Query gi|254780438|ref|YP_003064851.1| pyridoxine 5'-phosphate synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 261
No_of_seqs 139 out of 1399
Neff 4.9
Searched_HMMs 23785
Date Mon May 30 10:45:00 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780438.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gk0_A PNP synthase, pyridoxin 100.0 0 0 724.4 25.6 247 2-257 31-277 (278)
2 1m5w_A Pyridoxal phosphate bio 100.0 0 0 714.6 26.0 240 2-250 3-242 (243)
3 3o6c_A PNP synthase, pyridoxin 100.0 0 0 701.0 23.1 236 2-248 3-260 (260)
4 3c6c_A 3-keto-5-aminohexanoate 97.0 0.004 1.7E-07 41.5 8.9 124 26-152 50-198 (316)
5 3no5_A Uncharacterized protein 96.2 0.027 1.1E-06 35.8 8.4 133 26-165 32-176 (275)
6 3chv_A Prokaryotic domain of u 96.1 0.03 1.3E-06 35.5 8.2 135 25-166 35-181 (284)
7 3dx5_A Uncharacterized protein 95.8 0.067 2.8E-06 33.1 8.9 150 4-165 2-176 (286)
8 3iwp_A Copper homeostasis prot 95.5 0.17 7.3E-06 30.2 15.5 171 26-223 48-238 (287)
9 3e02_A Uncharacterized protein 95.5 0.098 4.1E-06 31.9 8.9 123 26-152 34-184 (311)
10 3inp_A D-ribulose-phosphate 3- 95.4 0.19 7.8E-06 30.0 17.4 201 22-248 38-245 (246)
11 2bdq_A Copper homeostasis prot 95.4 0.19 8E-06 29.9 13.8 178 29-226 13-209 (224)
12 3lot_A Uncharacterized protein 95.4 0.065 2.7E-06 33.2 7.5 123 26-152 34-186 (314)
13 1rpx_A Protein (ribulose-phosp 95.3 0.2 8.3E-06 29.9 9.7 198 22-244 21-225 (230)
14 3e49_A Uncharacterized protein 95.2 0.074 3.1E-06 32.8 7.4 136 26-165 34-204 (311)
15 2fli_A Ribulose-phosphate 3-ep 95.1 0.23 9.8E-06 29.4 16.0 199 22-247 14-219 (220)
16 3iix_A Biotin synthetase, puta 95.1 0.11 4.6E-06 31.6 7.9 87 110-197 109-195 (348)
17 2fli_A Ribulose-phosphate 3-ep 95.1 0.11 4.5E-06 31.7 7.8 164 4-186 45-218 (220)
18 3igs_A N-acetylmannosamine-6-p 95.0 0.24 1E-05 29.2 18.0 186 27-250 39-231 (232)
19 3cqj_A L-ribulose-5-phosphate 95.0 0.24 1E-05 29.3 9.4 188 24-223 30-262 (295)
20 3inp_A D-ribulose-phosphate 3- 94.8 0.21 9E-06 29.6 8.9 164 4-186 69-243 (246)
21 3ajx_A 3-hexulose-6-phosphate 94.7 0.17 7.2E-06 30.3 8.1 194 22-245 8-205 (207)
22 1tqj_A Ribulose-phosphate 3-ep 94.4 0.16 6.6E-06 30.5 7.3 204 22-250 15-225 (230)
23 3exr_A RMPD (hexulose-6-phosph 93.9 0.2 8.5E-06 29.8 7.0 203 22-248 13-218 (221)
24 3ctl_A D-allulose-6-phosphate 93.8 0.45 1.9E-05 27.4 9.2 204 22-251 11-222 (231)
25 2hk0_A D-psicose 3-epimerase; 93.7 0.47 2E-05 27.3 8.7 191 20-223 32-264 (309)
26 2qul_A D-tagatose 3-epimerase; 93.5 0.35 1.5E-05 28.1 7.8 154 2-165 1-189 (290)
27 3kws_A Putative sugar isomeras 93.4 0.52 2.2E-05 27.0 9.0 202 23-245 37-283 (287)
28 1q6o_A Humps, 3-keto-L-gulonat 93.4 0.52 2.2E-05 26.9 10.6 201 22-249 11-214 (216)
29 3f4w_A Putative hexulose 6 pho 93.1 0.34 1.4E-05 28.2 7.1 200 22-250 8-211 (211)
30 2x7v_A Probable endonuclease 4 92.9 0.61 2.5E-05 26.5 9.7 100 2-112 1-123 (287)
31 1h1y_A D-ribulose-5-phosphate 92.9 0.62 2.6E-05 26.4 8.4 205 22-253 17-228 (228)
32 2zvr_A Uncharacterized protein 92.6 0.67 2.8E-05 26.2 14.2 206 25-249 42-285 (290)
33 1z41_A YQJM, probable NADH-dep 92.6 0.68 2.9E-05 26.1 11.3 125 103-232 180-316 (338)
34 1h1y_A D-ribulose-5-phosphate 92.4 0.72 3E-05 26.0 18.1 168 4-191 48-226 (228)
35 1i60_A IOLI protein; beta barr 92.0 0.29 1.2E-05 28.7 5.6 216 23-249 13-275 (278)
36 1r30_A Biotin synthase; SAM ra 91.5 0.64 2.7E-05 26.3 6.9 125 81-215 102-233 (369)
37 1twd_A Copper homeostasis prot 91.1 0.97 4.1E-05 25.1 14.9 195 27-250 11-246 (256)
38 3ju2_A Uncharacterized protein 91.1 0.85 3.6E-05 25.5 7.2 121 2-138 5-144 (284)
39 3ju2_A Uncharacterized protein 91.0 0.82 3.5E-05 25.6 7.1 139 78-229 19-186 (284)
40 3jr2_A Hexulose-6-phosphate sy 90.6 1.1 4.5E-05 24.8 10.3 200 22-249 14-216 (218)
41 1qwg_A PSL synthase;, (2R)-pho 90.5 0.72 3E-05 26.0 6.4 79 115-203 52-137 (251)
42 3hgj_A Chromate reductase; TIM 89.4 1.3 5.6E-05 24.1 10.6 81 149-232 247-327 (349)
43 1muw_A Xylose isomerase; atomi 89.0 1.4 5.9E-05 24.0 8.7 137 23-161 32-214 (386)
44 1vhn_A Putative flavin oxidore 88.3 0.51 2.1E-05 27.0 4.3 147 71-227 61-217 (318)
45 1tqx_A D-ribulose-5-phosphate 87.1 1.8 7.8E-05 23.2 15.6 203 22-252 16-227 (227)
46 2g0w_A LMO2234 protein; putati 86.2 1.2 4.9E-05 24.5 5.2 212 22-249 34-289 (296)
47 3gfz_A Klebsiella pneumoniae B 85.7 1.9 8E-05 23.1 6.0 109 89-214 271-381 (413)
48 1yad_A Regulatory protein TENI 85.4 2.2 9.4E-05 22.6 10.4 188 25-252 30-218 (221)
49 3kzp_A LMO0111 protein, putati 84.9 2.3 9.9E-05 22.4 11.9 135 67-207 69-213 (235)
50 1vd6_A Glycerophosphoryl diest 84.6 2.4 0.0001 22.3 11.6 147 16-199 14-192 (224)
51 3ivs_A Homocitrate synthase, m 83.8 2.6 0.00011 22.1 14.9 177 13-206 45-240 (423)
52 2i2x_B MTAC, methyltransferase 83.4 2.5 0.0001 22.3 5.8 100 41-157 126-226 (258)
53 1v5x_A PRA isomerase, phosphor 80.8 3.3 0.00014 21.4 7.9 163 27-222 11-175 (203)
54 1ps9_A 2,4-dienoyl-COA reducta 80.6 3.4 0.00014 21.3 9.5 127 103-232 177-319 (671)
55 3l5l_A Xenobiotic reductase A; 80.5 3.4 0.00014 21.3 13.4 127 102-232 193-334 (363)
56 1xrs_B D-lysine 5,6-aminomutas 80.4 3.4 0.00015 21.3 6.4 68 79-158 168-238 (262)
57 1xla_A D-xylose isomerase; iso 80.0 3.6 0.00015 21.2 8.9 172 23-202 32-251 (394)
58 2h9a_B CO dehydrogenase/acetyl 79.9 3.6 0.00015 21.2 9.8 169 13-200 63-246 (310)
59 1qtw_A Endonuclease IV; DNA re 79.6 3.7 0.00015 21.1 14.2 78 25-102 13-113 (285)
60 3kru_A NADH:flavin oxidoreduct 79.0 2.8 0.00012 21.9 4.8 33 198-231 283-315 (343)
61 2q02_A Putative cytoplasmic pr 77.4 4.2 0.00018 20.7 11.0 134 24-165 19-174 (272)
62 3cu2_A Ribulose-5-phosphate 3- 77.2 4.3 0.00018 20.6 10.4 197 21-245 23-235 (237)
63 1u83_A Phosphosulfolactate syn 76.5 2.1 9E-05 22.7 3.6 49 118-166 80-135 (276)
64 3ble_A Citramalate synthase fr 75.6 4.7 0.0002 20.3 16.0 184 13-206 25-230 (337)
65 1bxb_A Xylose isomerase; xylos 73.9 5.2 0.00022 20.1 14.7 142 22-165 31-218 (387)
66 2zds_A Putative DNA-binding pr 73.3 5.3 0.00022 20.0 8.0 217 22-246 14-318 (340)
67 2yxb_A Coenzyme B12-dependent 73.1 5.4 0.00023 19.9 5.3 70 77-158 55-125 (161)
68 2gou_A Oxidoreductase, FMN-bin 72.7 2.6 0.00011 22.2 3.2 75 148-232 257-331 (365)
69 3eeg_A 2-isopropylmalate synth 71.6 5.8 0.00024 19.7 12.0 143 13-161 12-171 (325)
70 3l55_A B-1,4-endoglucanase/cel 71.5 4.5 0.00019 20.5 4.3 42 24-65 51-98 (353)
71 3k30_A Histamine dehydrogenase 70.9 6 0.00025 19.6 7.2 79 147-225 162-267 (690)
72 3nav_A Tryptophan synthase alp 69.5 6.4 0.00027 19.4 15.1 204 22-249 29-268 (271)
73 1wu7_A Histidyl-tRNA synthetas 69.4 6.5 0.00027 19.4 6.3 69 81-161 314-389 (434)
74 3obe_A Sugar phosphate isomera 68.4 6.8 0.00029 19.3 10.4 122 3-136 21-168 (305)
75 1xim_A D-xylose isomerase; iso 68.2 6.9 0.00029 19.2 11.7 135 23-160 32-213 (393)
76 3gr7_A NADPH dehydrogenase; fl 67.7 7 0.00029 19.2 14.1 126 103-232 180-316 (340)
77 3hvb_A Protein FIMX; EAL phosp 66.2 7.5 0.00031 19.0 7.4 108 90-214 303-411 (437)
78 1wx0_A Transaldolase; structur 65.8 7.6 0.00032 18.9 14.1 193 25-244 9-216 (223)
79 2qw5_A Xylose isomerase-like T 65.7 7.6 0.00032 18.9 4.5 41 26-66 33-76 (335)
80 1k77_A EC1530, hypothetical pr 64.5 8 0.00034 18.8 11.0 197 2-223 1-240 (260)
81 1oya_A OLD yellow enzyme; oxid 63.2 8.5 0.00036 18.6 9.5 15 148-162 179-193 (400)
82 1edg_A Endoglucanase A; family 62.9 8.6 0.00036 18.6 4.5 36 30-65 67-108 (380)
83 1nsj_A PRAI, phosphoribosyl an 62.7 8.6 0.00036 18.5 8.5 165 27-222 12-181 (205)
84 3ewb_X 2-isopropylmalate synth 61.8 9 0.00038 18.4 6.9 177 24-211 27-219 (293)
85 3gi1_A LBP, laminin-binding pr 61.0 9.2 0.00039 18.3 4.9 45 117-162 214-259 (286)
86 2bas_A YKUI protein; EAL domai 60.8 9.3 0.00039 18.3 7.4 94 90-199 138-233 (431)
87 1o94_A Tmadh, trimethylamine d 58.2 10 0.00043 18.0 12.8 12 53-64 79-90 (729)
88 1zcc_A Glycerophosphodiester p 58.0 10 0.00044 18.0 6.5 33 16-49 8-43 (248)
89 1icp_A OPR1, 12-oxophytodienoa 57.5 7.2 0.0003 19.1 3.1 33 198-231 306-338 (376)
90 3hv8_A Protein FIMX; EAL phosp 56.8 11 0.00045 17.9 6.6 127 70-214 104-242 (268)
91 3ff4_A Uncharacterized protein 56.2 10 0.00043 18.0 3.7 77 96-197 33-109 (122)
92 3civ_A Endo-beta-1,4-mannanase 56.1 9.3 0.00039 18.3 3.5 51 84-136 59-115 (343)
93 1xp3_A Endonuclease IV; NFO, D 55.0 12 0.00049 17.7 4.2 172 24-247 23-216 (307)
94 3mmw_A Endoglucanase; TIM barr 54.8 12 0.00049 17.6 4.9 128 5-140 14-170 (317)
