consensus 259 ~G~G-~~~~~~~~~~~l~~~g~~g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 310 (387)
T 1bxb_A 259 FGSE-NLKAAFFLVDLLESSGYQGPRHFDAHALRTEDEEGVWAFARGCMRTYL 310 (387)
T ss_dssp TTSS-CHHHHHHHHHHHHHTTCCSCEECCCCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8874-578888999999854887643422346778862038899999999999
No 90
>>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A* (A:)
Probab=67.02 E-value=10 Score=19.07 Aligned_cols=52 Identities=8% Similarity=-0.036 Sum_probs=31.6
Q ss_pred EEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Q ss_conf 520789898779999973699638842599999999940--99999999999974105655
Q gi|254780438|r 196 INAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECG--VKEAVFCFRRACGQHLDNTM 254 (261)
Q Consensus 196 VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~G--L~~aI~~~~~ii~~~~~~~~ 254 (261)
+-++=|.+++++..++.. +.+=+.+|- ++|.. .++++++|++++++.+....
T Consensus 190 ~~~~gg~~~~~~~~~~~~--Gad~vvvGr-----~I~~a~dp~~~~~~l~~~i~~~~~~~~ 243 (246)
T 2yyu_A 190 DAAHDQVRVVTPRKARAL--GSDYIVIGR-----SLTRAADPLRTYARLQHEWNGGEREST 243 (246)
T ss_dssp -------CCCCHHHHHHH--TCSEEEECH-----HHHTSSSHHHHHHHHHHHCC-------
T ss_pred CCCCCCCCCCCHHHHHHC--CCCEEEECC-----CCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 777782412899999984--999999896-----336899999999999999834777888
No 91
>>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A (A:)
Probab=66.56 E-value=10 Score=19.01 Aligned_cols=83 Identities=10% Similarity=0.152 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCEEEEEEC-------CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC------------
Q ss_conf 8999998507212897101-------655533357822133378899999862026963899725444------------
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPD-------DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG------------ 142 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe-------~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~------------ 142 (261)
.+++++.......++..|- .+...+++-.|+- -.+.|+.+.....+.|+++.+=.++.+
T Consensus 159 ~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~le~~~~~~~~~~~~~~~~t 236 (386)
T 3bdk_A 159 PVADDLNLPGWDSSYSKEEMKAIIENYRQNISEEDLWAN--LEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITG 236 (386)
T ss_dssp C--------------CCHHHHHHHHHHHHTCCHHHHHHH--HHHHHHHHHHHHHSSSCEEEECCCSSSSCCTTCCCCCCS
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEC
T ss_conf 443224799854447765654302202579999999999--999999999999975948998047997564788755311
Q ss_pred CCHHHHHHHHCCCC--EEEECCCCCH
Q ss_conf 41479999740661--4651121110
Q gi|254780438|r 143 NEHSLQAAKLTGAD--CIELYTGPYG 166 (261)
Q Consensus 143 ~q~~i~~a~~~Gad--~VElhTG~Ya 166 (261)
.+...+..+.++.+ .+.+-||.+.
T Consensus 237 ~~~~~~ll~~v~~~~~gl~~D~gh~~ 262 (386)
T 3bdk_A 237 QEAVERFLNLYDSEHNGITMCVGSYA 262 (386)
T ss_dssp HHHHHHHHHTTCSTTEEEEEEHHHHH
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCHH
T ss_conf 99999999846960025897368601
No 92
>>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} (A:165-339)
Probab=65.92 E-value=11 Score=18.93 Aligned_cols=76 Identities=13% Similarity=0.081 Sum_probs=60.1
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCC--HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 999998507212897101655533357822--133378899999862026963899725444414799997406614651
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWD--FLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGld--v~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
.+.--.+.+++++=|.-|.-.+--+..|+. ..-..+.+..++...++.|++|+.=.--+. .++.+.+.|+|+||=
T Consensus 26 ~v~~~~~~g~d~IKi~~dG~~~~~~~~~~~g~~~~s~e~l~~~v~~A~~~G~~v~~Ha~g~~---a~~~al~ag~~~IeH 102 (175)
T 2p9b_A 26 AVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQXSVEQXRAICDEAHQYGVIVGAHAQSPE---GVRRSLLAGVDTIEH 102 (175)
T ss_dssp HHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEECSHH---HHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHH---HHHHHHHHCCCEEEC
T ss_conf 66666543221100101355432223333211111189999888765412430221024415---569999826553411
Q ss_pred C
Q ss_conf 1
Q gi|254780438|r 161 Y 161 (261)
Q Consensus 161 h 161 (261)
-
T Consensus 103 ~ 103 (175)
T 2p9b_A 103 G 103 (175)
T ss_dssp C
T ss_pred C
T ss_conf 3
No 93
>>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural genomics, protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} (A:137-268)
Probab=65.88 E-value=11 Score=18.92 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=58.0
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 999998507212897101655533357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
.+.--.+..++++-+.-|..-.--+.......-..+.+..+++..++.|.+|..=.--+ ..++.+.+.|+|+||=
T Consensus 35 ~v~~~~~~g~d~IKi~~dg~~~~~~~~~~~~~~~~e~l~~iv~~A~~~G~~v~~H~~~~---~~~~~al~ag~~~i~H 109 (132)
T 3be7_A 35 MVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGL---IGIKAAIKAGVDSVEH 109 (132)
T ss_dssp HHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSH---HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHCCCCHHH
T ss_conf 98876654321100012455332345431111457777788888765432211100010---1346787615540110
No 94
>>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} (A:)
Probab=65.63 E-value=11 Score=18.89 Aligned_cols=147 Identities=12% Similarity=0.071 Sum_probs=74.6
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 99999749989998247883348889999988740001367415888348568999998507212897101655533357
Q gi|254780438|r 30 GKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQLTSDH 109 (261)
Q Consensus 30 a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTeg 109 (261)
.....++|||.+++|.-+-|+.- ..+..+...... ...+.++|-....+. ..+....++++..+|-.+.. +..
T Consensus 78 ~~~l~~~Gad~v~l~~~~~~~~~--~~~~~~~~~~~~--~gl~~~~~v~~~~e~-~~~~~~~~~~i~~~~~~~~~--~g~ 150 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKL--NDLARLVAKAKS--LGLDVVVCAPDPRTS-LAAAALGPHAVAVEPPELIG--TGR 150 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBH--HHHHHHHHHHHH--TTCEEEEEESSHHHH-HHHHHTCCSEEEECCGGGTT--TSC
T ss_pred HHHHHCCCCCEEEEECHHHHHHH--HHHHHHHHHHHH--CCCEEEEECCCCHHH-HHHHCCCCCEEEECCHHHCC--CCC
T ss_conf 88851014646995033555641--015899999998--699899986860787-76403688279860511114--787
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8221333788999998620269638997254444-147999974066146511211102444356433666889998766
Q gi|254780438|r 110 GWDFLQNQALLTKTVARLHNLGSRISLFADGNGN-EHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQL 188 (261)
Q Consensus 110 Gldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~-q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~ 188 (261)
.............++.+++.+-.+-+..+-... ..+++.+.+.|+|.+=+-|.-+.. ......++.++++.+.
T Consensus 151 -~~~~~~~~~~~~~~~~~~~~~~~~~ii~~gGi~~~~~~~~~~~~Gadg~viGsai~~~-----~d~~~~i~~l~~a~~~ 224 (226)
T 1w0m_A 151 -AVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA-----KDPYAKIVELAKPLSE 224 (226)
T ss_dssp -CHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC-----SSHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEHHHHCC-----CCHHHHHHHHHHHHHH
T ss_conf -8985888999877654203578803999547577679999851899589963211168-----8989999999999984
Q ss_pred H
Q ss_conf 5
Q gi|254780438|r 189 A 189 (261)
Q Consensus 189 A 189 (261)
+
T Consensus 225 ~ 225 (226)
T 1w0m_A 225 L 225 (226)
T ss_dssp C
T ss_pred C
T ss_conf 2
No 95
>>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} (A:1-199)
Probab=65.58 E-value=11 Score=18.88 Aligned_cols=176 Identities=18% Similarity=0.175 Sum_probs=107.5
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECC-------CCCCCC----CHHHHHHHHHHHCCCCCCCEEEEEECCC--HHHHHHHH
Q ss_conf 6899899999999749989998247-------883348----8899999887400013674158883485--68999998
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPR-------PDQRHI----RYTDLPEIRRLIDEQFPKAELNIEGYPN--ETFLNLCE 88 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R-------~DrRHI----~~~Dv~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia~ 88 (261)
|.-|+-+.-+.....+.+|+|--|- +|..-+ ..+++.++.+.. +.++-+|..|+ ++|++-+.
T Consensus 6 Dtad~~~i~~~~~~~~~~GvTTNP~li~ka~~~~~~~~~~~~~~~~~~~~~~~~-----~g~vs~qv~~~d~e~~i~~a~ 80 (199)
T 1wx0_A 6 DTASLEEIREIAAWGVLSGVTTNPTLVAKAFAAKGEALTEEAFAAHLRAICETV-----GGPVSAEVTALEAEAMVAEGR 80 (199)
T ss_dssp ECCCHHHHHHHHHHTCCCEEECCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH-----TSCEEEECCCSSHHHHHHHHH
T ss_pred ECCCHHHHHHHHCCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHH
T ss_conf 769999999986379967181389999970899546788999999999997412-----687689985283788999999
Q ss_pred H---HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 5---0721289710165553335782213337889999986202696389972544441479999740661465112111
Q gi|254780438|r 89 R---YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 89 ~---ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
+ ..|+.+-=+|-.. -|+ +.++.|...||+|.+=.==..+| .-+|.+.|++.|-.|-|..
T Consensus 81 ~l~~~~~n~~IKIP~T~------~G~----------~A~~~L~~~GI~vn~T~vfs~~Q--a~~aa~Aga~~ispyvgRi 142 (199)
T 1wx0_A 81 RLAAIHPNIVVKLPTTE------EGL----------KACKRLSAEGIKVNMTLIFSANQ--ALLAARAGASYVSPFLGRV 142 (199)
T ss_dssp HHHHHCTTEEEEEESSH------HHH----------HHHHHHHHTTCCEEEEEECSHHH--HHHHHHTTCSEEEEBHHHH
T ss_pred HHHHHCCCEEEEECCCH------HHH----------HHHHHHHHCCCCCEEEEECCHHH--HHHHHHCCCCEEEEECCHH
T ss_conf 99853766499823457------676----------99986642499723777368999--9999983996999740012
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 0244435643366688999876654156235207898987799999736996388425999
Q gi|254780438|r 166 GACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 166 a~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
.+.+.++.+.-.++.++ .+ .+...-+|-+.-==|-+.+... ..-+.+-+-|+..+
T Consensus 143 ~~~~~~g~~~i~~~~~~---~~-~~~~~tkil~AS~r~~~~i~~~--~~~G~d~vTi~~~l 197 (199)
T 1wx0_A 143 DDISWDGGELLREIVEM---IQ-VQDLPVKVIAASIRHPRHVTEA--ALLGADIATMPHAV 197 (199)
T ss_dssp HHTTSCHHHHHHHHHHH---HH-HTTCSCEEEEBCCCSHHHHHHH--HHTTCSEEEECHHH
T ss_pred HHCCCCCHHHHHHHHHH---HH-HCCCCCCEEEECCCCHHHHHHH--HHCCCCEEECCHHH
T ss_conf 20246847799999999---98-3188731575045999999999--98699999829999
No 96
>>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4S cluster; HET: SAM; 2.07A {Escherichia coli} (A:1-364)
Probab=65.08 E-value=7.2 Score=20.14 Aligned_cols=91 Identities=12% Similarity=0.123 Sum_probs=57.6
Q ss_pred CEEEEEECC---CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-EEEEEE---CCCCC
Q ss_conf 415888348---56899999850721289710165553335782213337889999986202696-389972---54444
Q gi|254780438|r 71 AELNIEGYP---NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGS-RISLFA---DGNGN 143 (261)
Q Consensus 71 ~elNiEg~p---~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~gi-rvSLFI---Dpd~~ 143 (261)
..++++.++ ++++++...+..-.++++=+|.-++-+-+. .+-....+.....++.+++.|+ .++.++ -|+-+
T Consensus 140 ~~~~~~~~~~~~~~e~~~~l~~~G~~~i~ig~es~~~~~~~~-~~k~~~~~~~~~~i~~~~~~g~~~v~~~~i~g~p~et 218 (364)
T 1olt_A 140 AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRL-VNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT 218 (364)
T ss_dssp EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHH-HTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTTCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHH-HHCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCH
T ss_conf 214798349987277899997379987998368686788866-4066878999999999998425534034047799842
Q ss_pred C----HHHHHHHHCCCCEEEECC
Q ss_conf 1----479999740661465112
Q gi|254780438|r 144 E----HSLQAAKLTGADCIELYT 162 (261)
Q Consensus 144 q----~~i~~a~~~Gad~VElhT 162 (261)
. ..++.+++++++.+-++.
T Consensus 219 ~~~~~~~l~~~~~~~~~~~~i~~ 241 (364)
T 1olt_A 219 PESFAFTLKRVAELNPDRLSVFN 241 (364)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 67789999999840898334431
No 97
>>1a53_A IGPS, indole-3-glycerolphosphate synthase; thermostable, TIM-barrel; HET: IGP; 2.00A {Sulfolobus solfataricus} (A:25-247)
Probab=64.39 E-value=11 Score=18.74 Aligned_cols=179 Identities=12% Similarity=0.074 Sum_probs=127.7
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC-CHHHHHHHHHHCCCEEEE
Q ss_conf 7886899899999999749989998247883348889999988740001367415888348-568999998507212897
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP-NETFLNLCERYKPEQITL 97 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-~~e~i~ia~~ikP~qvtL 97 (261)
..+...+..+.+..++++|++++.+=-.....--...++..+++.+ +.++.+=... +.+.++.+.....+.+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~i~~i~~~~-----~~p~~~~~~i~~~~~~~~~~~~g~~~~~~ 107 (223)
T 1a53_A 33 SGLDVERDPIEYSKFMERYAVGLSILTEEKYFNGSYETLRKIASSV-----SIPILMKDFIVKESQIDDAYNLGADTVLL 107 (223)
T ss_dssp TSCBCCCCHHHHHHHHTTTCSEEEEECCCTTTCCCHHHHHHHHHHC-----CSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCC-----CCCEEECCCCCCHHHHHHHHHCCCCHHHH
T ss_conf 9887656879999999719857898516653113315788885036-----77602001006767999998615455567
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
=- .......+...++..+..+..+-..+.+.. ....+.++|+|.|=++.+......... .
T Consensus 108 ~~-------------~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~---~a~~a~~~g~d~i~~~~~~~~~~~~~~--~-- 167 (223)
T 1a53_A 108 IV-------------KILTERELESLLEYARSYGMEPLIEINDEN---DLDIALRIGARFIGINSRDLETLEINK--E-- 167 (223)
T ss_dssp EG-------------GGSCHHHHHHHHHHHHTTTCCCEEEECSHH---HHHHHHHTTCSEEEEESBCTTTCCBCH--H--
T ss_pred HH-------------HHCCHHHHHHHHHHHHHHHHHHHHHCCCHH---HHHHHHHCCCCEEEEECCCHHHHHHHH--H--
T ss_conf 68-------------630078889999999998646777258999---999998168570545246767655435--6--
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHH
Q ss_conf 6688999876654156235207898-98779999973699638842599999
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAA 228 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIs 228 (261)
............+-|=|+=|. +.+++..++. -+-+=|-||-+|+.
T Consensus 168 ----~~~~~~~~~~~~vpvia~GGI~~~~dv~~al~--~GAdgV~vGs~i~~ 213 (223)
T 1a53_A 168 ----NQRKLISMIPSNVVKVAESGISERNEIEELRK--LGVNAFLIGSSLMR 213 (223)
T ss_dssp ----HHHHHHHHSCTTSEEEEESCCCCHHHHHHHHH--TTCCEEEECHHHHH
T ss_pred ----HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH--CCCCEEEECHHHCC
T ss_conf ----89999852888986999638999999999997--79999998988768
No 98
>>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A (A:)
Probab=64.28 E-value=12 Score=18.72 Aligned_cols=203 Identities=11% Similarity=0.033 Sum_probs=127.6
Q ss_pred CCCCCHHHHHHHHHHCC--CCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE---CC-CHHHHHHHHHHCCCE
Q ss_conf 86899899999999749--9899982478833488899999887400013674158883---48-568999998507212
Q gi|254780438|r 21 LPWPNLVHIGKIALQSG--ASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG---YP-NETFLNLCERYKPEQ 94 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~G--adgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg---~p-~~e~i~ia~~ikP~q 94 (261)
.++|++-++.+.+.+.| +|.+-+|..+-+. .....+..++... ....-+.. .. ...+++.+.+...+.
T Consensus 12 ~D~~~~~~~l~~~~~~~~~id~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~gad~ 85 (221)
T 3exr_A 12 LDHSNLKGAITAAVSVGNEVDVIEAGTVCLLQ-VGSELVEVLRSLF-----PDKIIVADTKCADAGGTVAKNNAVRGADW 85 (221)
T ss_dssp ECCSSHHHHHHHHHHHGGGCSEEEECHHHHHH-HCTHHHHHHHHHC-----TTSEEEEEEEECSCHHHHHHHHHTTTCSE
T ss_pred ECCCCHHHHHHHHHHCCCCCEEEEECEECCCC-CCHHHHHHHHHHC-----CCEEEEEEEEEECCCHHHHHHHHHCCCCE
T ss_conf 76799999999999618971399825251037-8905899998747-----86058898788428347888776325779
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 89710165553335782213337889999986202696389972544441479999740661465112111024443564
Q gi|254780438|r 95 ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 95 vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
+++-.+.. ..........++..++.|...-+++.+......+..+.+.+.+.+=+....-.-. .....
T Consensus 86 ~~vh~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~ 153 (221)
T 3exr_A 86 MTCICSAT-----------IPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALL-AGETW 153 (221)
T ss_dssp EEEETTSC-----------HHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHH-HTCCC
T ss_pred EEECCCCC-----------HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHEEEEECCCCCC-CCCCC
T ss_conf 99722344-----------1567999999876521462678860245358899998731301212132223566-66777
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3366688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
...++.+ .+........|-++=|.+.+|+..++ + -+.+=+-+|-+|... --..+++++|++.+++.+
T Consensus 154 ~~~~~~~----~~~~~~~~~~i~~~Gg~~~~~~~~~~-~-~Gad~vvvG~aI~~a---~dp~~~~~~~~~~i~~~~ 220 (221)
T 3exr_A 154 GEKDLNK----VKKLIEMGFRVSVTGGLSVDTLKLFE-G-VDVFTFIAGRGITEA---KNPAGAARAFKDEIKRIW 220 (221)
T ss_dssp CHHHHHH----HHHHHHHTCEEEEESSCCGGGGGGGT-T-CCCSEEEECHHHHTS---SSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHH----HHHHHCCCCEEEECCCCCCCCHHHHH-H-CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHH
T ss_conf 9899999----99863569608756985814799999-8-699999988266079---999999999999999974
No 99
>>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA synthetase; 2.75A {Thermus thermophilus} (A:376-505)
Probab=64.26 E-value=12 Score=18.72 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=48.0
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEE
Q ss_conf 85072128971016555333578221333788999998620269638997254444147999974066146
Q gi|254780438|r 88 ERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 88 ~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~V 158 (261)
..+.|.||++||-.... ......-..+...|++.|++|-+...+..-.+.+..|...|+..+
T Consensus 19 ~~laP~qv~iv~i~~~~---------~~~~~~a~~l~~~Lr~~g~~v~~d~~~~~~gkk~k~A~~~g~p~~ 80 (130)
T 1ati_A 19 PQLAPIKVAVIPLVKNR---------PEITEYAKRLKARLLALGLGRVLYEDTGNIGKAYRRHDEVGTPFA 80 (130)
T ss_dssp GGGCSCSEEEEESCSSC---------HHHHHHHHHHHHHHHTTCSSCEEECCCSCHHHHHHHHHHTTCSEE
T ss_pred CCCCCEEEEEEECCCCC---------HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEE
T ss_conf 77686258999667886---------889999999999999789948998899997899886276089989
No 100
>>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein structure initiative; 2.90A {Enterococcus faecalis V583} (A:)
Probab=64.23 E-value=5.4 Score=20.98 Aligned_cols=81 Identities=9% Similarity=0.066 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCC--CCCCHHHHHHHHHHHCCCCCCCEEE-EEECCC------------------HH
Q ss_conf 99899999999749989998247883--3488899999887400013674158-883485------------------68
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQ--RHIRYTDLPEIRRLIDEQFPKAELN-IEGYPN------------------ET 82 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~Dr--RHI~~~Dv~~l~~~~~~~~~~~elN-iEg~p~------------------~e 82 (261)
|+++....+-.-+||.||...|..-- .=-.++++..++..+... ...+. +|..|. ++
T Consensus 22 ~~~~~~~~~~q~~g~~~~~~~~~~~~~g~~w~~~~~~~~~~~~~~~--gl~~~~ie~~~~~~~~k~~~~~~~~~~~~~~~ 99 (367)
T 1tz9_A 22 GDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQE--GLALLGIESVAIHDAIKAGTDQRDHYIDNYRQ 99 (367)
T ss_dssp TCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHT--TCEEEEECSCCCCHHHHHTCSTHHHHHHHHHH
T ss_pred CCCCCHHHHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCCHHHHHCCCHHHHHHHHHHHH
T ss_conf 9962789874526985355526689999957999999999999985--99799971899679987288039999999999
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf 999998507212897101655533
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLT 106 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elT 106 (261)
+++.+.+.--+.||+.+......+
T Consensus 100 ~i~~~~~~G~~~ie~~~~~~~~~~ 123 (367)
T 1tz9_A 100 TLRNLGKCGISLVCYSFKPIFGWA 123 (367)
T ss_dssp HHHHHHHTTCCEEEECCCSSCSCC
T ss_pred HHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 999999779987999705566755
No 101
>>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} (A:295-401)
Probab=63.84 E-value=12 Score=18.67 Aligned_cols=59 Identities=12% Similarity=0.176 Sum_probs=45.0
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 07212897101655533357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
+.|.||++||=..+ .......+...|++.|++|-+-.....-.+.++.|...|+..+=+
T Consensus 2 laP~~v~i~~~~~~------------~~~~a~~i~~~Lr~~gi~v~~d~~~~~l~~~lk~a~~~g~~~~ii 60 (107)
T 1evl_A 2 LAPVQVVIMNITDS------------QSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLV 60 (107)
T ss_dssp TCSSCEEEEESSGG------------GHHHHHHHHHHHHHTTCCEEEECCSSCHHHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEECCCCHH------------HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 38737884379868------------999999999999978998999899999899999999769999999
No 102
>>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, zinc, mRNA, aminoacylation, translational regulation, protein/RNA, ligase/RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} (A:536-642)
Probab=63.84 E-value=12 Score=18.67 Aligned_cols=59 Identities=12% Similarity=0.178 Sum_probs=45.3
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 07212897101655533357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
+.|.||++||=.. ........+...|++.|++|-+-.....-.+.++.|...|+..+=+
T Consensus 2 laP~~v~i~~~~~------------~~~~~a~~i~~~Lr~~gi~v~~d~~~~~l~~~lk~a~~~g~~~~ii 60 (107)
T 1qf6_A 2 LAPVQVVIMNITD------------SQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLV 60 (107)
T ss_dssp TCSSCEEEEESSH------------HHHHHHHHHHHHHHTTTCCEEEECCSSCHHHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEECCC------------HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 5873499997280------------2899999999999988998999899999629999998669989999
No 103
>>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} (A:1-111,A:154-364)
Probab=62.65 E-value=12 Score=18.52 Aligned_cols=122 Identities=14% Similarity=0.105 Sum_probs=61.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCC------CCEEEEEECCCC-------CCHHHHHHHHCC---CCEEEECCCC
Q ss_conf 655533357822133378899999862026------963899725444-------414799997406---6146511211
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNL------GSRISLFADGNG-------NEHSLQAAKLTG---ADCIELYTGP 164 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~------girvSLFIDpd~-------~q~~i~~a~~~G---ad~VElhTG~ 164 (261)
..+..|-+.|=.+.+...++.++|+.+++. ++|+|++.+-+. -+..+..+.+.| .+.+...++.
T Consensus 153 ~~n~r~d~yGgsl~nr~r~~~eiI~avr~~~~~~pV~vKi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 232 (322)
T 1vyr_A 153 SSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETD 232 (322)
T ss_dssp TTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 66666654464211333767888887665404676530202323422200025517899999998774297374123376
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 10244435643366688999876654156235207898987799999736996388425999999999
Q gi|254780438|r 165 YGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 165 Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
+..- +. ......++ ..+.... -+-.|--.+.+.....++. ..++=|.||-.++++--+
T Consensus 233 ~~~~---~~-~~~~~~~~----~~~~~~p-vi~~GgI~~~e~a~~~l~~-g~~D~V~igR~~ladP~l 290 (322)
T 1vyr_A 233 LAGG---KP-YSEAFRQK----VRERFHG-VIIGAGAYTAEKAEDLIGK-GLIDAVAFGRDYIANPDL 290 (322)
T ss_dssp TTBC---CC-CCHHHHHH----HHHHCCS-EEEEESSCCHHHHHHHHHT-TSCSEEEESHHHHHCTTH
T ss_pred CCCC---CC-CCHHHHHH----HHHHCCC-EEEECCCCCHHHHHHHHHC-CCCCEEHHHHHHHHCCHH
T ss_conf 3357---66-44888998----8986584-4996689999999999987-997457455999879489
No 104
>>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, dahps, DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus} (A:)
Probab=62.33 E-value=7.1 Score=20.16 Aligned_cols=118 Identities=13% Similarity=0.023 Sum_probs=58.4
Q ss_pred HHHHHHHHHHCCCCEEEEECCC------CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 8999999997499899982478------8334888999998874000136741588834856899999850721289710
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP------DQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVP 99 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~------DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVP 99 (261)
..+.+..+.++||+.+-.-.+. ..+.--.++...|.+.+.+. ++++-.+..-. +-++++.+..|-.- |
T Consensus 39 a~~~i~~a~~~ga~~vkfq~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--Gi~~~~t~~d~-~~~~~l~~~~~~~k--I- 112 (262)
T 1zco_A 39 IMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDT-RHVELVAKYSDILQ--I- 112 (262)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCG-GGHHHHHHHCSEEE--E-
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CEEEEEEECCH-HHHHHHCCEEEEEE--E-
T ss_conf 999999999840311146434565664435565117899999877531--51146663517-65543246558999--5-
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE----EECCCCCCHHHHHHHHCCCC---EEEECCC
Q ss_conf 1655533357822133378899999862026963899----72544441479999740661---4651121
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL----FADGNGNEHSLQAAKLTGAD---CIELYTG 163 (261)
Q Consensus 100 e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL----FIDpd~~q~~i~~a~~~Gad---~VElhTG 163 (261)
|.-++ .|. +.++.+-+.|..|-| +.+++--...++.....|.. .+++|.-
T Consensus 113 ---------~S~~~-~n~----~lL~~~a~~~kPvil~s~g~~~~~e~~~a~~~i~~~Gn~~~~l~l~hc~ 169 (262)
T 1zco_A 113 ---------GARNS-QNF----ELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIR 169 (262)
T ss_dssp ---------CGGGT-TCH----HHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred ---------CHHHC-CCH----HHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf ---------51430-227----9999875168608985553202666664555752269744799971411
No 105
>>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} (A:60-117)
Probab=60.95 E-value=11 Score=18.88 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHCCCCCEE---------EEEECCCCCCHHHHHHHHCCCCEEEECCC
Q ss_conf 3788999998620269638---------99725444414799997406614651121
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRI---------SLFADGNGNEHSLQAAKLTGADCIELYTG 163 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girv---------SLFIDpd~~q~~i~~a~~~Gad~VElhTG 163 (261)
....+....++|++.|+.+ |+|+- ||+- ..|||+||
T Consensus 14 ~~~~~~~~~~~L~~~gv~~~~~~~~~~~siYf~-DPdG-----------~~iEl~tg 58 (58)
T 1npb_A 14 AEEDFEPLSQRLEQAGVTIWKQNKSEGASFYFL-DPDG-----------HKLELHVG 58 (58)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCSSSEEEEEE-CTTC-----------CEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEE-CCCC-----------CEEEEEEC
T ss_conf 387799999999988982885589983899999-8999-----------98999989
No 106
>>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482} (A:1-345)
Probab=60.58 E-value=12 Score=18.53 Aligned_cols=29 Identities=10% Similarity=-0.080 Sum_probs=23.7
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 86899899999999749989998247883
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPRPDQ 49 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R~Dr 49 (261)
...-|+-+.+..+.++|+..|+++.|...
T Consensus 56 p~~fd~~~~v~~~k~aG~~~vvl~~khh~ 84 (345)
T 3gza_A 56 PTELNTDQWVQAAKAAGCKFAVLTATHET 84 (345)
T ss_dssp CTTCCHHHHHHHHHTTTCSEEEEESCCSS
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 43189999999999859978997020068
No 107
>>3c4u_A Fructose-bisphosphate aldolase; FBP aldolase, class II, zinc, glycolysis, lyase, metal- binding; 1.83A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* (A:)
Probab=60.25 E-value=14 Score=18.24 Aligned_cols=187 Identities=10% Similarity=0.060 Sum_probs=121.0
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH-HHHHHHCCCC-CCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 99999999749989998247883348889999-9887400013-674158883485689999985072128971016555
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPDQRHIRYTDLP-EIRRLIDEQF-PKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~-~l~~~~~~~~-~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~e 104 (261)
.....-|++.++.-|--.-+--.++.....+. .+........ -.+=+++-=..+.+.+.-+++.-=+.|-+=-
T Consensus 31 ~avi~AAe~~~sPvIlq~~~~~~~~~~~~~~~~~~~~~~a~~~~VPV~lHlDHg~~~e~i~~ai~~GftSVMiDg----- 105 (307)
T 3c4u_A 31 NAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDA----- 105 (307)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHHTCSEEEECC-----
T ss_pred HHHHHHHHHHCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECC-----
T ss_conf 999999999699989992760786789899999999999746898199854677789999999857986488618-----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEE--------------------EEEECCCCCCHHHHHHHHCCCCEEEECCCC
Q ss_conf 333578221333788999998620269638--------------------997254444147999974066146511211
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRI--------------------SLFADGNGNEHSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girv--------------------SLFIDpd~~q~~i~~a~~~Gad~VElhTG~ 164 (261)
--+++..|-..-+++++..+..|+-| |+|- ||+| ..+..+++|+|++=+=-|.
T Consensus 106 ----S~lp~eeNi~~T~evv~~ah~~gv~VEaElG~igg~ed~~~~~~~~~~~T--~pe~-a~~Fv~~TgvD~LAvaiGt 178 (307)
T 3c4u_A 106 ----SHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLV--NPKE-AEQFVKESQVDYLAPAIGT 178 (307)
T ss_dssp ----TTSCHHHHHHHHHHHHHHHHHTTCEEEEEECC---------------CCC--CHHH-HHHHHHHHCCSEEEECSSC
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCC--CHHH-HHHHHHHCCCCEEHHHHCC
T ss_conf ----85678999999999999999759867886435202577767666200037--9899-9999973287633444333
Q ss_pred CHHHHHHH---HHHHHHHHHHHHHH-----------------HHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHH
Q ss_conf 10244435---64336668899987-----------------66541562352078989877999997369963884259
Q gi|254780438|r 165 YGACYNNP---QQERIFLNKLAITA-----------------QLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGH 224 (261)
Q Consensus 165 Ya~a~~~~---~~~~~el~~i~~aa-----------------~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGH 224 (261)
---.|..+ +-.-.-|++|+++. ...+..|+-.|-|+|+.-+.+...++ -+|.-+||+-
T Consensus 179 ~HG~Yk~~~~p~l~~~~L~eI~~~~~~PLVLHG~S~~~~~~~~~~~~~~~v~hG~sG~~~e~~~~ai~--~Gi~KiNi~T 256 (307)
T 3c4u_A 179 SHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVK--GGINKVNTDT 256 (307)
T ss_dssp CCGGGCCSSCCCCCHHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCCCCCHHHHHHHHH--HTEEEEEECH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH--CCCEEEEECH
T ss_conf 12455667644447999999872479876257777660778887640475567888999999999997--7946999787
Q ss_pred HHH
Q ss_conf 999
Q gi|254780438|r 225 AFA 227 (261)
Q Consensus 225 aiI 227 (261)
.+-
T Consensus 257 ~l~ 259 (307)
T 3c4u_A 257 DLR 259 (307)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 889
No 108
>>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} (A:)
Probab=60.01 E-value=8.7 Score=19.57 Aligned_cols=184 Identities=13% Similarity=0.109 Sum_probs=108.2
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCC--CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHHCCCEEEEEE
Q ss_conf 89989999999974998999824788--334888999998874000136741588834856-899999850721289710
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPD--QRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-TFLNLCERYKPEQITLVP 99 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~D--rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e~i~ia~~ikP~qvtLVP 99 (261)
+=++...++.-.+.|++-+.+++.+. -+.+.-.++..+.+.. .....+.+.... +....+..-.=..+.
T Consensus 31 ~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~id~n~~cp~~~~~~~~--- 102 (244)
T 1vzw_A 31 YGSPLEAALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQAM-----DIKVELSGGIRDDDTLAAALATGCTRVN--- 102 (244)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHHC-----SSEEEEESSCCSHHHHHHHHHTTCSEEE---
T ss_pred CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC-----CCCEEECCCCCCHHHHHHCCCCCCCCCH---
T ss_conf 58989999999986998799984014457650188898877642-----7744321420330221100002653105---
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEE--------ECCCCC--CHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 1655533357822133378899999862026-9638997--------254444--1479999740661465112111024
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRISLF--------ADGNGN--EHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 100 e~r~elTTegGldv~~~~~~L~~~i~~l~~~-girvSLF--------IDpd~~--q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
.|--+.++.+.+.++++.+++. ...++.- .+++.. ...++...+.|++.+-+|.-.=...
T Consensus 103 ---------~Gs~ll~~p~~~~~i~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~v~~~~~~~~ 173 (244)
T 1vzw_A 103 ---------LGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGT 173 (244)
T ss_dssp ---------ECHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-----
T ss_pred ---------HHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCEECCCCCCCHHHHHHHCCCCEEEEEECCCCCC
T ss_conf ---------67888741001122221566135542022115762465320223220023566540550578752014552
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHH-HCCCCEEEEEHHHHHHHHH
Q ss_conf 4435643366688999876654156235207898-9877999997-3699638842599999999
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLIN-AIPYISEISVGHAFAATAL 231 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~-~Ip~I~EvsIGHaiIseAl 231 (261)
+ .+. .++.+ .+.+....+-|-|+=|. +++-+..+.. .-..++=|.||-++..+-.
T Consensus 174 ~-~g~----~~~~i---~~i~~~~~~pvi~nGgI~s~~d~~~l~~l~~~G~dgVmigra~~~~p~ 230 (244)
T 1vzw_A 174 L-QGP----NLELL---KNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAF 230 (244)
T ss_dssp ---CC----CHHHH---HHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSS
T ss_pred C-CCC----CHHHH---HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEHHHHHCCCC
T ss_conf 2-466----17778---888752898889989999999999997641479316656589887998
No 109
>>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} (A:)
Probab=59.44 E-value=14 Score=18.15 Aligned_cols=21 Identities=10% Similarity=-0.093 Sum_probs=9.2
Q ss_pred EEECCCCCCCCCHHHHHHHHH
Q ss_conf 982478833488899999887
Q gi|254780438|r 42 TVHPRPDQRHIRYTDLPEIRR 62 (261)
Q Consensus 42 TvH~R~DrRHI~~~Dv~~l~~ 62 (261)
+.|.+-...++.++|+..+++
T Consensus 43 ~~~~~~~~~~~~~~~~~~l~~ 63 (353)
T 3l55_A 43 TYETFWGQPETTQDXXTFLXQ 63 (353)
T ss_dssp HHHTTTSCCCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHH
T ss_conf 777667987055999999998
No 110
>>1d3g_A Dihydroorotate dehydrogenase; protein-antiproliferative agent complex, oxidoreductase; HET: BRE FMN ORO DDQ; 1.60A {Homo sapiens} (A:)
Probab=58.69 E-value=14 Score=18.07 Aligned_cols=140 Identities=9% Similarity=-0.029 Sum_probs=80.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCC----CHHHHHHHHCCCCEEEECCCCCHHHHHHHHH------
Q ss_conf 3357822133378899999862026-9638997254444----1479999740661465112111024443564------
Q gi|254780438|r 106 TSDHGWDFLQNQALLTKTVARLHNL-GSRISLFADGNGN----EHSLQAAKLTGADCIELYTGPYGACYNNPQQ------ 174 (261)
Q Consensus 106 TTegGldv~~~~~~L~~~i~~l~~~-girvSLFIDpd~~----q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~------ 174 (261)
...+|-.+..+.+.+..+++.+++. ++.+++-+-+..+ ...++.+.+.|+|.|-++-..-...+.....
T Consensus 194 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~pv~vK~~~~~~~~~~~~~~~~~~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~ 273 (367)
T 1d3g_A 194 SLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETG 273 (367)
T ss_dssp ---CHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 10122101357888887754301245776301357764302344467788766432101133333334654442112455
Q ss_pred ----HHHHHHHHHHHHHHHHHC--CCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHH-H-HHHHHHHHHHHHHHHHH
Q ss_conf ----336668899987665415--6235207898-9877999997369963884259999-9-99994099999999999
Q gi|254780438|r 175 ----ERIFLNKLAITAQLAQKM--DLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFA-A-TALECGVKEAVFCFRRA 245 (261)
Q Consensus 175 ----~~~el~~i~~aa~~A~~l--gL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiI-s-eAl~~GL~~aI~~~~~i 245 (261)
...--..+....+.+... .+.|-+--|+ +.+-+.+.++ -+-+=|-||-+++ . -.++-.+.+-++.+...
T Consensus 274 ~~sg~~~~~~~~~~l~~i~~~~~~~~~Ii~~GGI~~~~Dv~k~l~--~GAd~V~igr~~l~~~p~~~~~l~~el~~~m~~ 351 (367)
T 1d3g_A 274 GLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIR--AGASLVQLYTALTFWGPPVVGKVKRELEALLKE 351 (367)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH--CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 332301335658899999998389964899869799999999998--499787520778823907999999999999998
Q ss_pred HH
Q ss_conf 97
Q gi|254780438|r 246 CG 247 (261)
Q Consensus 246 i~ 247 (261)
+.
T Consensus 352 ~g 353 (367)
T 1d3g_A 352 QG 353 (367)
T ss_dssp TT
T ss_pred CC
T ss_conf 49
No 111
>>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1} (A:)
Probab=57.76 E-value=15 Score=17.96 Aligned_cols=109 Identities=10% Similarity=-0.013 Sum_probs=74.8
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC-CCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 07212897101655533357822133378899999862026963899725-44441479999740661465112111024
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD-GNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID-pd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
+.|.+++| |+|.. .+..+.+.++..+..|++.|++++|==. ...+ ++....++.+|.|-|+..-..+.
