HHsearch results for GI: 254780438 and protein with PDBid: 3ju2_A
>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti}
Probab=91.06 E-value=0.85 Score=25.47 Aligned_cols=121 Identities=15% Similarity=0.220 Sum_probs=80.0
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE---EEEE-
Q ss_conf 845332214432232207886899899999999749989998247883348889999988740001367415---8883-
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL---NIEG- 77 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el---NiEg- 77 (261)
|..||+|. +|+|.- -++-++...|.++|.+||-+.+ ..+.+.|+.++++.+... ++++ +.-+
T Consensus 5 ~~~ls~~~---~~~~~~-----~~l~e~l~~~a~~G~~~IEl~~----~~~~~~~~~e~~~~l~~~--gl~v~~~~~~~~ 70 (284)
T 3ju2_A 5 VEGLSINL---ATIREQ-----CGFAEAVDICLKHGITAIAPWR----DQVAAIGLGEAGRIVRAN--GLKLTGLCRGGF 70 (284)
T ss_dssp CTTEEEEG---GGGTTT-----CCHHHHHHHHHHTTCCEEECBH----HHHHHHCHHHHHHHHHHT--TCEESCEEEEEC
T ss_pred CCCHHHHH---HHHCCC-----CCHHHHHHHHHHHCCCEEEECC----CCCCCCCHHHHHHHHHHC--CCEEEEEECCCC
T ss_conf 33332579---987589-----9999999999981999899777----667878999999999983--995999876766
Q ss_pred --CCC-----------HHHHHHHHHHCCCEEEEEECCCC--CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf --485-----------68999998507212897101655--53335782213337889999986202696389972
Q gi|254780438|r 78 --YPN-----------ETFLNLCERYKPEQITLVPDDPH--QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 78 --~p~-----------~e~i~ia~~ikP~qvtLVPe~r~--elTTegGldv~~~~~~L~~~i~~l~~~girvSLFI 138 (261)
.+. .++++++..+-...++++|-.+. +.+.+..|+. -.+.|+.+....++.|+++++=-
T Consensus 71 ~~~~d~~~~~~~i~~~~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~~--~~~~l~~l~~~A~~~gv~l~~E~ 144 (284)
T 3ju2_A 71 FPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRM--VVEGIAAVLPHARAAGVPLAIEP 144 (284)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHTBSCEEEECBCCCTTCCCHHHHHHH--HHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 688998999999999999999999949983695679866788999999999--99999999999874362589861