95 3icg_A Endoglucanase D; cellul 54.5 12 0.00049 17.6 4.7 20 117-136 85-104 (515)
96 1vpx_A Protein (transaldolase 54.0 12 0.0005 17.6 15.0 199 23-250 19-225 (230)
97 2o1e_A YCDH; alpha-beta protei 53.5 12 0.00051 17.5 4.8 45 117-162 225-270 (312)
98 3lmz_A Putative sugar isomeras 53.4 12 0.00051 17.5 9.2 214 3-247 18-255 (257)
99 2r14_A Morphinone reductase; H 52.6 8.6 0.00036 18.5 2.8 72 152-232 266-337 (377)
100 2hl0_A Threonyl-tRNA synthetas 52.4 13 0.00053 17.4 4.4 49 147-197 65-113 (143)
101 2tps_A Protein (thiamin phosph 52.3 13 0.00054 17.4 13.6 191 22-251 29-225 (227)
102 3l23_A Sugar phosphate isomera 52.1 13 0.00054 17.4 9.3 198 4-216 14-269 (303)
103 3n9r_A Fructose-bisphosphate a 51.3 13 0.00055 17.3 10.6 188 26-228 30-260 (307)
104 3mxt_A Pantothenate synthetase 49.5 14 0.00059 17.1 6.1 67 81-158 11-92 (285)
105 1j93_A UROD, uroporphyrinogen 49.4 14 0.00059 17.1 7.6 94 118-216 231-350 (353)
106 1ccw_A Protein (glutamate muta 49.2 14 0.00059 17.1 5.1 74 73-158 35-116 (137)
107 2nwr_A 2-dehydro-3-deoxyphosph 48.8 11 0.00047 17.7 3.0 25 147-172 208-234 (267)
108 3lc0_A Histidyl-tRNA synthetas 47.5 15 0.00063 16.9 5.8 12 125-136 382-393 (456)
109 1fob_A Beta-1,4-galactanase; B 47.5 15 0.00063 16.9 3.9 135 28-168 31-220 (334)
110 1wa3_A 2-keto-3-deoxy-6-phosph 47.5 15 0.00063 16.9 14.4 188 19-250 17-204 (205)
111 3pfm_A Ggdef domain protein; P 47.4 15 0.00063 16.9 6.5 160 26-215 56-227 (243)
112 2p0o_A Hypothetical protein DU 47.2 15 0.00062 16.9 3.4 104 34-164 89-201 (372)
113 3a32_A Probable threonyl-tRNA 46.1 16 0.00066 16.7 6.4 80 71-156 305-397 (471)
114 2e8y_A AMYX protein, pullulana 45.5 16 0.00068 16.7 4.1 21 118-138 316-336 (718)
115 2ekc_A AQ_1548, tryptophan syn 45.0 16 0.00069 16.6 17.0 215 10-250 6-260 (262)
116 2f6u_A GGGPS, (S)-3-O-geranylg 44.5 10 0.00043 18.1 2.2 178 22-229 18-224 (234)
117 1vli_A Spore coat polysacchari 44.3 17 0.0007 16.6 3.5 35 12-46 32-66 (385)
118 1v8f_A Pantoate-beta-alanine l 44.2 17 0.00071 16.5 6.9 53 94-158 18-85 (276)
119 1b1y_A Protein (beta-amylase); 44.1 17 0.00071 16.5 3.4 18 185-202 360-377 (500)
120 3cx3_A Lipoprotein; zinc-bindi 43.8 17 0.00072 16.5 3.9 42 118-160 213-255 (284)
121 1vyr_A Pentaerythritol tetrani 43.5 17 0.00072 16.5 12.3 38 194-232 295-332 (364)
122 2d59_A Hypothetical protein PH 43.3 17 0.00073 16.4 3.5 113 53-198 11-129 (144)
123 2hsa_B 12-oxophytodienoate red 43.2 17 0.00073 16.4 12.6 81 148-231 273-356 (402)
124 3b8i_A PA4872 oxaloacetate dec 43.0 18 0.00074 16.4 5.0 182 30-229 34-240 (287)
125 2wqp_A Polysialic acid capsule 42.8 18 0.00074 16.4 4.9 35 13-47 24-58 (349)
126 1evl_A Threonyl-tRNA synthetas 41.9 18 0.00077 16.3 6.1 55 90-156 296-350 (401)
127 2prs_A High-affinity zinc upta 41.3 19 0.00078 16.2 4.7 45 116-161 208-253 (284)
128 1pq4_A Periplasmic binding pro 40.9 19 0.00079 16.2 6.7 42 118-160 224-266 (291)
129 1wdp_A Beta-amylase; (beta/alp 40.3 17 0.00072 16.5 2.8 63 182-244 363-443 (495)
130 1kwg_A Beta-galactosidase; TIM 40.1 16 0.00066 16.7 2.6 25 118-142 118-142 (645)
131 1fa2_A Beta-amylase; TIM barre 39.9 17 0.00072 16.5 2.8 10 35-44 45-54 (498)
132 1iuk_A Hypothetical protein TT 39.7 19 0.00081 16.1 3.0 87 89-199 37-123 (140)
133 3mz2_A Glycerophosphoryl diest 39.3 20 0.00084 16.0 7.8 28 19-46 38-69 (292)
134 1vem_A Beta-amylase; beta-alph 38.9 18 0.00078 16.3 2.8 41 26-66 31-77 (516)
135 3l52_A Orotidine 5'-phosphate 36.8 15 0.00062 16.9 2.0 72 84-162 53-134 (284)
136 2fi1_A Hydrolase, haloacid deh 36.7 22 0.00092 15.8 3.9 84 71-164 99-182 (190)
137 3ij5_A 3-deoxy-D-manno-octulos 36.5 11 0.00046 17.8 1.3 79 78-164 37-122 (211)
138 1lwj_A 4-alpha-glucanotransfer 36.3 21 0.00089 15.8 2.8 26 116-141 68-93 (441)
139 1vhc_A Putative KHG/KDPG aldol 36.0 22 0.00094 15.7 13.3 190 18-250 23-217 (224)
140 1vr6_A Phospho-2-dehydro-3-deo 35.9 22 0.00094 15.7 3.9 16 149-164 298-315 (350)
141 3elf_A Fructose-bisphosphate a 35.8 22 0.00095 15.7 11.0 111 111-226 135-279 (349)
142 1gjw_A Maltodextrin glycosyltr 35.6 23 0.00095 15.7 4.7 22 117-138 181-202 (637)
143 1o2d_A Alcohol dehydrogenase, 35.6 23 0.00095 15.7 4.5 37 133-169 177-218 (371)
144 2zic_A Dextran glucosidase; TI 35.1 23 0.00097 15.6 3.2 17 27-43 177-193 (543)
145 1wv2_A Thiazole moeity, thiazo 34.6 23 0.00099 15.5 11.6 185 20-226 26-219 (265)
146 1dbt_A Orotidine 5'-phosphate 34.5 24 0.00099 15.5 4.1 72 79-164 14-91 (239)
147 2fds_A Orotidine-monophosphate 34.4 18 0.00077 16.3 2.2 71 85-162 110-187 (352)
148 1jr5_A 10 kDa anti-sigma facto 34.0 6.1 0.00025 19.6 -0.3 46 181-227 29-80 (90)
149 1xvl_A Mn transporter, MNTC pr 34.0 24 0.001 15.5 4.7 39 118-157 240-279 (321)
150 1iho_A Pantoate--beta-alanine 34.0 17 0.00073 16.4 2.0 56 92-158 21-90 (283)
151 2dh2_A 4F2 cell-surface antige 33.2 25 0.001 15.4 3.2 16 26-41 124-139 (424)
152 1zco_A 2-dehydro-3-deoxyphosph 33.0 25 0.001 15.4 2.9 135 26-173 76-240 (262)
153 1ny1_A Probable polysaccharide 32.8 17 0.0007 16.6 1.8 61 100-165 42-105 (240)
154 3gka_A N-ethylmaleimide reduct 32.3 25 0.0011 15.3 13.3 39 193-232 287-325 (361)
155 1pii_A N-(5'phosphoribosyl)ant 32.2 26 0.0011 15.3 8.8 25 196-221 403-427 (452)
156 2jep_A Xyloglucanase; family 5 32.2 26 0.0011 15.3 4.8 35 31-65 76-117 (395)
157 3guz_A Pantothenate synthetase 31.5 26 0.0011 15.2 5.8 68 82-159 9-91 (176)
158 1nyr_A Threonyl-tRNA synthetas 31.3 26 0.0011 15.2 5.8 66 80-156 524-598 (645)
159 2ze0_A Alpha-glucosidase; TIM 30.9 27 0.0011 15.1 2.9 31 47-79 71-101 (555)
160 3inn_A Pantothenate synthetase 30.9 27 0.0011 15.1 6.3 66 81-159 29-112 (314)
161 1rrm_A Lactaldehyde reductase; 30.7 27 0.0011 15.1 4.6 37 133-169 172-213 (386)
162 1u6m_A Acetyltransferase, GNAT 30.7 27 0.0011 15.1 4.8 57 50-106 5-69 (199)
163 2ior_A Chaperone protein HTPG; 29.9 27 0.0012 15.1 2.5 71 93-167 83-166 (235)
164 3fuc_A Purine nucleoside phosp 29.6 19 0.0008 16.2 1.6 57 139-197 167-236 (284)
165 1qf6_A THRRS, threonyl-tRNA sy 29.4 28 0.0012 15.0 6.2 67 80-158 518-593 (642)
166 2qjg_A Putative aldolase MJ040 28.6 29 0.0012 14.9 4.0 132 7-160 30-185 (273)
167 2dxq_A AGR_C_4057P, acetyltran 28.6 29 0.0012 14.9 3.0 105 50-164 9-124 (150)
168 2iw0_A Chitin deacetylase; hyd 28.4 29 0.0012 14.9 4.8 55 104-166 45-109 (254)
169 2yyu_A Orotidine 5'-phosphate 28.4 29 0.0012 14.9 4.7 72 80-165 16-93 (246)
170 2q5c_A NTRC family transcripti 28.4 28 0.0012 15.1 2.3 47 115-166 126-172 (196)
171 1z4e_A Transcriptional regulat 28.2 30 0.0012 14.8 4.6 110 50-165 8-129 (153)
172 2r6o_A Putative diguanylate cy 28.2 30 0.0013 14.8 7.0 123 115-253 160-283 (294)
173 1y80_A Predicted cobalamin bin 28.1 30 0.0013 14.8 6.8 39 124-163 109-148 (210)
174 1xi3_A Thiamine phosphate pyro 27.5 30 0.0013 14.8 14.3 184 25-250 27-214 (215)
175 2p4s_A Purine nucleoside phosp 27.2 25 0.001 15.4 1.9 31 38-68 76-106 (373)
176 3d3a_A Beta-galactosidase; pro 27.2 31 0.0013 14.7 2.5 15 29-43 42-56 (612)
177 1xm3_A Thiazole biosynthesis p 27.2 31 0.0013 14.7 10.4 176 20-226 19-210 (264)
178 2ztj_A Homocitrate synthase; ( 26.9 31 0.0013 14.7 17.2 182 13-207 9-207 (382)
179 2oog_A Glycerophosphoryl diest 26.9 27 0.0011 15.1 2.0 33 16-49 30-66 (287)
180 2htm_A Thiazole biosynthesis p 26.9 31 0.0013 14.7 8.0 133 20-165 19-156 (268)
181 1vl0_A DTDP-4-dehydrorhamnose 26.9 29 0.0012 14.9 2.2 13 235-247 279-291 (292)
182 2ffc_A Orotidine 5-monophospha 26.8 29 0.0012 14.9 2.2 72 84-162 119-197 (353)
183 1qy5_A Endoplasmin; GRP94, NEC 26.8 27 0.0011 15.2 2.0 10 131-140 176-185 (269)
184 3hh8_A Metal ABC transporter s 26.6 32 0.0013 14.7 5.9 41 118-159 219-260 (294)
185 2whl_A Beta-mannanase, baman5; 26.5 32 0.0013 14.6 3.5 108 25-139 32-157 (294)
186 2egz_A 3-dehydroquinate dehydr 26.3 32 0.0013 14.6 2.4 24 24-49 10-33 (219)
187 1r9c_A Glutathione transferase 26.0 32 0.0014 14.6 4.2 62 95-169 54-128 (139)
188 1x7f_A Outer surface protein; 25.9 32 0.0014 14.6 3.7 24 117-140 183-206 (385)
189 2dqw_A Dihydropteroate synthas 25.8 33 0.0014 14.5 5.8 122 20-142 45-200 (294)
190 3faw_A Reticulocyte binding pr 25.6 33 0.0014 14.5 4.1 14 147-160 302-315 (877)
191 3ktc_A Xylose isomerase; putat 25.6 33 0.0014 14.5 7.2 232 4-248 9-296 (333)
192 1h4v_B Histidyl-tRNA synthetas 25.6 33 0.0014 14.5 5.7 12 220-231 305-316 (421)
193 1vqt_A Orotidine 5'-phosphate 25.4 33 0.0014 14.5 2.3 39 122-162 49-93 (213)