T Consensus 303 ~~~~~l~~------Ei~e~---~~~~~~~~~~~~~~~l~~~G~~~~iddfg~~~~--~~~~l~~l~~d~iKld~~~~~~~ 371 (437)
T 3hvb_A 303 LPPESLVF------QISEA---DATSYLKQAKQLTQGLATLHCQAAISQFGCSLN--PFNALKHLTVQFIKIDGSFVQDL 371 (437)
T ss_dssp CCTTCEEE------EEEHH---HHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSS--HHHHHTTSCCSEEEECGGGSSCC
T ss_pred CCCHHEEE------ECCCC---HHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC--CHHHHHHCCCCEEEECHHHHHCC
T ss_conf 88044253------02320---111002333234555555420012036898864--49999718999999898998514
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 44356433666889998766541562352078989877999997369
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIP 215 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip 215 (261)
-.+.. . .-+......|+++|+.|=|..==|-+-+.. +.+++
T Consensus 372 ~~~~~-~----~~~~~~~~~a~~~~~~viaegVe~~~~~~~-l~~~g 412 (437)
T 3hvb_A 372 NQVEN-Q----EILKGLIAELHEQQKLSIVPFVESASVLAT-LWQAG 412 (437)
T ss_dssp SSHHH-H----HHHHHHHHHHHHTTCEEEECCCCSHHHHHH-HHHHT
T ss_pred CCCHH-H----HHHHHHHHHHHHCCCCEEEECCCCHHHHHH-HHHCC
T ss_conf 88637-9----999999999998599589956893999999-99769
No 112
>>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fructose 6-phosphate, carbohydrate metabolism, hydrolase, structural genomics; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* (A:61-279)
Probab=57.73 E-value=9.4 Score=19.33 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=58.8
Q ss_pred HHHHHHHHHCCC-EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEE
Q ss_conf 899999850721-28971016555333578221333788999998620269638997-2544441479999740661465
Q gi|254780438|r 82 TFLNLCERYKPE-QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIE 159 (261)
Q Consensus 82 e~i~ia~~ikP~-qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VE 159 (261)
++-.+......- .+|+.||. +|+ +.++.|.+.||+||+= -+.+++| ...|.+.|+..|=
T Consensus 95 e~~~l~~~~~~~~~i~i~~~~-------~g~----------~~i~~l~~~GI~~slgHs~~s~~q--a~~A~~~Ga~~vt 155 (219)
T 3iv8_A 95 MIDTICANSDVIAKVTLAPEN-------NKP----------EHIEKLVKAGIVVSIGHTNATYSE--ARKSFESGITFAT 155 (219)
T ss_dssp HHHHHHHTTTSEEEEEECCTT-------SCH----------HHHHHHHHTTCEEEECSBCCCHHH--HHHHHHTTCCEES
T ss_pred HHHHHHHCCCCCEEEECCCCC-------CCH----------HHHHHHHHCCCCCCCCCCHHHHHH--HHHHHHCCCHHHH
T ss_conf 677776302542012102233-------313----------568999861566421222024999--9998753604544
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE-EECCCCCHHHHHH
Q ss_conf 1121110244435643366688999876654156235-2078989877999
Q gi|254780438|r 160 LYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQI-NAGHDLTIQNIPN 209 (261)
Q Consensus 160 lhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~V-nAGHgLn~~Nl~~ 209 (261)
-+-+-....... . ..+..++-.....-.++ -+|+-+.-+.+.-
T Consensus 156 h~~N~m~~~~hr---~----~g~v~a~l~~~~~~~eiI~DgiHv~~~~~~~ 199 (219)
T 3iv8_A 156 HLFNAMTPMVGR---E----PGVVGAIYDTPEVYAGIIADGFHVDYANIRI 199 (219)
T ss_dssp STTSSBCCCBTT---B----CHHHHHHHHCTTCEEEEECSSSSSCHHHHHH
T ss_pred HHHCCCCCCCCC---C----CHHHHHHHHHHHHHHHHEECCEEECHHHHHH
T ss_conf 332022211111---1----0167888764001232120203305045557
No 113
>>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate ligand, isomerase; HET: AKG; 1.65A {Deinococcus ficus} (A:1-233)
Probab=57.18 E-value=15 Score=17.90 Aligned_cols=70 Identities=11% Similarity=0.133 Sum_probs=41.4
Q ss_pred HHHHHHHHHCCCCEEE--------EECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE---C-CCH----HHHHHHHHH
Q ss_conf 9999999974998999--------82478833488899999887400013674158883---4-856----899999850
Q gi|254780438|r 27 VHIGKIALQSGASGLT--------VHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG---Y-PNE----TFLNLCERY 90 (261)
Q Consensus 27 ~~~a~~~~~~GadgIT--------vH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg---~-p~~----e~i~ia~~i 90 (261)
...|+++.++|.+.+- .+..||.-=+..+++....+.+... .+.++-..+ + .++ +....+.+.
T Consensus 26 ~~sA~i~~~~G~~~i~~~~~~~a~~~G~~d~~~~~~~~~~~~~~~i~~~-~~~p~ivD~~~G~g~~~~~~~~~~~~~~~a 104 (233)
T 2ze3_A 26 VASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRA-VAIPVNADIEAGYGHAPEDVRRTVEHFAAL 104 (233)
T ss_dssp HHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHH-CSSCEEEECTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC-CCCCEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999986999999727999997699996647799999999998603-897679971666676279999999999982
Q ss_pred CCCEEEE
Q ss_conf 7212897
Q gi|254780438|r 91 KPEQITL 97 (261)
Q Consensus 91 kP~qvtL 97 (261)
-.+-|+|
T Consensus 105 Ga~~i~i 111 (233)
T 2ze3_A 105 GVAGVNL 111 (233)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
T ss_conf 3876875
No 114
>>1nj1_A Proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase; HET: 5CA; 2.55A {Methanothermobacterthermautotrophicus} (A:300-430)
Probab=57.16 E-value=15 Score=17.90 Aligned_cols=66 Identities=14% Similarity=0.050 Sum_probs=46.2
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 5072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
.+.|.||++||-.-...+ ......-..+...|++.|++|-+---...-.+.+..|...|+..+=+-
T Consensus 12 ~iaP~~v~iipv~~~~~~-------~~~~~~a~~l~~~Lr~~gi~v~~d~~~~~l~kkik~A~~~g~p~~iii 77 (131)
T 1nj1_A 12 DVAAHQVVIVPIIFKKAA-------EEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEI 77 (131)
T ss_dssp TTSSCSEEEEECCSSSSH-------HHHHHHHHHHHHHHHTTTCCEEECCCSSCHHHHHHHHHHEECSEEEEE
T ss_pred HHCCCEEEEEECCCCCCH-------HHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 217624899973577640-------899999999999997569962458888615379999997289889997
No 115
>>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* (A:1-114,A:159-377)
Probab=56.74 E-value=15 Score=17.85 Aligned_cols=122 Identities=10% Similarity=0.034 Sum_probs=83.5
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC----CEEEEEECCC--------CCCHH---HHHHHHCCCCEEEECCCCC
Q ss_conf 6555333578221333788999998620269----6389972544--------44147---9999740661465112111
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNLG----SRISLFADGN--------GNEHS---LQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~g----irvSLFIDpd--------~~q~~---i~~a~~~Gad~VElhTG~Y 165 (261)
..+..|.+.|=++.....++.++++..++.. +-|.+...-+ ..+.. ++...+.|++.+.+|++++
T Consensus 156 ~~N~R~d~yGg~lenR~r~~~eii~aVr~a~g~~~i~vr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~i~i~~~~~ 235 (333)
T 2r14_A 156 GTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDW 235 (333)
T ss_dssp TTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 35765454442131200468899999998738651232442110247876543588999875224224731778614764
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 024443564336668899987665415623520789898779999973699638842599999999
Q gi|254780438|r 166 GACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 166 a~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
-..+...... . +.......++-|=+-.|++.+.....+. -...+=|.+|-.++++--
T Consensus 236 ~~~~~~~~~~--~------~~~~~~~~~ipvi~~G~i~~~~a~~~l~-~~~~D~V~igR~~ladP~ 292 (333)
T 2r14_A 236 IGGDITYPEG--F------REQMRQRFKGGLIYCGNYDAGRAQARLD-DNTADAVAFGRPFIANPD 292 (333)
T ss_dssp -----CCCTT--H------HHHHHHHCCSEEEEESSCCHHHHHHHHH-TTSCSEEEESHHHHHCTT
T ss_pred CCCCCCCCHH--H------HHHHHHHCCCCEEEECCCCHHHHHHHHH-CCCCCEEHHHHHHHHCCH
T ss_conf 5766320288--9------9999987287789968939999999998-699638535399887940
No 116
>>1o0y_A Deoxyribose-phosphate aldolase; TM1559, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} (A:)
Probab=56.53 E-value=16 Score=17.83 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=64.6
Q ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCC--HHHHHHHHCCCCEEEE
Q ss_conf 99998507212897101655533357822133378899999862026-96389972544441--4799997406614651
Q gi|254780438|r 84 LNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRISLFADGNGNE--HSLQAAKLTGADCIEL 160 (261)
Q Consensus 84 i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~-girvSLFIDpd~~q--~~i~~a~~~Gad~VEl 160 (261)
......-..+..++++..+. +...+|. .....+.++++.++.. ...+.+-.-++.++ ...+.+.+.|+|.|.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~ii~k~~~~~~~~~~~~~~~~~aga~~i~~ 192 (260)
T 1o0y_A 117 AIFAVESGADEIDMVINVGM--LKAKEWE--YVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKT 192 (260)
T ss_dssp HHHHHHHTCSEEEEECCHHH--HHTTCHH--HHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHCCCCEEEEEECCCH--HHCCCHH--HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEC
T ss_conf 99999859987999731253--2267889--9999999999972523221333000258199999999999769886873
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHH
Q ss_conf 121110244435643366688999876654156235207898-9877999997369963884259999
Q gi|254780438|r 161 YTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFA 227 (261)
Q Consensus 161 hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiI 227 (261)
.+|.-.... .. ..+..+ ..+....+.|-|.=|. +-.-+.+.++ . .-+.|.||-+++
T Consensus 193 ~~~~~~~~~-~~----~~l~~~----~~~~~~~ipIia~GGI~tg~Dv~kala-l-GAd~V~igt~~~ 249 (260)
T 1o0y_A 193 STGFGTGGA-TA----EDVHLM----KWIVGDEMGVKASGGIRTFEDAVKMIM-Y-GADRIGTSSGVK 249 (260)
T ss_dssp CCSSSSCCC-CH----HHHHHH----HHHHCTTSEEEEESSCCSHHHHHHHHH-T-TCSEEEESCHHH
T ss_pred CCCCCCCCC-CH----HHHHHH----HHHHCCCCEEECCCCCCCHHHHHHHHH-H-HHHHHCCCCHHH
T ss_conf 788888885-78----999999----998676876878779899999999999-8-518747875899
No 117
>>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural genomics; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hrj_A* 3hri_A (A:357-456)
Probab=55.97 E-value=16 Score=17.77 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=46.3
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+.|-||.++|-.++ ....-..+...|++.|++|-+......-.+.++.|...|+..+=+-
T Consensus 3 ~aP~~v~Ii~~~~~------------~~~~a~~i~~~Lr~~gi~v~~d~~~~~~~k~~k~a~~~g~~~~iii 62 (100)
T 3lc0_A 3 PHVVDDVVIPFDES------------MRPHALAVLRRLRDAGRSADIILDKKKVVQAFNYADRVGAVRAVLV 62 (100)
T ss_dssp CCCEEEEEEESSGG------------GHHHHHHHHHHHHHTTCCEEECCSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCEEEEEECCHH------------HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 66532899987879------------9999999999999779989995189999999999998798999998
No 118
>>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} (A:1-351)
Probab=55.14 E-value=15 Score=17.87 Aligned_cols=60 Identities=20% Similarity=0.139 Sum_probs=39.6
Q ss_pred HHHHHHHHCCCEEEEEECCCCC-----CCCCCCCCHH---------HHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 9999985072128971016555-----3335782213---------3378899999862026963899725444
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQ-----LTSDHGWDFL---------QNQALLTKTVARLHNLGSRISLFADGNG 142 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~e-----lTTegGldv~---------~~~~~L~~~i~~l~~~girvSLFIDpd~ 142 (261)
-++...+.-=+.+-|-|--... -+..+|.++. +..+.|+..|+.+++.||+|-+=+.++-
T Consensus 35 ~Ldyl~~lGv~~i~l~P~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~aH~~gi~Vi~D~v~nH 108 (351)
T 3dhu_A 35 DLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNH 108 (351)
T ss_dssp THHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 37899876997999599674877788888899968334687585679999999999999988998998512345
No 119
>>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research consortium, nysgxrc; 2.60A {Bacillus halodurans} (A:61-330)
Probab=55.10 E-value=16 Score=17.67 Aligned_cols=202 Identities=11% Similarity=0.062 Sum_probs=128.4
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf 68998999999997499899982478833488899999887400013674158883485689999985072128971016
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDD 101 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~ 101 (261)
..=++....+-|...|.-.|-.+|..........+....+.-.......+.|.+-+..+...-..........++.+.--
T Consensus 15 ~~ed~~s~s~aA~~GGvTti~~mp~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 94 (270)
T 3hm7_A 15 EWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGNIDHLQDLHDGGVIGFKAF 94 (270)
T ss_dssp GGCCSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTCGGGHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCHHHHHHHHCCCCCCCCC
T ss_conf 21157778999984786244301235677521156677899876314521342103201014214555542132200001
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCH-HHHHHHHHHHHHHH
Q ss_conf 55533357822133378899999862026963899725444414799997406614651121110-24443564336668
Q gi|254780438|r 102 PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYG-ACYNNPQQERIFLN 180 (261)
Q Consensus 102 r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya-~a~~~~~~~~~el~ 180 (261)
..- +|.+|.-+ .+...|..+.+..+..|..+++--+ |.+. +....+ + -.+.|..+ .++........|..
T Consensus 95 ~~~-~~~~~~~~-~d~~~l~~~l~~~~~~g~~i~vH~E-~~~~--~~~~~~-~----~~~~g~~~~~~~~~~rp~~~E~~ 164 (270)
T 3hm7_A 95 MSE-CGTDDFQF-SHDETLLKGMKKIAALGSILAVHAE-SNEM--VNALTT-I----AIEEQRLTVKDYSEARPIVSELE 164 (270)
T ss_dssp SSS-CSSSSSCC-CCHHHHHHHHHHHHHHTCCEEEECC-CHHH--HHHHHH-H----HHHTTCCSHHHHHHHSCHHHHHH
T ss_pred CCC-CCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEEC-CHHH--HHHHHH-H----HHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 222-22476322-2247777777777513755887512-1034--554443-3----31056542124533473889987
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH-----CCCCEEEEEHHHHHHHHHHHH
Q ss_conf 899987665415623520789898779999973-----699638842599999999940
Q gi|254780438|r 181 KLAITAQLAQKMDLQINAGHDLTIQNIPNLINA-----IPYISEISVGHAFAATALECG 234 (261)
Q Consensus 181 ~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~-----Ip~I~EvsIGHaiIseAl~~G 234 (261)
.+..+..+|...|..+|.-|==+-+.+.. +.. ++---|+..-|-+..+..+.+
T Consensus 165 av~~~~~la~~~~~~i~i~HiSt~~~~~~-i~~ak~~g~~vt~Et~ph~L~l~~~~~~~ 222 (270)
T 3hm7_A 165 AVERILRFAQLTCCPIHICHVSSRKVLKR-IKQAKGEGVNVSVETCPHYLLFSLDEFAE 222 (270)
T ss_dssp HHHHHHHHHHHHTCCEEECCCCCHHHHHH-HHHHHHTTCCEEEEECHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHH-HHHHHHCCCCCEEEEECHHHHCCHHHHHC
T ss_conf 65667776640487437874130567888-99898648840456411142079889731
No 120
>>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* (A:)
Probab=54.85 E-value=17 Score=17.64 Aligned_cols=191 Identities=13% Similarity=0.100 Sum_probs=124.6
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEE
Q ss_conf 07886899899999999749989998247883348889999988740001367415888348568999998507212897
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITL 97 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtL 97 (261)
.++.+..+.++.++.++++|+|-|.+-..... ....+..+++.+.. ....-...-..+..++.+.+...+.+++
T Consensus 13 i~~~~~~~~~~~~~~~~~aG~d~i~l~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~g~~~i~~ 86 (212)
T 2v82_A 13 LRGITPDEALAHVGAVIDAGFDAVEIPLNSPQ---WEQSIPAIVDAYGD---KALIGAGTVLKPEQVDALARXGCQLIVT 86 (212)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEETTSTT---HHHHHHHHHHHHTT---TSEEEEECCCSHHHHHHHHHTTCCEEEC
T ss_pred ECCCCHHHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHCCC---CEEEEECCCCCHHHHHHHHHCCCCEEEC
T ss_conf 81799999999999999869998999589912---99999999996687---5088634542477899999607877766
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
-.+ ....+...+..+....+-+.+. ++ +..+.+.|+|.+-+........
T Consensus 87 ~~~-------------------~~~~~~~~~~~~~~~~~~~~~~-~e--~~~a~~~~~~~~~~~~~~~~~~--------- 135 (212)
T 2v82_A 87 PNI-------------------HSEVIRRAVGYGXTVCPGCATA-TE--AFTALEAGAQALKIFPSSAFGP--------- 135 (212)
T ss_dssp SSC-------------------CHHHHHHHHHTTCEEECEECSH-HH--HHHHHHTTCSEEEETTHHHHCH---------
T ss_pred CCC-------------------CHHHHHHHHHCCCCCCCCCCCH-HH--HHHHHHCCCCEEEECCCCCCCH---------
T ss_conf 989-------------------9899999997499723772877-99--9999986999101102112588---------
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 668899987665415623520789898779999973699638842599999-----9999409999999999997410
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAA-----TALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIs-----eAl~~GL~~aI~~~~~ii~~~~ 250 (261)
+.......+....+.+-|.=|.+.+|+..+++ -+.+=|-+|-+|.. +++...+++-.+++++.+.+-+
T Consensus 136 ---~~~~~~~~~~~~~i~i~a~GGi~~~~i~~~l~--~Gad~v~vgsai~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 208 (212)
T 2v82_A 136 ---QYIKALKAVLPSDIAVFAVGGVTPENLAQWID--AGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQLHH 208 (212)
T ss_dssp ---HHHHHHHTTSCTTCEEEEESSCCTTTHHHHHH--HTCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHHHHHHC--
T ss_pred ---HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH--CCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf ---88987615587787797347988888999998--69879997389738998699999999999999999996752
No 121
>>1oya_A OLD yellow enzyme; oxidoreductase (flavoprotein); HET: FMN; 2.00A {Saccharomyces pastorianus} (A:1-120,A:164-351)
Probab=54.20 E-value=17 Score=17.58 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHH-HCC------CEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC-CC----
Q ss_conf 485689999985-072------128971-01655533357822133378899999862026963899725444-41----
Q gi|254780438|r 78 YPNETFLNLCER-YKP------EQITLV-PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG-NE---- 144 (261)
Q Consensus 78 ~p~~e~i~ia~~-ikP------~qvtLV-Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~-~q---- 144 (261)
-|++.+++.-.+ -+. ...|.| |+.+..--.-|-|+ .++-.-+++++...|+.|.++.+=+-..- ++
T Consensus 49 ~p~~~~~~~y~~ra~~g~glii~e~~~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~~vh~~g~~~~~Ql~h~G~~~i~~~ 127 (308)
T 1oya_A 49 PNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWS-EEQMVEWTKIFNAIHEKKSFVWVQLWVLGKDEIKQY 127 (308)
T ss_dssp CCTTTHHHHHHHHTCSTTCEEEEEEEESSGGGCCCTTSCBSSS-HHHHHHHHHHHHHHHHTTCEEEEEEECCGHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH
T ss_conf 9879999999999739907999655687765477999875689-899877679999996177544143441467889999
Q ss_pred -----HHHHHHHHCCCCEEEECCCC
Q ss_conf -----47999974066146511211
Q gi|254780438|r 145 -----HSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 145 -----~~i~~a~~~Gad~VElhTG~ 164 (261)
..-+.+++.|+|.||||+|.
T Consensus 128 i~~~~~aA~~a~eaG~DgIein~~~ 152 (308)
T 1oya_A 128 IKEYVQAAKNSIAAGADGVEIHSAN 152 (308)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 9999999999997398878984002
No 122
>>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* (A:1-32,A:351-458)
Probab=53.87 E-value=17 Score=17.54 Aligned_cols=64 Identities=13% Similarity=0.069 Sum_probs=46.5
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 5072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
.+.|.||++||-.... ....+...++...|++.|++|-+=.....-.+.+..|..+|+..+=+-
T Consensus 44 ~lAP~qv~II~i~~~~---------ee~~~~a~~l~~~Lr~~gi~v~~D~~~~slgkkik~A~~~gip~vIiI 107 (140)
T 2i4l_A 44 AVAPFRVTILNLKQGD---------AATDAACDQLYRELSAKGVDVLYDDTDQRAGAKFATADLIGIPWQIHV 107 (140)
T ss_dssp TTCSCSEEEEESSTTC---------HHHHHHHHHHHHHHHHTTCCEEEECSSCCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCEEEEEECCCCH---------HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 4444427999647884---------999999999999999789989998999998799999987699989999
No 123
>>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} (A:22-251)
Probab=53.81 E-value=17 Score=17.53 Aligned_cols=188 Identities=9% Similarity=-0.001 Sum_probs=126.4
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC-CHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 899999999749989998247883348889999988740001367415888348-5689999985072128971016555
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP-NETFLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-~~e~i~ia~~ikP~qvtLVPe~r~e 104 (261)
..+.+..+...|++.+.+.-..-...-..+.+..+++.+ .+++-+=+.. .+.+++.+.+.-.+.+.+--.
T Consensus 41 ~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~i~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~Gad~i~~~~~---- 111 (230)
T 1i4n_A 41 SLEDFIRMYDELADAISILTEKHYFKGDPAFVRAARNLT-----CRPILAKDFYIDTVQVKLASSVGADAILIIAR---- 111 (230)
T ss_dssp CHHHHHHHHHHHCSEEEEECCCSSSCCCTHHHHHHHTTC-----CSCEEEECCCCSTHHHHHHHHTTCSEEEEEGG----
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHC-----CCCCEECCEEECHHHHHHHHHHCCCHHHHHHH----
T ss_conf 999999998454888999647787899999999999717-----88711034030598999998705752889987----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 33357822133378899999862026963899725444414799997406614651121110244435643366688999
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAI 184 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~ 184 (261)
+. ....+...++..+..++.+-.-.-+. +...+.+.+.+++.+-+...-+........ ....
T Consensus 112 -------~~--~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~--- 173 (230)
T 1i4n_A 112 -------IL--TAEQIKEIYEAAEELGMDSLVEVHSR--EDLEKVFSVIRPKIIGINTRDLDTFEIKKN----VLWE--- 173 (230)
T ss_dssp -------GS--CHHHHHHHHHHHHTTTCEEEEEECSH--HHHHHHHTTCCCSEEEEECBCTTTCCBCTT----HHHH---
T ss_pred -------HC--CHHHHHHHHHHHHHHCCEEEEEECCH--HHHHHHHCCCCCCEEEECCCCHHHHHCCHH----HHHH---
T ss_conf -------56--99999999999998566145351899--999987254788289970521776412489----9999---
Q ss_pred HHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87665415623520789898779999973699638842599999999940999999999999
Q gi|254780438|r 185 TAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRAC 246 (261)
Q Consensus 185 aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii 246 (261)
........+.|-|+=|.+-.|+..+++ -+.+=|-+|-+|.... -..++++++++.+
T Consensus 174 -~~~~~~~~vpi~a~GGI~~~~~~~~~~--aGad~VvvGsaI~~a~---d~~~~~~~l~~ai 229 (230)
T 1i4n_A 174 -LLPLVPDDTVVVAESGIKDPRELKDLR--GKVNAVLVGTSIMKAE---NPRRFLEEMRAWS 229 (230)
T ss_dssp -HGGGSCTTSEEEEESCCCCGGGHHHHT--TTCSEEEECHHHHHCS---SHHHHHHHHHHHC
T ss_pred -HHHHCCCCCEEEECCCCCCHHHHHHHH--HCCCEEEECHHHHCCC---CHHHHHHHHHHHC
T ss_conf -986178899899779999999999998--0899999887876799---9899999998201
No 124
>>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} (A:)
Probab=53.50 E-value=17 Score=17.50 Aligned_cols=185 Identities=15% Similarity=0.020 Sum_probs=97.0
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEE-EEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE--EEE----ECCCH---HHHHHH
Q ss_conf 078868998999999997499899-98247883348889999988740001367415--888----34856---899999
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGL-TVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL--NIE----GYPNE---TFLNLC 87 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgI-TvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el--NiE----g~p~~---e~i~ia 87 (261)
.--..++.+-+....|.++...+. .+...+++ +...++.+... +.++ |+- ..+.+ .+....
T Consensus 10 ~~l~~~~t~~~~~~~~~~a~~~~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 80 (220)
T 1ub3_A 10 TLLKPTATLEEVAKAAEEALEYGFYGLCIPPSY-------VAWVRARYPHA--PFRLVTVVGFPLGYQEKEVKALEAALA 80 (220)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHTCSEEECCGGG-------HHHHHHHCTTC--SSEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCEEEECHHH-------HHHHHHHHCCC--CCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 379999999999999999998699489989999-------99999984279--973157872366667188999999999
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCC--HHHHHHHHCCCCEEEECCCC
Q ss_conf 8507212897101655533357822133378899999862026-96389972544441--47999974066146511211
Q gi|254780438|r 88 ERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRISLFADGNGNE--HSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 88 ~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~-girvSLFIDpd~~q--~~i~~a~~~Gad~VElhTG~ 164 (261)
.+...+..++++..+.-. .++|. ...+.+..++..+++. ...+.....++++. .....+.+.|+|.|-+.+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~ii~k~~~~~~~i~~~a~~a~~~G~dgi~~~~~~ 156 (220)
T 1ub3_A 81 CARGADEVDMVLHLGRAK--AGDLD--YLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGF 156 (220)
T ss_dssp HHTTCSEEEEECCHHHHH--TTCHH--HHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS
T ss_pred HHCCCCEEEEEECCCHHH--CCCHH--HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCC
T ss_conf 980898799974341433--47889--99999999997447873577750252889999999999987406552336776
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 1024443564336668899987665415623520-7898987799999736996388425999
Q gi|254780438|r 165 YGACYNNPQQERIFLNKLAITAQLAQKMDLQINA-GHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 165 Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA-GHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
..... .. ..+..+. + +..-.+.|-+ |-=-+-+-+.+++. .. -+-|-+|-++
T Consensus 157 ~~~~~-~~----~~l~~~~---~-~~~~~i~Ii~~GGIrtg~Dv~k~l~-lG-Ad~V~ig~~~ 208 (220)
T 1ub3_A 157 GPRGA-SL----EDVALLV---R-VAQGRAQVKAAGGIRDRETALRMLK-AG-ASRLGTSSGV 208 (220)
T ss_dssp SSCCC-CH----HHHHHHH---H-HHTTSSEEEEESSCCSHHHHHHHHH-TT-CSEEEETTHH
T ss_pred CCCCC-CH----HHHHHHH---H-HHCCCCEEECCCCCCCHHHHHHHHH-HH-HHHHCCCCHH
T ss_conf 88887-56----9999999---9-8667853978389799999999999-75-1771027199
No 125
>>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* (A:1-311)
Probab=53.10 E-value=18 Score=17.46 Aligned_cols=168 Identities=11% Similarity=0.058 Sum_probs=105.5
Q ss_pred CHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCC-CEEEEEECCC
Q ss_conf 9899999999749989998-2478833488899999887400013674158883485689999985072-1289710165
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKP-EQITLVPDDP 102 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP-~qvtLVPe~r 102 (261)
..+.++....++|.+.|-+ +|.- -+.+...+........... ...=.....+-++.+..... ....+.|-..
T Consensus 62 ~k~~i~~~l~~~Gv~~iE~G~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (311)
T 3ivs_A 62 KKIQIAKALDNFGVDYIELTSPVA-----SEQSRQDCEAICKLGLKCK-ILTHIRCHXDDARVAVETGVDGVDVVIGTSQ 135 (311)
T ss_dssp HHHHHHHHHHHHTCSEEEECCTTS-----CHHHHHHHHHHHTSCCSSE-EEEEEESCHHHHHHHHHTTCSEEEEEEEC--
T ss_pred HHHHHHHHHHHCCCCEEEEECCCC-----CHHHHHHHHHHHHHCCCCC-EEEECCCCHHHHHHHHHCCCCCCEEEEECCH
T ss_conf 999999999980979899977847-----8367999999987168312-2310205806699999705774238862315
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC------CCCCHHHHHHHHCCCCEEEECCCCCHHHHH--HHHH
Q ss_conf 55333578221333788999998620269638997254------444147999974066146511211102444--3564
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG------NGNEHSLQAAKLTGADCIELYTGPYGACYN--NPQQ 174 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp------d~~q~~i~~a~~~Gad~VElhTG~Ya~a~~--~~~~ 174 (261)
.-+..-.+|+.....+.+.+.++..++.|..|++.+.- +.-...++.+.+.|+|+|-| |+... .+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~i~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l-----~Dt~G~~~P~~ 210 (311)
T 3ivs_A 136 YLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGI-----ADTVGCATPRQ 210 (311)
T ss_dssp -----------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEE-----EETTSCCCHHH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCEEC-----CCCCCCCCCCE
T ss_conf 5533201111100233001121001123213233332001343210133233430134221210-----23211358620
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECC--CCCHHHH
Q ss_conf 33666889998766541562352078--9898779
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGH--DLTIQNI 207 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGH--gLn~~Nl 207 (261)
+..+.....-+-..-+++|.=. ||-+-|.
T Consensus 211 ----~~~li~~~~~~~~~~l~~H~Hnd~Gla~An~ 241 (311)
T 3ivs_A 211 ----VYDLIRTLRGVVSCDIECHFHNDTGXAIANA 241 (311)
T ss_dssp ----HHHHHHHHHHHCSSEEEEEEBCTTSCHHHHH
T ss_pred ----EEEEEEEECCCCEEEEEECCCCCHHHHHHHH
T ss_conf ----1258863023310003301255354444789
No 126
>>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} (A:1-120)
Probab=51.83 E-value=8 Score=19.82 Aligned_cols=107 Identities=11% Similarity=-0.042 Sum_probs=67.7
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEEECC-CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 348889999988740001367415888348-5689999985072128971016555333578221333788999998620
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQFPKAELNIEGYP-NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLH 128 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~ 128 (261)
|.++.+|+..+..+....+........-.. .+.+........|....+|=+.-+++--=.++....... .-.
T Consensus 4 R~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~-------~~~ 76 (120)
T 2eui_A 4 VQATLEHLDLLAPLFVKYREFYGXLSYPESSRKFLEKRLRRKESVIYLALADEEDRLLGFCQLYPSFSSL-------SLK 76 (120)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCSEEEEEECSSSCCEEEEEEEEEEEETT-------TTE
T ss_pred EECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCC-------CCC
T ss_conf 9998999999999999999995799988999999999962899856999994489289999960224544-------558
Q ss_pred CCCCEEEEEECCCCCC---------HHHHHHHHCCCCEEEECCC
Q ss_conf 2696389972544441---------4799997406614651121
Q gi|254780438|r 129 NLGSRISLFADGNGNE---------HSLQAAKLTGADCIELYTG 163 (261)
Q Consensus 129 ~~girvSLFIDpd~~q---------~~i~~a~~~Gad~VElhTG 163 (261)
...---++||+|+--- ..++.|++.|+..|+|+|+
T Consensus 77 ~~~~i~~l~V~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~L~ts 120 (120)
T 2eui_A 77 RVWILNDIYVAEEARRQLVADHLLQHAKQXARETHAVRXRVSTS 120 (120)
T ss_dssp EEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 78999667743322475899999999999999859998999987
No 127
>>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} (A:39-143)
Probab=51.79 E-value=18 Score=17.32 Aligned_cols=48 Identities=8% Similarity=-0.091 Sum_probs=37.1
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCC-CCHHHH
Q ss_conf 999862026963899725444414799997406614651121-110244
Q gi|254780438|r 122 KTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTG-PYGACY 169 (261)
Q Consensus 122 ~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG-~Ya~a~ 169 (261)
.+-.-.+..|+++.+|++.+.++.-++..+..|++.+..-.| .|.++.
T Consensus 38 a~A~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~V~~v~~~~~~~~~~ 86 (105)
T 1y7l_A 38 ALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAI 86 (105)
T ss_dssp HHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHH
T ss_pred HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 8899986414554111012345777766650476148406665641156
No 128
>>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling protein; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A* (A:150-413)
Probab=51.21 E-value=19 Score=17.26 Aligned_cols=94 Identities=10% Similarity=0.038 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 33788999998620269638997-25444414799997406614651121110244435643366688999876654156
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMD 193 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg 193 (261)
.+...+...+..+++.|+++++= +..+.. ++.....+++|.|-+.-.-+......+. .. ..+......|+++|
T Consensus 139 ~~~~~~~~~l~~l~~~G~~i~ldd~g~~~~--~~~~l~~~~~~~iKid~~~~~~~~~~~~-~~---~~~~~~~~~a~~~~ 212 (264)
T 3gfz_A 139 TCFDQFRKVLKALRVAGMKLAIDDFGAGYS--GLSLLTRFQPDKIKVDAELVRDIHISGT-KQ---AIVASVVRCCEDLG 212 (264)
T ss_dssp TCSTTHHHHHHHHHHHTCEEEEEEETSSSC--SHHHHTTCCCSEEEECHHHHTTTTTBHH-HH---HHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEECCCCCCCH--HHHHHHHCCCCEEEECHHHHHCCCCCHH-HH---HHHHHHHHHHHHCC
T ss_conf 446889999999885387535557788710--4899985899999989899841045966-89---99999999999859
Q ss_pred CEEEECCCCCHHHHHHHHHHCC
Q ss_conf 2352078989877999997369
Q gi|254780438|r 194 LQINAGHDLTIQNIPNLINAIP 215 (261)
Q Consensus 194 L~VnAGHgLn~~Nl~~~i~~Ip 215 (261)
+.|-|-.==|-+-+.. +...+
T Consensus 213 i~viaegVe~~~~~~~-l~~~g 233 (264)
T 3gfz_A 213 ITVVAEGVETLEEWCW-LQSVG 233 (264)
T ss_dssp CEEEEECCCSHHHHHH-HHHTT
T ss_pred CEEEEEECCCHHHHHH-HHHCC
T ss_conf 9899971882999999-99779
No 129
>>1ad1_A DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus} (A:)
Probab=51.14 E-value=19 Score=17.25 Aligned_cols=117 Identities=11% Similarity=0.149 Sum_probs=75.0
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEEC---CCCCCCCCHHHH-HHHHHHHCC-CCCCCEEEEEECC-----------------
Q ss_conf 689989999999974998999824---788334888999-998874000-1367415888348-----------------
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHP---RPDQRHIRYTDL-PEIRRLIDE-QFPKAELNIEGYP----------------- 79 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~---R~DrRHI~~~Dv-~~l~~~~~~-~~~~~elNiEg~p----------------- 79 (261)
+....++.|....+.|||=|.+.. ||+...+....- ..+..++.. ...++++-|.-.-
T Consensus 24 ~~~~~~~~a~~~~~~GAdiIDig~~st~P~~~~v~~~ee~~r~~~vv~~i~~~~vpisIDt~~~~v~~~al~~G~~iINs 103 (266)
T 1ad1_A 24 NVESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVLPVVEAIVGFDVKISVDTFRSEVAEACLKLGVDIIND 103 (266)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEEEECSCHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCCEECCCHHHHHHHHHCCCCEEEC
T ss_conf 99999999999998799899978861799998789999987317711232145752030036878899997369767514
Q ss_pred ------CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE-EEEECCCC
Q ss_conf ------5689999985072128971016555333578221333788999998620269638-99725444
Q gi|254780438|r 80 ------NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRI-SLFADGNG 142 (261)
Q Consensus 80 ------~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girv-SLFIDpd~ 142 (261)
.++++.++.++.+.-|++-......-.+ -+..-..+++..+..+.+.||.- .+++||..
