HHsearch results for GI: 254780438 and protein with PDBid: 3gk0_A
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=100.00 E-value=0 Score=724.35 Aligned_cols=247 Identities=30% Similarity=0.462 Sum_probs=236.1
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 84533221443223220788689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
++|||||||||||||||||+++|||++||.+|+++||||||||||||||||||+||++|++.+ ++||||||+|++
T Consensus 31 ~~rL~VNIdhVAtLRnaRg~~~Pd~~~aA~~~~~~GAdgITvHlReDrRHI~d~Dv~~l~~~~-----~~~lNlE~a~~~ 105 (278)
T 3gk0_A 31 AIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRV-----KTRMNLECAVTP 105 (278)
T ss_dssp GSEEEEECHHHHHHHHHHSSSCSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHC-----SSCEEEEECSSH
T ss_pred CEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHH-----CCCCCCCCCCCH
T ss_conf 248866411154201058989999999999999829986895268875657589999999873-----775577888709
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+|+++|+++||+|||||||+|+|+|||||||+.++.++|+++|++|+++|||||||||||++| |++|+++|+|+||||
T Consensus 106 e~i~ia~~~kP~qvtLVPE~r~elTTegGlDv~~~~~~L~~~i~~Lk~~gIrVSLFIDPd~~q--i~~A~~~Gad~IELh 183 (278)
T 3gk0_A 106 EMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQ--IRAAHETGAPVIELH 183 (278)
T ss_dssp HHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHHTCSEEEEC
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH--HHHHHHCCCCEEEEE
T ss_conf 999999966998799888885554555766206259999999999997498179983698789--999850599979972
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 21110244435643366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r 162 TGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC 241 (261)
Q Consensus 162 TG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~ 241 (261)
||+||++|+..+ ...||++|+.++++|+++||+|||||||||+|++. +++||+|+||||||||||||||+||++||++
T Consensus 184 TG~YA~a~~~~~-~~~el~~i~~aa~~A~~lGL~VnAGHgLn~~Nl~~-i~~ip~i~EvnIGHaIIseAl~~Gl~~aV~~ 261 (278)
T 3gk0_A 184 TGRYADAHDAAE-QQREFERIATGVDAGIALGLKVNAGHGLHYTNVQA-IAALPGIAELNIGHAIVAHAVFVGWDNAVRE 261 (278)
T ss_dssp CHHHHTCSSHHH-HHHHHHHHHHHHHHHHHTTCEEEECTTCCTTTHHH-HHTCTTEEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHH-HHCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 335533254320-07999999999999997187574678988667899-8618997698567999999999729999999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999974105655403
Q gi|254780438|r 242 FRRACGQHLDNTMRLT 257 (261)
Q Consensus 242 ~~~ii~~~~~~~~~~~ 257 (261)
|+++|+++|..++++-
T Consensus 262 m~~ii~~aR~~~~~~~ 277 (278)
T 3gk0_A 262 MKAIMVAARVAALHGG 277 (278)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCC
T ss_conf 9999999844242179