194 1ydo_A HMG-COA lyase; TIM-barr 25.4 33 0.0014 14.5 11.8 144 13-161 12-177 (307)
195 1viz_A PCRB protein homolog; s 25.3 33 0.0014 14.5 2.3 55 22-81 18-72 (240)
196 3bpw_A Orotidine 5'-phosphate 24.9 33 0.0014 14.5 2.2 70 85-162 108-185 (342)
197 1xx1_A Smase I, sphingomyelina 24.6 31 0.0013 14.7 2.0 26 24-49 14-41 (285)
198 3bmv_A Cyclomaltodextrin gluca 24.2 29 0.0012 14.9 1.7 31 106-136 96-135 (683)
199 2wsk_A Glycogen debranching en 24.1 35 0.0015 14.3 4.3 21 118-138 242-262 (657)
200 3no3_A Glycerophosphodiester p 24.0 35 0.0015 14.3 9.2 25 22-46 18-43 (238)
201 2ejc_A Pantoate--beta-alanine 23.9 35 0.0015 14.3 6.6 65 82-158 9-90 (280)
202 2zru_A Isopentenyl-diphosphate 23.9 35 0.0015 14.3 3.5 168 82-257 139-328 (368)
203 1y81_A Conserved hypothetical 23.8 35 0.0015 14.3 3.3 79 96-198 43-121 (138)
204 1mio_A Nitrogenase molybdenum 23.5 36 0.0015 14.3 4.6 47 116-162 318-366 (533)
205 3bo9_A Putative nitroalkan dio 23.3 36 0.0015 14.2 7.7 132 8-167 8-156 (326)
206 1ceo_A Cellulase CELC; glycosy 23.2 36 0.0015 14.2 4.5 103 31-140 35-173 (343)
207 3khs_A Purine nucleoside phosp 23.1 30 0.0013 14.8 1.6 61 136-198 161-234 (285)
208 1vs1_A 3-deoxy-7-phosphoheptul 23.1 29 0.0012 14.9 1.6 14 149-162 230-245 (276)
209 3m47_A Orotidine 5'-phosphate 23.0 37 0.0015 14.2 3.0 71 79-163 23-100 (228)
210 1y0e_A Putative N-acetylmannos 22.8 37 0.0016 14.2 16.2 176 25-227 24-208 (223)
211 2pz0_A Glycerophosphoryl diest 22.5 37 0.0016 14.2 2.0 23 21-43 22-45 (252)
212 2vr5_A Glycogen operon protein 22.4 38 0.0016 14.1 4.5 59 83-141 207-290 (718)
213 3bul_A Methionine synthase; tr 22.4 38 0.0016 14.1 4.5 74 74-164 131-205 (579)
214 1gte_A Dihydropyrimidine dehyd 22.2 38 0.0016 14.1 13.9 71 26-97 650-734 (1025)
215 2czd_A Orotidine 5'-phosphate 22.2 38 0.0016 14.1 3.4 29 22-50 62-91 (208)
216 3odg_A Xanthosine phosphorylas 21.9 32 0.0013 14.6 1.6 91 138-251 172-282 (287)
217 1ua7_A Alpha-amylase; beta-alp 21.9 39 0.0016 14.0 2.8 23 116-138 73-95 (422)
218 3a5f_A Dihydrodipicolinate syn 21.8 39 0.0016 14.0 3.8 122 22-165 81-209 (291)
219 1zja_A Trehalulose synthase; s 21.6 39 0.0016 14.0 2.6 31 47-79 72-102 (557)
220 2p22_D Hypothetical 12.0 kDa p 21.5 21 0.00087 15.9 0.6 12 14-25 11-22 (79)
221 2osx_A Endoglycoceramidase II; 21.2 40 0.0017 14.0 3.7 34 108-141 232-265 (481)
222 2eja_A URO-D, UPD, uroporphyri 21.1 40 0.0017 13.9 8.8 95 118-214 217-332 (338)
223 2fe7_A Probable N-acetyltransf 21.0 40 0.0017 13.9 2.8 106 50-165 14-132 (166)
224 2wan_A Pullulanase; hydrolase, 20.8 41 0.0017 13.9 4.3 14 147-160 475-488 (921)
225 1d3c_A Cyclodextrin glycosyltr 20.6 37 0.0016 14.1 1.7 23 116-138 114-136 (686)
226 1v1h_A Fibritin, fiber protein 20.6 13 0.00053 17.4 -0.7 14 193-206 54-67 (103)
227 1yx1_A Hypothetical protein PA 20.5 41 0.0017 13.9 9.0 168 29-216 28-223 (264)
228 2aaa_A Alpha-amylase; glycosid 20.1 42 0.0018 13.8 2.7 26 115-140 95-120 (484)
229 3cyv_A URO-D, UPD, uroporphyri 20.0 42 0.0018 13.8 9.8 92 118-214 225-345 (354)
No 1
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=100.00 E-value=0 Score=724.35 Aligned_cols=247 Identities=30% Similarity=0.462 Sum_probs=236.1
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 84533221443223220788689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
++|||||||||||||||||+++|||++||.+|+++||||||||||||||||||+||++|++.+ ++||||||+|++
T Consensus 31 ~~rL~VNIdhVAtLRnaRg~~~Pd~~~aA~~~~~~GAdgITvHlReDrRHI~d~Dv~~l~~~~-----~~~lNlE~a~~~ 105 (278)
T 3gk0_A 31 AIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRV-----KTRMNLECAVTP 105 (278)
T ss_dssp GSEEEEECHHHHHHHHHHSSSCSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHC-----SSCEEEEECSSH
T ss_pred CEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHH-----CCCCCCCCCCCH
T ss_conf 248866411154201058989999999999999829986895268875657589999999873-----775577888709
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+|+++|+++||+|||||||+|+|+|||||||+.++.++|+++|++|+++|||||||||||++| |++|+++|+|+||||
T Consensus 106 e~i~ia~~~kP~qvtLVPE~r~elTTegGlDv~~~~~~L~~~i~~Lk~~gIrVSLFIDPd~~q--i~~A~~~Gad~IELh 183 (278)
T 3gk0_A 106 EMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQ--IRAAHETGAPVIELH 183 (278)
T ss_dssp HHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHHTCSEEEEC
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH--HHHHHHCCCCEEEEE
T ss_conf 999999966998799888885554555766206259999999999997498179983698789--999850599979972
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 21110244435643366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r 162 TGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC 241 (261)
Q Consensus 162 TG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~ 241 (261)
||+||++|+..+ ...||++|+.++++|+++||+|||||||||+|++. +++||+|+||||||||||||||+||++||++
T Consensus 184 TG~YA~a~~~~~-~~~el~~i~~aa~~A~~lGL~VnAGHgLn~~Nl~~-i~~ip~i~EvnIGHaIIseAl~~Gl~~aV~~ 261 (278)
T 3gk0_A 184 TGRYADAHDAAE-QQREFERIATGVDAGIALGLKVNAGHGLHYTNVQA-IAALPGIAELNIGHAIVAHAVFVGWDNAVRE 261 (278)
T ss_dssp CHHHHTCSSHHH-HHHHHHHHHHHHHHHHHTTCEEEECTTCCTTTHHH-HHTCTTEEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHH-HHCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 335533254320-07999999999999997187574678988667899-8618997698567999999999729999999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999974105655403
Q gi|254780438|r 242 FRRACGQHLDNTMRLT 257 (261)
Q Consensus 242 ~~~ii~~~~~~~~~~~ 257 (261)
|+++|+++|..++++-
T Consensus 262 m~~ii~~aR~~~~~~~ 277 (278)
T 3gk0_A 262 MKAIMVAARVAALHGG 277 (278)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCC
T ss_conf 9999999844242179
No 2
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=100.00 E-value=0 Score=714.56 Aligned_cols=240 Identities=33% Similarity=0.521 Sum_probs=230.3
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 84533221443223220788689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
.++||||||||||||||||+++|||++||.+|+++||||||||||||||||||+||+.|++.+ +++|||||+|++
T Consensus 3 ~~~L~VNidhiAtlRnaRg~~~Pd~~~~A~~~~~~GadgITvHlR~DrRHI~~~Dv~~l~~~~-----~~~lNlE~~~~~ 77 (243)
T 1m5w_A 3 ELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTL-----DTRMNLEMAVTE 77 (243)
T ss_dssp CCEEEEECHHHHHHHHTSSCCCSCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHC-----SSEEEEEECSSH
T ss_pred CCEEEEEECCEEEHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHH-----HHHHHCCCCCCH
T ss_conf 515764300032001058989989999999999829986894468886655257999998865-----555403677648
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+|+++|+++||+|||||||+|+|+|||||||+.++.++|++++++|+++|||||||||||++| |++|+++|+|+||||
T Consensus 78 e~~~ia~~~kP~qvtLVPe~r~elTTegGld~~~~~~~L~~~i~~lk~~girvSLFiDPd~~q--i~~a~~~Gad~IElh 155 (243)
T 1m5w_A 78 EMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQ--IKAAAEVGAPFIEIH 155 (243)
T ss_dssp HHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHTTCSEEEEE
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHH--HHHHHHCCCCEEEEE
T ss_conf 899999976998699815887755877756322658899999999987598169983688899--999987199958740
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 21110244435643366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r 162 TGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC 241 (261)
Q Consensus 162 TG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~ 241 (261)
||+||+++.+.... .++++|+.++++|+++||+|||||||||+|++. +++||+|+||||||||||||||+||++||++
T Consensus 156 TG~YA~a~~~~~~~-~el~~i~~aa~~A~~lGL~VnAGHgLn~~Nl~~-i~~i~~i~EvnIGHaiI~~al~~Gl~~aV~~ 233 (243)
T 1m5w_A 156 TGCYADAKTDAEQA-QELARIAKAATFAASLGLKVNAGHGLTYHNVKA-IAAIPEMHELNIGHAIIGRAVMTGLKDAVAE 233 (243)
T ss_dssp CHHHHHCCSHHHHH-HHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHH-HHTCTTEEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred CCHHHCCCCCCHHH-HHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHH-HHCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 10000224310257-899999999999997599563699988766899-8448997698467999999999739999999
Q ss_pred HHHHHHHHH
Q ss_conf 999997410
Q gi|254780438|r 242 FRRACGQHL 250 (261)
Q Consensus 242 ~~~ii~~~~ 250 (261)
|+++|+++|
T Consensus 234 ~~~ii~~ar 242 (243)
T 1m5w_A 234 MKRLMLEAR 242 (243)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHCC
T ss_conf 999998704
No 3