T Consensus 104 isg~~~~~~~~~l~~~~~~~vv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Gi~~~~IiiDPg~ 169 (266)
T 1ad1_A 104 QWAGLYDHRMFQVVAKYDAEIVLMHNGNGNRDEP----VVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGI 169 (266)
T ss_dssp TTTTSSCTHHHHHHHHTTCEEEEECCCCTTCCSC----HHHHHHHHHHHHHHHHHHTTCCGGGEEEECCT
T ss_pred CCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCC----CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 2434455204557640488615642203543211----10024667889999998511452358861576
No 130
>>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} (A:)
Probab=50.73 E-value=19 Score=17.21 Aligned_cols=183 Identities=15% Similarity=0.100 Sum_probs=109.0
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCC
Q ss_conf 99999749989998247883348889999988740001367415888348568999998507212897101655533357
Q gi|254780438|r 30 GKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQLTSDH 109 (261)
Q Consensus 30 a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTeg 109 (261)
..-+++.++..|--.-+.-..+.-..-....+.......-.+=+++-=..+.+++.-+++.-=+.|-+= . -
T Consensus 34 i~AAe~~~sPvIiq~~~~~~~~~~~~~~~~~~~~A~~~~VPV~lHlDH~~~~e~i~~ai~~GftSvMiD--g-------S 104 (305)
T 1rvg_A 34 LEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYESVLRALRAGFTSVMID--K-------S 104 (305)
T ss_dssp HHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSHHHHHHHHHTTCSEEEEC--C-------T
T ss_pred HHHHHHHCCCEEEECCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEC--C-------C
T ss_conf 999999799999997846776654799999999976069958997432258777768764687668867--8-------6
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCEEE--------------------EEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 82213337889999986202696389--------------------9725444414799997406614651121110244
Q gi|254780438|r 110 GWDFLQNQALLTKTVARLHNLGSRIS--------------------LFADGNGNEHSLQAAKLTGADCIELYTGPYGACY 169 (261)
Q Consensus 110 Gldv~~~~~~L~~~i~~l~~~girvS--------------------LFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~ 169 (261)
=+.+..|-..-+++++..+..|+-|- ++- +|++ ..+..+++|+|.+=+-.|.---.|
T Consensus 105 ~lp~eeNi~~T~evv~~a~~~gv~VE~ElG~vgg~ed~~~~~~~~~~~T--~pe~-a~~Fv~~tgvD~LAvsiGt~HG~y 181 (305)
T 1rvg_A 105 HEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLT--NPEE-ARIFMERTGADYLAVAIGTSHGAY 181 (305)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCC--CHHH-HHHHHHHHCCSEEEECSSCCSSSB
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC--CHHH-HHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 2237778999999999878865401100013203456655565311237--8899-999999968565244431555033
Q ss_pred HH---HHHHHHHHHHHHHHHH-----------------HHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 43---5643366688999876-----------------654156235207898987799999736996388425999
Q gi|254780438|r 170 NN---PQQERIFLNKLAITAQ-----------------LAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 170 ~~---~~~~~~el~~i~~aa~-----------------~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
.. ++-.-.-|++|+++.. .....|+..|.|+|+.-+.+...++ .+|.-+||+-.+
T Consensus 182 ~~~~~p~L~~~~L~~I~~~~~~PLVlHGgS~~p~~~~~~~~~~g~v~hg~sG~~~e~i~~ai~--~Gi~KiNi~T~~ 256 (305)
T 1rvg_A 182 KGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAIS--LGIAKINTDTDL 256 (305)
T ss_dssp CSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHHHHHH--TTEEEEEECHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH--CCEEEEEECHHH
T ss_conf 776643210879999971479886435776664888753022111246667999999999986--596899848189
No 131
>>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (B:310-418)
Probab=50.64 E-value=19 Score=17.20 Aligned_cols=40 Identities=20% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 6963899725444414799997406614651121110244
Q gi|254780438|r 130 LGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACY 169 (261)
Q Consensus 130 ~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~ 169 (261)
.|-||.+|-||+..-.-.+..+|+|...+...|+.+..-+
T Consensus 2 ~GKrv~i~gd~~~~~~l~~~l~ElGm~vv~~~~~~~~~~~ 41 (109)
T 1mio_B 2 QGKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKF 41 (109)
T ss_dssp TTCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCHHH
T ss_conf 7987999888188999999999849901488726897777
No 132
>>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05913, PSI-2, protein structure initiative; 2.15A {Enterococcus faecalis V583} (A:1-225)
Probab=50.60 E-value=15 Score=17.90 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=14.6
Q ss_pred HHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 88999998620269638997254
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDp 140 (261)
+++.+.-+.|++.||++.-||--
T Consensus 158 ~~f~~~n~~~k~~gi~t~AFI~g 180 (225)
T 2p0o_A 158 TFFNEKNRWLKELGLQVFTFVPG 180 (225)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 99999999999779968999757
No 133
>>1x7f_A Outer surface protein; structural genomics, unknown function, protein structure initiative, MCSG, PSI; 2.30A {Bacillus cereus atcc 14579} (A:1-267)
Probab=49.70 E-value=20 Score=17.10 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=18.9
Q ss_pred HHHHHHHHHHCCCCEE--EEECCCCCCCCCHHHHHHHHHHHC
Q ss_conf 8999999997499899--982478833488899999887400
Q gi|254780438|r 26 LVHIGKIALQSGASGL--TVHPRPDQRHIRYTDLPEIRRLID 65 (261)
Q Consensus 26 ~~~~a~~~~~~GadgI--TvH~R~DrRHI~~~Dv~~l~~~~~ 65 (261)
..+..+.+-++|...| .+|.=||-.-...+.+..|.+.++
T Consensus 43 ~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~ 84 (267)
T 1x7f_A 43 DMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAK 84 (267)
T ss_dssp HHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999879988970476478887999999999999999
No 134
>>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} (A:)
Probab=48.59 E-value=21 Score=16.99 Aligned_cols=203 Identities=10% Similarity=0.005 Sum_probs=112.9
Q ss_pred CCCCHHHHHHHHCCCCCCC---CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC--C
Q ss_conf 3221443223220788689---9899999999749989998247883348889999988740001367415888348--5
Q gi|254780438|r 6 SVNLNAVAVLRNRRNLPWP---NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP--N 80 (261)
Q Consensus 6 sVNidhiAtLRnaRg~~~P---~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p--~ 80 (261)
-+=+||=..+.+.-|...| |+-.....+...|+++|.+++. .+..... +.+.+.+...- +
T Consensus 20 ilA~Dh~~~~~~~~~~~~~~~~d~~~l~~~a~~~~~~~i~~~~g------------~~~~~~~---~~~~~~~~v~~~~~ 84 (263)
T 1w8s_A 20 ILAYDHGIEHGPADFMDNPDSADPEYILRLARDAGFDGVVFQRG------------IAEKYYD---GSVPLILKLNGKTT 84 (263)
T ss_dssp EEECCHHHHTCGGGGSSSGGGGCHHHHHHHHHHHTCSEEEECHH------------HHHHHCC---SSSCEEEECEECCT
T ss_pred EEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEECHH------------HHHHHCC---CCCCEEEEEECCCC
T ss_conf 99667776548634353710229899999998629985431734------------8986223---56670799704554
Q ss_pred ------HH----HHHHHHHHCCCEE-EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---------
Q ss_conf ------68----9999985072128-971016555333578221333788999998620269638997254---------
Q gi|254780438|r 81 ------ET----FLNLCERYKPEQI-TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG--------- 140 (261)
Q Consensus 81 ------~e----~i~ia~~ikP~qv-tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp--------- 140 (261)
.+ -++-+.+.-.+-| |+|.=.++. -......+..+++.++..|+.+=+-+-|
T Consensus 85 ~~~~~~~~~~~~~ve~a~~~Gadav~~~v~~g~d~--------~~~~~~~l~~v~~~a~~~g~~~ile~~~~~~~~~~~~ 156 (263)
T 1w8s_A 85 LYNGEPVSVANCSVEEAVSLGASAVGYTIYPGSGF--------EWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNET 156 (263)
T ss_dssp TCCSSCCCEESSCHHHHHHTTCSEEEEEECTTSTT--------HHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTT
T ss_pred CCCCCCHHHHHCCHHHHHHHHHCCEEEEECCCCCH--------HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
T ss_conf 44662022310579999842221516884489960--------6999999999999999829908998763267656777
Q ss_pred --CCCCHHHHHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH-HHHHH--HHC
Q ss_conf --444147999974066146511-211102444356433666889998766541562352078989877-99999--736
Q gi|254780438|r 141 --NGNEHSLQAAKLTGADCIELY-TGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQN-IPNLI--NAI 214 (261)
Q Consensus 141 --d~~q~~i~~a~~~Gad~VElh-TG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~N-l~~~i--~~I 214 (261)
+.-....+.+.++|+|.+.+. +|+-. .+.+....+....+-+-.|=...-.. ...+. +.-
T Consensus 157 ~~d~i~~a~r~a~elGaD~~Kv~~~~~~e--------------~~~~~~~~~~~~~v~~~GG~~~~~~~~~~~~~~~a~~ 222 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIKYTGDPK--------------TFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLE 222 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCSSHH--------------HHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCCCHH--------------HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 87999999999998589889843799889--------------9999998536760788428888988999999999998
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9963884259999999994099999999999974
Q gi|254780438|r 215 PYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 215 p~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
+.-.=+-+|-+|--+.= -....+.+.+++.+
T Consensus 223 ~Ga~G~~vGR~i~q~~~---p~~~~~~l~~ivh~ 253 (263)
T 1w8s_A 223 AGALGIAVGRNVWQRRD---ALKFARALAELVYG 253 (263)
T ss_dssp TTCCEEEESHHHHTSTT---HHHHHHHHHHHHC-
T ss_pred CCCEEEEECCHHHCCCC---HHHHHHHHHHHHCC
T ss_conf 79969972514346777---99999999999909
No 135
>>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural genomics of infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A (A:1-270)
Probab=48.59 E-value=8.7 Score=19.56 Aligned_cols=200 Identities=11% Similarity=-0.012 Sum_probs=106.9
Q ss_pred HHHHHHHCCCCCCCC------HHHHHHHHHHCCCCEEEE--------ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 432232207886899------899999999749989998--------247883348889999988740001367415888
Q gi|254780438|r 11 AVAVLRNRRNLPWPN------LVHIGKIALQSGASGLTV--------HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIE 76 (261)
Q Consensus 11 hiAtLRnaRg~~~P~------~~~~a~~~~~~GadgITv--------H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiE 76 (261)
...+||+--....|- -...|.++.++|.|.+-+ +..+|..=+..+++......+... ...|+...
T Consensus 17 ~~~~lr~~l~~~~~~~~~~~~d~~~A~~~~~~g~d~i~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~i~~~-~~~p~ivd 95 (270)
T 3ih1_A 17 LANRFRALVEANEILQIPGAHDAXAALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRA-TDLPVLVD 95 (270)
T ss_dssp HHHHHHHHHHSSSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHH-HCCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEE
T ss_conf 99999999827997898278788999999985999999857999985899998746799999999999864-28975887
Q ss_pred E---CCCH-H---HHHHHHHHCCCEEEEEECCCCCCCCCCCC-CHHHHHHHHHHHHHHHCCC-CCEEEEEECC----CCC
Q ss_conf 3---4856-8---99999850721289710165553335782-2133378899999862026-9638997254----444
Q gi|254780438|r 77 G---YPNE-T---FLNLCERYKPEQITLVPDDPHQLTSDHGW-DFLQNQALLTKTVARLHNL-GSRISLFADG----NGN 143 (261)
Q Consensus 77 g---~p~~-e---~i~ia~~ikP~qvtLVPe~r~elTTegGl-dv~~~~~~L~~~i~~l~~~-girvSLFIDp----d~~ 143 (261)
+ .-++ . ....+.+.--+.+.|=---+..-+..++- .+....+.+..+...+... +..|..=.|. +.+
T Consensus 96 ~~~g~~~~~~~~~~a~~~~~~Ga~~I~ie~~~~~~~~~~~~g~~li~~~~~~~~i~aa~~~~~~~~v~art~~~~~~~~~ 175 (270)
T 3ih1_A 96 IDTGFGGVLNVARTAVEXVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLD 175 (270)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCHH
T ss_conf 88899988999999999997597089723355655445656654415999999999999738982899844342034689
Q ss_pred --CHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE---CCC-CCHHHHHHHHHHCCCC
Q ss_conf --1479999740661465112111024443564336668899987665415623520---789-8987799999736996
Q gi|254780438|r 144 --EHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINA---GHD-LTIQNIPNLINAIPYI 217 (261)
Q Consensus 144 --q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA---GHg-Ln~~Nl~~~i~~Ip~I 217 (261)
..-.++..+.|+|.+.+|--+--.. ++.+ +..+.+-|.+ |=+ -...++.. +.. -+.
T Consensus 176 ~~i~r~~a~~eaGa~~i~~~~~~~~e~----------~~~i------~~~v~iPv~~~~~~~~~~~~~~~~~-l~~-~G~ 237 (270)
T 3ih1_A 176 EAIERANAYVKAGADAIFPEALQSEEE----------FRLF------NSKVNAPLLANXTEFGKTPYYSAEE-FAN-XGF 237 (270)
T ss_dssp HHHHHHHHHHHHTCSEEEETTCCSHHH----------HHHH------HHHSCSCBEEECCTTSSSCCCCHHH-HHH-TTC
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCHHH----------HHHH------HHHCCCCEEEEECCCCCCCCCCHHH-HHH-CCC
T ss_conf 999999999983987999637899999----------9999------9764998799846889998999999-998-699
Q ss_pred EEEEEHHHHHHH
Q ss_conf 388425999999
Q gi|254780438|r 218 SEISVGHAFAAT 229 (261)
Q Consensus 218 ~EvsIGHaiIse 229 (261)
+-+++|.+...-
T Consensus 238 ~~v~~~~~~~~~ 249 (270)
T 3ih1_A 238 QXVIYPVTSLRV 249 (270)
T ss_dssp SEEEECSHHHHH
T ss_pred CEEEECHHHHHH
T ss_conf 999981699999
No 136
>>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3gay_A* 3gak_A* 3gb6_A* (A:)
Probab=48.47 E-value=21 Score=16.98 Aligned_cols=186 Identities=12% Similarity=0.087 Sum_probs=121.2
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH-HHH-HHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 9999999749989998247883348889999-988-74000136741588834856899999850721289710165553
Q gi|254780438|r 28 HIGKIALQSGASGLTVHPRPDQRHIRYTDLP-EIR-RLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQL 105 (261)
Q Consensus 28 ~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~-~l~-~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~el 105 (261)
.+..-|++.++.-|--.-..-..+.-...+. .+. .+.....-.+=+++-=..+.+.+..+++.-=+.|-+=-
T Consensus 33 avi~AAe~~~sPvIlq~~~~~~~~~~~~~~~~~~~~~~A~~~~VPValHLDH~~~~e~i~~ai~~GftSVMiDg------ 106 (323)
T 2isw_A 33 GIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDA------ 106 (323)
T ss_dssp HHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEECC------
T ss_pred HHHHHHHHHCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEC------
T ss_conf 99999999399899885846786778477999999999975899889935876679999999754885688507------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCEE-----------------EEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 33578221333788999998620269638-----------------9972544441479999740661465112111024
Q gi|254780438|r 106 TSDHGWDFLQNQALLTKTVARLHNLGSRI-----------------SLFADGNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 106 TTegGldv~~~~~~L~~~i~~l~~~girv-----------------SLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
--+++..|-..-+++++..+..|+-| ++|-|| +| ..+...++|+|+.=+=-|.---.
T Consensus 107 ---S~lp~eeNi~~T~evv~~ah~~gv~VEaElG~igg~e~~~~~~~~~T~p--e~-a~~Fv~~TgvD~LAvaiGt~HG~ 180 (323)
T 2isw_A 107 ---SHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEP--QD-AKKFVELTGVDALAVAIGTSHGA 180 (323)
T ss_dssp ---TTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCH--HH-HHHHHHHHCCSEEEECSSCCSSS
T ss_pred ---CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCH--HH-HHHHHHCCCCCHHHHHHHHHHCC
T ss_conf ---8797698999999999864445714898655226866656555557898--99-99997156876113346666146
Q ss_pred HHH-----HHHHHHHHHHHHHHH-----------------HHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 443-----564336668899987-----------------6654156235207898987799999736996388425999
Q gi|254780438|r 169 YNN-----PQQERIFLNKLAITA-----------------QLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 169 ~~~-----~~~~~~el~~i~~aa-----------------~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
|.. ++-.-.-|+.|.+.. ......|...|-++|+.-+.+...++ .+|.-+||+-.+
T Consensus 181 Yk~~~~~~p~L~~~~l~~I~~~~~~PLVLHGgS~~p~~~~~~~~~~gg~lhg~~G~~~e~i~kai~--~GI~KiNi~T~l 258 (323)
T 2isw_A 181 YKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIG--EGVCKINVDSDS 258 (323)
T ss_dssp BCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHH--TTEEEEEECHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--CCCEEECCCHHH
T ss_conf 677888744567999998765149764346777775026777653154234678998999999998--698787325499
Q ss_pred H
Q ss_conf 9
Q gi|254780438|r 227 A 227 (261)
Q Consensus 227 I 227 (261)
-
T Consensus 259 ~ 259 (323)
T 2isw_A 259 R 259 (323)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 137
>>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} (A:542-645)
Probab=48.45 E-value=21 Score=16.97 Aligned_cols=61 Identities=13% Similarity=0.203 Sum_probs=45.9
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+.|.+|.+||=..+. .......+...|++.|++|-+......-.+.++.|...|+..+=+-
T Consensus 2 laP~~v~ii~i~~~~-----------~~~~a~~l~~~Lr~~gi~v~~d~~~~~l~k~~~~a~~~g~~~~iii 62 (104)
T 1nyr_A 2 LAPKQVQIIPVNVDL-----------HYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVV 62 (104)
T ss_dssp TCSSCEEEEESSHHH-----------HHHHHHHHHHHHHTTTCCEEECCSSCCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCEEEEEECCCHH-----------HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 088438999558547-----------8999999999999789889998999997599999986699999999
No 138
>>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 2hl1_A* (A:)
Probab=48.31 E-value=21 Score=16.96 Aligned_cols=49 Identities=12% Similarity=0.198 Sum_probs=33.4
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 999974066146511211102444356433666889998766541562352
Q gi|254780438|r 147 LQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQIN 197 (261)
Q Consensus 147 i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~Vn 197 (261)
.+.|.++++++|=|| |||++-.+...-....+-++..-..-.+.|++|.
T Consensus 65 ~~~a~kv~~~~ivlY--PyAHLSs~La~P~~A~~iL~~le~~L~~~g~eV~ 113 (143)
T 2hl0_A 65 SKVAEQVKAENVFVY--PFAHLSSELAKPSVAMDILNRVYQGLKERGFNVG 113 (143)
T ss_dssp HHHHHHHTCCEEEEE--ECGGGCSSBCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCEEEEE--CCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 999985399779993--6022058768858999999999999975896599
No 139
>>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A (A:539-693)
Probab=48.12 E-value=21 Score=16.94 Aligned_cols=64 Identities=9% Similarity=0.024 Sum_probs=45.3
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 85072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 88 ERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 88 ~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
-.+.|.||+++|-..++- .......+...|++.|++|-+-.....-.+.+..|...|+..+=+-
T Consensus 17 ~~iaP~qv~i~~i~~~~e----------~~~~a~~i~~~Lr~~gi~v~~d~~~~slgkk~~~a~~~g~p~~iii 80 (155)
T 2zt5_A 17 AVVAPFKCSVLPLSQNQE----------FMPFVKELSEALTRHGVSHKVDDSSGSIGRRYARTDEIGVAFGVTI 80 (155)
T ss_dssp TTTSSCSEEEEESCCSTT----------THHHHHHHHHHHHHTTCCEEECCCCSCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCEEEEEECCCCCC----------HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCEEEEE
T ss_conf 875883799996866802----------6999999999999759958975499985677642301379869999
No 140
>>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} (A:1-234)
Probab=47.71 E-value=21 Score=16.90 Aligned_cols=171 Identities=10% Similarity=-0.015 Sum_probs=72.5
Q ss_pred HHHHHHHCCCCCCCCH------HHHHHHHHHCCCCEEEE--------ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 4322322078868998------99999999749989998--------247883348889999988740001367415888
Q gi|254780438|r 11 AVAVLRNRRNLPWPNL------VHIGKIALQSGASGLTV--------HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIE 76 (261)
Q Consensus 11 hiAtLRnaRg~~~P~~------~~~a~~~~~~GadgITv--------H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiE 76 (261)
...+||+--....|=. .-.|+++.++|.+.|-+ +-.||- +
T Consensus 22 ~~~~lr~~~~~~~~i~~~~~~D~~sA~i~~~~g~~ai~~s~~~~a~~~G~~D~--------------------------~ 75 (234)
T 1oy0_A 22 RTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTT--------------------------V 75 (234)
T ss_dssp CHHHHHHHHHHTCCEEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSS--------------------------S
T ss_pred CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEECCCHHHHHCCCCCC--------------------------C
T ss_conf 69999999867994899956899999999975998899767448640577677--------------------------7
Q ss_pred ECCCHHHHHHHHHHCC-CEEE-EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHC
Q ss_conf 3485689999985072-1289-71016555333578221333788999998620269638997254444-1479999740
Q gi|254780438|r 77 GYPNETFLNLCERYKP-EQIT-LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN-EHSLQAAKLT 153 (261)
Q Consensus 77 g~p~~e~i~ia~~ikP-~qvt-LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~-q~~i~~a~~~ 153 (261)
..+.++|+..+..+.- .+.. ++.|- |.|..-..+...+...++.+.+.|.- .+.|+.... .+......+.
T Consensus 76 ~l~~~e~~~~~~~i~~~~~~~~iiaD~------~~G~~~~~~~~~v~~~v~~l~~aGa~-gi~iED~~~~~~~~~~~~~~ 148 (234)
T 1oy0_A 76 PISIDELIPLVRGVVRGAPHALVVADL------PFGSYEAGPTAALAAATRFLKDGGAH-AVKLEGGERVAEQIACLTAA 148 (234)
T ss_dssp SCCGGGTHHHHHHHHHHCTTSEEEEEC------CTTSSTTCHHHHHHHHHHHHHTTCCS-EEEEEBSGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCEEEECC------CCCCCCCCHHHHHHHHHHHHHHHCCC-EEECCCCHHHHHHHHHHHHC
T ss_conf 678899999999997378765378436------65344779999999999999974345-45546747599999999987
Q ss_pred CCCEEEECCCCCH---HHHHHHHH--HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 6614651121110---24443564--33666889998766541562352078989877999997369
Q gi|254780438|r 154 GADCIELYTGPYG---ACYNNPQQ--ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIP 215 (261)
Q Consensus 154 Gad~VElhTG~Ya---~a~~~~~~--~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip 215 (261)
+ -.++-|-|... ++..+-.- ....+....+-++...+.|-.+=--||+.-+-+..+..+++
T Consensus 149 ~-i~~~~~~~~~~~~~~a~~d~~i~aRtda~~~~i~ra~~y~eAGAd~i~i~g~~~e~~~~~~~~~~ 214 (234)
T 1oy0_A 149 G-IPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVPAELATQITGKLT 214 (234)
T ss_dssp T-CCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHCS
T ss_pred C-CCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCC
T ss_conf 9-96675203673552336864203507888899999999983888188763571889999986178
No 141
>>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid biosynthesis, cytoplasm, lysine biosynthesis; HET: AKG; 1.80A {Thermus thermophilus HB27} PDB: 2ztk_A* (A:1-277)
Probab=47.11 E-value=22 Score=16.84 Aligned_cols=179 Identities=15% Similarity=0.093 Sum_probs=119.3
Q ss_pred CCHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 99899999999749989998-24788334888999998874000136741588834856899999850721289710165
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDP 102 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r 102 (261)
-+.++.+....++|.+.|-+ +|.-.+-.. .....+... ..+...+.-..+..+.++.+....-..+.++.-..
T Consensus 25 ~~~~~i~~~l~~~Gv~~iE~g~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~s 98 (277)
T 2ztj_A 25 QDKVEIAKALDEFGIEYIEVTTPVASPQSR--KDAEVLASL----GLKAKVVTHIQCRLDAAKVAVETGVQGIDLLFGTS 98 (277)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTSCHHHH--HHHHHHHTS----CCSSEEEEEEESCHHHHHHHHHTTCSEEEEEECC-
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHH--HHHHHHHHC----CCCCCCEEEHEECCCHHHHHHHCCCEEEEEEECCC
T ss_conf 999999999998298989997874787789--999999862----88632201000265145667752750589971364
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC----C---CHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHH
Q ss_conf 5533357822133378899999862026963899725444----4---14799997406614651-12111024443564
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG----N---EHSLQAAKLTGADCIEL-YTGPYGACYNNPQQ 174 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~----~---q~~i~~a~~~Gad~VEl-hTG~Ya~a~~~~~~ 174 (261)
...-.-.+++.....+.+.+.++..++.|..|+..+.... + ...+..+.+.|+|+|-| =|--++ .|.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~v~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~~----~P~~ 174 (277)
T 2ztj_A 99 KYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPYVDRVGLADTVGVA----TPRQ 174 (277)
T ss_dssp -------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGGCSEEEEEETTSCC----CHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHH----CCHH
T ss_conf 898887664699999999999999997277505775012244454211013321012431146751533331----0010
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
Q ss_conf 33666889998766541562352078989877999997
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLIN 212 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~ 212 (261)
....++.+++...--..+|+-.|--=||-.-|...-+.
T Consensus 175 ~~~li~~l~~~~~~~~~l~~H~Hn~~Gla~An~laAi~ 212 (277)
T 2ztj_A 175 VYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIE 212 (277)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
T ss_conf 68899999986055776026505067667677999876
No 142
>>3fem_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, synthase, biosynthetic protein, transferase; 3.02A {Saccharomyces cerevisiae} (A:)
Probab=47.11 E-value=22 Score=16.84 Aligned_cols=54 Identities=15% Similarity=-0.028 Sum_probs=40.5
Q ss_pred HHHHHHHCCCCC--CCCHHHHHHHHHHCCCCEEEEECCC---------CCCCCCHHHHHHHHHHH
Q ss_conf 432232207886--8998999999997499899982478---------83348889999988740
Q gi|254780438|r 11 AVAVLRNRRNLP--WPNLVHIGKIALQSGASGLTVHPRP---------DQRHIRYTDLPEIRRLI 64 (261)
Q Consensus 11 hiAtLRnaRg~~--~P~~~~~a~~~~~~GadgITvH~R~---------DrRHI~~~Dv~~l~~~~ 64 (261)
++-.+..-||+. .-+.++.|...+++|+.++|+|.|- ..|....+++..+++.+
T Consensus 9 ~~pv~~kirgg~~vs~qa~~~a~~~e~aG~~~i~~h~rt~a~~~~~~~~~~~~~~~~Ik~ik~~~ 73 (297)
T 3fem_A 9 KSGLAQMLKGGVIMDVVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSV 73 (297)
T ss_dssp HHHHHHTTTTCEEEEESSHHHHHHHHTTTCSEEEECSSCHHHHTTSCSCCCCCCHHHHHHHHTSC
T ss_pred HHHHHHHHCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHCC
T ss_conf 76599995498788837899999888617537875435758787346811058879999998626
No 143
>>3i10_A Putative glycerophosphoryl diester phosphodiesterase; NP_812074.1, structural genomics; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} (A:1-65,A:105-278)
Probab=46.39 E-value=22 Score=16.76 Aligned_cols=77 Identities=12% Similarity=0.091 Sum_probs=54.2
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCEEEEECC--CCC----CCCCHHHHHHHHHHHCCCCCCCEEEEEECCC--HHHHHHH
Q ss_conf 2207886899899999999749989998247--883----3488899999887400013674158883485--6899999
Q gi|254780438|r 16 RNRRNLPWPNLVHIGKIALQSGASGLTVHPR--PDQ----RHIRYTDLPEIRRLIDEQFPKAELNIEGYPN--ETFLNLC 87 (261)
Q Consensus 16 RnaRg~~~P~~~~~a~~~~~~GadgITvH~R--~Dr----RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia 87 (261)
|-+++..-.|-+.+-..|.+.|+|+|-+-.+ -|. .|=+-+|+..+.+ .++.||||.-.. +.+++++
T Consensus 24 rg~~~~~~e~t~~~~~~~~~~~~~~~e~dv~~t~d~~~~~~hPTL~EvL~~~~------~~i~i~iEiK~~~~~~v~~li 97 (239)
T 3i10_A 24 RGNWRSAPENSTAAIDSAIAXKVDIVEIDIQKTKDGQLILXHPTLEEALLTAK------GKIXVNLDKAYDIFDDVYAIL 97 (239)
T ss_dssp TSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCBHHHHHHHHT------TTSEEEEESCGGGHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHC------CCCCCEEEECCCHHHHHHHHH
T ss_conf 99899998431999999998598989987899359978995186999998740------343424784353267899998
Q ss_pred HHHC-CCEEEEE
Q ss_conf 8507-2128971
Q gi|254780438|r 88 ERYK-PEQITLV 98 (261)
Q Consensus 88 ~~ik-P~qvtLV 98 (261)
.+.. +++|++-
T Consensus 98 ~~~g~~~~V~~~ 109 (239)
T 3i10_A 98 EKTETQNQVIXK 109 (239)
T ss_dssp HHHTCGGGEEEE
T ss_pred HHHCCCCCEEEE
T ss_conf 750866768999
No 144
>>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A (A:1-138)
Probab=46.28 E-value=22 Score=16.75 Aligned_cols=102 Identities=9% Similarity=0.034 Sum_probs=67.5
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH---HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 34888999998874000136741588834856---899999850721289710165553335782213337889999986
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE---TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVAR 126 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~---e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~ 126 (261)
|-++++|...+.++....+ .-+..+.+ .+......-.|..+++|-+..+++..-.++-...+... .
T Consensus 24 r~~~~~D~~~i~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivg~~~~~~~~~~~~------~ 92 (138)
T 3i3g_A 24 RVLEESDLSSHLELLGHLT-----EAPPLSGVELANIADMRRRAGIVTKVFCHQPTGRIVGSASLMIQPKFTR------G 92 (138)
T ss_dssp EECCGGGHHHHHHHHTTTS-----CCCCCCHHHHHHHHHHHHHTTCEEEEEEETTTTEEEEEEEEEEECCSSG------G
T ss_pred EECCHHHHHHHHHHHHHHH-----CCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCCC------C
T ss_conf 9798899999999999984-----1799998999999999864898349999961998999999860467667------8
Q ss_pred HCCCCCEEEEEECCCCCC---------HHHHHHHHCCCCEEEECC
Q ss_conf 202696389972544441---------479999740661465112
Q gi|254780438|r 127 LHNLGSRISLFADGNGNE---------HSLQAAKLTGADCIELYT 162 (261)
Q Consensus 127 l~~~girvSLFIDpd~~q---------~~i~~a~~~Gad~VElhT 162 (261)
-...+--.+++|+|+--. ..++.|++.|+++|.|+|
T Consensus 93 ~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~t 137 (138)
T 3i3g_A 93 GRAVGHIEDVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDS 137 (138)
T ss_dssp GCCEEEEEEEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 874899954412987737881699999999999987993999925
No 145
>>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} (A:)
Probab=46.12 E-value=17 Score=17.56 Aligned_cols=63 Identities=10% Similarity=0.024 Sum_probs=33.0
Q ss_pred HHHHHHHHHHCCCEEEECCCC---CHHHHHHHHHH-CCC--------------CEEEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999876654156235207898---98779999973-699--------------638842599999999940999999999
Q gi|254780438|r 182 LAITAQLAQKMDLQINAGHDL---TIQNIPNLINA-IPY--------------ISEISVGHAFAATALECGVKEAVFCFR 243 (261)
Q Consensus 182 i~~aa~~A~~lgL~VnAGHgL---n~~Nl~~~i~~-Ip~--------------I~EvsIGHaiIseAl~~GL~~aI~~~~ 243 (261)
+......|...|+.+..=--| +-.--..++.+ -+. ..=+-+|-.+....-|.-+.+=|++|.
T Consensus 365 V~QV~~aa~~~Gv~vaGENAL~~~d~~~y~qi~~~~~~~~~~~~~~~~~~~~~FTyLRm~~~lf~~~n~~~F~~FVr~M~ 444 (498)
T 1fa2_A 365 VQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLKLRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMH 444 (498)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCCCTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCEEEECCCHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHHHHHHHC
T ss_conf 99999999981996563234343275789999986211137778887666015776178857759230889999999834
Q ss_pred H
Q ss_conf 9
Q gi|254780438|r 244 R 244 (261)
Q Consensus 244 ~ 244 (261)
.
T Consensus 445 ~ 445 (498)
T 1fa2_A 445 A 445 (498)
T ss_dssp T
T ss_pred C
T ss_conf 6
No 146
>>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} (A:)
Probab=46.10 E-value=22 Score=16.73 Aligned_cols=124 Identities=12% Similarity=0.140 Sum_probs=75.5
Q ss_pred CCCCCCCCHH---HHHHHHHHCCCCEEEEEC---CCCCCCCCHHH-HHHHHHHHCC--CCCCCEEEEEEC----------
Q ss_conf 0788689989---999999974998999824---78833488899-9998874000--136741588834----------
Q gi|254780438|r 18 RRNLPWPNLV---HIGKIALQSGASGLTVHP---RPDQRHIRYTD-LPEIRRLIDE--QFPKAELNIEGY---------- 78 (261)
Q Consensus 18 aRg~~~P~~~---~~a~~~~~~GadgITvH~---R~DrRHI~~~D-v~~l~~~~~~--~~~~~elNiEg~---------- 78 (261)
.+++.+-++- +.|......|||=|.+.. ||+-+-+..+. +..+..++.. ...++++-|.-.
T Consensus 29 ~~~~~~~d~e~~~~~a~~~~~~GAdiIDig~~st~p~~~~v~~~~E~~rl~~~i~~i~~~~~~piSIDT~~~~v~~~al~ 108 (282)
T 1aj0_A 29 SDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAK 108 (282)
T ss_dssp CCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
T ss_conf 89986779999999999999879979987781345666677688999989999999863355237887247377899973
Q ss_pred ------------CCHHHHHHHHHHCCCEEEEEECCCC----CCCCCCCCCHHHHHHHHHHHHHHHCCCCCE-EEEEECCC
Q ss_conf ------------8568999998507212897101655----533357822133378899999862026963-89972544
Q gi|254780438|r 79 ------------PNETFLNLCERYKPEQITLVPDDPH----QLTSDHGWDFLQNQALLTKTVARLHNLGSR-ISLFADGN 141 (261)
Q Consensus 79 ------------p~~e~i~ia~~ikP~qvtLVPe~r~----elTTegGldv~~~~~~L~~~i~~l~~~gir-vSLFIDpd 141 (261)
..++|++++.++.+..|++--+... +.+.-.- .+..-..+++..+..+.+.|+. -.+.+||.
T Consensus 109 ~G~diINsi~~~~~~~~~~l~~~~~~~vVlm~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Gi~~~~IiiDPg 187 (282)
T 1aj0_A 109 VGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDD-VFAEVNRYFIEQIARCEQAGIAKEKLLLDPG 187 (282)
T ss_dssp TTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSC-HHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred CCCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 596598423431114667776436940897405799754445885310-2355678998888899874985987536888
Q ss_pred C
Q ss_conf 4
Q gi|254780438|r 142 G 142 (261)
Q Consensus 142 ~ 142 (261)
.
T Consensus 188 ~ 188 (282)
T 1aj0_A 188 F 188 (282)
T ss_dssp T
T ss_pred C
T ss_conf 6
No 147
>>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} (A:1-337)
Probab=46.09 E-value=19 Score=17.16 Aligned_cols=58 Identities=12% Similarity=0.003 Sum_probs=35.6
Q ss_pred HHHHHHHCCCEEEEEECCCCC--------CCCCCCCCH--------HHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 999985072128971016555--------333578221--------3337889999986202696389972544
Q gi|254780438|r 84 LNLCERYKPEQITLVPDDPHQ--------LTSDHGWDF--------LQNQALLTKTVARLHNLGSRISLFADGN 141 (261)
Q Consensus 84 i~ia~~ikP~qvtLVPe~r~e--------lTTegGldv--------~~~~~~L~~~i~~l~~~girvSLFIDpd 141 (261)
+....+.--+.+-|-|--... -++.+|.++ ....+.++..|+.+++.|++|=+=+-++
T Consensus 43 L~yl~~LGv~~i~L~P~~~~~~~~~~g~~~~~~~gy~~~~~~v~~~~Gt~~d~~~lv~~~H~~Gi~vi~D~V~N 116 (337)
T 1gcy_A 43 AATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPN 116 (337)
T ss_dssp HHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEC
T ss_conf 89999739988990957145677887776888677572007458678999999999999988799899987314
No 148
>>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} (A:)
Probab=46.02 E-value=22 Score=16.73 Aligned_cols=186 Identities=12% Similarity=0.000 Sum_probs=102.9
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC----EEEEEECCCH-------H----HHHHHH
Q ss_conf 998999999997499899982478833488899999887400013674----1588834856-------8----999998
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKA----ELNIEGYPNE-------T----FLNLCE 88 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~----elNiEg~p~~-------e----~i~ia~ 88 (261)
.++.+.+..+...|+++|.++|.==++- .......-..+ .++.-+..+. + =++-++
T Consensus 48 ~~~~~~~~~a~~~~~~~v~v~~~~~~~~---------~~~~~~~~~~v~~~i~~~~~~~~~~~~g~~~~~~~~~~ve~a~ 118 (304)
T 1to3_A 48 TDFKVNAAKILSPYASAVLLDQQFCYRQ---------AVEQNAVAKSCAXIVAADDFIPGNGIPVDNVVLDKKINAQAVK 118 (304)
T ss_dssp HHHHHHHHHHHGGGCSEEEECTTTTHHH---------HHHTTCSCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECHHHHHHH---------HHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 9999999986205585567756776888---------8740034788069998457646888764432444556899998
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCH--HHHHHHHHHHHHHHCCCCCEEEEEECC------------CCCCHHHHHHHHCC
Q ss_conf 5072128971016555333578221--333788999998620269638997254------------44414799997406
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDF--LQNQALLTKTVARLHNLGSRISLFADG------------NGNEHSLQAAKLTG 154 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv--~~~~~~L~~~i~~l~~~girvSLFIDp------------d~~q~~i~~a~~~G 154 (261)
+.-.+-|-+|-- -|.+- ......++.+++.++..|+.+=+=+-| +.-....+.+.++|
T Consensus 119 ~~GAd~v~~~~~--------~g~~~~~~~~~~~i~~v~~~~~~~g~~vile~i~~~~~~~d~~~~~~~i~~a~~~a~e~G 190 (304)
T 1to3_A 119 RDGAKALKLLVL--------WRSDEDAQQRLNXVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSG 190 (304)
T ss_dssp HTTCCEEEEEEE--------ECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSS
T ss_pred HCCCCEEEEEEE--------CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 638888999862--------487656999999999999999873997389873147776765540889999999876439
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEECCCCCHHHHHHHH--HHCCCCEEEEEHHHHHHHHH
Q ss_conf 61465112111024443564336668899987665415623-5207898987799999--73699638842599999999
Q gi|254780438|r 155 ADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQ-INAGHDLTIQNIPNLI--NAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 155 ad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~-VnAGHgLn~~Nl~~~i--~~Ip~I~EvsIGHaiIseAl 231 (261)
+|.|-.+||.....- .. + .+....+.....++. +-+|=+-+.+-....+ +.-.+..=+.+|-+|.-++.
T Consensus 191 aD~iKt~~~~~~~~~-~~-~------~v~~~~~~~~~~~~pv~vaGG~~~~~~~~~~i~~a~~~Ga~G~~~GR~i~~~~~ 262 (304)
T 1to3_A 191 ADLYKVEXPLYGKGA-RS-D------LLTASQRLNGHINXPWVILSSGVDEKLFPRAVRVAXEAGASGFLAGRAVWSSVI 262 (304)
T ss_dssp CSEEEECCGGGGCSC-HH-H------HHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGGT
T ss_pred CEEEEEECCCCCHHH-HH-H------HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCC
T ss_conf 769994078760456-67-8------999999987258996899928989899999999999679939985636434822
Q ss_pred HHH
Q ss_conf 940
Q gi|254780438|r 232 ECG 234 (261)
Q Consensus 232 ~~G 234 (261)
-..
T Consensus 263 ~~~ 265 (304)
T 1to3_A 263 GLP 265 (304)
T ss_dssp TCS
T ss_pred CCC
T ss_conf 561
No 149
>>2wc7_A Alpha amylase, catalytic region; debranching enzyme, CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullulanse; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A (A:1-400)
Probab=44.88 E-value=23 Score=16.61 Aligned_cols=64 Identities=11% Similarity=0.070 Sum_probs=43.3
Q ss_pred HHHCCCCCCCCHHHHHHHHHHCCCCEEEEECC----------------CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf 32207886899899999999749989998247----------------88334888999998874000136741588834
Q gi|254780438|r 15 LRNRRNLPWPNLVHIGKIALQSGASGLTVHPR----------------PDQRHIRYTDLPEIRRLIDEQFPKAELNIEGY 78 (261)
Q Consensus 15 LRnaRg~~~P~~~~~a~~~~~~GadgITvH~R----------------~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~ 78 (261)
..+.-|+++-.+.+-..-..+.|+..|=+-|= .|.|.-+.+|+..|.+.+.++ ++.+=+.+-
T Consensus 47 ~~~~~~G~~~gi~~~Ldyl~~lGv~~I~l~Pi~~~~~~~gY~~~d~~~vd~~~Gt~~dlk~lv~~~H~~--Gi~VilD~V 124 (400)
T 2wc7_A 47 LQGYKGGDLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQR--NIKVVLDGV 124 (400)
T ss_dssp HHC-CCCCHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CEEEEECCC
T ss_conf 588886589999985799987799889959897189989988667767584338859999999765434--559995666
Q ss_pred CC
Q ss_conf 85
Q gi|254780438|r 79 PN 80 (261)
Q Consensus 79 p~ 80 (261)
++
T Consensus 125 ~N 126 (400)
T 2wc7_A 125 FN 126 (400)
T ss_dssp CS
T ss_pred CC
T ss_conf 55
No 150
>>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} (A:)
Probab=44.49 E-value=24 Score=16.57 Aligned_cols=153 Identities=11% Similarity=0.094 Sum_probs=63.3
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC------CHHHHHHHHCCCCEEE
Q ss_conf 9985072128971016555333578221333788999998620269638997254444------1479999740661465
Q gi|254780438|r 86 LCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN------EHSLQAAKLTGADCIE 159 (261)
Q Consensus 86 ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~------q~~i~~a~~~Gad~VE 159 (261)
......++.+.++...+. ...++... ....+..+.........-+.+.+.+... ...-..+.+.|+|.|-
T Consensus 93 ~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~i~ 168 (260)
T 1p1x_A 93 AAIAYGADEVDVVFPYRA---LMAGNEQV-GFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp HHHHHTCSEEEEECCHHH---HHTTCCHH-HHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHCCCCEEEEEECHHH---HHCCCHHH-HHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEE
T ss_conf 999859997898654698---85657899-99999999998524787069997445468089999999999971978797
Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHH
Q ss_conf 1121110244435643366688999876654156235207898-987799999736996388425999999999409999
Q gi|254780438|r 160 LYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAATALECGVKEA 238 (261)
Q Consensus 160 lhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~a 238 (261)
++++.......... ....+......+...++.|=|-=|. +.+-+.+.+. +. -+-|.||-+.+.. ...|-...
