HHsearch results for GI: 254780438 and protein with PDBid: 1z41_A
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=92.55 E-value=0.68 Score=26.14 Aligned_cols=125 Identities=14% Similarity=0.051 Sum_probs=59.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCC-----CCEEEEEE------CCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 5533357822133378899999862026-----96389972------544441479999740661465112111024443
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNL-----GSRISLFA------DGNGNEHSLQAAKLTGADCIELYTGPYGACYNN 171 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~-----girvSLFI------Dpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~ 171 (261)
+..|-|-|=++.....++.++++..++. .+|+|..- +++-....++...+.|+|.+++..|.|......
T Consensus 180 N~R~DeYGGs~enR~Rf~~Eii~avr~~v~~~~~vri~~~~~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~~~~~~~~~~ 259 (338)
T 1z41_A 180 NHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADIN 259 (338)
T ss_dssp CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCC
T ss_conf 85678677777787889999999999985467648854543457886446699999999983974000133430135444
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 5643366688999876654156235207898-987799999736996388425999999999
Q gi|254780438|r 172 PQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 172 ~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
.. . .....+.+..+... ++-|=+--++ +.+-...+++. ...+=|.+|-++|++--+
T Consensus 260 ~~-~-~~~~~~~~~ik~~~--~~pvi~~G~i~~~~~ae~~l~~-g~~D~V~~gR~~iadP~~ 316 (338)
T 1z41_A 260 VF-P-GYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQN-GRADLIFIGRELLRDPFF 316 (338)
T ss_dssp CC-T-TTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHT-TSCSEEEECHHHHHCTTH
T ss_pred CC-C-CCCHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCHH
T ss_conf 68-8-62078999999875--9528996894999999999987-995523865998869299