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} PDB: 3o6d_A*
Probab=100.00 E-value=0 Score=701.05 Aligned_cols=236 Identities=29% Similarity=0.466 Sum_probs=222.8
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 84533221443223220788689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
+++||||||||||||||||+++|||++||.+|+++| ||||||||||||||||+||++|++.+ ++|||+||+|++
T Consensus 3 ~~~LsVNidhiAtlRnaRg~~~Pd~~~aa~~~~~~G-dgITvHlR~DrRHI~~~Dv~~l~~~~-----~~~~NlE~~~~~ 76 (260)
T 3o6c_A 3 AMLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHG-DQITLHVREDRRHAQDFDLENIIKFC-----KSPVNLECALND 76 (260)
T ss_dssp CCEEEEECHHHHHHHHHHTSCCSCHHHHHHHHHHHS-SEEEEECCTTCSSSCHHHHHHHHHHC-----SSCEEEEECSCH
T ss_pred CCEEEEEECEEEEECCCCCCCCCCHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHHHHC-----CCCCCCCCCCCH
T ss_conf 606865402044101069999969999999999839-91797069887888799999888612-----574356889985
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+|+++|++++|+|||||||+|+|+|||||||+.+ ++|++++++|+++|||||||||||++| |++|+++|+|+||||
T Consensus 77 e~i~ia~~~kP~qvtLVPe~r~elTTegGld~~~--~~L~~~i~~lk~~gIrVSLFIDPd~~~--i~~A~~~Gad~VElh 152 (260)
T 3o6c_A 77 EILNLALKLKPHRVTLVPEKREELTTEGGLCLNH--AKLKQSIEKLQNANIEVSLFINPSLED--IEKSKILKAQFIELH 152 (260)
T ss_dssp HHHHHHHHHCCSEEEECCCSGGGBCTTSSBCTTC--TTHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHTTCSEEEEC
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHHCCCCEEEEE
T ss_conf 8999999669975897668866432468844006--779999998653496289996899899--999842798989983
Q ss_pred CCCCHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEE
Q ss_conf 21110244435----------------------64336668899987665415623520789898779999973699638
Q gi|254780438|r 162 TGPYGACYNNP----------------------QQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISE 219 (261)
Q Consensus 162 TG~Ya~a~~~~----------------------~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~E 219 (261)
|||||++|+.. .+...|+++|+.++++|+++||+|||||||||+|++.| ++||+|+|
T Consensus 153 TG~YA~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~i~~aa~~A~~~GL~VnAGHgLn~~Nl~~l-~~ip~i~E 231 (260)
T 3o6c_A 153 TGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHGLNYKNVKPV-VKIKEICE 231 (260)
T ss_dssp CHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECTTCCTTTTHHH-HTCTTCCE
T ss_pred CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHH-HCCCCCEE
T ss_conf 45666442033221100133332221224566779999999999999999876985636899887778998-35899758
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 84259999999994099999999999974
Q gi|254780438|r 220 ISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 220 vsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
|||||||||||||+||++||++|+++|++
T Consensus 232 vsIGHaiI~eAl~~Gl~~aV~~~~~ii~r 260 (260)
T 3o6c_A 232 LNIGQSIVARSVFTGLQNAILEMKELIKR 260 (260)
T ss_dssp EEECHHHHHHHHHHCHHHHHHHHHHHTCC
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 84569999999997399999999999659
No 4
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; YP_293392.1, prokaryotic protein of unknown function (DUF849), structural genomics; HET: MSE; 1.72A {Ralstonia eutropha JMP134}
Probab=97.05 E-value=0.004 Score=41.50 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=84.5
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHH-HHHHHCCCCCCCEEEEEE----------------------CCC
Q ss_conf 8999999997499899982478--833488899999-887400013674158883----------------------485
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPE-IRRLIDEQFPKAELNIEG----------------------YPN 80 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg----------------------~p~ 80 (261)
+++.|..|.++||.-|-+|.|. |-||..|-+++. +-.-+....+++.+|+-. .+.
T Consensus 50 ia~~A~~c~~AGAsivHlHvRd~~dG~~s~D~~~y~e~i~~Ir~~~pd~ii~~TTg~~~~~~~~~~~~~~~~~~~~~~~~ 129 (316)
T 3c6c_A 50 IADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALPESDVVPV 129 (316)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECTTCEECCH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCCCCCH
T ss_conf 99999999982753899764578889857999999999999997679827984378566667670111103565455788
Q ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 689999985072128971016555333578221333788999998620269638997254444147999974
Q gi|254780438|r 81 ETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 81 ~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
.+....+...+|+.+++=.-..+......++-.......+..+.+.+++.||++.+=+- |+. .+..+..
T Consensus 130 ~~~~~~~~~~~Pe~~s~~~~s~n~~~~~~~~~~~n~~~~~~~~~~~~~e~gi~pe~e~y-d~g--~l~~~~~ 198 (316)
T 3c6c_A 130 AERVKHLEDCLPEIASLDITTGNQVEGKLEFVYLNTTRTLRAMARRFQELGIKPELEVF-SPG--DILFGKQ 198 (316)
T ss_dssp HHHTHHHHHHCCSEEEEECCCEEEEETTEEEEECCCHHHHHHHHHHHHHHTCEEEEEES-SHH--HHHHHHH
T ss_pred HHHHHCHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEEE-CHH--HHHHHHH
T ss_conf 99852300158642146666655435654514418889999999999974984589997-679--9999999
No 5
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=96.22 E-value=0.027 Score=35.80 Aligned_cols=133 Identities=15% Similarity=0.116 Sum_probs=84.4
Q ss_pred HHHHHHHHHHCCCCEEEEECC-CCCCCCCHHHHH-HHHHHHCCCCCCCEEEEEE---CCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 899999999749989998247-883348889999-9887400013674158883---48568999998507212897101
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPR-PDQRHIRYTDLP-EIRRLIDEQFPKAELNIEG---YPNETFLNLCERYKPEQITLVPD 100 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R-~DrRHI~~~Dv~-~l~~~~~~~~~~~elNiEg---~p~~e~i~ia~~ikP~qvtLVPe 100 (261)
+.+.|..|.++||.-+-+|.| +|-+|..|-|.+ ++-.-+....+++.+|+-. +...+-...+..++|+++++-.=
T Consensus 32 ia~~A~~c~~AGAsivHlH~Rd~dg~~s~d~~~y~e~i~~iR~~~p~~ii~~Tt~g~~~~~~~~~~~~~~~Pe~~s~~~~ 111 (275)
T 3no5_A 32 QVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNERGAMLSLRPDMASLATG 111 (275)
T ss_dssp HHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGGGTTGGGCCSEEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 99999999981774899885389989678999999999999986688356303665656477776665018553556643
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH---HHCC----CCEEEECCCCC
Q ss_conf 65553335782213337889999986202696389972544441479999---7406----61465112111
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA---KLTG----ADCIELYTGPY 165 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a---~~~G----ad~VElhTG~Y 165 (261)
.-+ .++.+ .....+.+..+.+.+++.||+.++=+- |+.. +..+ .+.| .-.+.|.-|.+
T Consensus 112 s~n--~~~~~--~~n~~~~~~~~~~~~~~~gi~pe~~~~-d~~~--l~~~~~l~~~g~~~~p~~~~~vlg~~ 176 (275)
T 3no5_A 112 SVN--FPTRV--YDNPPELVDWLAAEMKTYGIKPEVEAF-DLSM--IFQAAAMQAAGAIVGPLHIQFVMGIK 176 (275)
T ss_dssp CEE--CSSSE--ECCCHHHHHHHHHHHHHTTCEEEEEES-STHH--HHHHHHHHHHTSSCSSCEEEEEECCT
T ss_pred CCC--CCCCC--CCCCHHHHHHHHHHHHHCCCEEEEEEC-CHHH--HHHHHHHHHCCCCCCCCEEEEEEECC
T ss_conf 554--55534--469899999999999980931579962-5889--99999998537877994699999567
No 6
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=96.10 E-value=0.03 Score=35.49 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHCCCCEEEEECC-CCCCCCCHHHHH-HHHHHHCCCCCCCEEEEEE---CCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 9899999999749989998247-883348889999-9887400013674158883---4856899999850721289710
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPR-PDQRHIRYTDLP-EIRRLIDEQFPKAELNIEG---YPNETFLNLCERYKPEQITLVP 99 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R-~DrRHI~~~Dv~-~l~~~~~~~~~~~elNiEg---~p~~e~i~ia~~ikP~qvtLVP 99 (261)
.+++.|..|.++||.-+-+|+| +|-||..|-+++ ++-.-+....+++.+++-. +..++....++..+|+.+.+--
T Consensus 35 Eia~~A~~c~~AGAsivH~H~Rd~~G~~sld~~~y~e~i~~ir~~~p~~ii~~tt~g~~~~~e~r~~~~~~~p~~~s~~~ 114 (284)
T 3chv_A 35 EQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGMLPLKPDMASLSV 114 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTGGGCCSEEEECC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999998188689986418993977788999999999998678028975578777607887653212356554664
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC---C----CCEEEECCCCCH
Q ss_conf 165553335782213337889999986202696389972544441479999740---6----614651121110
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLT---G----ADCIELYTGPYG 166 (261)
Q Consensus 100 e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~---G----ad~VElhTG~Ya 166 (261)
-..+ .++..+ ....+.+..+.+.+++.||..++-+- |+.. +..+..+ | .-.+.|+-|.|.