T Consensus 169 ~~~~~g~~~~~~~~----~~~~~~~i~~~~~~~~ipIia~GGI~~~~Dv~kal~-lG-Ad~V~iGt~~l~~-~e~~~~~~ 241 (260)
T 1p1x_A 169 TSTGKVAVNATPES----ARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA-IA-DELFGADWADARH-YRFGASSL 241 (260)
T ss_dssp CCCSCSSCCCCHHH----HHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH-HH-HHHHCTTSCSTTT-BCEEESTH
T ss_pred ECCCCCCCCCCHHH----HHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHH-HH-HHHHCCCCCCCCC-EEEEHHHH
T ss_conf 06887888999899----999999998754366532341678688999999999-99-8761710037787-77657787
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999741
Q gi|254780438|r 239 VFCFRRACGQH 249 (261)
Q Consensus 239 I~~~~~ii~~~ 249 (261)
++++++.+++.
T Consensus 242 v~~~~~~l~~~ 252 (260)
T 1p1x_A 242 LASLLKALGHG 252 (260)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHHCC
T ss_conf 99999998446
No 151
>>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} (A:1-268)
Probab=44.43 E-value=24 Score=16.56 Aligned_cols=51 Identities=8% Similarity=0.014 Sum_probs=26.5
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCC--CCCHHHHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 999999997499899982478833--48889999988740001367415888348
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPDQR--HIRYTDLPEIRRLIDEQFPKAELNIEGYP 79 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~DrR--HI~~~Dv~~l~~~~~~~~~~~elNiEg~p 79 (261)
..-......+|..-|-++.-.+-. .-.-+++..+-+.+..+ .+.+-+.+..
T Consensus 42 ~~~~~~~k~~G~N~vR~~~~~~~~~~~~~~~~l~~~i~~a~~~--Gi~vi~~~~~ 94 (268)
T 1wky_A 42 TTAIEGIANTGANTVRIVLSDGGQWTKDDIQTVRNLISLAEDN--NLVAVLEVHD 94 (268)
T ss_dssp HHHHHHHHTTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHT--TCEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC--CCEEEEECCC
T ss_conf 9999999977997899865688754761899999999999977--9999996487
No 152
>>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} (A:326-420)
Probab=44.36 E-value=24 Score=16.56 Aligned_cols=59 Identities=14% Similarity=0.046 Sum_probs=43.6
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEE
Q ss_conf 07212897101655533357822133378899999862026963899725444414799997406614651
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VEl 160 (261)
..|-||.++|-.. ...+.-..+...|++.|++|-+......-.+.++.|...|+..+=+
T Consensus 2 laP~~v~ii~~~~------------~~~~~a~~l~~~Lr~~gi~v~~d~~~~~~~k~l~~a~~~g~~~~ii 60 (95)
T 1qe0_A 2 EENLDLFIVTMGD------------QADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIV 60 (95)
T ss_dssp CCCCSEEEEECHH------------HHHHHHHHHHHHHHTTTCCEEECCSCCCHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCEEEEECCH------------HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 6676189982776------------9999999999999987996999349999999999999879799999
No 153
>>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} (A:)
Probab=44.11 E-value=12 Score=18.60 Aligned_cols=47 Identities=9% Similarity=0.170 Sum_probs=27.2
Q ss_pred EECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2078989877999997369963884259999999994099999999999974
Q gi|254780438|r 197 NAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 197 nAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
-++=+.++.|+..++. -+.+=+.+|-+|... -=-.+++++|++.+++
T Consensus 197 ~~~g~~~~~~~~~~~~--~Ga~~ivvGR~I~~a---~dp~~~~~~~~~~i~~ 243 (245)
T 1eix_A 197 EAGDQRRIMTPEQALS--AGVDYMVIGRPVTQS---VDPAQTLKAINASLQR 243 (245)
T ss_dssp CCTTCCSCBCHHHHHH--TTCSEEEECHHHHTS---SSHHHHHHHHHHHTC-
T ss_pred CCCCCCCCCCHHHHHH--CCCCEEEECHHHCCC---CCHHHHHHHHHHHHHH
T ss_conf 5488777479999998--599999989566179---9999999999999985
No 154
>>3l12_A Putative glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Silicibacter pomeroyi} (A:1-65,A:123-313)
Probab=43.93 E-value=24 Score=16.51 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=26.9
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEE
Q ss_conf 999998620269638997254444147999974066146
Q gi|254780438|r 120 LTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 120 L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~V 158 (261)
-..++..+++.|.+|..+---++++ ++.+.+.|+|.|
T Consensus 200 ~~~~v~~~~~~G~~v~~WTvn~~~~--~~~~~~~GVdgI 236 (256)
T 3l12_A 200 TPELVAEAHDLGLIVLTWTVNEPED--IRRXATTGVDGI 236 (256)
T ss_dssp CHHHHHHHHHTTCEEEEBCCCSHHH--HHHHHHHTCSEE
T ss_pred CHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHCCCCEE
T ss_conf 9999999998799899979998999--999986599999
No 155
>>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} (F:)
Probab=43.87 E-value=24 Score=16.51 Aligned_cols=205 Identities=10% Similarity=0.003 Sum_probs=103.6
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC-CCHHHHHHHHHHCC
Q ss_conf 23220788689989999999974998999824788334888999998874000136741588834-85689999985072
Q gi|254780438|r 14 VLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGY-PNETFLNLCERYKP 92 (261)
Q Consensus 14 tLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~-p~~e~i~ia~~ikP 92 (261)
.....+-....++.++|+.+.++|++.+.+=-..-..+-+..+...++...... .++...-+. .+.+....+.+...
T Consensus 21 ~~~g~~~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 98 (252)
T 1ka9_F 21 GVNFVNLRDAGDPVEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGA 98 (252)
T ss_dssp CCCSSCCSSTTCHHHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTC
T ss_pred CCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC--CCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 846882288889999999999869998999952343136744899999998624--984586376031888789987389
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE-----------------CCCCCCHHHHHHHHCCC
Q ss_conf 1289710165553335782213337889999986202696389972-----------------54444147999974066
Q gi|254780438|r 93 EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA-----------------DGNGNEHSLQAAKLTGA 155 (261)
Q Consensus 93 ~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFI-----------------Dpd~~q~~i~~a~~~Ga 155 (261)
+.+.+- --+.++..........+......+++.. ...........+...|+
T Consensus 99 ~~v~i~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~ 166 (252)
T 1ka9_F 99 DKVSVN------------SAAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGA 166 (252)
T ss_dssp SEEEEC------------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTC
T ss_pred CEEEEC------------CHHHHCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECEEECCCCHHHHHHHHHHCCC
T ss_conf 879988------------32431789999999863654338999864206765899982524379779999999986699
Q ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
Q ss_conf 14651121110244435643366688999876654156235207898-98779999973699638842599999999940
Q gi|254780438|r 156 DCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAATALECG 234 (261)
Q Consensus 156 d~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~G 234 (261)
+.+-+|--......... .. ..+ ...+...++-|=|+=|. +.+-+..+++ -+.+=|-||-++.....
T Consensus 167 ~~i~~~~~~~~~~~~~~-~~----~~i---~~~~~~~~ipvia~GGI~s~~D~~~~l~--~GadgV~iG~a~~~~~~--- 233 (252)
T 1ka9_F 167 GEILLTSMDRDGTKEGY-DL----RLT---RMVAEAVGVPVIASGGAGRMEHFLEAFQ--AGAEAALAASVFHFGEI--- 233 (252)
T ss_dssp CEEEEEETTTTTTCSCC-CH----HHH---HHHHHHCSSCEEEESCCCSHHHHHHHHH--TTCSEEEESHHHHTTSS---
T ss_pred CEEEEEEECCCCCCCCC-CH----HHH---HHHHHHCCCCEEEECCCCCHHHHHHHHH--CCCCEEEEEHHHHCCCC---
T ss_conf 88999854122666783-27----999---9998623885999768999999999997--89979998569886999---
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999974
Q gi|254780438|r 235 VKEAVFCFRRACGQ 248 (261)
Q Consensus 235 L~~aI~~~~~ii~~ 248 (261)
.+.+.++.+++
T Consensus 234 ---~~~~~~~~l~~ 244 (252)
T 1ka9_F 234 ---PIPKLKRYLAE 244 (252)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHH
T ss_conf ---99999999998
No 156
>>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek KEY, C-terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A (A:1-329)
Probab=43.18 E-value=24 Score=16.49 Aligned_cols=56 Identities=13% Similarity=0.054 Sum_probs=34.7
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHH---------HHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 99999850721289710165553335782213---------337889999986202696389972544
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFL---------QNQALLTKTVARLHNLGSRISLFADGN 141 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~---------~~~~~L~~~i~~l~~~girvSLFIDpd 141 (261)
.++-..+.-=+.|-|=|=-.. +.||.++. +..+.|+..|..+++.||+|=|=+-++
T Consensus 41 ~Ldyl~~LGv~aI~l~Pi~~~---~~hGY~~~d~~~idp~~Gt~~~lk~LV~~aH~~Gi~VilD~V~N 105 (329)
T 2dh2_A 41 RLDYLSSLKVKGLVLGPIHKN---QKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (329)
T ss_dssp THHHHHHTTCSEEEECCCEEE---CTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHHHCCCCEEEECCCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf 537998749998998998748---98998875863038456999999999999985067368757200
No 157
>>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} (A:)
Probab=42.67 E-value=25 Score=16.38 Aligned_cols=23 Identities=9% Similarity=0.124 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 78899999862026963899725
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFAD 139 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFID 139 (261)
..++..+|..+++.|++|-+-+-
T Consensus 113 ~~~~d~~i~~~~~~gi~vii~lh 135 (408)
T 1h4p_A 113 ESYLDQAIGWARNNSLKVWVDLH 135 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 99999999999987998999815
No 158
>>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, RAW starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii h 168} PDB: 3bcd_A* 3bcf_A (A:117-231,A:323-505)
Probab=41.52 E-value=26 Score=16.27 Aligned_cols=51 Identities=18% Similarity=0.003 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECC-CCC--CHH---HHH-HHHCCCCEEEECCCCCH
Q ss_conf 3788999998620269638997254-444--147---999-97406614651121110
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFADG-NGN--EHS---LQA-AKLTGADCIELYTGPYG 166 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFIDp-d~~--q~~---i~~-a~~~Gad~VElhTG~Ya 166 (261)
..+.++..|+.+++.||+|=+=+=| +|+ +.. +.. ..+.|+|-.-+-+-++-
T Consensus 91 ~~~~~~~lv~~~h~~gi~vi~D~V~~np~V~~~i~~~~~~Wi~~~GVDGfR~Daa~~~ 148 (298)
T 3bc9_A 91 TKGELENAIDALHNNDIKVYFDAVLENEAVQNDVIDWGQWIINNIDFDGFRLDAVKHI 148 (298)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCTCHHHHHHHHHHHHHHHHTTCCCEEEETTGGGS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 9999999999999879989999864888898999777999887607635545444430
No 159
>>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} (A:)
Probab=41.25 E-value=26 Score=16.24 Aligned_cols=135 Identities=18% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE------------CCCCCCH
Q ss_conf 4856899999850721289710165553335782213337889999986202696389972------------5444414
Q gi|254780438|r 78 YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA------------DGNGNEH 145 (261)
Q Consensus 78 ~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFI------------Dpd~~q~ 145 (261)
..+.+++.-+++.-=+.|-+ +.+-+++ ..+..+.+++..+..|+.|.-=+ -.+|++
T Consensus 85 ~~~~~~i~~a~~~Gf~sVmi---------D~S~l~~--~enit~~~v~~a~~~g~~vE~ElG~~~g~e~~~~~~t~~~~- 152 (251)
T 1qwg_A 85 GKFDEFLNECEKLGFEAVEI---------SDGSSDI--SLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIK- 152 (251)
T ss_dssp TCHHHHHHHHHHHTCCEEEE---------CCSSSCC--CHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHH-
T ss_pred CCHHHHHHHHHHCCCCEEEE---------CCCCCCC--CHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHH-
T ss_conf 96999999999859988997---------5985678--98999999999985899895145578888665559999999-
Q ss_pred HHHHHHHCCCCEE-----EECC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCE
Q ss_conf 7999974066146-----5112--11102444356433666889998766541562352078989877999997369963
Q gi|254780438|r 146 SLQAAKLTGADCI-----ELYT--GPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYIS 218 (261)
Q Consensus 146 ~i~~a~~~Gad~V-----ElhT--G~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~ 218 (261)
..+...++|+|.+ ++=| |-|... ++.....+++| ..+....|-.|-|.|-.... .+++ -++.
T Consensus 153 a~~f~~~tg~d~l~i~A~~~Gt~HG~y~~~---~~l~~~~l~~I----~~~~~~plVlHGaSg~~~~~--~~i~--~g~~ 221 (251)
T 1qwg_A 153 LINFDLDAGADYVIIEGRESGKGKGLFDKE---GKVKENELDVL----AKNVDINKVIFEAPQKSQQV--AFIL--KFGS 221 (251)
T ss_dssp HHHHHHHHTCSEEEECCTTTCCSSTTBCTT---SCBCHHHHHHH----HTTSCGGGEEEECCSHHHHH--HHHH--HHCT
T ss_pred HHHHHHHCCCCEEEEEHHHCCCCCCEECCC---CCHHHHHHHHH----HHHCCCCCEEEECCCHHHHH--HHHH--HHCC
T ss_conf 999999668858998402117761224688---77018899999----98489202799789856899--9999--9798
Q ss_pred EEEEH---HH--HHHHHHHHHH
Q ss_conf 88425---99--9999999409
Q gi|254780438|r 219 EISVG---HA--FAATALECGV 235 (261)
Q Consensus 219 EvsIG---Ha--iIseAl~~GL 235 (261)
.+|++ |. +-.+++-.|+
T Consensus 222 KvNi~t~~~~~~~~~~~~r~~l 243 (251)
T 1qwg_A 222 SVNLANIAFDEVISLETLRRGL 243 (251)
T ss_dssp TCCEEEEEGGGHHHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHHHHHCCC
T ss_conf 9652367999987888875578
No 160
>>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} (A:)
Probab=41.05 E-value=18 Score=17.45 Aligned_cols=107 Identities=15% Similarity=0.135 Sum_probs=61.0
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC--CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 98247883348889999988740001367415888348--5689999985072128971016555333578221333788
Q gi|254780438|r 42 TVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP--NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQAL 119 (261)
Q Consensus 42 TvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p--~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~ 119 (261)
|.|.|.+++-....+-. ++... . ...++-+-+.+ .++.++++.+..++-+.+ ++|+.. +..+
T Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~-~--~~~~~i~a~D~~~~~~~i~~~~~~~~~v~~~----------k~~~~~--~~~~ 66 (255)
T 3ldv_A 3 HHHHHSSGVDLGTENLY-FQSNA-M--NDPKVIVALDYDNLADALAFVDKIDPSTCRL----------KVGKEM--FTLF 66 (255)
T ss_dssp ----------------------C-C--CCCCEEEEECCSSHHHHHHHHTTSCGGGCEE----------EEEHHH--HHHH
T ss_pred CCCCCCCCCCCCCCHHH-HHHHH-H--CCCCEEEEECCCCHHHHHHHHHHHCCCCCEE----------EECHHH--HHHH
T ss_conf 54445444443531245-54865-0--8997699956899999999999847856599----------989698--7650
Q ss_pred HHHHHHHHCCCCCEEEE---EECCCCC-CHHHHHHHHCCCCEEEECCCC
Q ss_conf 99999862026963899---7254444-147999974066146511211
Q gi|254780438|r 120 LTKTVARLHNLGSRISL---FADGNGN-EHSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 120 L~~~i~~l~~~girvSL---FIDpd~~-q~~i~~a~~~Gad~VElhTG~ 164 (261)
-.+.++.|++.+..+-+ +.|-.++ ...++.+.+.|||+|=+|...
T Consensus 67 g~~~i~~l~~~~~~i~~D~k~~di~~t~~~~~~~~~~~gaD~vtvh~~~ 115 (255)
T 3ldv_A 67 GPDFVRELHKRGFSVFLDLKFHDIPNTCSKAVKAAAELGVWMVNVHASG 115 (255)
T ss_dssp HHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG
T ss_pred CHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 9999999995799599995304463899999999874077789971566
No 161
>>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* (A:1-354)
Probab=39.98 E-value=25 Score=16.40 Aligned_cols=88 Identities=10% Similarity=0.108 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCC----CCCCCCCCHH---HHHHHHHHHHHHHCCCCCEEEEEECCCCCC--------
Q ss_conf 5689999985072128971016555----3335782213---337889999986202696389972544441--------
Q gi|254780438|r 80 NETFLNLCERYKPEQITLVPDDPHQ----LTSDHGWDFL---QNQALLTKTVARLHNLGSRISLFADGNGNE-------- 144 (261)
Q Consensus 80 ~~e~i~ia~~ikP~qvtLVPe~r~e----lTTegGldv~---~~~~~L~~~i~~l~~~girvSLFIDpd~~q-------- 144 (261)
.+++++.+.+..-+.|.|.=.-.+- -|.-+-|++. ...+.|+.+++.+++.|++|-+...+-++-
T Consensus 107 ~~~~v~~~k~aG~~~vvl~~~h~~g~~~~~S~~~~~~~~~~~~~~D~l~~lv~a~~k~Glkvg~y~s~~~dw~~p~~~~~ 186 (354)
T 2zxd_A 107 PQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTTEPIR 186 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEECSCCGGGCCSCCC
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 99999999984997699767733774236899999877688989737999999998669848999636534566666667
Q ss_pred ---------------------HHHHHHHHCCCCEEEECCCCCHH
Q ss_conf ---------------------47999974066146511211102
Q gi|254780438|r 145 ---------------------HSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 145 ---------------------~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
..-+.+..-|+|.|=+--+.|..
T Consensus 187 ~~~~~~~~~~~~p~~~~~~~~~i~El~~~Y~~dgi~~D~~~~~~ 230 (354)
T 2zxd_A 187 YPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEK 230 (354)
T ss_dssp SGGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSEEEEESCCCGG
T ss_pred CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 84233125654088999999999999973488479865765566
No 162
>>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae} (A:177-261)
Probab=39.52 E-value=28 Score=16.06 Aligned_cols=67 Identities=19% Similarity=0.273 Sum_probs=42.3
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHHCCCCEEEEC
Q ss_conf 99985072128971016555333578221333788999998620269638997254444147999-974066146511
Q gi|254780438|r 85 NLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQA-AKLTGADCIELY 161 (261)
Q Consensus 85 ~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~-a~~~Gad~VElh 161 (261)
=++.++.=.++-++...++. .-....+..+++.+++.+|++ +|.+|..+.+.++. +.++|+..+.|+
T Consensus 13 Y~~~~ygl~~~~~~~~~~~~---------~ps~~~i~~~~~~ik~~~i~~-If~e~~~~~k~~~~ia~e~g~~~~~ld 80 (85)
T 3cx3_A 13 YLAKRFGLNQLGIAGISPEQ---------EPSPRQLTEIQEFVKTYKVKT-IFTESNASSKVAETLVKSTGVGLKTLN 80 (85)
T ss_dssp HHHHHTTCCEEEEECSSTTC---------CCCSHHHHHHHHHHHHTTCCC-EEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred HHHHHCCCEEEEECCCCCCC---------CCCHHHHHHHHHHHHCCCCEE-EEECCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 26886596687504667644---------522568999998752467559-998488991999999998099868857
No 163
>>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} (A:1-344)
Probab=39.41 E-value=25 Score=16.43 Aligned_cols=28 Identities=14% Similarity=0.077 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 3378899999862026963899725444
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLFADGNG 142 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLFIDpd~ 142 (261)
...+.|+..|+.+++.||+|-+-+-++-
T Consensus 72 Gt~~~fk~Lv~~~H~~Gi~VilD~V~nH 99 (344)
T 1ua7_A 72 GTEQEFKEMCAAAEEYGIKVIVDAVINH 99 (344)
T ss_dssp EEHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 9999999999998656887999851560
No 164
>>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} (A:69-151)
Probab=39.06 E-value=28 Score=16.01 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=37.5
Q ss_pred HHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHH
Q ss_conf 8620269638997254444147999974066146511211102444356
Q gi|254780438|r 125 ARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQ 173 (261)
Q Consensus 125 ~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~ 173 (261)
.-.+..|+++-+|+..+..+.-++..+..||+ |.++.|.|.+++....
T Consensus 23 ~~a~~~g~~~~iv~p~~~~~~k~~~l~~~GA~-Vi~~~~~~~~~~~~~~ 70 (83)
T 1v71_A 23 LSAKILGIPAKIIMPLDAPEAKVAATKGYGGQ-VIMYDRYKDDREKMAK 70 (83)
T ss_dssp HHHHHTTCCEEEEEETTCCHHHHHHHHHTTCE-EEEECTTTTCHHHHHH
T ss_pred HHHCCCCCCCEECCCCCCCHHHHHHHHHHCCC-EEEECCCCCHHHHHHH
T ss_conf 53202333313215653218999999982893-7996687206799999
No 165
>>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=39.01 E-value=29 Score=16.01 Aligned_cols=184 Identities=9% Similarity=0.047 Sum_probs=111.2
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC-HHHHHHHHHHHCCCCCCCEEEE-------EECC-CHHHHHHHHHHCC
Q ss_conf 68998999999997499899982478833488-8999998874000136741588-------8348-5689999985072
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIR-YTDLPEIRRLIDEQFPKAELNI-------EGYP-NETFLNLCERYKP 92 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~-~~Dv~~l~~~~~~~~~~~elNi-------Eg~p-~~e~i~ia~~ikP 92 (261)
.|.|+..++..+..+|+.-+.+..|...=+.. ..++..+++.+ ++++.. ++.- .+.+.+.+.+..=
T Consensus 9 ~~~~~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~~l~~i~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G~ 83 (219)
T 2h6r_A 9 TYNESIGNRGLEIAKIAEKVSEESGITIGVAPQFVDLRMIVENV-----NIPVYAQHIDNINPGSHTGHILAEAIKDCGC 83 (219)
T ss_dssp TCGGGSTHHHHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHC-----CSCBEESCCCSCCSBSCTTCCCHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCC-----CCEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 88672567999999999861334798899979999999999507-----9706426245156987301100899988652
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH--
Q ss_conf 128971016555333578221333788999998620269638997254444147999974066146511211102444--
Q gi|254780438|r 93 EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYN-- 170 (261)
Q Consensus 93 ~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~-- 170 (261)
+.+-+- + |+..+ ....+...+...++.|+.+-+++.++.+ .+.++..+.+.+.+.....-....
T Consensus 84 ~~v~l~-~------~~~~~----~~~~~~~~~~~a~~~gl~~iv~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (219)
T 2h6r_A 84 KGTLIN-H------SEKRM----LLADIEAVINKCKNLGLETIVCTNNINT---SKAVAALSPDCIAVEPPELIGTGIPV 149 (219)
T ss_dssp CEEEES-B------TTBCC----BHHHHHHHHHHHHHHTCEEEEEESSSHH---HHHHTTTCCSEEEECCCC--------
T ss_pred HHEEEC-C------HHHHH----HHCCHHHHHHHHHHCCCEEEEEECCHHH---HHHHHHHCCCEEEECCHHHHCCCCCC
T ss_conf 031113-5------01221----0020479999999879905885062343---31444304625776572242068788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHH
Q ss_conf 356433666889998766541562352078989877999997369963884259999
Q gi|254780438|r 171 NPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFA 227 (261)
Q Consensus 171 ~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiI 227 (261)
...........+. ..........+=+|=|.+-.|-...+. -.+.+=|=+|-+++
T Consensus 150 ~~~~~~~~~~~i~--~~~~~~~~~~ii~ggGI~~~~~~~~~~-~~gadgvlVGsai~ 203 (219)
T 2h6r_A 150 SKANPEVVEGTVR--AVKEINKDVKVLCGAGISKGEDVKAAL-DLGAEGVLLASGVV 203 (219)
T ss_dssp ------CSHHHHH--HHHHHCTTCEEEECSSCCSHHHHHHHH-TTTCCCEEESHHHH
T ss_pred CHHHHHHHHHHHH--HHHHHCCCCCEEEECCCCCCHHHHHHH-CCCCCEEEEEEEEE
T ss_conf 8667899999999--877522460235414445744899973-46997799823760
No 166
>>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichiisubsp} (A:565-727)
Probab=38.31 E-value=29 Score=15.94 Aligned_cols=101 Identities=13% Similarity=0.003 Sum_probs=60.5
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCE-EEEE-ECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 99824788334888999998874000136741-5888-348568999998507212897101655533357822133378
Q gi|254780438|r 41 LTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAE-LNIE-GYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQA 118 (261)
Q Consensus 41 ITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~e-lNiE-g~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~ 118 (261)
++.=+..|.-++--.-+..+-+ .. .-+ .++- ..|.+++++-+.+.+|+.|+|-= . ...+..
T Consensus 36 l~~~~~~d~h~lg~~~ia~~l~---~~--G~evi~lg~~~~~e~~~~~~~~~~~d~V~iS~-----------~-~~~~~~ 98 (163)
T 1req_A 36 LLAKMGQDGHDRGQKVIATAYA---DL--GFDVDVGPLFQTPEETARQAVEADVHVVGVSS-----------L-AGGHLT 98 (163)
T ss_dssp EEECBTTCCCCHHHHHHHHHHH---HH--TCEEEECCTTBCHHHHHHHHHHTTCSEEEEEE-----------C-SSCHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHH---HC--CCEEECCCCCCCHHHHHHHHHHCCCCEEEEEC-----------C-CCCHHH
T ss_conf 9981784243435999999998---58--96175488889999999999976999999917-----------8-745588
Q ss_pred HHHHHHHHHCCCCC-EEEEEECCCCCCHHHHHHHHCCCCEE
Q ss_conf 89999986202696-38997254444147999974066146
Q gi|254780438|r 119 LLTKTVARLHNLGS-RISLFADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 119 ~L~~~i~~l~~~gi-rvSLFIDpd~~q~~i~~a~~~Gad~V 158 (261)
.+...++.+++.|. .+-+++--.+--...+..++.|+|.+
T Consensus 99 ~~~~li~~lr~~g~~~~~i~vGG~~~~~~~~~~~~~G~d~~ 139 (163)
T 1req_A 99 LVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEI 139 (163)
T ss_dssp HHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEE
T ss_conf 99999999996799885799807788787999997798868
No 167
>>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Thermotoga maritima} (A:)
Probab=37.73 E-value=14 Score=18.12 Aligned_cols=80 Identities=11% Similarity=-0.018 Sum_probs=40.0
Q ss_pred HHCCCEEEEEECCCCC-C--CCCCCCCHH--HHHHHHHHHHHHHCCCCCEEEEEEC----CCCCCHHHHHHHHCCCCEEE
Q ss_conf 5072128971016555-3--335782213--3378899999862026963899725----44441479999740661465
Q gi|254780438|r 89 RYKPEQITLVPDDPHQ-L--TSDHGWDFL--QNQALLTKTVARLHNLGSRISLFAD----GNGNEHSLQAAKLTGADCIE 159 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~e-l--TTegGldv~--~~~~~L~~~i~~l~~~girvSLFID----pd~~q~~i~~a~~~Gad~VE 159 (261)
.+.|-++|+=....++ + +.+.+|+-. .....=.+.++.+++.+..+-+-.+ |+.-...++.+.+.|+|.|=
T Consensus 11 ~~~~~i~alD~~~l~~~i~~~~~~~~~~i~~~~~~~G~~~i~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~gad~it 90 (213)
T 1vqt_A 11 HHMTPVLSLDMEDPIRFIDENGSFEVVKVGHNLAIHGKKIFDELAKRNLKIILDLKFCDIPSTVERSIKSWDHPAIIGFT 90 (213)
T ss_dssp CCCEEEEECCSSSHHHHHHHHCCCSEEEECHHHHTTCTHHHHHHHTTTCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf 45435897674549999997599898998989985129999999977991895743357059999999988534663899
Q ss_pred ECCCCCHHH
Q ss_conf 112111024
Q gi|254780438|r 160 LYTGPYGAC 168 (261)
Q Consensus 160 lhTG~Ya~a 168 (261)
+|-...-+.
T Consensus 91 vh~~~~~~~ 99 (213)
T 1vqt_A 91 VHSCAGYES 99 (213)
T ss_dssp EEGGGCHHH
T ss_pred EECCCCCCH
T ss_conf 845786105
No 168
>>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel; HET: U5P; 2.40A {Bacillus subtilis} (A:)
Probab=37.45 E-value=30 Score=15.85 Aligned_cols=154 Identities=12% Similarity=0.081 Sum_probs=79.3
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC----CCCCHHHHHHHHCCC
Q ss_conf 5689999985072128971016555333578221333788999998620269638997254----444147999974066
Q gi|254780438|r 80 NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG----NGNEHSLQAAKLTGA 155 (261)
Q Consensus 80 ~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp----d~~q~~i~~a~~~Ga 155 (261)
-++.++++.+..|+.+.+ ++|+... ..+=.+.+..|++.+..+.+.++- ...+..++.+.+.|+
T Consensus 15 l~~~l~~i~~~~~~vd~~----------~~g~~~~--~~~G~~~i~~L~~~~~~~~~d~k~~di~~~~~~~~~~~~~~ga 82 (239)
T 1dbt_A 15 AEETLAFLAPFQQEPLFV----------KVGMELF--YQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGV 82 (239)
T ss_dssp HHHHHHHTGGGTTSCCEE----------EECHHHH--HHHTHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHCCCCCCEE----------EECHHHH--HHCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf 999999999708755199----------9899998--5249799999875042200001433587067778776531365
Q ss_pred CEEEECC--CCCHHH-HHHHHH---------------------------H-----HHHHHHHHHHHHHHHHCC-------
Q ss_conf 1465112--111024-443564---------------------------3-----366688999876654156-------
Q gi|254780438|r 156 DCIELYT--GPYGAC-YNNPQQ---------------------------E-----RIFLNKLAITAQLAQKMD------- 193 (261)
Q Consensus 156 d~VElhT--G~Ya~a-~~~~~~---------------------------~-----~~el~~i~~aa~~A~~lg------- 193 (261)
|+|-+|- |+.... +..-.+ . ....+.+...+..+...|
T Consensus 83 d~itvh~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~g~~~~~~~ 162 (239)
T 1dbt_A 83 DLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCS 162 (239)
T ss_dssp SEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCEEECC
T ss_conf 46776245654889999987653010024565068875025644578987532125543033087765664396333212
Q ss_pred ------------------------CEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf ------------------------23520789898779999973699638842599999999940999999999999741
Q gi|254780438|r 194 ------------------------LQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 194 ------------------------L~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~ 249 (261)
.++.+.=|.+++|+..+++ -+-+=+.+|-+|+.. --..+++++|++.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~--~Gad~ivvGr~I~~a---~dp~~~~~~~~~~i~~~ 237 (239)
T 1dbt_A 163 VHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIARE--KGSSAIVVGRSITKA---EDPVKAYKAVRLEWEGI 237 (239)
T ss_dssp GGGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHHHH--TTCSEEEECHHHHTS---SCHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEECCHHHHHH--CCCCEEEECCCCCCC---CCHHHHHHHHHHHHHHH
T ss_conf 0344432001334112565423236777799654479999998--799999989845589---99999999999999985
Q ss_pred H
Q ss_conf 0
Q gi|254780438|r 250 L 250 (261)
Q Consensus 250 ~ 250 (261)
+
T Consensus 238 ~ 238 (239)
T 1dbt_A 238 K 238 (239)
T ss_dssp -
T ss_pred H
T ss_conf 5
No 169
>>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} (A:)
Probab=37.07 E-value=31 Score=15.81 Aligned_cols=186 Identities=12% Similarity=0.055 Sum_probs=105.0
Q ss_pred HHHHHHHHHHCCCCEEEEECC-CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-CCCHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 899999999749989998247-8833488899999887400013674158883-48568999998507212897101655
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPR-PDQRHIRYTDLPEIRRLIDEQFPKAELNIEG-YPNETFLNLCERYKPEQITLVPDDPH 103 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R-~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg-~p~~e~i~ia~~ikP~qvtLVPe~r~ 103 (261)
.++-+..+.++|+|-+-+-.. ...|++...++..+...+... .....+=. .+.+....++....++.+++-.+.+.
T Consensus 10 ~~e~~~~~~~~g~d~i~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~i~~~~~~~g~~~v~~h~~~~~ 87 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPF--VVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEEPP 87 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSS--SEEEEEESSCCHHHHHHHHHHTTCSEEEECSCCCH
T ss_pred CHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC--CEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 4999999981799989897279999851799988999850787--42554312225766552002233444434456898
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 5333578221333788999998620269-638997254444147999974066146511211102444356433666889
Q gi|254780438|r 104 QLTSDHGWDFLQNQALLTKTVARLHNLG-SRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKL 182 (261)
Q Consensus 104 elTTegGldv~~~~~~L~~~i~~l~~~g-irvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i 182 (261)
+ .+..++... +-.....++. + ...+...++|.|-+++..-... .+.....
T Consensus 88 ~------------------~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~d~i~~~~~~~~~~--~~~~~~~----- 138 (203)
T 1v5x_A 88 E------------------WAEAVGRFYPVIKAFPLEGP--A--RPEWADYPAQALLLDGKRPGSG--EAYPRAW----- 138 (203)
T ss_dssp H------------------HHHHHTTTSCEEEEEECSSS--C--CGGGGGSSCSEEEEECSSTTSC--CCCCGGG-----
T ss_pred H------------------HHHHHHHCCCCCEEECCCCH--H--HHHHHHCCHHHEEECCCCCCCC--CCCCHHH-----
T ss_conf 9------------------99998620243245425753--3--6887512056424314345666--6576777-----
Q ss_pred HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Q ss_conf 99876654156235207898987799999736996388425999999999409--999999999997410
Q gi|254780438|r 183 AITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGV--KEAVFCFRRACGQHL 250 (261)
Q Consensus 183 ~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL--~~aI~~~~~ii~~~~ 250 (261)
........+.+-|.=|+|.+|++.+++. ..+-+-+|=+|... -|. ..-++++.+.+++.+
T Consensus 139 ---~~~~~~~~~pi~~~GGI~~~ni~~~~~~--g~~gi~v~S~i~~~---~~~kd~~~~~~~i~~~k~~~ 200 (203)
T 1v5x_A 139 ---AKPLLATGRRVILAGGIAPENLEEVLAL--RPYALDLASGVEEA---PGVKSAEKLRALFARLASLR 200 (203)
T ss_dssp ---GHHHHHTTSCEEECSSCCSTTHHHHHHH--CCSEEEESGGGEEE---TTEECHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHCCCCEEEECCCCHHHHHHHHHC--CCCEEEECCCEECC---CCCCCHHHHHHHHHHHHHHH
T ss_conf ---6534541574477568898999999966--99989977850668---99659999999999998755
No 170
>>3iar_A Adenosine deaminase; purine metabolism, structural genomics, structural genomics consortium, SGC, acetylation, disease mutation; HET: 3D1; 1.52A {Homo sapiens} PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 1a4m_A* 1a4l_A* ... (A:61-239)
Probab=36.72 E-value=31 Score=15.77 Aligned_cols=114 Identities=12% Similarity=0.095 Sum_probs=57.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHH--HHHHHHH-HHHHHHHHH
Q ss_conf 5782213337889999986202-69638997254444147999974066146511211102--4443564-336668899
Q gi|254780438|r 108 DHGWDFLQNQALLTKTVARLHN-LGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGA--CYNNPQQ-ERIFLNKLA 183 (261)
Q Consensus 108 egGldv~~~~~~L~~~i~~l~~-~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~--a~~~~~~-~~~el~~i~ 183 (261)
+.|++...-.+.+...++.... .+|.+.+.+..+... ..+.+..+ .+.+..+-..++- ....... ....+.++.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~rlI~~~~R~~-~~e~~~~~-~~~~~~~~~~vvG~dl~G~E~~~~~~~~~~~~ 135 (179)
T 3iar_A 58 EGDLTPDEVVALVGQGLQEGERDFGVKARSILCCMRHQ-PNWSPKVV-ELCKKYQQQTVVAIDLAGDETIPGSSLLPGHV 135 (179)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTC-GGGHHHHH-HHHHHTTTTTEEEEEEESCTTSTTGGGCHHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCC-CHHHHHHH-HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
T ss_conf 35888999999999999997750755898999832789-29999999-99986445846775036877788625679999
Q ss_pred HHHHHHHH--CCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 98766541--56235207898987799999736996388425999
Q gi|254780438|r 184 ITAQLAQK--MDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 184 ~aa~~A~~--lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
.+.++|++ +++.+|||=-.+-+|+...+. .+.-==|||.+
T Consensus 136 ~~~~~a~~~gl~~t~HAGE~~~~~~i~~Ai~---~l~~~RIGHGv 177 (179)
T 3iar_A 136 QAYQEAVKSGIHRTVHAGEVGSAEVVKEAVD---ILKTERLGHGY 177 (179)
T ss_dssp HHHHHHHHHTCEEEEEESSSSCHHHHHHHHH---TSCCSEEEECG
T ss_pred HHHHHHHHCCCCEEEECCCCCCCHHHHHHHH---HHCCCCCHHHH
T ss_conf 9999999849904432567798114999998---71885332677
No 171
>>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichiisubsp} (B:475-637)
Probab=36.52 E-value=31 Score=15.75 Aligned_cols=108 Identities=8% Similarity=-0.043 Sum_probs=66.1
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHCCCCCCCE-EEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9824788334888999998874000136741-588834856899999850721289710165553335782213337889
Q gi|254780438|r 42 TVHPRPDQRHIRYTDLPEIRRLIDEQFPKAE-LNIEGYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALL 120 (261)
Q Consensus 42 TvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~e-lNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L 120 (261)
..-+-+|.-|---.++ +..++... ..+ .++-....+++++.+.+.+|+-++|- .....+....
T Consensus 40 l~~~~~~~~H~~g~~~--~~~~l~~~--G~~v~~lg~~~p~~~~~a~~~~~~d~i~ls------------~~~~~~~~~~ 103 (163)
T 1req_B 40 LACLGTRRDFGGREGF--SSPVWHIA--GIDTPQVEGGTTAEIVEAFKKSGAQVADLC------------SSAKVYAQQG 103 (163)
T ss_dssp EEECSCHHHHHHHHHH--HHHHHHHT--TCBCCEEECCCHHHHHHHHHHHTCSEEEEE------------CCHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHH--HHHHHHHC--CCCCCCCCCCCHHHHHHHHHHCCCCEEEEE------------CCCCHHHHHH
T ss_conf 8705863321047888--88799844--842035888998999999986599889995------------7861068889
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 9999862026963899725444414799997406614651121110
Q gi|254780438|r 121 TKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 121 ~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
..+++.+++.+.++-+.+-.-......+..++.|+|.+ ++.|.-|
T Consensus 104 ~~~i~~lr~~~~~~~vi~GG~~~~~~~~~~~~~G~D~~-~~~~~~~ 148 (163)
T 1req_B 104 LEVAKALKAAGAKALYLSGAFKEFGDDAAEAEKLIDGR-LFMGMDV 148 (163)
T ss_dssp HHHHHHHHHTTCSEEEEESCGGGGGGGHHHHHHHCCCE-ECTTCCH
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCEE-ECCCCCH
T ss_conf 99999999669985999727887423568997087605-0189749
No 172
>>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} (B:95-262)
Probab=36.47 E-value=31 Score=15.74 Aligned_cols=70 Identities=19% Similarity=0.221 Sum_probs=48.8
Q ss_pred CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE--EEEEECCCCCCHHHHHHHHCCC
Q ss_conf 48568999998507212897101655533357822133378899999862026963--8997254444147999974066
Q gi|254780438|r 78 YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSR--ISLFADGNGNEHSLQAAKLTGA 155 (261)
Q Consensus 78 ~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~gir--vSLFIDpd~~q~~i~~a~~~Ga 155 (261)
-|.+++++.+.+.+|+.++|=- ++++.+ .+...++.+++.+++.|.+ +-+.+---. ..-+.++++|+
T Consensus 73 ~p~e~lv~~~~~~~~div~lS~-----~~~~~~----~~~~~~~~~i~~lr~~g~~~~v~ii~GG~~--~~~~~~~~~Ga 141 (168)
T 1xrs_B 73 VANEDFIKKAVELEADVLLVSQ-----TVTQKN----VHIQNMTHLIELLEAEGLRDRFVLLCGGPR--INNEIAKELGY 141 (168)
T ss_dssp BCHHHHHHHHHHTTCSEEEEEC-----CCCTTS----HHHHHHHHHHHHHHHTTCGGGSEEEEECTT--CCHHHHHTTTC
T ss_pred CCHHHHHHHHHHCCCCEEEEEE-----EECCCH----HHHHHHHHHHHHHHHCCCCCCCEEEEECCC--CCHHHHHHCCC
T ss_conf 9999999999861999999986-----303630----268999999999996699889789998998--99999997799
Q ss_pred CEE
Q ss_conf 146
Q gi|254780438|r 156 DCI 158 (261)
Q Consensus 156 d~V 158 (261)
|.+
T Consensus 142 d~~ 144 (168)
T 1xrs_B 142 DAG 144 (168)
T ss_dssp SEE
T ss_pred CEE
T ss_conf 888
No 173
>>2dch_X Putative homing endonuclease; alpha/beta fold, hydrolase; 2.06A {Thermoproteus} (X:34-105)
Probab=36.20 E-value=24 Score=16.57 Aligned_cols=27 Identities=33% Similarity=0.458 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHCCCCCEE-EEEECC
Q ss_conf 333788999998620269638-997254
Q gi|254780438|r 114 LQNQALLTKTVARLHNLGSRI-SLFADG 140 (261)
Q Consensus 114 ~~~~~~L~~~i~~l~~~girv-SLFIDp 140 (261)
.+...++.+++..++++||.+ |+|-|-
T Consensus 14 QK~r~FidkIv~llK~~gi~I~S~FYDk 41 (72)
T 2dch_X 14 QKDRRFIDKIVALLKSAEIKISSLFYDK 41 (72)
T ss_dssp ESCHHHHHHHHHHHHHHTCCEEEEEEET
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 5889999999999998278762025516
No 174
>>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A (A:)
Probab=35.97 E-value=32 Score=15.69 Aligned_cols=187 Identities=10% Similarity=0.013 Sum_probs=106.3
Q ss_pred CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH------
Q ss_conf 21443223220788689989999999974998999824788334888999998874000136741588834856------
Q gi|254780438|r 8 NLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE------ 81 (261)
Q Consensus 8 NidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~------ 81 (261)
=+|| ++........=++......+...|+++|.++|. =+...++.+... ...-+...+.++.