T Consensus 115 ~s~n--~~~~~~--~n~~~~~~~~~~~~~~~gi~pe~~~~-d~~~--l~~~~~l~~~g~l~~p~~~~~vlG~~~ 181 (284)
T 3chv_A 115 GSNN--FPSRVY--ENPPDLVDWLAAQMRSYRVTPEIEAF-DLSH--ILRAIDMHGRGLLYGKLYVQFVMGVKN 181 (284)
T ss_dssp SCEE--CSSSEE--CCCHHHHHHHHHHHHHHTCEEEEEES-SHHH--HHHHHHHHHTTCSCSSCEEEEEECCTT
T ss_pred CCCC--CCCCCC--CCCHHHHHHHHHHHHHHCCCCEEEEE-CHHH--HHHHHHHHHCCCCCCCCEEEEEEECCC
T ss_conf 4345--545000--38799999999999984755125787-4999--999999997388678850799981677
No 7
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structural genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=95.80 E-value=0.067 Score=33.07 Aligned_cols=150 Identities=12% Similarity=0.090 Sum_probs=80.0
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEE---ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEE-EEE--
Q ss_conf 5332214432232207886899899999999749989998---2478833488899999887400013674158-883--
Q gi|254780438|r 4 SVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTV---HPRPDQRHIRYTDLPEIRRLIDEQFPKAELN-IEG-- 77 (261)
Q Consensus 4 ~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITv---H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elN-iEg-- 77 (261)
|+||+ --++|+.. =++-++.+.+.++|.+||-+ |+.. --.....++..+++.+..+ ++++- +-.
T Consensus 2 K~~~~---t~sf~~~~----~sl~e~l~~a~~~G~~gIEl~~~~~~~-~~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~ 71 (286)
T 3dx5_A 2 KYSLC---TISFRHQL----ISFTDIVQFAYENGFEGIELWGTHAQN-LYMQEYETTERELNCLKDK--TLEITMISDYL 71 (286)
T ss_dssp EEEEE---GGGGTTSC----CCHHHHHHHHHHTTCCEEEEEHHHHHH-HHHHCHHHHHHHHHHTGGG--TCCEEEEECCC
T ss_pred EEEEE---EHHHCCCC----CCHHHHHHHHHHHCCCEEEECCCCCCC-CCCCCHHHHHHHHHHHHHC--CCEEEEEECCC
T ss_conf 37986---28743689----899999999998199999982556653-4545878899999999965--99799984676
Q ss_pred --CCC----------HHHHHHHHHHCCCEEEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC---
Q ss_conf --485----------68999998507212897101-65553335782213337889999986202696389972544---
Q gi|254780438|r 78 --YPN----------ETFLNLCERYKPEQITLVPD-DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN--- 141 (261)
Q Consensus 78 --~p~----------~e~i~ia~~ikP~qvtLVPe-~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd--- 141 (261)
.+. .++++++....-..+.++|- .+...+++-+|+- -.+.++.+.+...+.|+++.+=--|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~v~~g~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~Gv~l~lE~h~~~~~ 149 (286)
T 3dx5_A 72 DISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQE--YVNRIRMICELFAQHNMYVLLETHPNTLT 149 (286)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHH--HHHHHHHHHHHHHHTTCEEEEECCTTSTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf 6677432899999999999999980989999867988854370999999--99999999988761496899984136155
Q ss_pred -CCCHHHHHHHHCCCCEEEE--CCCCC
Q ss_conf -4414799997406614651--12111
Q gi|254780438|r 142 -GNEHSLQAAKLTGADCIEL--YTGPY 165 (261)
Q Consensus 142 -~~q~~i~~a~~~Gad~VEl--hTG~Y 165 (261)
......+....++.+.+-+ =||.+
T Consensus 150 ~~~~~~~~li~~v~~p~~gl~~D~~h~ 176 (286)
T 3dx5_A 150 DTLPSTLELLGEVDHPNLKINLDFLHI 176 (286)
T ss_dssp SSHHHHHHHHHHHCCTTEEEEEEHHHH
T ss_pred CCHHHHHHHHHHCCCCCEEEECCHHHH
T ss_conf 889999999975223436233147899
No 8
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.53 E-value=0.17 Score=30.24 Aligned_cols=171 Identities=15% Similarity=0.147 Sum_probs=106.7
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHHCCCCCCCEEEEEECCCH--------H---HH---HHHHH
Q ss_conf 89999999974998999824788334888--999998874000136741588834856--------8---99---99985
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRY--TDLPEIRRLIDEQFPKAELNIEGYPNE--------T---FL---NLCER 89 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~--~Dv~~l~~~~~~~~~~~elNiEg~p~~--------e---~i---~ia~~ 89 (261)
=++-|..|.++|||-|-+=-.-+.==.|| ..+..+++.+ ++|.++=.-|.. | |. .++.+
T Consensus 48 s~e~a~~A~~~GAdRIELCs~L~~GGLTPS~gli~~~~~~~-----~iPV~vMIRPR~GdF~Ys~~E~~~M~~dI~~~k~ 122 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-----QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-----CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-----CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999984999998115766689798999999999867-----9975999678888888899999999999999998
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE--EC--CCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 072128971016555333578221333788999998620269638997--25--44441479999740661465112111
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF--AD--GNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF--ID--pd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
..-+-+-+ .-||.||-+|.. .++..+...+.. .+-+- +| +||. ..++...++|+++|== .|--
T Consensus 123 ~Ga~GvVf-----G~L~~dg~ID~~----~~~~Lv~~a~~l--~vTFHRAfD~~~d~~-~ale~Li~lG~~rILT-SGg~ 189 (287)
T 3iwp_A 123 YGADGLVF-----GALTEDGHIDKE----LCMSLMAICRPL--PVTFHRAFDMVHDPM-AALETLLTLGFERVLT-SGCD 189 (287)
T ss_dssp TTCSEEEE-----CCBCTTSCBCHH----HHHHHHHHHTTS--CEEECGGGGGCSCHH-HHHHHHHHHTCSEEEE-CTTS
T ss_pred CCCCEEEE-----EEECCCCCCCHH----HHHHHHHHHCCC--CEEEEEHHHHCCCHH-HHHHHHHHCCCCEEEC-CCCC
T ss_conf 69997899-----556899984999----999999982898--569740056408999-9999999739885676-8885
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEH
Q ss_conf 0244435643366688999876654156235207898987799999736996388425
Q gi|254780438|r 166 GACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVG 223 (261)
Q Consensus 166 a~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIG 223 (261)
..+... ++.|++..+.|. -.+.+=+|-|+|.+|+..+++. ..+.|++.+
T Consensus 190 ~~A~~G-------~~~L~~Lv~~a~-~~I~Im~GGGV~~~Ni~~l~~~-~G~~eiH~S 238 (287)
T 3iwp_A 190 SSALEG-------LPLIKRLIEQAK-GRIVVMPGGGITDRNLQRILEG-SGATEFHCS 238 (287)
T ss_dssp SSTTTT-------HHHHHHHHHHHT-TSSEEEECTTCCTTTHHHHHHH-HCCSEEEEC
T ss_pred CCHHHH-------HHHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHH-CCCCEEEEC
T ss_conf 668886-------899999999738-9946985698898999999997-199189768
No 9
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=95.52 E-value=0.098 Score=31.94 Aligned_cols=123 Identities=20% Similarity=0.235 Sum_probs=77.7
Q ss_pred HHHHHHHHHHCCCCEEEEECC-C-CCCCCCHHHHHH-HHHHHCCCCCCCEEEEEE-----CCCHHHHHHHHHHCCCEEEE
Q ss_conf 899999999749989998247-8-833488899999-887400013674158883-----48568999998507212897
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPR-P-DQRHIRYTDLPE-IRRLIDEQFPKAELNIEG-----YPNETFLNLCERYKPEQITL 97 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R-~-DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg-----~p~~e~i~ia~~ikP~qvtL 97 (261)
+++.|..|.++||.-+-+|.| | |.||..|-+++. +-.-+....+.+ +++=. ...++-+..+...+|+.+.+
T Consensus 34 ia~~a~~c~~AGAsivH~H~Rd~~dG~~s~d~~~y~~ii~~IR~~~~~i-v~~tt~~~~~~~~~~r~~~~~~~~Pd~as~ 112 (311)
T 3e02_A 34 IVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDAI-LNITTGGGLGMSLDERLAPARAARPEVASM 112 (311)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCCE-EEECSSCSTTCCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCE-EEEECCCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 9999999998267389988537999894779999999999999749936-987316777887477776664248752345
Q ss_pred EE-----CCCCCCC--CCCCCC-------------HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 10-----1655533--357822-------------1333788999998620269638997254444147999974
Q gi|254780438|r 98 VP-----DDPHQLT--SDHGWD-------------FLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 98 VP-----e~r~elT--TegGld-------------v~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
-. +.-...+ -...|+ +......+..+...+++.|+++++=+. |+.+ +..+..
T Consensus 113 ~~gs~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~n~~~~~~~~~~~~~~~gi~pe~e~~-d~g~--l~~~~~ 184 (311)
T 3e02_A 113 NMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFECY-DVGH--LYNLAH 184 (311)
T ss_dssp ECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEEC-SHHH--HHHHHH
T ss_pred CCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEE-CHHH--HHHHHH
T ss_conf 44445667411110001113420132214666615328999999999999970872269961-7999--999999
No 10
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=95.43 E-value=0.19 Score=30.02 Aligned_cols=201 Identities=13% Similarity=0.167 Sum_probs=139.4
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998-----24788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV-----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv-----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++=++.+-.+.++++|+|.|-+ |-=|.- -.-++.+..|++.... ...+..|--..-+.+++...+..++.+|
T Consensus 38 D~~~l~~~i~~l~~~g~d~iHiDImDG~FVpn~-t~g~~~i~~ir~~~~~--~~idvHLMv~~P~~~i~~~~~~g~d~I~ 114 (246)
T 3inp_A 38 DLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL-TFGPMVLKALRDYGIT--AGMDVHLMVKPVDALIESFAKAGATSIV 114 (246)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-CCCHHHHHHHHHHTCC--SCEEEEEECSSCHHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHHCCC--CEEEEHHHCCCHHHHHHHHHHCCCCEEE
T ss_conf 899999999999976999899975048537655-5798999999970898--4055210107999999999867997999
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+=+|.-. .+..++..+++.|+++.|=+.|+..-..++.-.. .+|.|=+-|-.-. |...+...
T Consensus 115 ~H~E~~~---------------~~~~~i~~ik~~g~k~Glalnp~T~i~~l~~~l~-~iD~VlvM~V~PG--f~GQ~f~~ 176 (246)
T 3inp_A 115 FHPEASE---------------HIDRSLQLIKSFGIQAGLALNPATGIDCLKYVES-NIDRVLIMSVNPG--FGGQKFIP 176 (246)
T ss_dssp ECGGGCS---------------CHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGG-GCSEEEEECSCTT--C--CCCCT
T ss_pred EECCCCC---------------CHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH-HHCEEEEEECCCC--CCCCHHHH
T ss_conf 8420210---------------8999999999819817999637778999988764-0003567421698--87611457
Q ss_pred HHHHHHHHHHHHHHHCC--CEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66688999876654156--2352078989877999997369963884259999999994099999999999974
Q gi|254780438|r 177 IFLNKLAITAQLAQKMD--LQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lg--L~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
..++|+++..++..+.| +.+-.-=|.|.+|++.+. + -+.+=+-.|=+|... -.++++++++++.+++
T Consensus 177 ~~l~kI~~l~~~~~~~~~~~~I~VDGGIn~~ti~~l~-~-aGad~~V~GSaiF~~---~d~~~~i~~lr~~l~k 245 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIA-V-CGVNAFVAGSAIFNS---DSYKQTIDKMRDELNK 245 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHH-T-TTCCEEEESHHHHTS---SCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH-H-CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHC
T ss_conf 7999999999887524777159997987999999999-8-799999978688689---9999999999999864
No 11
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=95.39 E-value=0.19 Score=29.94 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=107.1
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHHCCCCCCCEEEEEECCCH--------------HHHHHHHHHCC
Q ss_conf 99999974998999824788334888--999998874000136741588834856--------------89999985072
Q gi|254780438|r 29 IGKIALQSGASGLTVHPRPDQRHIRY--TDLPEIRRLIDEQFPKAELNIEGYPNE--------------TFLNLCERYKP 92 (261)
Q Consensus 29 ~a~~~~~~GadgITvH~R~DrRHI~~--~Dv~~l~~~~~~~~~~~elNiEg~p~~--------------e~i~ia~~ikP 92 (261)
-|..|+++|||-|-+=-.-+.=+.++ ..+..+++.+... ++|..+=.-|.. +.++.+.+..-
T Consensus 13 ~~~~A~~~GadRiELc~~l~~GGlTPs~~~i~~~~~~~~~~--~ipV~vMIRPr~g~F~y~~~e~~~m~~dI~~~~~~Ga 90 (224)
T 2bdq_A 13 DLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELES 90 (224)
T ss_dssp TGGGCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCC--CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99999983999899847656689799999999999860337--9986999613899867688999999999999998199
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC---CHHHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 128971016555333578221333788999998620269638997254444---14799997406614651121110244
Q gi|254780438|r 93 EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN---EHSLQAAKLTGADCIELYTGPYGACY 169 (261)
Q Consensus 93 ~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~---q~~i~~a~~~Gad~VElhTG~Ya~a~ 169 (261)
+.+++-. +|.|+-+|.. .++..++.....++-.--=+|.... .+.++....+|++++=+..|+|....
T Consensus 91 dgiVfG~-----L~~d~~id~~----~~~~li~~~~~~~vtfHrA~D~~~~~~~~~~l~~l~~lgv~~iltsGg~~~~~~ 161 (224)
T 2bdq_A 91 DALVLGI-----LTSNNHIDTE----AIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGEPI 161 (224)
T ss_dssp SEEEECC-----BCTTSSBCHH----HHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCCCG
T ss_pred CCEEEEE-----ECCCCCCCHH----HHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 8027987-----7677771599----999999980899805626756555653999999999669853244588654349
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 435643366688999876654156235207898987799999736996388425999
Q gi|254780438|r 170 NNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 170 ~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
.++ +..+++..+.+. .++.+-+|=|+|.+|+..++++ -...|++ |-++
T Consensus 162 ~~~------i~~L~~l~~~~~-~~i~I~vgGGI~~~Ni~~l~~~-~g~~~~H-gsai 209 (224)
T 2bdq_A 162 IEN------IKHIKALVEYAN-NRIEIMVGGGVTAENYQYICQE-TGVKQAH-GTRI 209 (224)
T ss_dssp GGG------HHHHHHHHHHHT-TSSEEEECSSCCTTTHHHHHHH-HTCCEEE-ETTC
T ss_pred HHH------HHHHHHHHHHCC-CCCEEEECCCCCHHHHHHHHHH-HCCCEEE-EEEE
T ss_conf 999------999999999609-9918997799799999999996-5992898-7103
No 12
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=95.38 E-value=0.065 Score=33.19 Aligned_cols=123 Identities=18% Similarity=0.169 Sum_probs=77.1
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHH-HHHHHCCCCCCCEEEEEEC-------CCHHHHHHHHHHCCCEE
Q ss_conf 8999999997499899982478--833488899999-8874000136741588834-------85689999985072128
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPE-IRRLIDEQFPKAELNIEGY-------PNETFLNLCERYKPEQI 95 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg~-------p~~e~i~ia~~ikP~qv 95 (261)
+++.|..|.++||.-+-+|.|. |.+|..|-+++. +-.-+... .+.-+|+-.. +.++-++.+...+|+.+
T Consensus 34 ia~~A~~c~~AGAaivHlH~Rd~~dG~~s~d~~~y~eii~~iR~~-~d~ii~~tt~~~~~~~~~~~~r~~~~~~~~Pd~a 112 (314)
T 3lot_A 34 IVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPALKPEIA 112 (314)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHHHCCSEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 999999999826528998734777798478999999999999865-9958999567776544466778888876386656
Q ss_pred EEEECCCCCCC-------CCCCC-------------CHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 97101655533-------35782-------------21333788999998620269638997254444147999974
Q gi|254780438|r 96 TLVPDDPHQLT-------SDHGW-------------DFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 96 tLVPe~r~elT-------TegGl-------------dv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
++-.-..+--+ .++.| -+......+..+...+++.|+++.+=+- |+.. +..+..
T Consensus 113 s~~~g~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~e~Gi~pe~e~y-d~g~--l~~~~~ 186 (314)
T 3lot_A 113 TFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELECY-DIGQ--IYNTAF 186 (314)
T ss_dssp EEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEEC-SHHH--HHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEE-CHHH--HHHHHH
T ss_conf 4001465555421232100011234621103455503308999999999999970975169983-6999--999999
No 13
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose phosphate pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.26 E-value=0.2 Score=29.86 Aligned_cols=198 Identities=11% Similarity=0.111 Sum_probs=128.0
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998-----24788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV-----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv-----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++=++.+....+.++|+|-|-+ |-=|.- -..+.-+..+++... ...+..|=...-..+++-..+..++.+|
T Consensus 21 d~~~l~~~l~~l~~~g~d~iHiDimDg~Fvpn~-~~~~~~i~~i~~~t~---~~idvHLMv~~P~~~i~~~~~~g~d~i~ 96 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-TIGPLVVDSLRPITD---LPLDVHLMIVEPDQRVPDFIKAGADIVS 96 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-CCCHHHHHHHGGGCC---SCEEEEEESSSHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHCCC---CCCEEEEEEECHHHHHHHHHHHCCCEEE
T ss_conf 999999999999975999899968879827766-638789999874179---8752699996578769999871895367
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+-.|.-+.. .+..++..+++.|+++.|=+.|+..-..++.-.+ -+|.|=+-|-.- -|...+...
T Consensus 97 ~H~E~~~~~-------------~~~~~i~~ik~~g~k~Glal~p~T~~~~i~~~l~-~vD~VlvMtV~P--Gf~GQ~f~~ 160 (230)
T 1rpx_A 97 VHCEQSSTI-------------HLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLD-AVDLVLIMSVNP--GFGGQSFIE 160 (230)
T ss_dssp EECSTTTCS-------------CHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTT-TCSEEEEESSCT--TCSSCCCCT
T ss_pred EECCCCCCC-------------CHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH-HCCEEEEEEECC--CCCCCCCCH
T ss_conf 513334422-------------6999999999879869999689999899999986-579899988768--987544468
Q ss_pred HHHHHHHHHHHHHHHC--CCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6668899987665415--6235207898987799999736996388425999999999409999999999
Q gi|254780438|r 177 IFLNKLAITAQLAQKM--DLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRR 244 (261)
Q Consensus 177 ~el~~i~~aa~~A~~l--gL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ 244 (261)
.-++++++..++-.+. ...+-.-=|.|.+|++.+. . -+.+-+-.|-+|... -...+++.+++.