T Consensus 31 aiDh--~~~l~~~~~~~~i~~~~~~a~~~~~~ai~v~~~---------~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~ 98 (273)
T 2qjg_A 31 PMDH--GVSNGPIKGLIDIRKTVNDVAEGGANAVLLHKG---------IVRHGHRGYGKD-VGLIIHLSGGTAISPNPLK 98 (273)
T ss_dssp ECCH--HHHHCSCTTSSSHHHHHHHHHHHTCSEEEECHH---------HHHSCCCSSSCC-CEEEEECEECCTTSSSTTC
T ss_pred ECCC--CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCC---------HHHHHCCCCCCC-CEEEEEECCCCCCCCCCCH
T ss_conf 7657--723488744259999999998548988995573---------686505334787-5079996588403688501
Q ss_pred ----HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---CC--------CCHH
Q ss_conf ----89999985072128971016555333578221333788999998620269638997254---44--------4147
Q gi|254780438|r 82 ----TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG---NG--------NEHS 146 (261)
Q Consensus 82 ----e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp---d~--------~q~~ 146 (261)
.-++-+.+.-.+.|..|.--.. -+-....+.++.+++..++.|+.+=+=+-+ .. -...
T Consensus 99 ~~~~~~v~~a~~~GAdav~~~~~~~~-------~~~~~~~~~i~~v~~~~~~~g~~~ile~~~~~~~~~~~~~~e~i~~a 171 (273)
T 2qjg_A 99 KVIVTTVEEAIRMGADAVSIHVNVGS-------DEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHA 171 (273)
T ss_dssp CEECSCHHHHHHTTCSEEEEEEEETS-------TTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHH
T ss_pred HHHHCCHHHHHCCCCCEEEEEEECCC-------CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 43320488885158646999974389-------83599999999999999864984488874257776778888999999
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE----EECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 99997406614651121110244435643366688999876654156235----20789898779999973699638842
Q gi|254780438|r 147 LQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQI----NAGHDLTIQNIPNLINAIPYISEISV 222 (261)
Q Consensus 147 i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~V----nAGHgLn~~Nl~~~i~~Ip~I~EvsI 222 (261)
...+.++|+|.|-..||.....+..-. ..+...-... -+|=.-.++.+...+. .+-+-+-+
T Consensus 172 ~~~a~e~GaD~iKt~~~~~~~~~~~~~-------------~~~~~~~~~~~G~k~~g~~~~~~~~~~a~~--aGa~gi~~ 236 (273)
T 2qjg_A 172 ARLGAELGADIVKTSYTGDIDSFRDVV-------------KGCPAPVVVAGGPKTNTDEEFLQMIKDAME--AGAAGVAV 236 (273)
T ss_dssp HHHHHHTTCSEEEECCCSSHHHHHHHH-------------HHCSSCEEEECCSCCSSHHHHHHHHHHHHH--HTCSEEEC
T ss_pred HHHHHHHCCCEEECCCCCCHHHHHHHH-------------HHCCCCEEEECCCCCCCHHHHHHHHHHHHH--CCCEEEEE
T ss_conf 999999699988547899979999999-------------848986389718998999999999999998--79979971
Q ss_pred HHHHHH
Q ss_conf 599999
Q gi|254780438|r 223 GHAFAA 228 (261)
Q Consensus 223 GHaiIs 228 (261)
|.++..
T Consensus 237 GR~i~~ 242 (273)
T 2qjg_A 237 GRNIFQ 242 (273)
T ss_dssp CHHHHT
T ss_pred CHHHHC
T ss_conf 405457
No 175
>>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} (A:1-386)
Probab=35.76 E-value=27 Score=16.20 Aligned_cols=55 Identities=16% Similarity=0.048 Sum_probs=33.1
Q ss_pred HHHHHCCCEEEEEECCCCCC-----CCCCCCCHH---------HHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 99850721289710165553-----335782213---------33788999998620269638997254
Q gi|254780438|r 86 LCERYKPEQITLVPDDPHQL-----TSDHGWDFL---------QNQALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 86 ia~~ikP~qvtLVPe~r~el-----TTegGldv~---------~~~~~L~~~i~~l~~~girvSLFIDp 140 (261)
-..+.-=+.|-|-|--+... ...+|-+.. +..+.++..|+.+|+.||+|=+=+-+
T Consensus 31 yl~~LGv~~I~L~Pi~~~~~~~~~~~~~~gY~~~d~~~id~~~G~~~~~k~lv~~~H~~Gi~vi~D~V~ 99 (386)
T 1hx0_A 31 YLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNVGVRIYVDAVI 99 (386)
T ss_dssp TTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 999809988996928237777999997651126765746899999999999999999889989999784
No 176
>>2r6o_A Putative diguanylate cyclase/phosphodiesterase (ggdef & EAL domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans atcc 25259} PDB: 3ii8_A* (A:)
Probab=35.50 E-value=32 Score=15.64 Aligned_cols=120 Identities=14% Similarity=0.071 Sum_probs=77.2
Q ss_pred CHHHHH----HHHHH--CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHH
Q ss_conf 568999----99850--72128971016555333578221333788999998620269638997-254444147999974
Q gi|254780438|r 80 NETFLN----LCERY--KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKL 152 (261)
Q Consensus 80 ~~e~i~----ia~~i--kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~ 152 (261)
.++|.. +..+. .|.+++|--... .+..+...+...+..+++.|++++|= +..+.. .+.....
T Consensus 128 ~~~f~~~l~~~l~~~~~~~~~l~lei~~~---------~~~~~~~~~~~~i~~l~~~G~~i~ld~~g~~~~--~~~~L~~ 196 (294)
T 2r6o_A 128 GEHLTRAVDRALARSGLRPDCLELEITEN---------VXLVXTDEVRTCLDALRARGVRLALDDFGTGYS--SLSYLSQ 196 (294)
T ss_dssp GGHHHHHHHHHHHHHCCCGGGEEEEEEGG---------GGGGCCHHHHHHHHHHHHHTCEEEEEEETSSCB--CHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCC---------CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC--CHHHHCC
T ss_conf 55499999999986045741012343322---------110039999999999987598799835887645--2777504
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 066146511211102444356433666889998766541562352078989877999997369
Q gi|254780438|r 153 TGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIP 215 (261)
Q Consensus 153 ~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip 215 (261)
+..|.|-|.-.-.-....+.. ...-+.....+++++|+.|=|..==+.+-+.. +.+++
T Consensus 197 l~~d~vkid~~~~~~~~~~~~----~~~~l~~l~~~~~~~~~~viaegVE~~~~~~~-l~~~g 254 (294)
T 2r6o_A 197 LPFHGLKIDQSFVRKIPAHPS----ETQIVTTILALARGLGXEVVAEGIETAQQYAF-LRDRG 254 (294)
T ss_dssp SCCCEEEECHHHHTTTTTSHH----HHHHHHHHHHHHHHTTCEEEECCCCSHHHHHH-HHHTT
T ss_pred CCCCCCCCCHHHHHCCCCCHH----HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH-HHHCC
T ss_conf 776401244444301135716----68999999999987699899984475999999-99869
No 177
>>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} (A:1-196)
Probab=35.47 E-value=32 Score=15.64 Aligned_cols=179 Identities=15% Similarity=0.085 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH--HHHHHHHCCCCCCCEEEEEECCC--HHHHHHHHH---HCCCEE
Q ss_conf 89989999999974998999824788334888999--99887400013674158883485--689999985---072128
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDL--PEIRRLIDEQFPKAELNIEGYPN--ETFLNLCER---YKPEQI 95 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv--~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia~~---ikP~qv 95 (261)
.-|+-+.-......+.+|+|--|-==.+-.++.+- ..+.... ..+.++-+|-.+. ++|++-+.+ .-|+-+
T Consensus 7 tad~~~i~~~~~~~~~~GvTTNP~l~~~~~~~~~~~~~~i~~~~---~~~g~vsvev~~~d~~~~i~~A~~l~~~~~ni~ 83 (196)
T 1l6w_A 7 TSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAM---GGQGRLFAQVMATTAEGMVNDALKLRSIIADIV 83 (196)
T ss_dssp CCCHHHHHHHHTTSCCCEEECCHHHHHHHCSCHHHHHHHHHHHT---TTCSEEEEECCCSSHHHHHHHHHHHHHHSTTCE
T ss_pred CCCHHHHHHHHHCCCCCEEECCHHHHHHCCCCHHHHHHHHHHHC---CCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCE
T ss_conf 68999999987139968780488999866999999999999980---989968999973767778999999997286758
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 97101655533357822133378899999862026963899725444414799997406614651121110244435643
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQE 175 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~ 175 (261)
==+|=. +-|+ +.++.|.+.||+|.+=.==...| ..+|.+.|++.|=.|-|...+...++-..
T Consensus 84 IKIP~T------~~Gi----------~Ai~~L~~~GI~vn~T~vfs~~Q--a~~aa~Aga~~ispyvgRi~~~~~~g~~~ 145 (196)
T 1l6w_A 84 VKVPVT------AEGL----------AAIKMLKAEGIPTLGTAVYGAAQ--GLLSALAGAEYVAPYVNRIDAQGGSGIQT 145 (196)
T ss_dssp EEEECS------HHHH----------HHHHHHHHHTCCEEEEEECSHHH--HHHHHHHTCSEEEEBHHHHHHTTSCHHHH
T ss_pred EEEECC------HHHH----------HHHHHHHHCCCCEEEECCCCHHH--HHHHHHCCCCEEEEEEEEHHHCCCCCHHH
T ss_conf 995062------7578----------99999887393288400187999--99999725570755542245246886899
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHH
Q ss_conf 36668899987665415623520789898779999973699638842599999
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAA 228 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIs 228 (261)
- .++.... ..+...-+|-|.=-=|.+.+... ..-+++-+-|.-.+..
T Consensus 146 ~---~~~~~~~-~~~~~~tkil~AS~r~~~~~~~~--~~~G~d~~Tip~~~~~ 192 (196)
T 1l6w_A 146 V---TDLHQLL-KMHAPQAKVLAASFKTPRQALDC--LLAGCESITLPLDVAQ 192 (196)
T ss_dssp H---HHHHHHH-HHHCTTCEEEEBCCSSHHHHHHH--HHTTCSEEEECHHHHH
T ss_pred H---HHHHHHH-HHCCCCEEEEEEECCCHHHHHHH--HHCCCCEEECCHHHHH
T ss_conf 9---9999999-83589809998870879999999--9869999984999999
No 178
>>1v7c_A Threonine synthase; PLP-dependent enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; HET: HEY; 2.00A {Thermus thermophilus} (A:58-166)
Probab=34.89 E-value=13 Score=18.38 Aligned_cols=47 Identities=11% Similarity=0.088 Sum_probs=31.3
Q ss_pred HHHHHCCCCCEEEEEECCCC-CCHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf 99862026963899725444-4147999974066146511211102444
Q gi|254780438|r 123 TVARLHNLGSRISLFADGNG-NEHSLQAAKLTGADCIELYTGPYGACYN 170 (261)
Q Consensus 123 ~i~~l~~~girvSLFIDpd~-~q~~i~~a~~~Gad~VElhTG~Ya~a~~ 170 (261)
+---.+..|+++-+|+.|+. ++.-++.....|++.+ .+.|.|.++..
T Consensus 35 ~A~~a~~~g~~~~i~~p~~~~~~~k~~~~~~~Ga~v~-~~~~~~~~~~~ 82 (109)
T 1v7c_A 35 AAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIV-QVEGNFDDALR 82 (109)
T ss_dssp HHHHHHHHTCEEEEEEETTCSCHHHHHHHHHTTCEEE-EEESCHHHHHH
T ss_pred HHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCCCEE-ECCCCCCCHHH
T ss_conf 9974057668751113663135554333312796057-41675420134
No 179
>>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I (A:1-43,A:166-287)
Probab=34.80 E-value=33 Score=15.57 Aligned_cols=46 Identities=11% Similarity=0.139 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
Q ss_conf 37889999986202696389972544441479999740661465112
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT 162 (261)
-.+..++.|+.|++.|+++.+.---+ ....-..|+++|.+.|---.
T Consensus 42 ~~~da~e~I~~Lr~~Gi~v~ilTGD~-~~ta~~iA~~lGI~~v~a~~ 87 (165)
T 3a1c_A 42 TLESAKPAVQELKRMGIKVGMITGDN-WRSAEAISRELNLDLVIAEV 87 (165)
T ss_dssp CCTTHHHHHHHHHHTTCEEEEECSSC-HHHHHHHHHHHTCSEEECSC
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHCCCCEEEEEC
T ss_conf 13159999999987699789975897-79999999864974586422
No 180
>>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis} (A:)
Probab=34.48 E-value=33 Score=15.53 Aligned_cols=41 Identities=10% Similarity=0.014 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 899899999999749989998247883348889999988740
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLI 64 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~ 64 (261)
..++-+....+.++|.+||-+.+.+... ..+.....+++.+
T Consensus 28 ~~~~~e~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~l 68 (303)
T 3l23_A 28 KGDVAANLRKVKDXGYSKLELAGYGKGA-IGGVPXXDFKKXA 68 (303)
T ss_dssp SSCHHHHHHHHHHTTCCEEEECCEETTE-ETTEEHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCEEEECCCCCCC-CCCCCHHHHHHHH
T ss_conf 4899999999998599989986777756-6899999999999
No 181
>>3k2y_A Uncharacterized protein LP_0118; nucleic acid binding,zinc ION binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Lactobacillus plantarum} (A:)
Probab=34.37 E-value=34 Score=15.52 Aligned_cols=69 Identities=9% Similarity=0.055 Sum_probs=51.0
Q ss_pred CEEEEEECCC-HHHHHHHHHHC-CCEEEEEECCCC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 4158883485-68999998507-212897101655-------533357822133378899999862026963899725
Q gi|254780438|r 71 AELNIEGYPN-ETFLNLCERYK-PEQITLVPDDPH-------QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD 139 (261)
Q Consensus 71 ~elNiEg~p~-~e~i~ia~~ik-P~qvtLVPe~r~-------elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID 139 (261)
..+.+-|--. ++...+....+ .+.++||||..+ .+.++.|-.+.--.......+..+-++|-.++.-|.
T Consensus 9 ~~~~i~G~~y~~~~~~~~~~l~~g~~l~L~rEp~N~yD~nAI~V~~~~~~~iGYvPr~~a~~ia~lld~g~~~~a~v~ 86 (109)
T 3k2y_A 9 DTVTVVGERYVDDIVATLTTLRVGMAVLLQRESGNQYDDNAISVWTLQHAKLGYIARYQNQPYATLMDQGQRLYGIVT 86 (109)
T ss_dssp EEEEEECGGGCTTHHHHTTSCCTTCEEEEEECTTCSSCTTCEEEECTTCCEEEEECGGGHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEEEEEEECCHHHHHHCCCCCCEEEEEECCCCCCCHHHEEEEECCCCEEEEECHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 999998998656866787308999999999889998896893999379989998217997989998649983899999
No 182
>>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} (A:1-394)
Probab=34.27 E-value=34 Score=15.51 Aligned_cols=59 Identities=12% Similarity=0.086 Sum_probs=38.7
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEC----------------CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC
Q ss_conf 88689989999999974998999824----------------78833488899999887400013674158883485
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHP----------------RPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN 80 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~----------------R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~ 80 (261)
++++-.+.+-..-..+.|+..|=+-| +.|.|.=+.+|++.+.+.+.+. ++.+-+.+-++
T Consensus 46 ~G~~~gi~~~l~yl~~lGv~~i~l~Pi~~~~~~~gy~~~~~~~v~~~~Gt~~~lk~lv~~~H~~--gi~VilDvV~n 120 (394)
T 2z1k_A 46 GGTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAH--GVRVILDGVFN 120 (394)
T ss_dssp CCCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CEEEEEECCCC
T ss_conf 8489999985699987799789969898799999988577787684438859999999999755--70999860334
No 183
>>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} (A:1-34,A:268-397)
Probab=33.67 E-value=34 Score=15.45 Aligned_cols=96 Identities=15% Similarity=0.049 Sum_probs=45.5
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999887400013674158883485689999985072128971016555333578221333788999998620269638
Q gi|254780438|r 55 TDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRI 134 (261)
Q Consensus 55 ~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girv 134 (261)
.+|...+++....+|-.-+++=+.-.+.=+.+=..+.|.||++||-...+... ........+..+...+++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~gD~~gl~lP~~iAP~qV~Vipi~~~~~~~--------~~~~~a~~i~~~l~~~~~v 83 (164)
T 1nj8_A 12 SDILEKAEIYDVRYPIKGCGVYLHGDEKGLILPPIVAPIQVVIVPLIFKGKED--------IVMEKAKEIYEKLKGKFRV 83 (164)
T ss_dssp HHHHHHTSSCBCCSTTSSCCBBCHCBTTBCCCCTTSCSSSEEEEECCCSSCHH--------HHHHHHHHHHHHHHTTSCE
T ss_pred HHHHHHCCCCCCCCCCCCEEEECHHHHCCCEECCCCCCCCEEEEEECCCCCCH--------HHHHHHHHHHHHHHCCCCE
T ss_conf 99999759811689999628987666407420234577640699732577407--------8999999999997476862
Q ss_pred EEEECCCCCCHHHHHHHHCCCCEE
Q ss_conf 997254444147999974066146
Q gi|254780438|r 135 SLFADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 135 SLFIDpd~~q~~i~~a~~~Gad~V 158 (261)
-+--....-.+.+..|-..|+..+
T Consensus 84 ~~D~~~~slgkk~k~A~~~G~p~~ 107 (164)
T 1nj8_A 84 HIDDRDIRPGRKFNDWEIKGVPLR 107 (164)
T ss_dssp EECCSCSCHHHHHHHHHHTTCSEE
T ss_pred EEECCCCHHHHHHHHHHHCCCCEE
T ss_conf 454588607689999986098999
No 184
>>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} (A:1-219)
Probab=33.49 E-value=35 Score=15.43 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=67.7
Q ss_pred CEEEEEECCCH----HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH--HHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 41588834856----8999998507212897101655533357822133--37889999986202696389972544441
Q gi|254780438|r 71 AELNIEGYPNE----TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQ--NQALLTKTVARLHNLGSRISLFADGNGNE 144 (261)
Q Consensus 71 ~elNiEg~p~~----e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~--~~~~L~~~i~~l~~~girvSLFIDpd~~q 144 (261)
++||=.+..+. +.++...+..=+-+++- -.|+| +|.+.. ..+.+.-+++..+...--+.--..++.++
T Consensus 22 Tpf~~dg~iD~~~~~~~i~~l~~~Gv~gl~~~-----G~tgE-~~~Ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~st~~ 95 (219)
T 1xky_A 22 TPFDINGNIDFAKTTKLVNYLIDNGTTAIVVG-----GTTGE-SPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHA 95 (219)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEES-----STTTT-GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC-----EECCC-HHHCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH
T ss_conf 77689959499999999999997799989978-----65320-6659699999987768875035576675356422899
Q ss_pred --HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE-----EECCCCCHHHHHHHHHHCCCC
Q ss_conf --4799997406614651121110244435643366688999876654156235-----207898987799999736996
Q gi|254780438|r 145 --HSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQI-----NAGHDLTIQNIPNLINAIPYI 217 (261)
Q Consensus 145 --~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~V-----nAGHgLn~~Nl~~~i~~Ip~I 217 (261)
...+.|++.|+|.|-+..-.|-.. ..+. +..+.+...-|..+.+.+ -.|.+++.+.+..+ .++|.|
T Consensus 96 ~i~~a~~a~~~Gad~i~v~pp~~~~~--~~~~----i~~~~~~i~~a~~~pi~iyn~P~~~g~~~s~~~l~~L-~~~~~i 168 (219)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVAPYYNKP--SQEG----MYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRL-SEIENI 168 (219)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCC--CHHH----HHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHH-HTSTTE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCC--CHHH----HHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHH-CCCCCE
T ss_conf 99999999974999999779978898--9999----9999999963589978999678765776598886532-248998
Q ss_pred EEEEE
Q ss_conf 38842
Q gi|254780438|r 218 SEISV 222 (261)
Q Consensus 218 ~EvsI 222 (261)
-=+-.
T Consensus 169 vgvK~ 173 (219)
T 1xky_A 169 VAIKD 173 (219)
T ss_dssp EEEEE
T ss_pred EEEEC
T ss_conf 99841
No 185
>>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A (A:1-276)
Probab=33.29 E-value=35 Score=15.40 Aligned_cols=19 Identities=5% Similarity=0.006 Sum_probs=8.9
Q ss_pred HHHHHHCCCCEEEECCCCC
Q ss_conf 9999740661465112111
Q gi|254780438|r 147 LQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 147 i~~a~~~Gad~VElhTG~Y 165 (261)
++.+.+.++|.+-+-.+.-
T Consensus 117 v~~~~~~~v~~~KI~S~~~ 135 (276)
T 2wqp_A 117 ALRLQRXDIPAYKIGSGEC 135 (276)
T ss_dssp HHHHHHHTCSCEEECGGGT
T ss_pred HHHHCCCCCCHHCCCCCCC
T ss_conf 2220133656400033001
No 186
>>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5; 1.50A {Thermomonospora fusca} (A:)
Probab=33.20 E-value=35 Score=15.39 Aligned_cols=105 Identities=11% Similarity=0.058 Sum_probs=55.5
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHHCCCCCCCEEEEEECCC----------------HHHHHHH
Q ss_conf 89999999974998999824788334888--99999887400013674158883485----------------6899999
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRY--TDLPEIRRLIDEQFPKAELNIEGYPN----------------ETFLNLC 87 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~--~Dv~~l~~~~~~~~~~~elNiEg~p~----------------~e~i~ia 87 (261)
..+....+..+|+.-|-++...+.+.-+. .++..+-..+.+. .+.+-++.-.. ..+..++
T Consensus 34 ~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~ld~~~~~a~~~--Gl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (302)
T 1bqc_A 34 HTQAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCKQN--RLICMLEVHDTTGYGEQSGASTLDQAVDYWIELK 111 (302)
T ss_dssp CTTHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHHT--TCEEEEEEGGGTTTTTSTTCCCHHHHHHHHHHTH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 59999999976998799912156557766379999999999978--9989998046643445441156999999999999
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 850721289710165553335782213337889999986202696
Q gi|254780438|r 88 ERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGS 132 (261)
Q Consensus 88 ~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~gi 132 (261)
...+.+-.-+.=+--+|.....+++.......+......+++..-
T Consensus 112 ~~~~~hpsv~~~~~~NE~~~~~~~~~~~~~~~~~~~~~~~r~~d~ 156 (302)
T 1bqc_A 112 SVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGF 156 (302)
T ss_dssp HHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTC
T ss_pred HHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 985289976999601012789984077899999999999997299
No 187
>>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} (A:128-502)
Probab=33.19 E-value=35 Score=15.39 Aligned_cols=54 Identities=26% Similarity=0.218 Sum_probs=27.7
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCHH---------HHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 99850721289710165553335782213---------337889999986202696389972544
Q gi|254780438|r 86 LCERYKPEQITLVPDDPHQLTSDHGWDFL---------QNQALLTKTVARLHNLGSRISLFADGN 141 (261)
Q Consensus 86 ia~~ikP~qvtLVPe~r~elTTegGldv~---------~~~~~L~~~i~~l~~~girvSLFIDpd 141 (261)
-..+.-=+.|.|=|-- +-...+|+++. ...+.++..|+.+++.||+|=+=+-++
T Consensus 57 yl~~lGv~~I~l~P~~--~~~~~~gy~~~d~~~~~~~~G~~~~~k~lv~~~H~~Gi~vilD~v~n 119 (375)
T 1j0h_A 57 YLVDLGITGIYLTPIF--RSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFN 119 (375)
T ss_dssp HHHHHTCCEEEECCCE--ECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHCCCCEEEECCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 9987799889979987--79887898856767758355999999999999998799899987235
No 188
>>2pc8_A Hypothetical protein XOG1; EXO-glucanase, carbohydrate binding, additional CH binding site, hydrolase; HET: BGC; 1.80A {Candida albicans} PDB: 2pb1_A* 2pbo_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A (A:)
Probab=33.12 E-value=35 Score=15.39 Aligned_cols=16 Identities=25% Similarity=0.231 Sum_probs=11.5
Q ss_pred CCCCCCHHHHHHHHHH
Q ss_conf 8334888999998874
Q gi|254780438|r 48 DQRHIRYTDLPEIRRL 63 (261)
Q Consensus 48 DrRHI~~~Dv~~l~~~ 63 (261)
+..+++++|+..+++.
T Consensus 71 ~~~~~~~~Di~~~~~~ 86 (400)
T 2pc8_A 71 WSTWITEQDFKQISNL 86 (400)
T ss_dssp HHHSSCHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHC
T ss_conf 8733889999999976
No 189
>>1d8w_A L-rhamnose isomerase; beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift; 1.60A {Escherichia coli} (A:)
Probab=33.11 E-value=35 Score=15.38 Aligned_cols=220 Identities=11% Similarity=0.030 Sum_probs=109.0
Q ss_pred CCCHHHHHHHHHH-----CCCCEEEEECCCC-------CCCCCHHHHHHHHHHHCCCCCCCEEEEEE-------------
Q ss_conf 8998999999997-----4998999824788-------33488899999887400013674158883-------------
Q gi|254780438|r 23 WPNLVHIGKIALQ-----SGASGLTVHPRPD-------QRHIRYTDLPEIRRLIDEQFPKAELNIEG------------- 77 (261)
Q Consensus 23 ~P~~~~~a~~~~~-----~GadgITvH~R~D-------rRHI~~~Dv~~l~~~~~~~~~~~elNiEg------------- 77 (261)
..++.+....+.. .|.+++.+|...+ ...+.++++..+++.+... ++++..=.
T Consensus 76 ~~~~~e~~~~~~~~~~~~~G~~~vel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gl~i~~~~~~~~~~~~~~~~~ 153 (426)
T 1d8w_A 76 ARNASELRADLEQAXRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKAN--QLGLDFNPSCFSHPLSADGFT 153 (426)
T ss_dssp CCSHHHHHHHHHHHHHTSCSCEEEEEEGGGCCCSSCCCGGGCCGGGGHHHHHHHHHT--TCEEEEECCCSSSGGGTTSCS
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCC
T ss_conf 899899998899999855899851132433026886640104878789999999982--987686865557843235886
Q ss_pred --CCCH-----------HHHHHHHHHCCCEEEEEECCC-CC-CCCCCCCCHHHHHHHHHHHHHHHCCC---CCEEEEEEC
Q ss_conf --4856-----------899999850721289710165-55-33357822133378899999862026---963899725
Q gi|254780438|r 78 --YPNE-----------TFLNLCERYKPEQITLVPDDP-HQ-LTSDHGWDFLQNQALLTKTVARLHNL---GSRISLFAD 139 (261)
Q Consensus 78 --~p~~-----------e~i~ia~~ikP~qvtLVPe~r-~e-lTTegGldv~~~~~~L~~~i~~l~~~---girvSLFID 139 (261)
+|.+ +.++++...--..+++.|-.. .. -..+.+.+.....+.+.+.+..+-+. .--|-+.|+
T Consensus 154 ~~~~D~~~r~~ai~~~k~~ie~a~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~~a~e~~gv~l~iE 233 (426)
T 1d8w_A 154 LSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVXNIWIPDGXKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVE 233 (426)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECCCCEESSCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 57988899999999989999999999754278721577658767678857563999999999999873577454044533
Q ss_pred CCCC---------CHHHHHHHHCCCCE--EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC------
Q ss_conf 4444---------14799997406614--651121110244435643366688999876654156235207898------
Q gi|254780438|r 140 GNGN---------EHSLQAAKLTGADC--IELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL------ 202 (261)
Q Consensus 140 pd~~---------q~~i~~a~~~Gad~--VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL------ 202 (261)
|-|. .........++-+. +-+=||++... . .. ...+.....+..-..+.+|-|.+-
T Consensus 234 ~~~~~~~~~~~t~~~~~~l~~~~~~~~~gl~lD~gH~~~~---~-~~---~~~i~~~~~~~~l~hih~~d~~~~d~~~~~ 306 (426)
T 1d8w_A 234 SKLFGIGAESYTVGSNEFYXGYATSRQTALCLDAGHFHPT---E-VI---SDKISAAXLYVPQLLLHVSRPVRWDSDHVV 306 (426)
T ss_dssp CCSCBTTBCSEESSCHHHHHHHHHHHTCEEEEETTSSCTT---C-CH---HHHHHHHTTTSSCEEEEECBCSSSSCCBCC
T ss_pred HCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEECCCCCCC---C-CH---HHHHHHHHHHCCCEEEECCCCCCCCCCEEE
T ss_conf 0124566303550558888886336894798647988897---8-69---999999998466615763898555676033
Q ss_pred -----CHHHHHHHHHHCCCCEEEEEHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----987799999736996388425999------99999940999999999999741056
Q gi|254780438|r 203 -----TIQNIPNLINAIPYISEISVGHAF------AATALECGVKEAVFCFRRACGQHLDN 252 (261)
Q Consensus 203 -----n~~Nl~~~i~~Ip~I~EvsIGHai------IseAl~~GL~~aI~~~~~ii~~~~~~ 252 (261)
++.-+.. +....+-.-+++...- -.+++..++...-..|.+.+...++.
T Consensus 307 g~g~~~~~~~~~-L~~~gy~G~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 366 (426)
T 1d8w_A 307 LLDDETQAIASE-IVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNXKKALLRALLEPTAE 366 (426)
T ss_dssp CSSHHHHHHHHH-HHHTTGGGTEEEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred CCCHHHHHHHHH-HHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 044899999999-985456453101100344046569999999999999999986589999
No 190
>>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A (A:173-284)
Probab=32.90 E-value=35 Score=15.36 Aligned_cols=44 Identities=16% Similarity=0.069 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCHHH-HHHHHCCCCEEEEC
Q ss_conf 7889999986202696389972544441479-99974066146511
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFADGNGNEHSL-QAAKLTGADCIELY 161 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFIDpd~~q~~i-~~a~~~Gad~VElh 161 (261)
...|+.+++.+++.++++ +|.+|..+.+.+ ..+.++|+..+.++
T Consensus 37 ~~~l~~l~~~ik~~~i~~-i~~e~~~~~~~~~~la~~~~~~~~~ld 81 (112)
T 2prs_A 37 AQRLHEIRTQLVEQKATC-VFAEPQFRPAVVESVARGTSVRMGTLD 81 (112)
T ss_dssp HHHHHHHHHHHHHTTCCE-EEECTTSCSHHHHHHTTTSCCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 889999999877349838-999688892999999998099779844
No 191
>>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} (A:1-126)
Probab=32.75 E-value=36 Score=15.35 Aligned_cols=89 Identities=13% Similarity=0.131 Sum_probs=51.8
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHH
Q ss_conf 28971016555333578221333788999998620269638997254444147999974066146511211102444356
Q gi|254780438|r 94 QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQ 173 (261)
Q Consensus 94 qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~ 173 (261)
+..++|-.|..-+ =.|..+-.+ +..+...=--+.+|+-|+.....++.+.+.|+..+=+.+|-|+.......
T Consensus 36 ~~~V~pVnp~~~~-i~g~~~y~s-------l~el~~~~D~v~i~~p~~~~~~~v~e~~~~gi~~ii~~~~g~~e~~~~~~ 107 (126)
T 2csu_A 36 KGKVYPVNIKEEE-VQGVKAYKS-------VKDIPDEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGK 107 (126)
T ss_dssp SSEEEEECSSCSE-ETTEECBSS-------TTSCSSCCSEEEECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHH
T ss_pred CCCEEEECCCCCE-ECCEECCCC-------HHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH
T ss_conf 9618997899860-798757699-------88869998989999778998999999998499889971677665454106
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 43366688999876654156235
Q gi|254780438|r 174 QERIFLNKLAITAQLAQKMDLQI 196 (261)
Q Consensus 174 ~~~~el~~i~~aa~~A~~lgL~V 196 (261)
..+.+ + ...|+..|+.+
T Consensus 108 ~~~~~---~---~~~a~~~g~rl 124 (126)
T 2csu_A 108 REEKE---L---VEIAHKYGXRI 124 (126)
T ss_dssp HHHHH---H---HHHHHHHTCEE
T ss_pred HHHHH---H---HHHHHHCCCEE
T ss_conf 89999---9---99886269748
No 192
>>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} (A:54-328,A:445-458)
Probab=32.48 E-value=36 Score=15.32 Aligned_cols=192 Identities=14% Similarity=0.033 Sum_probs=124.8
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH----HHHHHHHHHCCCEEEEE
Q ss_conf 89989999999974998999824788334888999998874000136741588834856----89999985072128971
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE----TFLNLCERYKPEQITLV 98 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~----e~i~ia~~ikP~qvtLV 98 (261)
--|.....+-|...|.-.|...|+.+.-=...+.+...++..... ..+-+.+-+..+. ...++........+.+.
T Consensus 18 ~ed~~t~t~aA~~GGvTti~~mpn~~p~~~~~~~~~~~~~~~~~~-s~vd~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 96 (289)
T 1gkp_A 18 KDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGN-SYCDYTFHMAVSKFDEKTEGQLREIVADGISSFX 96 (289)
T ss_dssp SCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTT-CSSEEEEEEECCCCCTTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf 346899999998689128950578886420145555444321133-2123321110134333332211000004543001
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH----HHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799----99740661465112111024443564
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQ----AAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~----~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
--+|.+|.-+ .+...|..+.+..+..|..+++--+ |.+. +. ..+.-|- +++...+-..+
T Consensus 97 -----~~~s~~~~~~-~d~~~l~~~l~~~~~~g~~v~vH~E-d~~l--~~~~~~~~~~~g~------~~~~~~~~~rp-- 159 (289)
T 1gkp_A 97 -----IFLSYKNFFG-VDDGEMYQTLRLAKELGVIVTAHCE-NAEL--VGRLQQKLLSEGK------TGPEWHEPSRP-- 159 (289)
T ss_dssp -----EEECSTTTTB-CCHHHHHHHHHHHHHHTCEEEEEES-CHHH--HHHHHHHHHHTTC------CSGGGTTTTSC--
T ss_pred -----CCCCCCCCCC-CHHHHHHHHHHHHHCCCCCEEEEHH-HHHH--HHHHHHHHHHCCC------CCCCCCCCCCC--
T ss_conf -----1111123322-1035667666554215862133223-4666--7766555553376------43112355563--
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH-----CCCCEEEEEHHHHHHHHHHH
Q ss_conf 336668899987665415623520789898779999973-----69963884259999999994
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINA-----IPYISEISVGHAFAATALEC 233 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~-----Ip~I~EvsIGHaiIseAl~~ 233 (261)
...|...+.....+|...|..++.-|==+-+.+.. |.. ++--.|+++-|-+..+.-+.
T Consensus 160 ~~aE~~ai~~~~~la~~~~~~i~i~HiSt~~al~~-I~~ak~~g~~v~~Et~ph~L~l~~~~~~ 222 (289)
T 1gkp_A 160 EAVEAEGTARFATFLETTGATGYVVHLSCKPALDA-AMAAKARGVPIYIESVIPHFLLDKTYAE 222 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEECSCCSHHHHHH-HHHHHHTTCCEEEEEEHHHHHCCGGGGG
T ss_pred HHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHH-HHHHHCCCCCCCCCCCCCHHHHCHHHHH
T ss_conf 25677654311222223211000122222002444-4432103542112222102220001111
No 193
>>1vli_A Spore coat polysaccharide biosynthesis protein SPSE; 2636322, structural genomics, JCSG, protein structure initiative, BSU37870, PSI; 2.38A {Bacillus subtilis} (A:1-300)
Probab=32.21 E-value=36 Score=15.29 Aligned_cols=128 Identities=5% Similarity=-0.055 Sum_probs=62.4
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH-----------------HHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 8999998507212897101655533357822133-----------------37889999986202696389972544441
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQ-----------------NQALLTKTVARLHNLGSRISLFADGNGNE 144 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~-----------------~~~~L~~~i~~l~~~girvSLFIDpd~~q 144 (261)
+|++-+.+.--+.|-+=.=++++++++....... ..+.+....+..++.|+.+..=+ .+.
T Consensus 48 ~~i~~a~~aGadavKfQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~L~~~~~~~Gi~~~st~---fd~ 124 (300)
T 1vli_A 48 ALIDAAAEAGADAVKFQXFQADRXYQKDPGLYKTAAGKDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTV---CDE 124 (300)
T ss_dssp HHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBC---CSH
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHCCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECC---CCH
T ss_conf 99999998098999911506787078863424567788864310222102103455555444321343011012---202
Q ss_pred HHHHHHHHCCCCEEEECCCCCHHHHHHHH-----------HHHHHHHHHHHHHHHHHHCC----CEEEEC-------CCC
Q ss_conf 47999974066146511211102444356-----------43366688999876654156----235207-------898
Q gi|254780438|r 145 HSLQAAKLTGADCIELYTGPYGACYNNPQ-----------QERIFLNKLAITAQLAQKMD----LQINAG-------HDL 202 (261)
Q Consensus 145 ~~i~~a~~~Gad~VElhTG~Ya~a~~~~~-----------~~~~el~~i~~aa~~A~~lg----L~VnAG-------HgL 202 (261)
.+++.+.++|+|.+-+-.+.--+..--.. .--..++.+..+.++..+.| .-+|.| .++
T Consensus 125 ~~vd~l~~~~v~~~KI~S~~~~n~~LL~~~A~tgkPvilstG~~t~~ei~~Av~~~~~~Gn~~l~Llhc~s~YP~~~~~~ 204 (300)
T 1vli_A 125 GSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPXIFSTAGAEISDVHEAWRTIRAEGNNQIAIXHCVAKYPAPPEYS 204 (300)
T ss_dssp HHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGC
T ss_pred HHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
T ss_conf 44431012122111203323344699999986089610211033456678899888763156579986025677862000
Q ss_pred CHHHHHHHHH
Q ss_conf 9877999997
Q gi|254780438|r 203 TIQNIPNLIN 212 (261)
Q Consensus 203 n~~Nl~~~i~ 212 (261)
|+..+..+-+
T Consensus 205 nL~~i~~lk~ 214 (300)
T 1vli_A 205 NLSVIPXLAA 214 (300)
T ss_dssp CTTHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 0234444444
No 194
>>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, protein structure initiative; 2.00A {Bacillus halodurans c-125} (A:1-128)
Probab=32.03 E-value=37 Score=15.27 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=68.4
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH-HHHHHH--HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3348889999988740001367415888348568-999998--5072128971016555333578221333788999998
Q gi|254780438|r 49 QRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET-FLNLCE--RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVA 125 (261)
Q Consensus 49 rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e-~i~ia~--~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~ 125 (261)
-|-++.+|+..+.++....+..........+.++ ..+... ...|...++|-+.-+++.--.++........
T Consensus 7 iR~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~~~------ 80 (128)
T 1z4e_A 7 IREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTY------ 80 (128)
T ss_dssp EEECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHH------
T ss_pred EEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCCC------
T ss_conf 99799999999999999876523002346777178999999987098854999998996899999994034576------
Q ss_pred HHCCCCCEEEEEECCCCCC---------HHHHHHHHCCCCEEEECCC
Q ss_conf 6202696389972544441---------4799997406614651121
Q gi|254780438|r 126 RLHNLGSRISLFADGNGNE---------HSLQAAKLTGADCIELYTG 163 (261)
Q Consensus 126 ~l~~~girvSLFIDpd~~q---------~~i~~a~~~Gad~VElhTG 163 (261)
.-...+--.+++|+|+--- ..++.|++.|+..|.++|-
T Consensus 81 ~~~~~~~i~~~~v~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~ 127 (128)
T 1z4e_A 81 QGSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTD 127 (128)
T ss_dssp HHCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 78878999888867767599931789999999999705888999986
No 195
>>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix} (A:)
Probab=32.01 E-value=37 Score=15.27 Aligned_cols=39 Identities=21% Similarity=0.206 Sum_probs=18.2
Q ss_pred HHHHHHHHHHCCCCEEEEE---CCCCC---CCCCHHHHHHHHHHH
Q ss_conf 8999999997499899982---47883---348889999988740
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVH---PRPDQ---RHIRYTDLPEIRRLI 64 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH---~R~Dr---RHI~~~Dv~~l~~~~ 64 (261)
..+.+..+.++||+.+-+- ||.+. +..-.+....|.+.+
T Consensus 54 a~~~i~~l~~~Ga~~vk~q~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (276)
T 1vs1_A 54 VREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAG 98 (276)
T ss_dssp HHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999853554333100356786100000356889998765
No 196
>>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica hm-1} PDB: 3bm5_A* (A:55-163)
Probab=31.84 E-value=37 Score=15.25 Aligned_cols=43 Identities=14% Similarity=-0.014 Sum_probs=35.5
Q ss_pred HHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 9986202696389972544441479999740661465112111
Q gi|254780438|r 123 TVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 123 ~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
+---.+..|+++-+|++.+..+.-++..+..||+.+.+-.|.+
T Consensus 39 lA~~a~~~g~~~~vv~p~~~~~~k~~~l~~~GA~V~~v~~~~~ 81 (109)
T 2pqm_A 39 LCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGKKG 81 (109)
T ss_dssp HHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGH
T ss_pred HHHHHHHHCCCCCCHHHCCCCHHHHHHHHCCCCCCEEECCCCC
T ss_conf 8999998513520122113566765422035764101035566
No 197
>>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} (A:295-566)
Probab=31.78 E-value=37 Score=15.24 Aligned_cols=126 Identities=13% Similarity=0.075 Sum_probs=77.1
Q ss_pred CCCH-HHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCH---HHHHHHHHHHCCCCCCCEEEEE------
Q ss_conf 2214-43223220788689989999999974998999824788334888---9999988740001367415888------
Q gi|254780438|r 7 VNLN-AVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRY---TDLPEIRRLIDEQFPKAELNIE------ 76 (261)
Q Consensus 7 VNid-hiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~---~Dv~~l~~~~~~~~~~~elNiE------ 76 (261)
+|+. .=..-.-.+..+.-..++.|....+.|||=|-+-.=.+..-=.+ .=|..+++.. ++++-|.
T Consensus 28 lN~t~~dsf~d~~~~~~~~~~~~~a~~~~~~GAdiIDig~~~~~~~E~~~l~~~v~~l~~~~-----~ipisIDT~~~~v 102 (272)
T 1q7z_A 28 INPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVS-----NVPLSLDIQNVDL 102 (272)
T ss_dssp ECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHT-----CSCEEEECCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC-----CCCEEECCCCHHH
T ss_conf 35421777999987443778999999999869987862167641156999999999998538-----9874765787999
Q ss_pred ------------------EC--CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf ------------------34--8568999998507212897101655533357822133378899999862026963899
Q gi|254780438|r 77 ------------------GY--PNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 77 ------------------g~--p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL 136 (261)
|. ..++|..++.++....|++--+...+-. +..-..++...++.+...|++--+
T Consensus 103 ~e~aL~~~~G~~iINsis~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~------~~e~~~~~~~~~~~~~~~Gi~~~I 176 (272)
T 1q7z_A 103 TERALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKS------FEERKEYFEKALKILERHDFSDRV 176 (272)
T ss_dssp HHHHHHHCSSCCEEEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCS------HHHHHHHHHHHHHHHHHTTCGGGE
T ss_pred HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCH------HHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 99999961899726631576314799999998649779998537655301------899999999999999956998677
Q ss_pred EECCCCC
Q ss_conf 7254444
Q gi|254780438|r 137 FADGNGN 143 (261)
Q Consensus 137 FIDpd~~ 143 (261)
.+||...
T Consensus 177 i~DPg~~ 183 (272)
T 1q7z_A 177 IFDPGVL 183 (272)
T ss_dssp EEECCCC
T ss_pred EEECCCE
T ss_conf 9979803
No 198
>>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} (A:)
Probab=31.61 E-value=37 Score=15.22 Aligned_cols=188 Identities=11% Similarity=0.026 Sum_probs=103.2
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC--C-HHHHHHHHHHCCCEEEEE
Q ss_conf 6899899999999749989998247883348889999988740001367415888348--5-689999985072128971
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP--N-ETFLNLCERYKPEQITLV 98 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p--~-~e~i~ia~~ikP~qvtLV 98 (261)
...+...++..+...|++.++.=.-...-.....+- ........ ..+.++-... + ++..+.+..+.....|-+
T Consensus 21 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (264)
T 1xm3_A 21 KYPSFDIQKEAVAVSESDILTFAVRRXNIFEASQPN--FLEQLDLS--KYTLLPNTAGASTAEEAVRIARLAKASGLCDX 96 (264)
T ss_dssp CSSCHHHHHHHHHHHTCSEEEEETTSSTTC---------CTTCCGG--GSEEEEECTTCSSHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHH--HHHHHCCC--CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 999999999999986998799999766277887357--88763014--46863550887339999999999998018974
Q ss_pred ECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 0165553335782213-337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 99 PDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 99 Pe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
+..... .+|-... ...+.++.+....+ ..+.+..-..++.+ ....+.+.|+|.|=+|-|.--.......
T Consensus 97 ~~~~~~---~~~~~~~~~~~~~i~~~~~~~~-~~~~v~~~~~~~~~--~a~~~~~~g~d~i~~~g~~~~~~~g~~~---- 166 (264)
T 1xm3_A 97 IKVEVI---GCSRSLLPDPVETLKASEQLLE-EGFIVLPYTSDDVV--LARKLEELGVHAIXPGASPIGSGQGILN---- 166 (264)
T ss_dssp EEECCB---CCTTTCCBCHHHHHHHHHHHHH-TTCCEEEEECSCHH--HHHHHHHHTCSCBEECSSSTTCCCCCSC----
T ss_pred EEEEEE---CCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEECCCHH--HHHHHHHCCCCEEEEEHHHHCCCCCCCC----
T ss_conf 799994---4887769884678999999986-89769997268999--9999986488321100003116888578----
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHH
Q ss_conf 6688999876654156235207898-987799999736996388425999999
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAAT 229 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIse 229 (261)
+.-+ .+.+....+-|=|.=|. |.+-+.+.++ -+.+-|.||-+++..
T Consensus 167 -~~~i---~~v~~~~~ipvia~GGI~~~~di~~al~--lGAd~V~iGt~~l~~ 213 (264)
T 1xm3_A 167 -PLNL---SFIIEQAKVPVIVDAGIGSPKDAAYAXE--LGADGVLLNTAVSGA 213 (264)
T ss_dssp -HHHH---HHHHHHCSSCBEEESCCCSHHHHHHHHH--TTCSEEEESHHHHTS
T ss_pred -HHHH---HHHHHCCCEEEEEECCCCCHHHHHHHHH--HCCCEEEECHHHHCC
T ss_conf -7899---9998548868997068899899999997--008999943466618
No 199
>>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, enzyme kinetics, X-RAY diffraction; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A* (A:38-146)
Probab=31.60 E-value=37 Score=15.22 Aligned_cols=49 Identities=16% Similarity=0.113 Sum_probs=37.7
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCC-CCHHHHH
Q ss_conf 999862026963899725444414799997406614651121-1102444
Q gi|254780438|r 122 KTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTG-PYGACYN 170 (261)
Q Consensus 122 ~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG-~Ya~a~~ 170 (261)
.+---.+..|+++-+|+..+.++..++..+..|++.+..-.| .|.+++.
T Consensus 38 alA~~a~~~g~~~~iv~p~~~~~~k~~~l~~~Ga~V~~v~~~~~~~~~~~ 87 (109)
T 2v03_A 38 ALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARD 87 (109)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTTTHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf 99999997698704521255126766999985897630003532146788
No 200
>>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri} (A:86-215)
Probab=31.32 E-value=38 Score=15.19 Aligned_cols=97 Identities=16% Similarity=0.152 Sum_probs=58.2
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCE-EEEE-ECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 788334888999998874000136741-5888-34856899999850721289710165553335782213337889999
Q gi|254780438|r 46 RPDQRHIRYTDLPEIRRLIDEQFPKAE-LNIE-GYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKT 123 (261)
Q Consensus 46 R~DrRHI~~~Dv~~l~~~~~~~~~~~e-lNiE-g~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~ 123 (261)
=+...|---..+ +...+... .-+ .++- ..|.++|++.+.+.+|+.|+|.=- .+ ...+...++.+
T Consensus 15 ~~gd~H~lG~~~--v~~~l~~~--G~~V~~LG~~~p~e~l~~~~~~~~~d~V~ls~S---------~~-~~~~~~~~~~~ 80 (130)
T 3ezx_A 15 AEGDIHDIGHRL--VTTMLGAN--GFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGS---------AL-MTTSMLGQKDL 80 (130)
T ss_dssp CTTCCCCHHHHH--HHHHHHHT--SCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEE---------CS-SHHHHTHHHHH
T ss_pred CCCCHHHHHHHH--HHHHHHHC--CCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEE---------CC-CCCCHHHHHHH
T ss_conf 699777899999--99999977--997997888999999999999819880478742---------45-65336989999
Q ss_pred HHHHCCCCCE--EEEEECCCCCCHHHHHHHHCCCCEE
Q ss_conf 9862026963--8997254444147999974066146
Q gi|254780438|r 124 VARLHNLGSR--ISLFADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 124 i~~l~~~gir--vSLFIDpd~~q~~i~~a~~~Gad~V 158 (261)
++.+++.+.+ +-+++---+- .-+.+.++|+|.+
T Consensus 81 ~~~l~~~~~~~~i~v~vGG~~~--~~~~~~~~Gad~~ 115 (130)
T 3ezx_A 81 MDRLNEEKLRDSVKCMFGGAPV--SDKWIEEIGADAT 115 (130)
T ss_dssp HHHHHHTTCGGGSEEEEESSSC--CHHHHHHHTCCBC
T ss_pred HHHHHHCCCCCCCEEEEECCCC--CHHHHHHHCCCEE
T ss_conf 9999981888899499889028--9999998398878
No 201
>>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa PAO1} (A:)
Probab=30.91 E-value=38 Score=15.14 Aligned_cols=184 Identities=8% Similarity=-0.007 Sum_probs=107.6
Q ss_pred HHHHH---CCCCC--CCCHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
Q ss_conf 22322---07886--899899999999749989998-2478833488899999887400013674158883485689999
Q gi|254780438|r 13 AVLRN---RRNLP--WPNLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNL 86 (261)
Q Consensus 13 AtLRn---aRg~~--~P~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~i 86 (261)
.|||. +-|.. ....+..+....++|.+.|-+ +|---.+..+..+-...... ........---..+...-++.
T Consensus 14 ~TlRDG~Q~~~~~~~~~~k~~i~~~l~~~Gv~~iE~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 91 (302)
T 2ftp_A 14 VGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAG--IRQRPGVTYAALAPNLKGFEA 91 (302)
T ss_dssp CTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHH--SCCCTTSEEEEECCSHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHC--CCCCHHHHHHHHHHCCHHHHH
T ss_conf 998765768999889999999999999729999998887586623777659999962--674205677788640069999
Q ss_pred HHHHCCCEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------------CCCCCHHHHHHHHC
Q ss_conf 985072128971-01655533357822133378899999862026963899725------------44441479999740
Q gi|254780438|r 87 CERYKPEQITLV-PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------------GNGNEHSLQAAKLT 153 (261)
Q Consensus 87 a~~ikP~qvtLV-Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------------pd~~q~~i~~a~~~ 153 (261)
+.......+-++ |-.+.-++.-.+.+.....+.+.++++..++.|.++..-+. |+.-...++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (302)
T 2ftp_A 92 ALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQM 171 (302)
T ss_dssp HHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHT
T ss_pred HHHCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98459988999863249999987533699998767899999986201000101313556655521099999999999860
Q ss_pred CCCEEEECCCCCHHHHH--HHHHHHHHHHHHHHHHHHHH-HCCCEE--EECCCCCHHHH
Q ss_conf 66146511211102444--35643366688999876654-156235--20789898779
Q gi|254780438|r 154 GADCIELYTGPYGACYN--NPQQERIFLNKLAITAQLAQ-KMDLQI--NAGHDLTIQNI 207 (261)
Q Consensus 154 Gad~VElhTG~Ya~a~~--~~~~~~~el~~i~~aa~~A~-~lgL~V--nAGHgLn~~Nl 207 (261)
|+|+|-|- +... .|.+.. .+.....-.. +.-+++ |-.-||-.-|.
T Consensus 172 g~d~i~l~-----Dt~G~~~P~~v~----~li~~~~~~~~~i~i~~H~Hnd~Gla~An~ 221 (302)
T 2ftp_A 172 GCYEVSLG-----DTIGVGTAGATR----RLIEAVASEVPRERLAGHFHDTYGQALANI 221 (302)
T ss_dssp TCSEEEEE-----ESSSCCCHHHHH----HHHHHHTTTSCGGGEEEEEBCTTSCHHHHH
T ss_pred CCCEEECC-----CCHHCCCCHHHH----HHHHHHHHCCCCCCEEEECCCCCCHHHHHH
T ss_conf 57043147-----613103827899----999888741777635775167654699999
No 202
>>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} (A:75-347,A:460-473)
Probab=30.78 E-value=38 Score=15.13 Aligned_cols=202 Identities=12% Similarity=0.001 Sum_probs=135.6
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH-HHHHHCCCCCCCEEEEEECCC----HHHHHHHHHHCCCEEE
Q ss_conf 68998999999997499899982478833488899999-887400013674158883485----6899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPE-IRRLIDEQFPKAELNIEGYPN----ETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg~p~----~e~i~ia~~ikP~qvt 96 (261)
.-=++....+-|...|.-.+...|......+....... ..+.. +....+.+.+=+..+ +++.++..........
T Consensus 15 ~~ed~~t~s~aAa~GGvTtvi~mpn~~~p~~~~~~~l~~~~~~~-~~~s~vd~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 93 (287)
T 3e74_A 15 HWEGYETGTRAAAKGGITTXIEXPLNQLPATVDRASIELKFDAA-KGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFXC 93 (287)
T ss_dssp ---CHHHHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHH-TTTCSSEEEECEECCTTCTTTHHHHHHHTCSCEEE
T ss_pred CHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 25579999999985882576336666643211077777887764-04641123210012454214677765411124201
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC--HHHHHHHHCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 710165553335782213337889999986202696389972544441--479999740661465112111024443564
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE--HSLQAAKLTGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q--~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
.+=......++++|..+ +...|.++.+..++.|..+++.-+ |.+. ...+..++-|...-+. +.....
T Consensus 94 ~~~~~~~~~~~~~~~~~--~~~~l~~~l~~~~~~g~~v~~H~E-d~~l~~~~~~~~~~~g~~~~~~--------~~~~rP 162 (287)
T 3e74_A 94 FVATCGDRGIDNDFRDV--NDWQFFKGAQKLGELGQPVLVHCE-NALICDELGEEAKREGRVTAHD--------YVASRP 162 (287)
T ss_dssp EC------------CCC--CHHHHHHHHHHHHHHTCCEEEECS-CHHHHHHHHHHHHHHTCCSHHH--------HHHTSC
T ss_pred EECCCCCCCCCCCCCCH--HHHHHHHHHHHHHHCCCCEEEECC-CHHHHHHHHCCCCCCCCCCCCC--------CCCHHH
T ss_conf 10245764212322212--599999999864222871344202-1555533201221222332345--------530124
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH-----CCCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 336668899987665415623520789898779999973-----69963884259999999994099
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINA-----IPYISEISVGHAFAATALECGVK 236 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~-----Ip~I~EvsIGHaiIseAl~~GL~ 236 (261)
...|...+.....+|...|..+|.-|=-+-+.+.. +.. .+---|+++-|-+..+..+.++.
T Consensus 163 ~~aE~~av~~~~~la~~~g~~ihi~Hist~~~l~~-i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~ 228 (287)
T 3e74_A 163 VFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEE-VTRARQEGQDITCESCPHYFVLDTDQFEEIG 228 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEECSCCSHHHHHH-HHHHHHTTCCEEEEECTHHHHCCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHH-HHHHHHCCCEEEEEECCCCCCCCCCHHHCCC
T ss_conf 67654336899999998599289973264567899-9876522761454301211222332000247
No 203
>>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus} (A:)
Probab=30.60 E-value=39 Score=15.11 Aligned_cols=128 Identities=12% Similarity=0.135 Sum_probs=78.7
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
Q ss_conf 99999850721289710165553335782213337889999986202696389972544441479999740661465112
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT 162 (261)
+.+...+...+.+++.=+--.-++.+.=..+ -.-.++++++.+++.|..+.+.++-+.. ..++...++|+|.+-+-.
T Consensus 184 ~~~~~~eag~d~i~~~d~~~~~lsp~~~~e~--~~P~~k~i~~~i~~~g~~~~~H~cG~~~-~~~~~~~e~g~d~~~~~~ 260 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWVNNLSLEDYGEY--VYPYVNYLISELKDFSDTPVIYFFRGSS-SFIDLAVDYRADALSVDW 260 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSCHHHHHHH--THHHHHHHHHHHHHHCCCCEEEEESSHH-HHHHHHTTSCCSEEECCT
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCHHHHHHH--HHHHHHHHHHHHHCCCCCCCEECCCCCC-CCCCCCCCCCCCCCCCCC
T ss_conf 9999986377745740544443687888777--7788999999875037986110467753-222332333322002233
Q ss_pred C-CCHHHHHH---------------HHHHHHHHHHHHHHHHHH-HHCCCEEEECCCC----CHHHHHHHHHHC
Q ss_conf 1-11024443---------------564336668899987665-4156235207898----987799999736
Q gi|254780438|r 163 G-PYGACYNN---------------PQQERIFLNKLAITAQLA-QKMDLQINAGHDL----TIQNIPNLINAI 214 (261)
Q Consensus 163 G-~Ya~a~~~---------------~~~~~~el~~i~~aa~~A-~~lgL~VnAGHgL----n~~Nl~~~i~~I 214 (261)
+ ++.++... ...+++ .+..++..+.. ..-|.-+..||++ ..+|+..++..+
T Consensus 261 ~~d~~e~~~~~g~~i~G~~~~~l~~gt~eev-~~~v~~~l~~~~~~ggfIl~~gc~i~~~~p~eni~A~~~a~ 332 (338)
T 2eja_A 261 SVDIPELFKIYDKGFQGNLEPAVLYASEEVI-EEKTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLV 332 (338)
T ss_dssp TSCHHHHHHHCCSEEECCBCGGGGGSCHHHH-HHHHHHHHTTCCCSSSEEBCBSSCCCTTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHCCCCEEECCCHHHHCCCHHHH-HHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 3489999986898369698847877999999-99999999966899997997999749899999999999999
No 204
>>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} (A:)
Probab=30.58 E-value=39 Score=15.11 Aligned_cols=64 Identities=16% Similarity=0.098 Sum_probs=41.2
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 016555333578221333788999998620269638997254444147999974066146511211102
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
|++.=-||=|-|++-. ...++..|++.|++...|+-.......-+..+++-.+-.||-.-.|.+
T Consensus 3 ~~~~v~LTfDDG~~~~-----~~~~l~~L~k~~i~aTff~~g~~~~~~~~~~~~~~~~Gheig~Ht~~H 66 (195)
T 2cc0_A 3 CNGYVGLTFDDGPSGS-----TQSLLNALRQNGLRATMFNQGQYAAQNPSLVRAQVDAGMWVANHSYTH 66 (195)
T ss_dssp CSEEEEEEEESCCSTT-----HHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTTCEEEECCSSC
T ss_pred CCCEEEEEEECCCCHH-----HHHHHHHHHHCCCCEEEEEECHHHHHCCHHHHHHHHCCCHHHHCCCCC
T ss_conf 8998999870798162-----999999999879938999967312317346666653020234311447
No 205
>>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), structural genomics, JCSG, PSI; 1.60A {Thermotoga maritima} (A:)
Probab=30.39 E-value=39 Score=15.09 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=25.9
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEE--EEECCCCCCCC
Q ss_conf 078868998999999997499899--98247883348
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGL--TVHPRPDQRHI 52 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgI--TvH~R~DrRHI 52 (261)
+.+...+|=+.+-..|.++||++| -|++-.|..=+
T Consensus 21 ~~~~~pENTl~a~~~A~~~Ga~~iE~DV~~TkDg~~v 57 (234)
T 1o1z_A 21 YSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVV 57 (234)
T ss_dssp TTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEE
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEE
T ss_conf 9999971059999999985989899888991699888
No 206
>>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum} (A:196-313)
Probab=30.29 E-value=39 Score=15.07 Aligned_cols=46 Identities=9% Similarity=0.018 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHHCCCCEEEECC
Q ss_conf 3788999998620269638997254444147999-9740661465112
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFADGNGNEHSLQA-AKLTGADCIELYT 162 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~-a~~~Gad~VElhT 162 (261)
....|+.+++.+++.++++ +|.+|..+.+.++. +.++|+..+.+..
T Consensus 36 s~~~l~~l~~~ik~~~v~~-if~e~~~~~~~~~~ia~~~~~~~~~l~p 82 (118)
T 1toa_A 36 SAHDMQELAAFIAQRKLPA-IFIESSIPHKNVEALRDAVQARGHVVQI 82 (118)
T ss_dssp CHHHHHHHHHHHHHTTCSE-EEEETTSCTHHHHHHHHHHHTTTCCCEE
T ss_pred HHHHHHHHHHHHHHCCCCE-EEEECCCCCHHHHHHHHHHCCCCEEECC
T ss_conf 1479999999998649968-9984899908999999985788413255
No 207
>>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant 1; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 1.90A {Ehrlichia chaffeensis} (A:1-38,A:120-217)
Probab=29.94 E-value=39 Score=15.03 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=41.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 33578221333788999998620269638997254444147999974066146511211102
Q gi|254780438|r 106 TSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 106 TTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
+++-.---+.+.+.+..+.+++.-.-.+-.+||+-.+. .+.+|+++|++.|=+-+|....
T Consensus 70 ~sd~~~~~KP~p~~f~~~l~~lgl~p~ee~l~VGDs~~--DI~aA~~aGi~tI~V~~g~~~~ 129 (136)
T 3kzx_A 70 GSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSIS--DIQSAIEAGCLPIKYGSTNIIK 129 (136)
T ss_dssp EETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHH--HHHHHHHTTCEEEEECC-----
T ss_pred ECCCCCCCCCCHHHHHHHHHHHCCCHHHCEEEEECCHH--HHHHHHHCCCEEEEECCCCCCH
T ss_conf 61003267996999999999909694675499957887--8999998499899989999862
No 208
>>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134} (A:1-129)
Probab=29.86 E-value=5.4 Score=21.00 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=61.5
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEEECCC--HHHHHHHH--HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3488899999887400013674158883485--68999998--5072128971016555333578221333788999998
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQFPKAELNIEGYPN--ETFLNLCE--RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVA 125 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia~--~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~ 125 (261)
|.++.+|+..+.++....+.......+..+. +.+.+... --.|...++|-+..+++--=.++........ ....
T Consensus 5 R~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~~~~~~~~--~~~~ 82 (129)
T 2q0y_A 5 RPLCIDDLELVCRHREAXFREAGRDALTLAAXQDPFRDWLLPRLADGSYFGWVXEEGGAPLAGIGLXVIEWPPH--PSHP 82 (129)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTSSEEEEEEETTEEEEEEEEEEEECCCB--TTBT
T ss_pred EECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEEEEEECCCCCC--CCCC
T ss_conf 84898899999999999998735672024552499999999985269679999999999899988640246776--6777
Q ss_pred HHCCCCCEEEEEECCCCC---------CHHHHHHHHCCCCEEEECC
Q ss_conf 620269638997254444---------1479999740661465112
Q gi|254780438|r 126 RLHNLGSRISLFADGNGN---------EHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 126 ~l~~~girvSLFIDpd~~---------q~~i~~a~~~Gad~VElhT 162 (261)
.....+--.++||+|+-- +..++.|++.|+..|.|+|
T Consensus 83 ~~~~~~~i~~i~V~p~~rg~Gig~~L~~~~~~~a~~~g~~~i~L~t 128 (129)
T 2q0y_A 83 LQDKRGYILNLYVDPSHRERGIGQALXNRAEAEFAERGIAFAVLHA 128 (129)
T ss_dssp TCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEEEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 8898799999999606873796069999999998854994799960
No 209
>>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis} (A:1-330)
Probab=29.76 E-value=40 Score=15.01 Aligned_cols=112 Identities=13% Similarity=0.026 Sum_probs=61.0
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 99850721289710165553335782213337889999986202696389972544441479999740661465112111
Q gi|254780438|r 86 LCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 86 ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
...+...+-+++ ++....+-|.-=|. .--.-.++.++..+++.|+.+.+|---. ...++...++|+|.+-+-....
T Consensus 201 ~~~~~g~~~i~i-~d~~~~~isp~~~~-ef~~P~~k~i~~~i~~~g~~~i~~~g~~--~~~l~~l~~~g~d~~~~~~~~~ 276 (330)
T 2inf_A 201 AQIKAGAKAIQI-FDSWVGALNQADYR-TYIKPVMNRIFSELAKENVPLIMFGVGA--SHLAGDWHDLPLDVVGLDWRLG 276 (330)
T ss_dssp HHHHTTCSEEEE-ECTTGGGSCHHHHH-HHTHHHHHHHHHHHGGGCSCEEEECTTC--GGGHHHHHTSSCSEEECCTTSC
T ss_pred HHHHCCCCCCEE-CCCHHHHCCHHHHH-CCCCCHHHCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCEEECCCCCC
T ss_conf 998527762210-38277652266530-1001500113211123464334444322--1221101256751451254688
Q ss_pred HHHHHH-----------------HHHHHHHHHHHHHHH-HHHHHCCCEEEECCCC
Q ss_conf 024443-----------------564336668899987-6654156235207898
Q gi|254780438|r 166 GACYNN-----------------PQQERIFLNKLAITA-QLAQKMDLQINAGHDL 202 (261)
Q Consensus 166 a~a~~~-----------------~~~~~~el~~i~~aa-~~A~~lgL~VnAGHgL 202 (261)
.....+ ...+++ .+..+++. ..+..-|.-+..|||+
T Consensus 277 ~~~~k~~g~~~~i~G~i~~~~l~gt~eev-~~~v~~~l~~~~~~~gfIl~~gc~i 330 (330)
T 2inf_A 277 IDEARSKGITKTVQGNLDPSILLAPWEVI-EQKTKEILDQGMESDGFIFNLGHGV 330 (330)
T ss_dssp HHHHHHTTCCSEEECCBCGGGGGSCHHHH-HHHHHHHHHHHTTSSCEEBCBSSCC
T ss_pred HHHHHHHCCCEEEECCCCHHHHCCCHHHH-HHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf 69999738984688799957877999999-9999999998478999899699983
No 210
>>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain, alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} (A:)
Probab=29.72 E-value=40 Score=15.01 Aligned_cols=157 Identities=16% Similarity=0.172 Sum_probs=67.4
Q ss_pred CEEEEEECCCHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCC--CH
Q ss_conf 415888348568999998507--212897101655533357822133378899999862026-9638997254444--14
Q gi|254780438|r 71 AELNIEGYPNETFLNLCERYK--PEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRISLFADGNGN--EH 145 (261)
Q Consensus 71 ~elNiEg~p~~e~i~ia~~ik--P~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~-girvSLFIDpd~~--q~ 145 (261)
+..++.+..-+++..-+.... +..=-+----....+...|-.+.....++.++++.+++. +..+++-+-+.++ ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~a~~~g~d~iei~~~~~~~~~~g~~~~~~~~~~~~i~~~vr~~~~~~v~~k~~~~~~~~~~ 180 (311)
T 1ep3_A 101 IIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVP 180 (311)
T ss_dssp EEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
T ss_conf 89996179999999999998634298877214689984021877676999999999999722698759970432200899
Q ss_pred HHHHHHHCCCCEEEECCCCCHHHHH--H-----------HHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHH
Q ss_conf 7999974066146511211102444--3-----------5643366688999876654156235207898-987799999
Q gi|254780438|r 146 SLQAAKLTGADCIELYTGPYGACYN--N-----------PQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLI 211 (261)
Q Consensus 146 ~i~~a~~~Gad~VElhTG~Ya~a~~--~-----------~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i 211 (261)
....+.+.|++.++++.......+. . .......-..+...........+-|=+.-|+ +.+...+.+
T Consensus 181 ~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~pvi~~Ggi~~~~d~~~al 260 (311)
T 1ep3_A 181 IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMY 260 (311)
T ss_dssp HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
T ss_conf 99999984998399992145521211467621045568767655537899999999751681299969959999999999
Q ss_pred HHCCCCEEEEEHHHHHHH
Q ss_conf 736996388425999999
Q gi|254780438|r 212 NAIPYISEISVGHAFAAT 229 (261)
Q Consensus 212 ~~Ip~I~EvsIGHaiIse 229 (261)
+ .+.+=|.||-+++++
T Consensus 261 ~--~GaD~V~igr~~l~~ 276 (311)
T 1ep3_A 261 M--AGASAVAVGTANFAD 276 (311)
T ss_dssp H--HTCSEEEECTHHHHC
T ss_pred H--CCCCEEEECHHHHHC
T ss_conf 8--499999975887709
No 211
>>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} PDB: 3l6r_A* 3hmk_A* 3l6c_A* (A:73-154)
Probab=29.50 E-value=40 Score=14.98 Aligned_cols=49 Identities=10% Similarity=-0.071 Sum_probs=36.8
Q ss_pred HHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHH
Q ss_conf 99862026963899725444414799997406614651121110244435
Q gi|254780438|r 123 TVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNP 172 (261)
Q Consensus 123 ~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~ 172 (261)
+-.-.+..|+++-+|+..+..+.-++..+..||+. ..+.|.|.+++...
T Consensus 19 ~A~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~V-i~~~~~~~~~~~~a 67 (82)
T 3l6b_A 19 LTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASI-VYCEPSDESRENVA 67 (82)
T ss_dssp HHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEE-EEECSSHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCE-EECCCCHHHHHHHH
T ss_conf 99999985998655686056789988875168743-87055045666666
No 212
>>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} (A:)
Probab=29.36 E-value=40 Score=14.97 Aligned_cols=195 Identities=9% Similarity=0.018 Sum_probs=112.2
Q ss_pred HHHH-----CCCCCCCCHHHHHHHHHHCCCCEEEE----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
Q ss_conf 2322-----07886899899999999749989998----24788334888999998874000136741588834856899
Q gi|254780438|r 14 VLRN-----RRNLPWPNLVHIGKIALQSGASGLTV----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFL 84 (261)
Q Consensus 14 tLRn-----aRg~~~P~~~~~a~~~~~~GadgITv----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i 84 (261)
|||. ...-.....+..+....++|.+.|-+ ++..+.+=++............ ....- -..+...=+
T Consensus 12 TlRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~iE~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~ 86 (298)
T 2cw6_A 12 GPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFP----GINYP-VLTPNLKGF 86 (298)
T ss_dssp TTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCT----TCBCC-EECCSHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH----HHHHH-HHHHHHHHH
T ss_conf 9753364989998999999999999986959899368758450787756999997652556----76788-876444555
Q ss_pred HHHHHH-CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------------CCCCCHHHHHHH
Q ss_conf 999850-7212897101655533357822133378899999862026963899725------------444414799997
Q gi|254780438|r 85 NLCERY-KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------------GNGNEHSLQAAK 151 (261)
Q Consensus 85 ~ia~~i-kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------------pd~~q~~i~~a~ 151 (261)
..+... .|...-++|-....+..-.+.......+.+..+++..++.|.+|...+. |+--...++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (298)
T 2cw6_A 87 EAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFY 166 (298)
T ss_dssp HHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEECHHH
T ss_conf 56640588679872220688999997250987666641014667651654220134420355567654303342000010
Q ss_pred HCCCCEEEECCCCCHHHHH--HHHHHHHHHHHHHHHH-HHH--HHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 4066146511211102444--3564336668899987-665--415623520789898779999973699638842
Q gi|254780438|r 152 LTGADCIELYTGPYGACYN--NPQQERIFLNKLAITA-QLA--QKMDLQINAGHDLTIQNIPNLINAIPYISEISV 222 (261)
Q Consensus 152 ~~Gad~VElhTG~Ya~a~~--~~~~~~~el~~i~~aa-~~A--~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsI 222 (261)
+.|+|+|-| ++.+. .+.+.. .+.... +.. ..++.-.|---||-.-|.-..+..=-.+-+.++
T Consensus 167 ~~g~~~i~i-----~Dt~G~~~P~~~~----~lv~~~~~~~~~~~i~~H~Hnd~Gla~An~laAi~aGa~~id~ti 233 (298)
T 2cw6_A 167 SMGCYEISL-----GDTIGVGTPGIMK----DMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSV 233 (298)
T ss_dssp HTTCSEEEE-----EETTSCCCHHHHH----HHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBT
T ss_pred HCCCCEECC-----CCCCCCCCHHHEE----HHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEECC
T ss_conf 148705536-----7641136200000----554521544688407997799987199999999971047895235
No 213
>>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} (A:)
Probab=29.00 E-value=41 Score=14.93 Aligned_cols=189 Identities=14% Similarity=0.051 Sum_probs=127.8
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHH-HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 078868998999999997499899982478833488899999-8874000136741588834856899999850721289
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPE-IRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
.++.+..+..+.+..+.++|++-|-+-.. +-...++.. +++. .+.....-=+--.++.++.+.+...+.+.
T Consensus 23 ~~~~~~~~~~~~~~~l~~aG~~~i~l~~~----~~~~~~~i~~i~~~----~~~~~~~~~~v~~~~~~~~~~~agad~v~ 94 (224)
T 1vhc_A 23 IALDNADDILPLADTLAKNGLSVAEITFR----SEAAADAIRLLRAN----RPDFLIAAGTVLTAEQVVLAKSSGADFVV 94 (224)
T ss_dssp ECCSSGGGHHHHHHHHHHTTCCEEEEETT----STTHHHHHHHHHHH----CTTCEEEEESCCSHHHHHHHHHHTCSEEE
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECC----CHHHHHHHHHHHHH----CCCCEEEEEECCCHHHHHHHHHHCCCEEE
T ss_conf 96899999999999999879998999678----82699999999982----89845876403657999999971687877
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+-.+.+ ......+..|+.++.=.. .+.+ +..+.+.|+|.|-++++.....
T Consensus 95 ~~~~~~-------------------~~~~~~~~~~~~~~~~~~-t~~e--~~~a~~~~~d~i~~~~~~~~~~-------- 144 (224)
T 1vhc_A 95 TPGLNP-------------------KIVKLCQDLNFPITPGVN-NPXA--IEIALEXGISAVKFFPAEASGG-------- 144 (224)
T ss_dssp CSSCCH-------------------HHHHHHHHTTCCEECEEC-SHHH--HHHHHHTTCCEEEETTTTTTTH--------
T ss_pred CCCCCH-------------------HHHHHHHHCCCCCCCCCC-CHHH--HHHHHHCCCCEEEECCCCCCCC--------
T ss_conf 898889-------------------999999856997168858-8999--9999983999699746433368--------
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6668899987665415623520789898779999973699638842599999-----9999409999999999997410
Q gi|254780438|r 177 IFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAA-----TALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIs-----eAl~~GL~~aI~~~~~ii~~~~ 250 (261)
+...........++.|-|.=|.+.+|+..++. -+.+=|=+|=+|.. ..+..-+++..++|++.+++.+
T Consensus 145 ----~~~~~~~~~~~~~~pi~a~GGI~~~~i~~~~~--aGAd~v~vgsai~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T 1vhc_A 145 ----VKXIKALLGPYAQLQIXPTGGIGLHNIRDYLA--IPNIVACGGSWFVEKKLIQSNNWDEIGRLVREVIDIIKEGG 217 (224)
T ss_dssp ----HHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHT--STTBCCEEECGGGCHHHHHTTCHHHHHHHHHHHHHHHTC--
T ss_pred ----HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH--CCCEEEEECHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf ----99999885603487288507989889999994--89989998814269777743899999999999999999854
No 214
>>1m1n_B Nitrogenase molybdenum-iron protein beta chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (B:33-63,B:339-522)
Probab=28.88 E-value=41 Score=14.91 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=67.0
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 50721289710165553335782213337889999986202--6963899725444414799997406614651121110
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHN--LGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~--~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
...-+.-|.||+. +......+.+.+..++. .|.|+.++-||+-.-...+...++|...+.+-|+.+.
T Consensus 23 ~~~~~~~~~ve~~-----------I~~e~~~~~~~l~~~~~~l~GKrv~I~gd~~~~~~la~fL~ElGm~vv~~~~~~~~ 91 (215)
T 1m1n_B 23 NFQREALTVIPAS-----------LTKERGRLVDMMTDSHTWLHGKRFALWGDPDFVMGLVKFLLELGCEPVHILCHNGN 91 (215)
T ss_dssp HHTCSSCEECCHH-----------HHHHHHHHHHHHHHHHHHHTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTCC
T ss_pred HHHCCCCCCHHHH-----------HHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 6630675554789-----------99999999999999999747987999888289999999999869973499945899
Q ss_pred HHHHHHHHHH------------HHHHHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 2444356433------------666889998766541562352078989
Q gi|254780438|r 167 ACYNNPQQER------------IFLNKLAITAQLAQKMDLQINAGHDLT 203 (261)
Q Consensus 167 ~a~~~~~~~~------------~el~~i~~aa~~A~~lgL~VnAGHgLn 203 (261)
..+.+..... ..-....+..+.....+-.+=-|+...