T Consensus 161 ~~l~kI~~~~~~~~~~~~~~~I~VDGGIn~~~i~~l~-~-~Gad~~V~GS~if~~---~d~~~~i~~lk~ 225 (230)
T 1rpx_A 161 SQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVI-E-AGANALVAGSAVFGA---PDYAEAIKGIKT 225 (230)
T ss_dssp THHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHH-H-HTCCEEEESHHHHTS---SCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-H-CCCCEEEECHHHHCC---CCHHHHHHHHHH
T ss_conf 8999999999999865993589998887889999999-8-699999978688689---999999999997
No 14
>3e49_A Uncharacterized protein DUF849 with A TIM barrel fold; YP_556190.1; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=95.22 E-value=0.074 Score=32.79 Aligned_cols=136 Identities=18% Similarity=0.163 Sum_probs=82.7
Q ss_pred HHHHHHHHHHCCCCEEEEECCC--CCCCCCHHHHHH-HHHHHCCCCCCCEEEEEEC-----CCHHHHHHHHHHCCCEEEE
Q ss_conf 8999999997499899982478--833488899999-8874000136741588834-----8568999998507212897
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP--DQRHIRYTDLPE-IRRLIDEQFPKAELNIEGY-----PNETFLNLCERYKPEQITL 97 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~--DrRHI~~~Dv~~-l~~~~~~~~~~~elNiEg~-----p~~e~i~ia~~ikP~qvtL 97 (261)
+++.|..|.++||.-+-+|.|. |.+|..|-+++. +-.-+....+ .-+|+-.. ..++-+..+...+|+++.+
T Consensus 34 ia~~a~~c~~AGAsivHlH~Rd~~dG~~s~d~~~y~~ii~~ir~~~~-~iv~~tt~~~~~~~~e~r~~~~~~~~Pd~asl 112 (311)
T 3e49_A 34 VAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD-AVINLTTGGSPHMTVEERLRPATHYMPELASL 112 (311)
T ss_dssp HHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC-CEEEECSCSCTTSCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC-CEEEECCCCCCCCCHHHHHHHHHHHHHCEEEE
T ss_conf 99999999982652799764577789917899999999999997599-53774456777788888888999862221220
Q ss_pred EECCC---------CCCCCCCCCC-----------HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH---HCC
Q ss_conf 10165---------5533357822-----------133378899999862026963899725444414799997---406
Q gi|254780438|r 98 VPDDP---------HQLTSDHGWD-----------FLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAK---LTG 154 (261)
Q Consensus 98 VPe~r---------~elTTegGld-----------v~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~---~~G 154 (261)
=+=.- ...--..||. +......+..+.+.+++.|+++++=+- |+.+ +..+. +-|
T Consensus 113 ~~gs~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~n~~~~~~~~~~~~~e~gv~pe~eif-d~g~--l~~~~~~~~~g 189 (311)
T 3e49_A 113 NMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECY-DTSH--LYNLAHFVDRK 189 (311)
T ss_dssp ECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEEC-SHHH--HHHHHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEEE-CHHH--HHHHHHHHHCC
T ss_conf 01566655443554321104454354440456605329999999999999973986049996-5899--99999998658
Q ss_pred ----CCEEEECCCCC
Q ss_conf ----61465112111
Q gi|254780438|r 155 ----ADCIELYTGPY 165 (261)
Q Consensus 155 ----ad~VElhTG~Y 165 (261)
.-.+-+.-|.+
T Consensus 190 ~l~~p~~~~~vlg~~ 204 (311)
T 3e49_A 190 LATPPFFVQTVFGLL 204 (311)
T ss_dssp CSCSSEEEEEEESCT
T ss_pred CCCCCCEEEEEEECC
T ss_conf 889986699998557
No 15
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=95.11 E-value=0.23 Score=29.36 Aligned_cols=199 Identities=11% Similarity=0.119 Sum_probs=131.2
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998-----24788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV-----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv-----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++=++.+..+.++++|+|-|-+ |-=|.- -.-+.-+..+++... + ..++.|-...-..+++...+..++.+|
T Consensus 14 d~~~l~~~i~~l~~~g~d~iHvDimDg~Fvpn~-t~g~~~i~~i~~~t~--~-~~dvHLMv~~P~~~i~~~~~~g~d~I~ 89 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDIMDGQFVPNI-SFGADVVASMRKHSK--L-VFDCHLMVVDPERYVEAFAQAGADIMT 89 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB-CBCHHHHHHHHTTCC--S-EEEEEEESSSGGGGHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHCCC--C-CEEEEEECCCHHHHHHHHHHCCCCEEE
T ss_conf 989999999999975999999967048368754-749999998863689--7-679998517988889999865997899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+=+|.-.. +..+++.+++.|+++.+=+.|+.....++.-.+ -+|.|=+=|-.-. |...+...
T Consensus 90 ~H~E~~~~---------------~~~~i~~i~~~g~~~Glal~p~T~~~~~~~~l~-~vd~vlvM~V~pG--~~Gq~f~~ 151 (220)
T 2fli_A 90 IHTESTRH---------------IHGALQKIKAAGMKAGVVINPGTPATALEPLLD-LVDQVLIMTVNPG--FGGQAFIP 151 (220)
T ss_dssp EEGGGCSC---------------HHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTT-TCSEEEEESSCTT--CSSCCCCG
T ss_pred ECHHHHCC---------------HHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH-HCCEEEEEEECCC--CCCCCCCH
T ss_conf 53233208---------------899999998769869999648764036661675-5087989887566--46655540
Q ss_pred HHHHHHHHHHHHHHHC--CCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6668899987665415--6235207898987799999736996388425999999999409999999999997
Q gi|254780438|r 177 IFLNKLAITAQLAQKM--DLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 177 ~el~~i~~aa~~A~~l--gL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~ 247 (261)
..++|+++..++..+. ++.+-+-=|.|.+|++.+.+ -+.+-+-.|-+|... -.+.++|++++..++
T Consensus 152 ~~~~ki~~l~~~~~~~~~~~~I~vDGGin~~~i~~l~~--~Gad~~V~GS~if~~---~d~~~~i~~Lr~~l~ 219 (220)
T 2fli_A 152 ECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYE--AGANVFVAGSYLFKA---SDLVSQVQTLRTALN 219 (220)
T ss_dssp GGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHH--HTCCEEEESHHHHTS---SCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHHC
T ss_conf 57899999999997529970699846778887999998--799999978588689---999999999999747
No 16
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=95.06 E-value=0.11 Score=31.59 Aligned_cols=87 Identities=11% Similarity=0.087 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 82213337889999986202696389972544441479999740661465112111024443564336668899987665
Q gi|254780438|r 110 GWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLA 189 (261)
Q Consensus 110 Gldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A 189 (261)
|.+.......+...++.+++.++.++..+.+- +...++..++.|++++-+.-+.+.....+.-.....++...++.+.|
T Consensus 109 g~~~~~~~~~~~~~i~~i~~~~~~i~~~~g~~-~~e~l~~L~~aG~~~~~~~~et~~~~~~~~i~~~~~~~~~~~~i~~~ 187 (348)
T 3iix_A 109 GEDPYXMPDVISDIVKEIKKMGVAVTLSLGEW-PREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTL 187 (348)
T ss_dssp SCCGGGTTHHHHHHHHHHHTTSCEEEEECCCC-CHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC-HHHHHHHHHHHCCCEEEECHHHCCHHHEEECCCCCCCCHHHHHHHHH
T ss_conf 88876648999999874033321232024543-08999999982896798563443402122011477731246776677
Q ss_pred HHCCCEEE
Q ss_conf 41562352
Q gi|254780438|r 190 QKMDLQIN 197 (261)
Q Consensus 190 ~~lgL~Vn 197 (261)
++.|+.++
T Consensus 188 ~~~Gi~v~ 195 (348)
T 3iix_A 188 KELGYETG 195 (348)
T ss_dssp HHTTCEEE
T ss_pred HHCCCEEE
T ss_conf 62497278
No 17
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=95.06 E-value=0.11 Score=31.66 Aligned_cols=164 Identities=15% Similarity=0.165 Sum_probs=106.2
Q ss_pred CCCCCCHHHHHHHHCCCCCCC--------CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 533221443223220788689--------989999999974998999824788334888999998874000136741588
Q gi|254780438|r 4 SVSVNLNAVAVLRNRRNLPWP--------NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNI 75 (261)
Q Consensus 4 ~LsVNidhiAtLRnaRg~~~P--------~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNi 75 (261)
.++...+.+..+|+- .+.| +|........++|||-||+|..-.. + -.+.+..+++ . +.+.-+
T Consensus 45 n~t~g~~~i~~i~~~--t~~~~dvHLMv~~P~~~i~~~~~~g~d~I~~H~E~~~-~-~~~~i~~i~~----~--g~~~Gl 114 (220)
T 2fli_A 45 NISFGADVVASMRKH--SKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTR-H-IHGALQKIKA----A--GMKAGV 114 (220)
T ss_dssp CBCBCHHHHHHHHTT--CCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCS-C-HHHHHHHHHH----T--TSEEEE
T ss_pred CCCCCHHHHHHHHHC--CCCCEEEEEECCCHHHHHHHHHHCCCCEEEECHHHHC-C-HHHHHHHHHH----C--CCEEEE
T ss_conf 547499999988636--8976799985179888899998659978995323320-8-8999999987----6--986999
Q ss_pred EECCCHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC
Q ss_conf 834856899999850-721289710165553335782213-337889999986202696389972544441479999740
Q gi|254780438|r 76 EGYPNETFLNLCERY-KPEQITLVPDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLT 153 (261)
Q Consensus 76 Eg~p~~e~i~ia~~i-kP~qvtLVPe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~ 153 (261)
-.+|...+-.+..-. .-++|.+.--.|+ -+|..+. ...++++...+.+.+.+..+.+-+|-..+...+....+.
T Consensus 115 al~p~T~~~~~~~~l~~vd~vlvM~V~pG----~~Gq~f~~~~~~ki~~l~~~~~~~~~~~~I~vDGGin~~~i~~l~~~ 190 (220)
T 2fli_A 115 VINPGTPATALEPLLDLVDQVLIMTVNPG----FGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEA 190 (220)
T ss_dssp EECTTSCGGGGGGGTTTCSEEEEESSCTT----CSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCEEEEEEECCC----CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHC
T ss_conf 96487640366616755087989887566----46655540578999999999975299706998467788879999987
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 661465112111024443564336668899987
Q gi|254780438|r 154 GADCIELYTGPYGACYNNPQQERIFLNKLAITA 186 (261)
Q Consensus 154 Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa 186 (261)
|||.+=.=++ .|+.+. ....+.+++.+.
T Consensus 191 Gad~~V~GS~----if~~~d-~~~~i~~Lr~~l 218 (220)
T 2fli_A 191 GANVFVAGSY----LFKASD-LVSQVQTLRTAL 218 (220)
T ss_dssp TCCEEEESHH----HHTSSC-HHHHHHHHHHHH
T ss_pred CCCEEEECHH----HHCCCC-HHHHHHHHHHHH
T ss_conf 9999997858----868999-999999999974
No 18
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp}
Probab=95.03 E-value=0.24 Score=29.22 Aligned_cols=186 Identities=15% Similarity=0.085 Sum_probs=121.7
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC------CCEEEEEECCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 9999999974998999824788334888999998874000136------7415888348568999998507212897101
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFP------KAELNIEGYPNETFLNLCERYKPEQITLVPD 100 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~------~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe 100 (261)
...|+-+..+||.+|.+ -..+|+..+++.+..... ...+.+.+.++.+..+.+....-+.+.+-..