T Consensus 92 ~~~~e~~~~~l~~~~~~~~~~v~~~~d~~e~~~~i~~~~pDLiig~s~e 140 (215)
T 1m1n_B 92 KRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYG 140 (215)
T ss_dssp HHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHSCCSEEEECTTH
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCC
T ss_conf 7899999999852556878779968999999999862799999978853
No 215
>>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} (A:1-207)
Probab=28.73 E-value=41 Score=14.90 Aligned_cols=177 Identities=15% Similarity=0.070 Sum_probs=99.2
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC------CCCCEEEEEECCCHHHHHHHHHHCCC
Q ss_conf 886899899999999749989998247883348889999988740001------36741588834856899999850721
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQ------FPKAELNIEGYPNETFLNLCERYKPE 93 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~------~~~~elNiEg~p~~e~i~ia~~ikP~ 93 (261)
-.+.+++.++|..+.++|+++|.++-- .+...+....... .....+..-+....+.+........+
T Consensus 19 ~~~~~~~~e~a~~~~~~G~~~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (207)
T 1y0e_A 19 LHSSFIXSKXALAAYEGGAVGIRANTK--------EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCE 90 (207)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEESH--------HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEECCCH--------HHHHHHHHHCCCEEEEEEECCCCCCHHEECCHHHHHHHHHHCCCC
T ss_conf 778689999999999789969964998--------899999975264011144215577311123119999888866998
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCCCHHHHHHHHCCCCEEEE----CCCCCHHH
Q ss_conf 2897101655533357822133378899999862026-963899725444414799997406614651----12111024
Q gi|254780438|r 94 QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRISLFADGNGNEHSLQAAKLTGADCIEL----YTGPYGAC 168 (261)
Q Consensus 94 qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~-girvSLFIDpd~~q~~i~~a~~~Gad~VEl----hTG~Ya~a 168 (261)
-+.+........+. . ....+...+.. ...+..---.+++ ..+.+.+.|++.|-+ +||.....
T Consensus 91 ~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~~~--~a~~~~~~G~~~i~v~~~~~~~~~~~~ 157 (207)
T 1y0e_A 91 VIALDATLQQRPKE--------T---LDELVSYIRTHAPNVEIXADIATVE--EAKNAARLGFDYIGTTLHGYTSYTQGQ 157 (207)
T ss_dssp EEEEECSCSCCSSS--------C---HHHHHHHHHHHCTTSEEEEECSSHH--HHHHHHHTTCSEEECTTTTSSTTSTTC
T ss_pred EEEEECCCCCCCCC--------H---HHHHHHHHHHHCCCEEEECCCCCHH--HHHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf 99975455665102--------0---9999999987188346865889999--999999827993589605885446588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 4435643366688999876654156235207898-987799999736996388425999
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
...+ ..+....+.....++-|=|+=|. +.+.+..++. -+-+=|.+|-+|
T Consensus 158 ~~~~-------~~~~~i~~i~~~~~iPvia~GGI~~~~~~~~~~~--~GAd~V~vGsai 207 (207)
T 1y0e_A 158 LLYQ-------NDFQFLKDVLQSVDAKVIAEGNVITPDXYKRVXD--LGVHCSVVGGAI 207 (207)
T ss_dssp CTTH-------HHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHH--TTCSEEEECHHH
T ss_pred CCCH-------HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH--CCCCEEEECHHH
T ss_conf 7644-------2799999998436887898689899999999998--699999985132
No 216
>>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer; 1.60A {Thermus thermophilus} (A:1-394)
Probab=28.62 E-value=42 Score=14.88 Aligned_cols=24 Identities=21% Similarity=0.213 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 788999998620269638997254
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFIDp 140 (261)
.+.+..+++.++++||.+-+=+-|
T Consensus 50 ~~~~d~~i~~~~~~Gi~~iv~l~h 73 (394)
T 1kwg_A 50 WGWLDEAIATLAAEGLKVVLGTPT 73 (394)
T ss_dssp CHHHHHHHHHHHTTTCEEEEECST
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 899999999999779989980787
No 217
>>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str} (A:1-235)
Probab=28.02 E-value=43 Score=14.81 Aligned_cols=140 Identities=7% Similarity=-0.133 Sum_probs=75.3
Q ss_pred CEEEEEECCCHH----HHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---CCC
Q ss_conf 415888348568----9999985072128971016555333578221333788999998620269638997254---444
Q gi|254780438|r 71 AELNIEGYPNET----FLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG---NGN 143 (261)
Q Consensus 71 ~elNiEg~p~~e----~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp---d~~ 143 (261)
++||=.+..+.+ .++...+..=+-+.+ . -||--+|.+. .+.-..+++...+..+.+-.=+-. +-.
T Consensus 36 TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi~v-~-----G~tGE~~~Lt--~eEr~~~v~~~~~~~~pvi~gv~~~~t~~~ 107 (235)
T 2hmc_A 36 TPCRQDRTPDFDALVRKGKELIADGXSAVVY-C-----GSXGDWPLLT--DEQRXEGVERLVKAGIPVIVGTGAVNTASA 107 (235)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCCEEE-S-----SGGGTGGGSC--HHHHHHHHHHHHHTTCCEEEECCCSSHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-C-----EECCCCCCCC--HHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 8678987829999999999999779999997-8-----3375723089--999999999874157751004420137788
Q ss_pred CHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE-----ECCCCCHHHHHHHHHHCCCCE
Q ss_conf 147999974066146511211102444356433666889998766541562352-----078989877999997369963
Q gi|254780438|r 144 EHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQIN-----AGHDLTIQNIPNLINAIPYIS 218 (261)
Q Consensus 144 q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~Vn-----AGHgLn~~Nl~~~i~~Ip~I~ 218 (261)
.+..+.|++.|+|.+-+..-+|-..... + .-++.++..++....+.+-+. .|=+|..+.+.. ++.+|.|.
T Consensus 108 i~~a~~A~~~Gadavlv~~P~~~~~~~~---~-~i~~~~~~ia~~~~~~pi~iyn~P~~~g~~~~~~~l~~-La~~pnvv 182 (235)
T 2hmc_A 108 VAHAVHAQKVGAKGLXVIPRVLSRGSVI---A-AQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFAL-RAEHKNLV 182 (235)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSTTCH---H-HHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHH-HHHCTTEE
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCC---H-HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHH-HCCCCHHE
T ss_conf 8888789982885022200112333541---5-68999986631587744888703446454442134433-01310112
Q ss_pred EEEEH
Q ss_conf 88425
Q gi|254780438|r 219 EISVG 223 (261)
Q Consensus 219 EvsIG 223 (261)
=+-..
T Consensus 183 giK~~ 187 (235)
T 2hmc_A 183 GFKEF 187 (235)
T ss_dssp EEEEC
T ss_pred EEECC
T ss_conf 33116
No 218
>>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} (A:1-279)
Probab=27.63 E-value=43 Score=14.77 Aligned_cols=26 Identities=8% Similarity=0.057 Sum_probs=19.7
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 98999824788334888999998874
Q gi|254780438|r 38 ASGLTVHPRPDQRHIRYTDLPEIRRL 63 (261)
Q Consensus 38 adgITvH~R~DrRHI~~~Dv~~l~~~ 63 (261)
.-|.-.|+-.+-+.-..+|+..++++
T Consensus 24 ~~G~n~h~~~~~~~~~~~di~~mk~~ 49 (279)
T 3d3a_A 24 VKAAEIHYPRIPKEYWEHRIKXCKAL 49 (279)
T ss_dssp CEEEEECGGGSCGGGHHHHHHHHHHH
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 98870578879989999999999982
No 219
>>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} (B:32-62,B:311-519)
Probab=27.43 E-value=43 Score=14.74 Aligned_cols=134 Identities=10% Similarity=0.004 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH-HH-----------H
Q ss_conf 3337889999986202--69638997254444147999974066146511211102444356433-66-----------6
Q gi|254780438|r 114 LQNQALLTKTVARLHN--LGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER-IF-----------L 179 (261)
Q Consensus 114 ~~~~~~L~~~i~~l~~--~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~-~e-----------l 179 (261)
......+.+.+..++. .|.|+.++-||+..-.......++|.+.+-+-|..+...+.+..... .+ -
T Consensus 62 ~~e~~~~~~~l~~~~~~L~Gkrv~I~g~~~~~~~l~~~L~ElGm~vv~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~ 141 (240)
T 1qgu_B 62 TLERGRLVDMMLDSHTWLHGKKFGLYGDPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFIN 141 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEES
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 99999999999999986079779998982889999999998799556986379987899999999874767888779968
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH--HCCCCEEEEEHH-----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 889998766541562352078989877999997--369963884259-----99999999409999999999997
Q gi|254780438|r 180 NKLAITAQLAQKMDLQINAGHDLTIQNIPNLIN--AIPYISEISVGH-----AFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 180 ~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~--~Ip~I~EvsIGH-----aiIseAl~~GL~~aI~~~~~ii~ 247 (261)
....+..+....++-.+--|+............ .--.|--+.||. .....+-+.|+.-++.=..++++
T Consensus 142 ~d~~e~~~~i~~~~pDLiigss~e~~~a~~~~~~~~~~~iP~i~~~fP~~d~~~~~~~p~~Gy~Ga~~l~~~i~n 216 (240)
T 1qgu_B 142 CDLWHFRSLMFTRQPDFMIGNSYGKFIQRDTLAKGKAFEVPLIRLGFPLFDRHHLHRQTTWGYEGAMNIVTTLVN 216 (240)
T ss_dssp CCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCGGGCCCEEECSSCCCSSSSGGGCCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999862699999978620555465543334239987983287678635666766307889999999999
No 220
>>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica} (A:)
Probab=27.25 E-value=44 Score=14.72 Aligned_cols=43 Identities=14% Similarity=0.013 Sum_probs=25.7
Q ss_pred HHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 9998620269638997-2544441479999740661465112111
Q gi|254780438|r 122 KTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 122 ~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
-+-..|+..|.+|... .+..++ .-++.+++.++|.|=+=+-..
T Consensus 107 ~~~~~l~~~G~~v~~LG~~~p~~-~l~~~~~~~~~~~v~iS~~~~ 150 (210)
T 1y80_A 107 LVAMMLESGGFTVYNLGVDIEPG-KFVEAVKKYQPDIVGMSALLT 150 (210)
T ss_dssp HHHHHHHHTTCEEEECCSSBCHH-HHHHHHHHHCCSEEEEECCSG
T ss_pred HHHHHHHHCCCCEECCCCCCCHH-HHHHHHHHCCCCEEEEEEECC
T ss_conf 99999998799715167778989-999999850999888873136
No 221
>>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} (A:1-19,A:104-267)
Probab=27.23 E-value=44 Score=14.72 Aligned_cols=100 Identities=9% Similarity=0.062 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 33378899999862026963899725444414799997406614651121110244435643366688999876654156
Q gi|254780438|r 114 LQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMD 193 (261)
Q Consensus 114 ~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg 193 (261)
..+........+++....-.-.+||.-... .+.+|++.|...|=+.+|.-.............+..+.+........-
T Consensus 76 kp~p~~~~~~~~~~~~~~~~~~i~VGD~~~--Di~aA~~aG~~~I~v~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 153 (183)
T 1swv_A 76 RPYPWMCYKNAMELGVYPMNHMIKVGDTVS--DMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRF 153 (183)
T ss_dssp TTSSHHHHHHHHHHTCCSGGGEEEEESSHH--HHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCCCEEEECCCHH--HHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 468077899999958874124279806533--289999879939997668877787989883078999999998999998
Q ss_pred CEEEECCCCC-HHHHHHHHHHCC
Q ss_conf 2352078989-877999997369
Q gi|254780438|r 194 LQINAGHDLT-IQNIPNLINAIP 215 (261)
Q Consensus 194 L~VnAGHgLn-~~Nl~~~i~~Ip 215 (261)
....|.+=++ +..|.++++.+.
T Consensus 154 ~~~~~d~vi~~~~eL~~il~~~~ 176 (183)
T 1swv_A 154 VENGAHFTIETMQELESVMEHIE 176 (183)
T ss_dssp HHTTCSEEESSGGGHHHHHHHHT
T ss_pred HHCCCCEEECCHHHHHHHHHHHH
T ss_conf 74799899889999999999997
No 222
>>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} (A:93-172)
Probab=26.99 E-value=44 Score=14.69 Aligned_cols=44 Identities=16% Similarity=0.313 Sum_probs=34.7
Q ss_pred HCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 202696389972544441479999740661465112111024443
Q gi|254780438|r 127 LHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNN 171 (261)
Q Consensus 127 l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~ 171 (261)
-+..|+++-+|+..+.++.-++..+..|++. .++-|.|.++...
T Consensus 20 a~~~Gi~~~i~~p~~~~~~k~~~l~~~GA~V-~~~~~~~~~~~~~ 63 (80)
T 1p5j_A 20 ARQLGVPATIVVPGTTPALTIERLKNEGATC-KVVGELLDEAFEL 63 (80)
T ss_dssp HHHHTCCEEEEECTTCCHHHHHHHHHTTCEE-EECCSCHHHHHHH
T ss_pred HHHCCCCCEEECCCCCCHHHEECCCCCCEEE-EEECCCCCHHHHH
T ss_conf 9985998342026888445311234574289-9831221046778
No 223
>>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis H37RV} PDB: 3fgp_A* 3dki_A* 3dwi_A* (A:71-151)
Probab=26.50 E-value=45 Score=14.63 Aligned_cols=44 Identities=20% Similarity=0.097 Sum_probs=34.7
Q ss_pred HHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC-CCCHHHH
Q ss_conf 6202696389972544441479999740661465112-1110244
Q gi|254780438|r 126 RLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYT-GPYGACY 169 (261)
Q Consensus 126 ~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT-G~Ya~a~ 169 (261)
-.+..|+++-+|+.++.++.-++..+..|++.+..-. +.|.+++
T Consensus 21 ~a~~~G~~~~i~~p~~~~~~k~~~l~~~Ga~V~~v~~~~~~~~~~ 65 (81)
T 3dwg_A 21 AARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAEGGSNTAV 65 (81)
T ss_dssp HHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECSTTTHHHHH
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCHH
T ss_conf 999818874012334367999986532355123026321232034
No 224
>>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycoprotein; HET: NAG BMA MAN; 1.90A {Penicillium SP} (A:1-356)
Probab=26.32 E-value=36 Score=15.33 Aligned_cols=13 Identities=8% Similarity=0.038 Sum_probs=5.2
Q ss_pred HHHHHCCCCEEEE
Q ss_conf 9999749989998
Q gi|254780438|r 31 KIALQSGASGLTV 43 (261)
Q Consensus 31 ~~~~~~GadgITv 43 (261)
..+.++|+.-|-+
T Consensus 43 ~~~k~~G~N~iR~ 55 (356)
T 1tg7_A 43 EKVKALGFNCVSF 55 (356)
T ss_dssp HHHHTTTCCEEEE
T ss_pred HHHHHHCCCEEEE
T ss_conf 9999719978998
No 225
>>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A (A:1-258)
Probab=25.94 E-value=46 Score=14.57 Aligned_cols=108 Identities=10% Similarity=0.103 Sum_probs=50.8
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCC--CCHHHHHHHHHHHCCCCCCCEEEEEECCC-------------HHHHHHHHHHCC
Q ss_conf 999999974998999824788334--88899999887400013674158883485-------------689999985072
Q gi|254780438|r 28 HIGKIALQSGASGLTVHPRPDQRH--IRYTDLPEIRRLIDEQFPKAELNIEGYPN-------------ETFLNLCERYKP 92 (261)
Q Consensus 28 ~~a~~~~~~GadgITvH~R~DrRH--I~~~Dv~~l~~~~~~~~~~~elNiEg~p~-------------~e~i~ia~~ikP 92 (261)
.-...+.++|+..|-++.-.+-.- =.-.++..+-..+.++ .+..-++.... ..+..++...+.
T Consensus 35 ~~~~~~k~~G~N~iR~~~~~~~~~~~~~~~~l~~~~~~a~~~--Gi~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (258)
T 2whl_A 35 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDTIREVIELAEQN--KMVAVVEVHDATGRDSRSDLNRAVDYWIEMKDALIG 112 (258)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTT--TCEEEEEECTTTTCCCHHHHHHHHHHHHHTHHHHTT
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999999976999899853488855844899999999999987--999998301023566410199999999999998559
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 12897101655533357822133378899999862026963899725
Q gi|254780438|r 93 EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD 139 (261)
Q Consensus 93 ~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID 139 (261)
+---+.-+--+|....-.++ ............+++..-..-+++.
T Consensus 113 ~p~v~~~~~~NE~~~~~~~~--~~~~~~~~~~~~~r~~~~~~~v~~~ 157 (258)
T 2whl_A 113 KEDTVIINIANEWYGSWDGS--AWADGYIDVIPKLRDAGLTHTLMVD 157 (258)
T ss_dssp CTTTEEEECCTTCCCSSCHH--HHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCEEEEEEECCCCCCCCHH--HHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 99668986311235788734--6789999999999864887479996
No 226
>>1s9r_A Arginine deiminase; hydrolase, 5-fold pseudo-symmetric domain, 5- helix bundle domain, raction intermediate; HET: ARG; 1.60A {Mycoplasma arginini} (A:1-74,A:392-410)
Probab=25.87 E-value=46 Score=14.56 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=35.0
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 7101655533357822133378899999862026963899725
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD 139 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID 139 (261)
|.|+..+++.=|.=+++..-...=..+++.|+++|++|-.++.
T Consensus 34 l~P~~~~~lLfddi~~~~~A~~EHd~fv~~Lr~~GVeV~~L~~ 76 (93)
T 1s9r_A 34 ITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELMG 76 (93)
T ss_dssp GCCGGGHHHHTCSSCCCHHHHHHHHHHHHHHHHTTTCEEEETS
T ss_pred HCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 4592115664367677999999999999999997899999889
No 227
>>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482} (A:)
Probab=25.64 E-value=47 Score=14.53 Aligned_cols=186 Identities=10% Similarity=-0.075 Sum_probs=106.7
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH-HHHHHCCCEEE
Q ss_conf 07886899899999999749989998247883348889999988740001367415888348568999-99850721289
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLN-LCERYKPEQIT 96 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~-ia~~ikP~qvt 96 (261)
++....++.++.+..+++.|++.|-+-.... .. .+++. +....++..++
T Consensus 7 t~~~~~~d~~~~v~~l~~~G~~~i~i~~~~~----~~--------------------------~~~~~~~~~~~~~~~~~ 56 (210)
T 3ceu_A 7 TTPTFFVEEDKIITALFEEGLDILHLRKPET----PA--------------------------XYSERLLTLIPEKYHRR 56 (210)
T ss_dssp CCSSCCTTHHHHHHHHHHTTCCEEEECCSSC----CH--------------------------HHHHHHHHHSCGGGGGG
T ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCC----CH--------------------------HHHHHHHHHHHHHHCCE
T ss_conf 3985365899999999987998899805999----99--------------------------99999999989985998
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+.....-++..+.|-+...-.. .....++..+.++..-+-+.. .-.+.+.|+|.|-+.+--+.........
T Consensus 57 ~~~~~~~~~~~~aga~~i~~~~---~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~d~v~~~~v~~t~~~~~~~~-- 127 (210)
T 3ceu_A 57 IVTHEHFYLKEEFNLXGIHLNA---RNPSEPHDYAGHVSCSCHSVE----EVKNRKHFYDYVFXSPIYDSISKVNYYS-- 127 (210)
T ss_dssp EEESSCTTHHHHTTCSEEECCS---SSCSCCTTCCSEEEEEECSHH----HHHTTGGGSSEEEECCCC---------C--
T ss_pred EEEECCHHHHHHCCCCEECCCH---HHHHHHCCCCCEEEEECCCHH----HHHHHHHCCCEEEECCCCCCCCCCCCCC--
T ss_conf 9995969999984998136662---246530068988999459999----9998870999899757755787754444--
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66688999876654156235207898987799999736996388425999999999409999999999997
Q gi|254780438|r 177 IFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~ 247 (261)
............+...++.|-|.=|.|.+|+..+++ -+.+=|-+|=+|....- ..++++.++++.+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~i~a~GGI~~~ni~~~~~--aGa~~v~vgs~i~~~~d---~~~~~~~~~~~~~ 193 (210)
T 3ceu_A 128 TYTAEELREAQKAKIIDSKVXALGGINEDNLLEIKD--FGFGGAVVLGDLWNKFD---ACLDQNYLAVIEH 193 (210)
T ss_dssp CCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHH--TTCSEEEESHHHHTTCC---TTTSSCCHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH--CCCCEEEEEHHHHCCCC---HHHHHHHHHHHHH
T ss_conf 579899999998625799779735889999999998--39988998699976998---6899879999999
No 228
>>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics, PSI; 2.50A {Agrobacterium tumefaciens str} (A:)
Probab=25.62 E-value=47 Score=14.53 Aligned_cols=138 Identities=18% Similarity=0.089 Sum_probs=73.3
Q ss_pred CCCC-CHHHHHHHHHHCCCCEEE--EECCCCCCCC-----------------CHHHHHHHHHHH----------------
Q ss_conf 8689-989999999974998999--8247883348-----------------889999988740----------------
Q gi|254780438|r 21 LPWP-NLVHIGKIALQSGASGLT--VHPRPDQRHI-----------------RYTDLPEIRRLI---------------- 64 (261)
Q Consensus 21 ~~~P-~~~~~a~~~~~~GadgIT--vH~R~DrRHI-----------------~~~Dv~~l~~~~---------------- 64 (261)
+++| |=+.+-..|.+.||++|= ||+-.|-.-+ .+-....|+++-
T Consensus 12 ~~~pENT~~a~~~A~~~Ga~~iE~DV~~TkDg~~vv~HD~~l~r~t~~~~~~~~~t~~el~~~~~~~~~~~~~~~~~~~~ 91 (248)
T 1zcc_A 12 RFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGTGPVGHMLSSEIDTLDAGGWFDDRFKGAIVPR 91 (248)
T ss_dssp TTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCCSBSTTSCHHHHTTSCSSTTTCGGGTTCCCCB
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99972289999999984989899988991599889823410122234465677705999986440676652123466884
Q ss_pred -----CCCCCCCEEEEEECCC------------------------HHHHHHHHHHCCCEEEEE-----ECCCCCCCCCCC
Q ss_conf -----0013674158883485------------------------689999985072128971-----016555333578
Q gi|254780438|r 65 -----DEQFPKAELNIEGYPN------------------------ETFLNLCERYKPEQITLV-----PDDPHQLTSDHG 110 (261)
Q Consensus 65 -----~~~~~~~elNiEg~p~------------------------~e~i~ia~~ikP~qvtLV-----Pe~r~elTTegG 110 (261)
....+...+|+|.... .+++..+.+..|..-+.. +..........|
T Consensus 92 l~~~l~~~~~~~~~~~e~k~~~~~~~~~~~~~~~~~~~v~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (248)
T 1zcc_A 92 LDAYLEHLRGRAGVYIELKYCDPAKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHA 171 (248)
T ss_dssp HHHHHHHHTTTCEEEEEEEESCHHHHHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSSTHHHHHTTCC
T ss_pred HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC
T ss_conf 99999865124440356447861156789999876413456779889999999973036720342234672566777406
Q ss_pred CCHHH-H-HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEE
Q ss_conf 22133-3-7889999986202696389972544441479999740661465
Q gi|254780438|r 111 WDFLQ-N-QALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIE 159 (261)
Q Consensus 111 ldv~~-~-~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VE 159 (261)
.+... + ...-...++.+++.|++|-.+-=.++.+ .++.+..+|+|.|-
T Consensus 172 ~~~~~~~~~~~~~~~v~~~~~~g~~v~~wtv~~~~~-~~~~l~~~Gvdgi~ 221 (248)
T 1zcc_A 172 SIIEITPAQMRRPGIIEASRKAGLEIMVYYGGDDMA-VHREIATSDVDYIN 221 (248)
T ss_dssp SEEEECHHHHHSHHHHHHHHHHTCEEEEECCCCCHH-HHHHHHHSSCSEEE
T ss_pred CEEECCHHHHCCHHHHHHHHHCCCEEEEECCCCHHH-HHHHHHHCCCCEEE
T ss_conf 453045354179999999998799999973699999-99999976999999
No 229
>>3g8r_A Probable spore coat polysaccharide biosynthesis protein E; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472} (A:1-264)
Probab=25.44 E-value=47 Score=14.50 Aligned_cols=47 Identities=15% Similarity=0.151 Sum_probs=20.8
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 88999998620269638997254444147999974066146511211102
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
+.+....+..++.|+.+.-=+. |+ .+++.+.++|+|.+-+-.+.--+
T Consensus 78 ~~~~~L~~~~~~~Gl~~~~~~~-~~--~~~~~l~~~~v~~~kIgS~~~~n 124 (264)
T 3g8r_A 78 EQXQKLVAEXKANGFKAICTPF-DE--ESVDLIEAHGIEIIKIASCSFTD 124 (264)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEC-SH--HHHHHHHHTTCCEEEECSSSTTC
T ss_pred HHHHHHHHHHCCCCEEECCCCC-CC--HHHEECCCCCCHHHHHHHHHHHH
T ss_conf 7767776542022200023422-12--22200123340122120133567
No 230
>>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, L-threonine metabolism, alternate conformation lyase; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A* (A:86-166)
Probab=25.30 E-value=47 Score=14.49 Aligned_cols=45 Identities=11% Similarity=0.054 Sum_probs=35.3
Q ss_pred HHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 6202696389972544441479999740661465112111024443
Q gi|254780438|r 126 RLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNN 171 (261)
Q Consensus 126 ~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~ 171 (261)
-.+..|+++-+|+.++.++.-++.....|++ |+++.|.|.++...
T Consensus 21 ~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~-V~~~~~~~~~~~~~ 65 (81)
T 2gn0_A 21 SCAMLGIDGKVVMPKGAPKSKVAATCDYSAE-VVLHGDNFNDTIAK 65 (81)
T ss_dssp HHHHHTCCEEEEECTTSCHHHHHHHHHHSCE-EEECCSSHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHCCCCCE-EEEECCCCHHHHHH
T ss_conf 9987245511036533678899754045412-43201220010378
No 231
>>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B} (A:)
Probab=25.28 E-value=47 Score=14.49 Aligned_cols=122 Identities=7% Similarity=0.042 Sum_probs=60.9
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC-------CHHHHHHHHHHCCC
Q ss_conf 86899899999999749989998247883348889999988740001367415888348-------56899999850721
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP-------NETFLNLCERYKPE 93 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-------~~e~i~ia~~ikP~ 93 (261)
.+..+-++.|+.+.++|||++-+.|..--+.-++.=+.-.+.++.. .++++=+--+| +++++.-..+ .|.
T Consensus 86 ~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~~~~~i~~~~~~i~~a--~~~pi~iYn~P~~~g~~l~~~~~~~l~~-~~~ 162 (297)
T 3flu_A 86 NNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEA--TSIPMIIYNVPGRTVVSMTNDTILRLAE-IPN 162 (297)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH--CCSCEEEEECHHHHSSCCCHHHHHHHTT-STT
T ss_pred CCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC--CCCCEEEEECCCCCCCCCCHHHHHHHHC-CCC
T ss_conf 3299999999999980988547337878898999999999999855--7998899978864477899999999865-899
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCC
Q ss_conf 28971016555333578221333788999998620269638997254444147999974066146511211
Q gi|254780438|r 94 QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 94 qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~ 164 (261)
.+.+ - +.+.|+ ..+..-.+..+-+.++|--.|. .+-.....|++..=-=++.
T Consensus 163 vvgi-K--------~s~~~~-------~~~~~~~~~~~~~~~v~~g~d~---~~~~~~~~G~~G~~~~~~n 214 (297)
T 3flu_A 163 IVGV-K--------EASGNI-------GSNIELINRAPEGFVVLSGDDH---TALPFMLCGGHGVITVAAN 214 (297)
T ss_dssp EEEE-E--------ECSCCH-------HHHHHHHHHSCTTCEEEECCGG---GHHHHHHTTCCEEEESGGG
T ss_pred EEEE-E--------CCCCCH-------HHHHHHHHHCCCCEEEECCCHH---HHHHHHHCCCCEEEECCCC
T ss_conf 7888-6--------288874-------8899999977998699438513---2114664499557612101
No 232
>>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, X-RAY analysis, stability, calorimetry lyase; 2.00A {Pyrococcus furiosus} (A:)
Probab=25.01 E-value=48 Score=14.45 Aligned_cols=129 Identities=11% Similarity=0.047 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 33788999998620269638997254444147999974066146511211102444356433666889998766541562
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDL 194 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL 194 (261)
...+.+..+++..+..+.+.++.+.+..+....+.+.+.|+|.|-+.+.+..-.- .......+.++. ...+....+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~d~i~~~~~~~~~~~--~~~~~~~~~~~i--~~~~~~~~i 192 (248)
T 1geq_A 117 LPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGA--REEIPKTAYDLL--RRAKRICRN 192 (248)
T ss_dssp CCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC---------CCCHHHHHHH--HHHHHHCSS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCC--CCCCCHHHHHHH--HHHHHCCCC
T ss_conf 9867877888777652965447538888789999997448863998426677787--643204678999--999852589
Q ss_pred EEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 35207898-987799999736996388425999999999409999999999997410
Q gi|254780438|r 195 QINAGHDL-TIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 195 ~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
.|=|+=|. +-+.+..+++ . +-+=|.+|-++.. +...+.++.++++++.+++.+
T Consensus 193 pii~~GGI~~~~dv~~al~-~-GAd~V~vGt~~~~-~~~~~~~~~~~~~~~~~~e~r 246 (248)
T 1geq_A 193 KVAVGFGVSKREHVVSLLK-E-GANGVVVGSALVK-IIGEKGREATEFLKKKVEELL 246 (248)
T ss_dssp CEEEESCCCSHHHHHHHHH-T-TCSEEEECHHHHH-HHHHHGGGCHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHH-C-CCCEEEECHHHHH-HHHHCCHHHHHHHHHHHHHHH
T ss_conf 7388815499999999986-4-8999998889999-999707217899999999985
No 233
>>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} (A:)
Probab=24.84 E-value=48 Score=14.43 Aligned_cols=24 Identities=4% Similarity=-0.061 Sum_probs=9.8
Q ss_pred HHHHHHHHHHCCCC--CEEEEEECCC
Q ss_conf 88999998620269--6389972544
Q gi|254780438|r 118 ALLTKTVARLHNLG--SRISLFADGN 141 (261)
Q Consensus 118 ~~L~~~i~~l~~~g--irvSLFIDpd 141 (261)
..++.++.++++.. +-.+++=+|.
T Consensus 151 ~~~~~~~~~~~~~p~i~~~~~~NE~~ 176 (343)
T 3civ_A 151 SDMMAHYAHVAKRTGCEMFCVGCEMT 176 (343)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESCT
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 99999999871568803999467866
No 234
>>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* (A:)
Probab=24.71 E-value=49 Score=14.41 Aligned_cols=106 Identities=7% Similarity=-0.072 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCC---CCCCCHHHHHHHHHHHCCC-CCCCEEEEEECCC------------HHHHHHHH
Q ss_conf 989999999974998999824788---3348889999988740001-3674158883485------------68999998
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPD---QRHIRYTDLPEIRRLIDEQ-FPKAELNIEGYPN------------ETFLNLCE 88 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~D---rRHI~~~Dv~~l~~~~~~~-~~~~elNiEg~p~------------~e~i~ia~ 88 (261)
...+-...+..+|++-|-+|.-.+ -.+.....+..+..++... -..+...+.+... ..+.....
T Consensus 44 ~~~~~l~~~k~~G~N~iRi~~~~~~~~~~~~d~~g~~~ld~~~~~a~~~Gl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGDPHYNLDRAKTFFAEIA 123 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSCCGGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 89999999997399789983054656776584789999999999999869946632332466555544999999999999
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 507212897101655533357822133378899999862026
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL 130 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~ 130 (261)
...=+.--++-+--+|-......+.......+...++..-..
T Consensus 124 ~~~~~~~~i~~~~~NE~~~~~~~~~~~~~~~~~~~ir~~dp~ 165 (306)
T 2cks_A 124 QRHASKTNVLYEIANEPNGVSWASIKSYAEEVIPVIRQRDPD 165 (306)
T ss_dssp HHHTTCSSEEEECCSCCCSSCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 984789742001225655676677899999999999974888
No 235
>>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} (A:43-148)
Probab=24.70 E-value=49 Score=14.41 Aligned_cols=47 Identities=4% Similarity=-0.087 Sum_probs=36.2
Q ss_pred HHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC-CCCHHHH
Q ss_conf 9986202696389972544441479999740661465112-1110244
Q gi|254780438|r 123 TVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYT-GPYGACY 169 (261)
Q Consensus 123 ~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT-G~Ya~a~ 169 (261)
+-.-.+..|+++-+|+..+.++.-++..+..|++.+..-. |.|..+.
T Consensus 40 lA~~a~~~g~~~~iv~p~~~~~~k~~~l~~~Ga~V~~v~~~~~~~~~~ 87 (106)
T 1z7w_A 40 LAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAI 87 (106)
T ss_dssp HHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCH
T ss_conf 999998626845996400230455433213786079850344433210
No 236
>>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.71A {Bacillus subtilis subsp} (A:)
Probab=24.48 E-value=49 Score=14.39 Aligned_cols=197 Identities=10% Similarity=-0.036 Sum_probs=120.1
Q ss_pred HHHHH---CCCC--CCCCHHHHHHHHHHCCCCEEEE-E---CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHH
Q ss_conf 22322---0788--6899899999999749989998-2---478833488899999887400013674158883485689
Q gi|254780438|r 13 AVLRN---RRNL--PWPNLVHIGKIALQSGASGLTV-H---PRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETF 83 (261)
Q Consensus 13 AtLRn---aRg~--~~P~~~~~a~~~~~~GadgITv-H---~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~ 83 (261)
.|||. +.|. ...+.+..+....++|.+-|-+ + +..+.+-.+........... ..--+.=......-
T Consensus 12 ~TlRDG~Q~~~~~~~~~~~~~i~~~l~~~Gv~~iEvg~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 86 (307)
T 1ydo_A 12 VGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-----KGVTYAALVPNQRG 86 (307)
T ss_dssp CHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-----TTCEEEEECCSHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCC-----CCCEEEHHHCCCHH
T ss_conf 9988636598999899999999999998198989947875845277778899999747745-----45321001102327
Q ss_pred HHHHHHHCCCEEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------------CCCCCHHHHHH
Q ss_conf 99998507212897-101655533357822133378899999862026963899725------------44441479999
Q gi|254780438|r 84 LNLCERYKPEQITL-VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------------GNGNEHSLQAA 150 (261)
Q Consensus 84 i~ia~~ikP~qvtL-VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------------pd~~q~~i~~a 150 (261)
++.+....++.+.+ +|-....+++--+++...+.+.+.+.++..++.|.++...+. ++.-...++.+
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~G~~v~~~l~~~~~~~d~~~~~~~~l~~~~~~~ 166 (307)
T 1ydo_A 87 LENALEGGINEACVFXSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEAL 166 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99863044435888730126554543105489877667777765403210001233220466523221067889999999
Q ss_pred HHCCCCEEEEC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHC--CCEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 74066146511-2111024443564336668899987665-415--623520789898779999973699638842
Q gi|254780438|r 151 KLTGADCIELY-TGPYGACYNNPQQERIFLNKLAITAQLA-QKM--DLQINAGHDLTIQNIPNLINAIPYISEISV 222 (261)
Q Consensus 151 ~~~Gad~VElh-TG~Ya~a~~~~~~~~~el~~i~~aa~~A-~~l--gL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsI 222 (261)
.+.|+|+|-|- |.-.+ .+.+. .++....... ... |+-.|-.=||-+-|.-..+.+=-.+-+.++
T Consensus 167 ~~~g~~~i~l~Dt~G~~----~P~~v----~~li~~l~~~~p~~~i~~H~Hn~~Gla~An~laAi~aGa~~id~s~ 234 (307)
T 1ydo_A 167 FEFGISELSLGDTIGAA----NPAQV----ETVLEALLARFPANQIALHFHDTRGTALANXVTALQXGITVFDGSA 234 (307)
T ss_dssp HHHTCSCEEEECSSCCC----CHHHH----HHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBG
T ss_pred HHCCCEEEECCCCCCCC----CCHHH----HHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCEECCCCC
T ss_conf 86398078514655678----80787----8889877630786322143067864099999847540751525566
No 237
>>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} (A:)
Probab=24.37 E-value=49 Score=14.37 Aligned_cols=187 Identities=12% Similarity=0.118 Sum_probs=125.4
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH-HHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 89999999974998999824788334888999998-87400013674158883485689999985072128971016555
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEI-RRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l-~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~e 104 (261)
+..+..-|++.++..|--.-..-..|...+-+... +.......-.+=+++-=..+.+.+.-+.+.-=+.|-+=
T Consensus 31 ~~avi~AAe~~~sPvIi~~~~~~~~~~~~~~~~~~~~~~A~~a~VPValHlDH~~~~e~i~~ai~~GftSVMiD------ 104 (286)
T 1gvf_A 31 IQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMID------ 104 (286)
T ss_dssp HHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCEEEEC------
T ss_pred HHHHHHHHHHHCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCEEEEE------
T ss_conf 99999999996999899987506655799999999999998659967987146888999999855799758874------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE------------------CCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 3335782213337889999986202696389972------------------5444414799997406614651121110
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA------------------DGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFI------------------Dpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
---+++..|-..-+++++..+..|+-|.-=+ -.||++ ..+...++|+|++=+-.|.-=
T Consensus 105 ---gS~lp~eeNi~~T~evv~~ah~~gv~VEaElG~i~g~e~~~~~~~~~~~~T~pe~-a~~Fv~~TgvD~LAvaiGt~H 180 (286)
T 1gvf_A 105 ---GSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQE-AKRFVELTGVDSLAVAIGTAH 180 (286)
T ss_dssp ---CTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHH-HHHHHHHHCCSEEEECSSCCS
T ss_pred ---CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHH-HHHHHHHCCCCEEEEECCCCC
T ss_conf ---8978999999999999998574231487864566766787654420220268899-999998329871310005534
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHH
Q ss_conf 2444356433666889998766541562352078989877999997369963884259999
Q gi|254780438|r 167 ACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFA 227 (261)
Q Consensus 167 ~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiI 227 (261)
-.|....+. -++.+++. ..+...-|-.|-|.|+.-+.+..+++ -+|..+||+-.+-
T Consensus 181 G~y~~~p~l--~~~~L~~I-~~~~~~pLVlHGgSG~~~e~~~~ai~--~Gi~KiNi~T~~~ 236 (286)
T 1gvf_A 181 GLYSKTPKI--DFQRLAEI-REVVDVPLVLHGASDVPDEFVRRTIE--LGVTKVNVATELK 236 (286)
T ss_dssp SCCSSCCCC--CHHHHHHH-HHHCCSCEEECCCTTCCHHHHHHHHH--TTEEEEEECHHHH
T ss_pred CCCCCCCCC--CHHHHHHH-HCCCCCCEEEECCCCCCHHHHHHHHH--CCEEEEEECHHHH
T ss_conf 567888763--28899975-30469866874789998899999987--2927998572999
No 238
>>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} (A:)
Probab=24.21 E-value=50 Score=14.35 Aligned_cols=167 Identities=13% Similarity=0.062 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCC---CCCC--CCHHHHHHHHHHHCCCCCCCEEEEEE---------------CC---
Q ss_conf 8998999999997499899982478---8334--88899999887400013674158883---------------48---
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRP---DQRH--IRYTDLPEIRRLIDEQFPKAELNIEG---------------YP--- 79 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~---DrRH--I~~~Dv~~l~~~~~~~~~~~elNiEg---------------~p--- 79 (261)
.-++.++...+.++|.+||-+|+.. ...+ ..+.++..+++.+... ++++-.=. .|
T Consensus 32 ~~~l~~~l~~~~~~G~~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~ 109 (393)
T 1xim_A 32 ALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET--GLIVPMVTTNLFTHPVFKDGGFTSNDRS 109 (393)
T ss_dssp CCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH--TCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred CCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCCEEEECCCCCCHHHHCCCCCCCCHH
T ss_conf 55899999999983998683366767899998788999999999999864--9801043044321255514887893999
Q ss_pred --------CHHHHHHHHHHCCCEEEEEECCCCCCCCC-----CCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC---
Q ss_conf --------56899999850721289710165553335-----78221333788999998620269638997254444---
Q gi|254780438|r 80 --------NETFLNLCERYKPEQITLVPDDPHQLTSD-----HGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN--- 143 (261)
Q Consensus 80 --------~~e~i~ia~~ikP~qvtLVPe~r~elTTe-----gGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~--- 143 (261)
..+.++++.......+.+.|-....-+.. ..|+. -.+.+..+....++.|+.+.+-+.|.+.
T Consensus 110 ~r~~~~~~~~~~i~~a~~LG~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~a~~~g~~~~~e~~~~~~~~~ 187 (393)
T 1xim_A 110 VRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDR--YREALNLLAQYSEDRGYGLRFAIEPKPNEPR 187 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHH--HHHHHHHHHHHHHHHTCCCEEEEECCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 99999999999999999958981697078776668765689999999--9999999999998618881699722688886
Q ss_pred --------CHHHHHHHH-CCCC--EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf --------147999974-0661--4651121110244435643366688999876654156235207
Q gi|254780438|r 144 --------EHSLQAAKL-TGAD--CIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAG 199 (261)
Q Consensus 144 --------q~~i~~a~~-~Gad--~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAG 199 (261)
...+....+ .+.+ .+-+=||.+..+ ..... ..+.....+.....+..|-+
T Consensus 188 ~~~~~~~~~~~~~~i~~~~~~~~~gv~lD~~H~~~~---g~d~~---~~l~~~~~~~~~~hi~d~~~ 248 (393)
T 1xim_A 188 GDILLPTAGHAIAFVQELERPELFGINPETGHEQMS---NLNFT---QGIAQALWHKKLFHIDLNGQ 248 (393)
T ss_dssp SEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHTT---TCCHH---HHHHHHHHHTCBCCCEECBC
T ss_pred CCEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHHC---CCCHH---HHHHHHHHCCCEEEEEECCC
T ss_conf 430248899999999981995316660324157535---89868---99999996597898981799
No 239
>>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (A:1-55,A:299-491)
Probab=23.86 E-value=50 Score=14.31 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHCC--CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 7889999986202--69638997254444147999974066146511211102
Q gi|254780438|r 117 QALLTKTVARLHN--LGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 117 ~~~L~~~i~~l~~--~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
...+.+.+..++. .|.|+.+|.++........+..++|...+.+-+..-..
T Consensus 88 ~~~~~~~l~~~~~~l~Gkrv~I~~~~~~~~~~~~~l~ELGm~vv~~~~~~~~~ 140 (248)
T 1m1n_A 88 KPEWEAVVAKYRPRLEGKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHN 140 (248)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCH
T ss_conf 99999999999987179836773685117999999998799799997057877
No 240
>>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygenase domain; 11002Z, glyoxylase, PSI-II, newyork structural genomix research consortium (nysgrc); 2.04A {Frankia SP} (A:68-136)
Probab=23.81 E-value=50 Score=14.30 Aligned_cols=42 Identities=24% Similarity=0.285 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHCCCCCEE----------EE-EECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf 3788999998620269638----------99-7254444147999974066146511211102444
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRI----------SL-FADGNGNEHSLQAAKLTGADCIELYTGPYGACYN 170 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girv----------SL-FIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~ 170 (261)
+.+.|..+.++|++.|+.+ |+ |-|||- ..+||+|.++...+.
T Consensus 15 s~~~l~~~~~~L~~~gv~~~~~~~~g~~~siyf~DPdG-------------~~iEl~~~~p~~~~~ 67 (69)
T 2rk0_A 15 SXTDLDVLEERLAKAGAAFTPTQELPFGWILAFRDADN-------------IALEAXLGREGHHHH 67 (69)
T ss_dssp SHHHHHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTC-------------CEEEEEEECTTSCTT
T ss_pred CHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCC-------------CEEEEEECCCCCCCC
T ss_conf 07899999999997898647866179849999999999-------------989999999855656
No 241
>>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} (A:44-145)
Probab=23.80 E-value=50 Score=14.30 Aligned_cols=50 Identities=12% Similarity=0.025 Sum_probs=38.0
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCC-CCHHHHHH
Q ss_conf 999862026963899725444414799997406614651121-11024443
Q gi|254780438|r 122 KTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTG-PYGACYNN 171 (261)
Q Consensus 122 ~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG-~Ya~a~~~ 171 (261)
.+---.+..|+++-+|+..+.++.-++.....|++.+..-.| .|..++..
T Consensus 36 alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~Ga~v~~~~~~~~~~~~~~~ 86 (102)
T 1o58_A 36 AIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEK 86 (102)
T ss_dssp HHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHH
T ss_pred HHHHHHHHCCCCEECCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHH
T ss_conf 888899875952323787656299998776169889990687403799999
No 242
>>1zy9_A Alpha-galactosidase; TM1192, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} (A:193-388)
Probab=23.45 E-value=38 Score=15.13 Aligned_cols=60 Identities=8% Similarity=-0.083 Sum_probs=35.0
Q ss_pred HHHHHHHHHC---CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 8999998507---2128971016555333578221333788999998620269638997254444
Q gi|254780438|r 82 TFLNLCERYK---PEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN 143 (261)
Q Consensus 82 e~i~ia~~ik---P~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~ 143 (261)
++++.+-.+| =+.+.|-|.=... .-+-+++. ..+.-++..++.+++.|+++-+-+.|...
T Consensus 21 ~v~~~l~~~k~lG~~~i~ld~~~~~~-~~~~~~~~-~~~~d~~~~v~~~h~~g~~v~~~~~~~~~ 83 (196)
T 1zy9_A 21 ETLKNLKLAKNFPFEVFQIDDAYEKD-IGDWLVTR-GDFPSVEEXAKVIAENGFIPGIWTAPFSV 83 (196)
T ss_dssp HHHHHHHHGGGTTCSEEEECTTSEEE-TTEEEEEC-TTCCCHHHHHHHHHHTTCEEEEEECTTEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCC-CCCEEECC-CCCCCHHHHHHHHHHCCCEEEEEEEECCC
T ss_conf 99999999871897199837786747-88545886-54689999999998679808999875145
No 243
>>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} (A:)
Probab=23.31 E-value=52 Score=14.24 Aligned_cols=24 Identities=8% Similarity=-0.115 Sum_probs=14.5
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 999824788334888999998874
Q gi|254780438|r 40 GLTVHPRPDQRHIRYTDLPEIRRL 63 (261)
Q Consensus 40 gITvH~R~DrRHI~~~Dv~~l~~~ 63 (261)
+.+-...-+..|+.++|+..+++.
T Consensus 20 ~~~~~~~~~~~~~~~~d~~~l~~~ 43 (305)
T 1h1n_A 20 NLPGVEGKDYIWPDPNTIDTLISK 43 (305)
T ss_dssp SSSCCBTTTBCCCCHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 878756568848999999999987
No 244
>>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} (A:1-46,A:311-454)
Probab=23.17 E-value=52 Score=14.22 Aligned_cols=66 Identities=11% Similarity=-0.042 Sum_probs=42.1
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---CCCCHHHHHHHHCCCCEEEE
Q ss_conf 9985072128971016555333578221333788999998620269638997254---44414799997406614651
Q gi|254780438|r 86 LCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG---NGNEHSLQAAKLTGADCIEL 160 (261)
Q Consensus 86 ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp---d~~q~~i~~a~~~Gad~VEl 160 (261)
+=..+.|.||.+||-... -......-..+...|+++||++-+-++- ..-.+.+..|...|+..+=+
T Consensus 68 lP~~LAP~qV~Ivpi~~~---------~~e~~~~a~~l~~~Lr~~gi~v~i~~~D~~~~slgkkik~Ad~~GiP~~Ii 136 (190)
T 1g5h_A 68 LHPCLAPIKVALDVGKGP---------TVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEXSVLFSVL 136 (190)
T ss_dssp CCTTTCSCCEEEEECSSC---------HHHHHHHHHHHHHHHHHTTCCEEEGGGSCCCSCHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCEEEEEECCCC---------CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 272117742899966788---------588999999999999987991675204577888608989777718988999
No 245
>>3llx_A Predicted amino acid aldolase or racemase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: LLP TRS; 1.50A {Idiomarina loihiensis} (A:22-239)
Probab=23.02 E-value=52 Score=14.20 Aligned_cols=170 Identities=11% Similarity=0.032 Sum_probs=88.8
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHH-HHHCCCEEEEEECCCCC
Q ss_conf 89999999974998999824788334888999998874000136741588834856899999-85072128971016555
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLC-ERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia-~~ikP~qvtLVPe~r~e 104 (261)
..+.++...++|++++.+ .+......+++... ....+-+.+....+.-.+. ....++.++.|
T Consensus 30 ~~~i~~~l~~~G~~~~~v--------as~~Ea~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v------ 92 (218)
T 3llx_A 30 TLEAAGYLLDSKSAPATV--------STLAEAEAYAKAGY---TDLLYAVGIAPAKLKRVAALRQQGINLHILL------ 92 (218)
T ss_dssp BHHHHHHHCSSTTSCEEE--------SSHHHHHHHHHTTC---CEEEEEEECCGGGHHHHHHHHHTTCEEEEEE------
T ss_pred CHHHHHHHHHCCCCEEEE--------CCHHHHHHHHHCCC---CCEEEECCCCCHHHHHHHHHHHCCCEEEEEE------
T ss_conf 899999999789998996--------47999999997799---9669923668077899998751177599996------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------CCC---HHHHHHHHCCCCEEEECCCC---CHHHH
Q ss_conf 3335782213337889999986202696389972544---------441---47999974066146511211---10244
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN---------GNE---HSLQAAKLTGADCIELYTGP---YGACY 169 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd---------~~q---~~i~~a~~~Gad~VElhTG~---Ya~a~ 169 (261)
.+.+.+....+..+..+..++++++-| +++ ..+.....+-...+..|-+. .....
T Consensus 93 ----------~s~~~l~~l~~~a~~~~~~~~v~i~vdtg~~r~g~~~~~~~~~~i~~~~~l~~~gi~~~~~~~~~~~~~~ 162 (218)
T 3llx_A 93 ----------DNITQAQAVVDYAAEFGQDFSVFIEIDSDDHRGGIKPSDSKLLTIAKTLGEHFTGLXTHAGGSYACNTEQ 162 (218)
T ss_dssp ----------CSHHHHHHHHHHHHHHTCCCEEEEEBCSSSSSSCBCTTCTHHHHHHHHHGGGEEEEECCCGGGGGCCSHH
T ss_pred ----------CCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH
T ss_conf ----------8799999999999875980477640135567688792589999975430133321113131102459889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCE---EEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 43564336668899987665415623---5207898987799999736996388425999
Q gi|254780438|r 170 NNPQQERIFLNKLAITAQLAQKMDLQ---INAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 170 ~~~~~~~~el~~i~~aa~~A~~lgL~---VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
.........++++........+.|.. ++.|=+..+... .+.+..++|-+|.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~s~g~S~~~~~~----~~~~~~~~vR~G~aI 218 (218)
T 3llx_A 163 GLKNFAKQECDAVRIARNNLETAGIHCAITSVGSTPTAHFG----EDFSDISEVRAGVYT 218 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEECCHHHHHHC----SCCTTCSEECCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH----HCCCCCEEEEEEEEE
T ss_conf 99999999999999864245524998668999386045454----038985799978763
No 246
>>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ... (A:)
Probab=23.00 E-value=52 Score=14.20 Aligned_cols=38 Identities=11% Similarity=0.141 Sum_probs=18.8
Q ss_pred HHHHHHHHCCCCEEEEECCCCC----------CCCCHHHHHHHHHHHC
Q ss_conf 9999999749989998247883----------3488899999887400
Q gi|254780438|r 28 HIGKIALQSGASGLTVHPRPDQ----------RHIRYTDLPEIRRLID 65 (261)
Q Consensus 28 ~~a~~~~~~GadgITvH~R~Dr----------RHI~~~Dv~~l~~~~~ 65 (261)
+....+.++|+|++.+--+-.. -+-.......|++.+.
T Consensus 25 ~li~~a~~~g~~~vkfq~~~~~~~~t~~~~~~~~~~~~~~~~l~~~~~ 72 (267)
T 2nwr_A 25 EIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKE 72 (267)
T ss_dssp HHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999999873767568754667788897453367882468899998764
No 247
>>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} (A:)
Probab=22.98 E-value=52 Score=14.19 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=53.1
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
..........|-..---+++.=-+|=|.|+.-. ....++..|++.|++...|+-....+..-+..+++-..--||-
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~VaLTFDDg~~~~----~t~~iL~~L~~~~v~aTFFv~g~~~~~~p~~~~~~~~~GheIg 99 (240)
T 1ny1_A 24 QLNSLIEKYDAFYLGNTKEKTIYLTFDNGYENG----YTPKVLDVLKKHRVTGTFFVTGHFVKDQPQLIKRXSDEGHIIG 99 (240)
T ss_dssp HHHHHHHHTTCBSBCCTTSSEEEEEEEESSCCS----CHHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCEEEECCCCCCEEEEEEECCCCCC----CHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHHHHHHCCCEEE
T ss_conf 566778644816777999987999886899834----2899999999759987999833112329899999985897898
Q ss_pred CCCCHHH
Q ss_conf 2111024
Q gi|254780438|r 162 TGPYGAC 168 (261)
Q Consensus 162 TG~Ya~a 168 (261)
--.|.+.
T Consensus 100 ~Ht~sH~ 106 (240)
T 1ny1_A 100 NHSFHHP 106 (240)
T ss_dssp ECCSSCC
T ss_pred ECCCCCC
T ss_conf 4466678
No 248
>>2bas_A YKUI protein; EAL domain, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.61A {Bacillus subtilis} (A:1-263)
Probab=22.76 E-value=53 Score=14.16 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHCCCCCEEEE-EECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3378899999862026963899-725444414799997406614651121110244435643366688999876654156
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISL-FADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMD 193 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSL-FIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg 193 (261)
.+...+...++.+++.|++++| -...+.. .+.....+.+|.|-|.-.-......+.. .. ..+......|+++|
T Consensus 154 ~~~~~~~~~i~~l~~~G~~l~lddfg~~~~--~~~~l~~l~~d~iKid~~~~~~~~~~~~-~~---~~~~~i~~~a~~~~ 227 (263)
T 2bas_A 154 GDIEQLYHXLAYYRTYGIKIAVDNIGKESS--NLDRIALLSPDLLKIDLQALKVSQPSPS-YE---HVLYSISLLARKIG 227 (263)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEEEETTTBC--CHHHHHHHCCSEEEEECTTTC----CCH-HH---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCCCC--HHHHHHHCCCCEEEECHHHHHHHCCCHH-HH---HHHHHHHHHHHHCC
T ss_conf 469999999998762485476447778875--0999986899999998899841403956-89---99999999999859
Q ss_pred CEEEECCCCCHHHHHH
Q ss_conf 2352078989877999
Q gi|254780438|r 194 LQINAGHDLTIQNIPN 209 (261)
Q Consensus 194 L~VnAGHgLn~~Nl~~ 209 (261)
+.|=|-.==|-+-+..
T Consensus 228 ~~via~GVE~~~~~~~ 243 (263)
T 2bas_A 228 AALLYEDIEANFQLQY 243 (263)
T ss_dssp CEEEEECCCSHHHHHH
T ss_pred CEEEEEECCCHHHHHH
T ss_conf 9899980884999999
No 249
>>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* (A:44-148)
Probab=22.75 E-value=53 Score=14.16 Aligned_cols=48 Identities=13% Similarity=-0.050 Sum_probs=36.3
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCC-CCHHHH
Q ss_conf 999862026963899725444414799997406614651121-110244
Q gi|254780438|r 122 KTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTG-PYGACY 169 (261)
Q Consensus 122 ~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG-~Ya~a~ 169 (261)
.+---.+..|+++-+|+..+.++.-++..+..|++.+..-.| .|.+++
T Consensus 38 alA~~a~~~g~~~~vv~p~~~~~~k~~~l~~~GA~V~~v~~~~~~~~~~ 86 (105)
T 2q3b_A 38 ALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAI 86 (105)
T ss_dssp HHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHH
T ss_pred HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 9999999829984685457578888347550576511146422212110
No 250
>>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondrial, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} (A:54-443)
Probab=22.72 E-value=53 Score=14.16 Aligned_cols=47 Identities=9% Similarity=-0.007 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEEC--CCCC----CHHHHHHHHCCCCEEEEC
Q ss_conf 3378899999862026963899725--4444----147999974066146511
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLFAD--GNGN----EHSLQAAKLTGADCIELY 161 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLFID--pd~~----q~~i~~a~~~Gad~VElh 161 (261)
.+.+.+..+++.+++.....-+... ++.+ ......+.+.|+|.|=++
T Consensus 226 ~~~~~~~~~i~~l~~~~~~~~i~~~~~~~~~~~~~~~~a~~~~~~g~~~i~~~ 278 (390)
T 1tv5_A 226 HMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIIS 278 (390)
T ss_dssp ---------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECC
T ss_conf 11000000000002335678569986999871467999999875065124303
No 251
>>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} (A:)
Probab=22.24 E-value=54 Score=14.10 Aligned_cols=138 Identities=8% Similarity=-0.039 Sum_probs=60.8
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCC-CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEE
Q ss_conf 78868998999999997499899982478-83348889999988740001367415888348568999998507212897
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRP-DQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITL 97 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~-DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtL 97 (261)
+.+....-..-+......+.+.+....-. +-.+..+.++..++... ..++-+-+-.+.+.-..+.+.-.|-+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~v~~~~~a~~a~~~G~D~i~v 305 (494)
T 1vrd_A 231 AVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYP-----DLPVVAGNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp EECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT-----TSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred EECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCC-----CCCEEEEEECCHHHHHHHHHHCCCEEEE
T ss_conf 98258521689999997799899995355316889999999998789-----9857987625799999999728988985
Q ss_pred EECCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC-CCHHHHHHHHCCCCEEEECCC
Q ss_conf 101655533357-822133378899999862026963899725444-414799997406614651121
Q gi|254780438|r 98 VPDDPHQLTSDH-GWDFLQNQALLTKTVARLHNLGSRISLFADGNG-NEHSLQAAKLTGADCIELYTG 163 (261)
Q Consensus 98 VPe~r~elTTeg-Gldv~~~~~~L~~~i~~l~~~girvSLFIDpd~-~q~~i~~a~~~Gad~VElhTG 163 (261)
-=-.=.+.++.- -....-......+.+.... +-++-++.|-.. +-..|-.|..+||+.|=+=|-
T Consensus 306 ~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~--~~~ipvi~dGGi~~g~dv~kAlalGA~~v~~G~~ 371 (494)
T 1vrd_A 306 GVGPGSICTTRVVAGVGVPQLTAVMECSEVAR--KYDVPIIADGGIRYSGDIVKALAAGAESVMVGSI 371 (494)
T ss_dssp CSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHH--TTTCCEEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CCCCCCCCCCHHHCCEECHHHHHHHHHHHHHH--CCCEEEEECCCCCCCCCEEEEEEECCCEEEECHH
T ss_conf 46588664542101253006788998876641--2633799647766368578999733645784506
No 252
>>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} (A:325-423)
Probab=21.97 E-value=55 Score=14.06 Aligned_cols=56 Identities=20% Similarity=0.201 Sum_probs=37.0
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCHHHHHHHHCCCCEE
Q ss_conf 7212897101655533357822133378899999862026--9638997254444147999974066146
Q gi|254780438|r 91 KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL--GSRISLFADGNGNEHSLQAAKLTGADCI 158 (261)
Q Consensus 91 kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~--girvSLFIDpd~~q~~i~~a~~~Gad~V 158 (261)
+|.||.++|-..+ ......++...|+++ |++|.+--....-.+.+..|...|+..+
T Consensus 2 ~P~~v~Ii~~~~~------------~~~~a~~l~~~Lr~~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~~ 59 (99)
T 1htt_A 2 PVVDIYLVASGAD------------TQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVA 59 (99)
T ss_dssp CSCSEEEEECSTT------------HHHHHHHHHHHHHHHSTTCCEEECCSCCCHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCCCCHH------------HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCEE
T ss_conf 4442222334257------------899999999999853998799995899999999999998697999
No 253
>>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} (A:1-32,A:117-171,A:218-457)
Probab=21.84 E-value=28 Score=16.08 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=52.4
Q ss_pred CCEEEEEECCC--HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC----
Q ss_conf 74158883485--689999985072128971016555333578221333788999998620269638997254444----
Q gi|254780438|r 70 KAELNIEGYPN--ETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN---- 143 (261)
Q Consensus 70 ~~elNiEg~p~--~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~---- 143 (261)
+++..+|++-+ .++..-+.++-|.-=++ |+ |...|......+.....-.+++-.|-++
T Consensus 133 ~i~iHlElAs~~d~~l~~~i~~ilp~VDSi------------Gm----NEqELa~l~~~lg~~~ls~~~~~~~~~~~~~v 196 (327)
T 1l2l_A 133 GIRAHLEFAFTPDEVVRLEIVKLLKHFYSV------------GL----NEVELASVVSVMGEKELAERIISKDPADPIAV 196 (327)
T ss_dssp TCEEEEECCCCSSHHHHHHHHHHGGGCSEE------------EE----CHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCCC------------CC----CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 871799854450999999999742406278------------73----89999999987179875420035797457899
Q ss_pred -CHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf -147999974066146511211102444
Q gi|254780438|r 144 -EHSLQAAKLTGADCIELYTGPYGACYN 170 (261)
Q Consensus 144 -q~~i~~a~~~Gad~VElhTG~Ya~a~~ 170 (261)
+-.....++.|..||-+||=.|.-...
T Consensus 197 ld~~~~l~~~~~L~RIhvHTl~y~l~it 224 (327)
T 1l2l_A 197 IEGLLKLIKETGVKRIHFHTYGYYLALT 224 (327)
T ss_dssp HHHHHHHHHHHCCSEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEEHHEEEEEE
T ss_conf 9999999887599889997012136688
No 254
>>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, structural genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=21.72 E-value=55 Score=14.03 Aligned_cols=36 Identities=28% Similarity=0.180 Sum_probs=25.7
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCEEE--EECCCCCCC
Q ss_conf 220788689989999999974998999--824788334
Q gi|254780438|r 16 RNRRNLPWPNLVHIGKIALQSGASGLT--VHPRPDQRH 51 (261)
Q Consensus 16 RnaRg~~~P~~~~~a~~~~~~GadgIT--vH~R~DrRH 51 (261)
|-+++..-.|-+.+-..|.+.|||+|= |++=.|..=
T Consensus 15 RG~~~~~PENTl~a~~~A~~~Gad~iE~DV~lTkDg~l 52 (272)
T 3ch0_A 15 RGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRV 52 (272)
T ss_dssp TTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCE
T ss_conf 99899998537999999998498989998899018988
No 255
>>2p22_D Hypothetical 12.0 kDa protein in ADE3-Ser2 intergenic region; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} (D:)
Probab=21.58 E-value=29 Score=15.94 Aligned_cols=11 Identities=27% Similarity=0.498 Sum_probs=6.9
Q ss_pred HHHCCCCCCCC
Q ss_conf 32207886899
Q gi|254780438|r 15 LRNRRNLPWPN 25 (261)
Q Consensus 15 LRnaRg~~~P~ 25 (261)
||||+|.++|.
T Consensus 12 L~Na~g~~~P~ 22 (79)
T 2p22_D 12 LYNKYGKDFPQ 22 (79)
T ss_dssp CEESSSTTSCC
T ss_pred CHHHHCCCCCH
T ss_conf 40210220620
No 256
>>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for structural genomics, JCSG; 1.92A {Thermotoga maritima} (A:86-350)
Probab=21.23 E-value=57 Score=13.96 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHCCCCEEEE---ECCC---CCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 9899999999749989998---2478---83348889999988740001367415888348
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTV---HPRP---DQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP 79 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITv---H~R~---DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p 79 (261)
..++.++.+.++|++.+-+ .||. ..+.+.++....++..+.+. +++|=.+..-
T Consensus 36 ~~~~~i~~l~~aG~~~vr~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--gi~~~~~i~~ 94 (265)
T 1vr6_A 36 MLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEALG 94 (265)
T ss_dssp HHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECSS
T ss_pred HHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECC
T ss_conf 9999999988707000244110412245435685588888888677535--9724886231
No 257
>>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} (A:)
Probab=21.23 E-value=57 Score=13.96 Aligned_cols=138 Identities=6% Similarity=-0.064 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCCCCH----HHHHHHHHHHC---CCCCCCEEEEEECCC-------HHHHHHHHH
Q ss_conf 9989999999974998999824788334888----99999887400---013674158883485-------689999985
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQRHIRY----TDLPEIRRLID---EQFPKAELNIEGYPN-------ETFLNLCER 89 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~DrRHI~~----~Dv~~l~~~~~---~~~~~~elNiEg~p~-------~e~i~ia~~ 89 (261)
....+....+...|...|.+|.-.+.....+ .-+..+..++. .......+++-.... .++-.++.+
T Consensus 39 ~~~~~~~~~~k~~G~N~vR~~~~~~~~~~~~~~d~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 118 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSAENNRSEAIRFFQEMAR 118 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 08999999999769978998440210378466908899999999999997799787443358998658999999999999
Q ss_pred H--CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-CCCCHHHHHHHHC---CCCEEEECCC
Q ss_conf 0--72128971016555333578221333788999998620269638997254-4441479999740---6614651121
Q gi|254780438|r 90 Y--KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG-NGNEHSLQAAKLT---GADCIELYTG 163 (261)
Q Consensus 90 i--kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp-d~~q~~i~~a~~~---Gad~VElhTG 163 (261)
. .|.-+..- --+|.....-+.. ....++.....+++.+-...+++.+ ............. ..|.+.+|..
T Consensus 119 ~~~~p~v~~~~--l~NEp~~~~~~~~--~~~~~~~~~~~ir~~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~h~Y 194 (291)
T 1egz_A 119 KYGNKPNVIYE--IYNEPLQVSWSNT--IKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLHFY 194 (291)
T ss_dssp HHTTSTTEEEE--CCSCCCSCCTTTT--HHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCCSSSEEEEEEEE
T ss_pred HHCCCCCEEEE--ECCCCCCCCCHHH--HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCC
T ss_conf 85799640432--0356788988899--9999999999999739996899757751222221213778888789997127
Q ss_pred CC
Q ss_conf 11
Q gi|254780438|r 164 PY 165 (261)
Q Consensus 164 ~Y 165 (261)
+.
T Consensus 195 ~~ 196 (291)
T 1egz_A 195 AG 196 (291)
T ss_dssp TT
T ss_pred CC
T ss_conf 88
No 258
>>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} (A:)
Probab=21.03 E-value=39 Score=15.08 Aligned_cols=131 Identities=9% Similarity=-0.029 Sum_probs=76.4
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCEEEEEECCCCC------CHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 97101655533357822133378899999862026-9638997254444------1479999740661465112111024
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL-GSRISLFADGNGN------EHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~-girvSLFIDpd~~------q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
+..|......|-++|=++.+...++..+++.+++. +..+.+.+-+..+ ......+.+.|+|.+-.+.+.....
T Consensus 173 ~~~~~~~~~~~~~~g~~l~~~~~~~~~ii~~vr~~~~~~~~vk~~~~~~~~~~~~~~~a~~l~~~G~~~~~~~~~~~~~~ 252 (336)
T 1f76_A 173 ISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAXHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRS 252 (336)
T ss_dssp CCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCT
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 78988756567742577776589999999999975287631899954899989999999999966998899992675211
Q ss_pred HHH-------------HHHHHHHHHHHHHHHHHHHHCCCEEEECCC-CCHHHHHHHHHHCCCCEEEEEHHHHH-HH
Q ss_conf 443-------------564336668899987665415623520789-89877999997369963884259999-99
Q gi|254780438|r 169 YNN-------------PQQERIFLNKLAITAQLAQKMDLQINAGHD-LTIQNIPNLINAIPYISEISVGHAFA-AT 229 (261)
Q Consensus 169 ~~~-------------~~~~~~el~~i~~aa~~A~~lgL~VnAGHg-Ln~~Nl~~~i~~Ip~I~EvsIGHaiI-se 229 (261)
+.. .......+..+ .....+..-++-|=+.=| -+.+-+.+.++ -+.+=|.||-+++ ++
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~i~~~~~~~ipvi~~GGI~~~~da~k~l~--~GAD~V~igra~l~~~ 325 (336)
T 1f76_A 253 LVQGXKNCDQTGGLSGRPLQLKSTEII-RRLSLELNGRLPIIGVGGIDSVIAAREKIA--AGASLVQIYSGFIFKG 325 (336)
T ss_dssp TSTTSTTTTCSSEEEEGGGHHHHHHHH-HHHHHHHTTSSCEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCCCCEEEEECCCCCHHHHHHHHH--CCCCEEEECHHHHHCC
T ss_conf 334642123457656632369999999-999998289957999899999999999998--0999999787878269
No 259
>>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A (A:)
Probab=20.95 E-value=57 Score=13.92 Aligned_cols=88 Identities=9% Similarity=-0.073 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEE-EECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 33378899999862026963899-72544441479999740661465112111024443564336668899987665415
Q gi|254780438|r 114 LQNQALLTKTVARLHNLGSRISL-FADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKM 192 (261)
Q Consensus 114 ~~~~~~L~~~i~~l~~~girvSL-FIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~l 192 (261)
..+...+...+..|++.|++++| -...+.. .+.....+..|.|-|+-.-.-.. .+... ...+.....+|+++
T Consensus 149 ~~~~~~~~~~~~~l~~~G~~laldd~g~~~~--~~~~l~~l~~~~ikid~~~~~~~-~~~~~----~~~~~~~~~~a~~~ 221 (268)
T 3hv8_A 149 TSYLKQAKQLTQGLATLHCQAAISQFGCSLN--PFNALKHLTVQFIKIDGSFVQDL-NQVEN----QEILKGLIAELHEQ 221 (268)
T ss_dssp HHTHHHHHHHHHHHHHTTCEEEEEEETCSSS--TTGGGGTCCCSEEEECGGGGSST-TSHHH----HHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHCEEEEECCCCCCC--CHHHHHHHHHHHHHCCHHHHHHH-HCCCH----HHHHHHHHHHHHHC
T ss_conf 1258988888877765420035404888766--36677777777863268888643-00200----67999999999984
Q ss_pred CCEEEECCCCCHHHHH
Q ss_conf 6235207898987799
Q gi|254780438|r 193 DLQINAGHDLTIQNIP 208 (261)
Q Consensus 193 gL~VnAGHgLn~~Nl~ 208 (261)
|+.|=|-.==|-+-+.
T Consensus 222 ~~~via~gVe~~~~~~ 237 (268)
T 3hv8_A 222 QKLSIVPFVESASVLA 237 (268)
T ss_dssp TCEEEECCCCSHHHHH
T ss_pred CCCEEEEECCCHHHHH
T ss_conf 9968999379499999
No 260
>>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri} (B:119-258)
Probab=20.63 E-value=58 Score=13.88 Aligned_cols=71 Identities=14% Similarity=0.136 Sum_probs=49.1
Q ss_pred EEE-ECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 888-3485689999985072128971016555333578221333788999998620269638997254444147999974
Q gi|254780438|r 74 NIE-GYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 74 NiE-g~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
.+- .-|.+++++.+.+.+|+.|+|-= -...+......+++.+++.+..+.+++---.- +-+.+.+
T Consensus 38 ~lG~~~p~~~l~~~~~~~~~d~V~lS~------------~~~~~~~~~~~~~~~lr~~~~~~~v~vGG~~~--~~~~~~~ 103 (140)
T 2i2x_B 38 DLGRDVPAEEVLAAVQKEKPIMLTGTA------------LMTTTMYAFKEVNDMLLENGIKIPFACGGGAV--NQDFVSQ 103 (140)
T ss_dssp EEEEECCSHHHHHHHHHHCCSEEEEEC------------CCTTTTTHHHHHHHHHHTTTCCCCEEEESTTC--CHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHCCCCEEEEEE------------CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC--CHHHHHH
T ss_conf 658889879999999971788598652------------34532588999999998469997399889869--9999998
Q ss_pred CCCCEE
Q ss_conf 066146
Q gi|254780438|r 153 TGADCI 158 (261)
Q Consensus 153 ~Gad~V 158 (261)
+|+|.+
T Consensus 104 ~g~d~~ 109 (140)
T 2i2x_B 104 FALGVY 109 (140)
T ss_dssp STTEEE
T ss_pred HCCCEE
T ss_conf 298847
No 261
>>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} (A:1-204,A:341-569)
Probab=20.61 E-value=58 Score=13.87 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=31.6
Q ss_pred HHHHHHHHCCCEEEEEECCCC-----CCCCCCCCCHH-----------------HHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 999998507212897101655-----53335782213-----------------33788999998620269638997254
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDPH-----QLTSDHGWDFL-----------------QNQALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r~-----elTTegGldv~-----------------~~~~~L~~~i~~l~~~girvSLFIDp 140 (261)
-++...+.-=+.|-|-|--.. ..++..|.+.. +..+.|+..|+.+|+.||+|=+=+-+
T Consensus 125 ~l~ylk~lGv~~i~l~P~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~g~~~e~~~lv~~~H~~Gi~Vi~D~V~ 204 (433)
T 1gjw_A 125 LLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFIP 204 (433)
T ss_dssp THHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 21999975998899699731787566776789887657776484435565445889999999999999879999996323
No 262
>>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} (A:160-267)
Probab=20.41 E-value=59 Score=13.85 Aligned_cols=44 Identities=16% Similarity=0.177 Sum_probs=31.5
Q ss_pred HCCCCCEEEEEECCCC-CCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 2026963899725444-41479999740661465112111024443
Q gi|254780438|r 127 LHNLGSRISLFADGNG-NEHSLQAAKLTGADCIELYTGPYGACYNN 171 (261)
Q Consensus 127 l~~~girvSLFIDpd~-~q~~i~~a~~~Gad~VElhTG~Ya~a~~~ 171 (261)
.+..|+++-+|+.|+. .+..++.....|++ |.++.|.|.++...
T Consensus 44 a~~~g~~~~iv~p~~~~~~~k~~~l~~~Ga~-V~~~~~~~~~~~~~ 88 (108)
T 1e5x_A 44 CASAGIPSIVFLPANKISXAQLVQPIANGAF-VLSIDTDFDGCXKL 88 (108)
T ss_dssp HHHHTCCEEEEEEGGGCCHHHHHHHHHTTCE-EEEEESCHHHHHHH
T ss_pred HHHCCCEEEEEECCCCCCHHHHHHHHHCCCE-EEEECCCHHHHHHH
T ss_conf 9984981899984998649999999976985-78779807899999
No 263
>>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix K1} (A:124-225)
Probab=20.15 E-value=59 Score=13.81 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=38.1
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC-CCCCHHHHHHH
Q ss_conf 9998620269638997254444147999974066146511-21110244435
Q gi|254780438|r 122 KTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY-TGPYGACYNNP 172 (261)
Q Consensus 122 ~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh-TG~Ya~a~~~~ 172 (261)
.+---.+..|+++-+|+..+.++.-++..+..|++.+..- .+.|..+....
T Consensus 36 alA~~a~~~g~~~~i~~p~~~~~~k~~~l~~~GA~V~~v~~~~~~~~~~~~a 87 (102)
T 1wkv_A 36 ALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPEAPSTVHLLPRV 87 (102)
T ss_dssp HHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETTCSSSGGGHHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
T ss_conf 9999999839968999830001345556640586236648741357889987
No 264
>>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, alternative splicing, disease mutation, glycosyltransferase, lyase; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3ewy_A* 3ewx_A* ... (A:)
Probab=20.08 E-value=18 Score=17.43 Aligned_cols=168 Identities=14% Similarity=0.035 Sum_probs=93.1
Q ss_pred CEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH--HHHHHHHHHHHHCCCCCEEE--EE-ECC-CCCC
Q ss_conf 415888348568999998507212897101655533357822133--37889999986202696389--97-254-4441
Q gi|254780438|r 71 AELNIEGYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQ--NQALLTKTVARLHNLGSRIS--LF-ADG-NGNE 144 (261)
Q Consensus 71 ~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~--~~~~L~~~i~~l~~~girvS--LF-IDp-d~~q 144 (261)
.=+.+--...++-++++....++.+.+ ++|++... ....++...+..+..++.|- ++ .|- ....
T Consensus 34 ~ivalD~~~~~~~l~~~~~~~~~i~~~----------~~g~~~~~~~G~~~i~~l~~~~~~~~~~vi~D~k~~Di~~~~~ 103 (260)
T 3eww_A 34 LCLSADVSLARELLQLADALGPSICML----------KTHVDILNDFTLDVMKELITLAKCHEFLIFENRKFADIGNTVK 103 (260)
T ss_dssp EEEECCCSCHHHHHHHHHHHGGGCSEE----------EECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEE----------EECHHHHHCCCHHHHHHHHHHHHHCCCEEECCCEECCCCHHHH
T ss_conf 899966799999999999857846299----------9898998157789999999987615961306864469547899
Q ss_pred ---HHHHHHHHCCCCEEEECCCCCHHHHH----------H------------HHHHHHHHHHHHHHHHHHHHCCC-----
Q ss_conf ---47999974066146511211102444----------3------------56433666889998766541562-----
Q gi|254780438|r 145 ---HSLQAAKLTGADCIELYTGPYGACYN----------N------------PQQERIFLNKLAITAQLAQKMDL----- 194 (261)
Q Consensus 145 ---~~i~~a~~~Gad~VElhTG~Ya~a~~----------~------------~~~~~~el~~i~~aa~~A~~lgL----- 194 (261)
..++.+.+.|+|+|=+|.-.-.+... . ..+.....+.+...+..+.+.|.
T Consensus 104 ~~~~~i~~~~~~Gad~vtv~~~~g~~~~~~~~~~~~~~~~~~~~l~~t~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~ 183 (260)
T 3eww_A 104 KQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISG 183 (260)
T ss_dssp HHHHCTTTCGGGTCSEEEEESTTCTHHHHHHHHHHTTTTCEEEEECCCCSTTCCCCTHHHHHHHHHHHHTTTTEEEEECS
T ss_pred HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99998763024434135541455269999999751113655247874044544201328999999999715245575012
Q ss_pred -------------------EEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -------------------3520789898779999973699638842599999999940999999999999741056
Q gi|254780438|r 195 -------------------QINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDN 252 (261)
Q Consensus 195 -------------------~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~ 252 (261)
.+-+|=|-+..++..++.. -+.+=+.+|-+|+.. --..++++.+++.+++.+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~i~~~gG~~~~~~~~~~~~-~Gad~ivvGr~I~~a---~dp~~~~~~l~~~i~~~~~~ 256 (260)
T 3eww_A 184 SRVSMKPEFLHLTPGVQLEAGGDNLGQQYNSPQEVIGK-RGSDIIIVGRGIISA---ADRLEAAEMYRKAAWEAYLS 256 (260)
T ss_dssp SCCCCCTTSEEEECSBCSSSEECTTSCEEBCHHHHHTT-SCCSEEEESHHHHTS---SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH-CCCCEEEECCCCCCC---CCHHHHHHHHHHHHHHHHHH
T ss_conf 24101320488447753378886888676799999987-499999989423779---89999999999999999998
Done!