T Consensus 39 ~a~A~a~~~gGa~~i~~--------~~~~~l~~ir~~~~~pv~~l~k~~~~~~~~~~~~~~~~~~~~~~~gad~i~~~~~ 110 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRI--------EGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGT 110 (232)
T ss_dssp HHHHHHHHHTTCSEEEE--------ESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHHCCCEEEEC--------CCHHHHHHHHHHCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHCCCCEEEEECC
T ss_conf 99999999789879955--------9999999999855761775662046788444255899998888739999999723
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 65553335782213337889999986202696389972544441479999740661465112111024443564336668
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLN 180 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~ 180 (261)
.+... ..+...+...++.|+.+-.-+.. ++ ..+.+.++|+|.|-...+.+...- .......++
T Consensus 111 ~~~~~------------~~~~~~~~~~~~~g~~v~~~v~t-~~--~a~~a~~~Gad~Igv~~~~~~~~~-~~~~~~~~l- 173 (232)
T 3igs_A 111 ARQRP------------VAVEALLARIHHHHLLTMADCSS-VD--DGLACQRLGADIIGTTMSGYTTPD-TPEEPDLPL- 173 (232)
T ss_dssp SSCCS------------SCHHHHHHHHHHTTCEEEEECCS-HH--HHHHHHHTTCSEEECTTTTSSSSS-CCSSCCHHH-
T ss_pred CCCCH------------HHHHHHHHHHHHCCCEEEEECCC-HH--HHHHHHHCCCCEEEEECCCCCCCC-CCCHHHHHH-
T ss_conf 48997------------89999999997549869998699-99--999999689988997357787787-670367889-
Q ss_pred HHHHHHHHHHHCCCEEEECCCCC-HHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89998766541562352078989-87799999736996388425999999999409999999999997410
Q gi|254780438|r 181 KLAITAQLAQKMDLQINAGHDLT-IQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 181 ~i~~aa~~A~~lgL~VnAGHgLn-~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
.+.....++-|-|+=|.. -+++..+++ . +-+=|-||-+|. .-++..++|.+.+++..
T Consensus 174 -----~~~~~~~~ipvia~GGI~t~~d~~~~~~-~-GAd~V~vGsAi~------~~~~i~~~~~~ai~~~~ 231 (232)
T 3igs_A 174 -----VKALHDAGCRVIAEGRYNSPALAAEAIR-Y-GAWAVTVGSAIT------RLEHICGWYNDALKKAA 231 (232)
T ss_dssp -----HHHHHHTTCCEEEESCCCSHHHHHHHHH-T-TCSEEEECHHHH------CHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHCCCCEEEEECCCCCHHHHHHHHH-C-CCCEEEECHHHC------CHHHHHHHHHHHHHHHC
T ss_conf -----9997337823998589899999999998-6-999999894775------90999999999999741
No 19
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif, structural genomics; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=94.98 E-value=0.24 Score=29.30 Aligned_cols=188 Identities=10% Similarity=0.025 Sum_probs=105.8
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCC-----CCCHHHHHHHHHHHCCCCCCCEEEEEE------------CCC------
Q ss_conf 998999999997499899982478833-----488899999887400013674158883------------485------
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQR-----HIRYTDLPEIRRLIDEQFPKAELNIEG------------YPN------ 80 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~DrR-----HI~~~Dv~~l~~~~~~~~~~~elNiEg------------~p~------ 80 (261)
-+..+....+.++|-|+|-+.+.+..- =..+.++..+++.+... .+.+.+ .++
T Consensus 30 l~~~e~l~~a~~~Gfd~iEl~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----gl~i~~~~~~~~~~~~l~s~d~~~r~~ 105 (295)
T 3cqj_A 30 ECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVET----GVRVPSMCLSAHRRFPLGSEDDAVRAQ 105 (295)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHH----CCEEEEEEEGGGGTSCTTCSSHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHC----CCEEEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 8999999999982999899960575221134679999999999999982----994689752534479999969999999
Q ss_pred -----HHHHHHHHHHCCCEEEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC----CHHHHHH
Q ss_conf -----689999985072128971016-555333578221333788999998620269638997254444----1479999
Q gi|254780438|r 81 -----ETFLNLCERYKPEQITLVPDD-PHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN----EHSLQAA 150 (261)
Q Consensus 81 -----~e~i~ia~~ikP~qvtLVPe~-r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~----q~~i~~a 150 (261)
.+.+++|..+....+++.|-. +.+.+.+..|+. -.+.|+.......+.||++++=-.+++- +..++..
T Consensus 106 ~~~~l~~~i~~a~~lG~~~i~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~A~~~gi~lalE~~~~~~~~~~~~~~~li 183 (295)
T 3cqj_A 106 GLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRR--FRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYA 183 (295)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHH--HHHHHHHHHHHHHHHTCEEEEECCSSGGGCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHH
T ss_conf 999999999999972998899778888767784999999--999999999998753748888630243459988977888
Q ss_pred HHCCCCEEEE--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------EEEECC-CCCHHHHHHHHHHCCCCE
Q ss_conf 7406614651--1211102444356433666889998766541562---------352078-989877999997369963
Q gi|254780438|r 151 KLTGADCIEL--YTGPYGACYNNPQQERIFLNKLAITAQLAQKMDL---------QINAGH-DLTIQNIPNLINAIPYIS 218 (261)
Q Consensus 151 ~~~Gad~VEl--hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL---------~VnAGH-gLn~~Nl~~~i~~Ip~I~ 218 (261)
.+++.+.+-+ =||.+... +......+.. ...+....-+ .+--|- .++|..+-..+.++.+=-
T Consensus 184 ~~v~~p~~gl~~D~~h~~~~---g~~~~~~~~~---~~~~i~~vHikD~~~~~~~~~~~G~G~id~~~~~~~L~~~gy~G 257 (295)
T 3cqj_A 184 HYLNNPWFQLYPDIGNLSAW---DNDVQMELQA---GIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCG 257 (295)
T ss_dssp HHHCCTTEEEECBHHHHHSS---SCCHHHHHHH---TGGGBCCEEECEEETTEEEEECTTSSSCCHHHHHHHHHHTTCCS
T ss_pred HHHCCCCCCCCCCHHHHHHH---CCCHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 86346565421465899886---1689999976---14610068730168984353589984619999999999969971
Q ss_pred EEEEH
Q ss_conf 88425
Q gi|254780438|r 219 EISVG 223 (261)
Q Consensus 219 EvsIG 223 (261)
-+++=
T Consensus 258 ~~~~E 262 (295)
T 3cqj_A 258 PYLIE 262 (295)
T ss_dssp CEEEC
T ss_pred EEEEE
T ss_conf 79997
No 20
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, structural genomics, center for structural genomics of infectious diseases; 2.05A {Francisella tularensis subsp}
Probab=94.84 E-value=0.21 Score=29.62 Aligned_cols=164 Identities=13% Similarity=0.189 Sum_probs=103.7
Q ss_pred CCCCCCHHHHHHHHCCCCCCC--------CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 533221443223220788689--------989999999974998999824788334888999998874000136741588
Q gi|254780438|r 4 SVSVNLNAVAVLRNRRNLPWP--------NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNI 75 (261)
Q Consensus 4 ~LsVNidhiAtLRnaRg~~~P--------~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNi 75 (261)
+++...+-|..||.- +...| +|..+.....++|||.||+|...-. |+..+-+.+.+. +...-+
T Consensus 69 n~t~g~~~i~~ir~~-~~~~~idvHLMv~~P~~~i~~~~~~g~d~I~~H~E~~~------~~~~~i~~ik~~--g~k~Gl 139 (246)
T 3inp_A 69 NLTFGPMVLKALRDY-GITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASE------HIDRSLQLIKSF--GIQAGL 139 (246)
T ss_dssp CBCCCHHHHHHHHHH-TCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCS------CHHHHHHHHHTT--TSEEEE
T ss_pred CCCCCHHHHHHHHHH-CCCCEEEEHHHCCCHHHHHHHHHHCCCCEEEEECCCCC------CHHHHHHHHHHC--CCEEEE
T ss_conf 555798999999970-89840552101079999999998679979998420210------899999999981--981799
Q ss_pred EECCCHHHHHHHHHH--CCCEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 834856899999850--721289710165553335782213-33788999998620269638997254444147999974
Q gi|254780438|r 76 EGYPNETFLNLCERY--KPEQITLVPDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 76 Eg~p~~e~i~ia~~i--kP~qvtLVPe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
-.+|...+-.+ ..+ ..++|.+.--.|+- +|..+. .-.++++...+.+.+.+-.+.+-||-..+...+...++
T Consensus 140 alnp~T~i~~l-~~~l~~iD~VlvM~V~PGf----~GQ~f~~~~l~kI~~l~~~~~~~~~~~~I~VDGGIn~~ti~~l~~ 214 (246)
T 3inp_A 140 ALNPATGIDCL-KYVESNIDRVLIMSVNPGF----GGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAV 214 (246)
T ss_dssp EECTTCCSGGG-TTTGGGCSEEEEECSCTTC------CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHT
T ss_pred EECCCCCHHHH-HHHHHHHCEEEEEECCCCC----CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 96377789999-8876400035674216988----761145779999999998875247771599979879999999998
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 0661465112111024443564336668899987
Q gi|254780438|r 153 TGADCIELYTGPYGACYNNPQQERIFLNKLAITA 186 (261)
Q Consensus 153 ~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa 186 (261)
.|||.+=. |.| .|+.+. .+..+.+++.+.
T Consensus 215 aGad~~V~--GSa--iF~~~d-~~~~i~~lr~~l 243 (246)
T 3inp_A 215 CGVNAFVA--GSA--IFNSDS-YKQTIDKMRDEL 243 (246)
T ss_dssp TTCCEEEE--SHH--HHTSSC-HHHHHHHHHHHH
T ss_pred CCCCEEEE--CHH--HHCCCC-HHHHHHHHHHHH
T ss_conf 79999997--868--868999-999999999998
No 21
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.70 E-value=0.17 Score=30.29 Aligned_cols=194 Identities=10% Similarity=0.069 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH-HHHHHHHHCCCEEEEE
Q ss_conf 689989999999974--9989998247883348889999988740001367415888348568-9999985072128971
Q gi|254780438|r 22 PWPNLVHIGKIALQS--GASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET-FLNLCERYKPEQITLV 98 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~--GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e-~i~ia~~ikP~qvtLV 98 (261)
|.+++-++.+++.+. .+++|-+|..-=.+- -.+-+..|++.... ..+-+.+-++-.++ +.+.+.+..++.+|+=
T Consensus 8 D~~~~~~~l~~~~~~~~~v~~iKig~~l~~~~-G~~~i~~l~~~~~~--~~i~~D~k~~di~~t~~~~~~~~gad~itvH 84 (207)
T 3ajx_A 8 DLLSTEAALELAGKVAEYVDIIELGTPLIKAE-GLSVITAVKKAHPD--KIVFADMKTMDAGELEADIAFKAGADLVTVL 84 (207)
T ss_dssp CCSCHHHHHHHHHHHGGGCSEEEECHHHHHHH-CTHHHHHHHHHSTT--SEEEEEEEECSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECHHHHHHC-CHHHHHHHHHHCCC--CEEECCCCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 79999999999997088678999554998855-99999999873799--4640112121597689999998199999985
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 016555333578221333788999998620269638997254444-1479999740661465112111024443564336
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN-EHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~-q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
++ +| .+.++..++..++.|+.+-+-+-+..+ ....+...++|.+.+..|.|.-.... ...
T Consensus 85 ~~--------~g------~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 145 (207)
T 3ajx_A 85 GS--------AD------DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVRALGAKFVEMHAGLDEQAK-----PGF 145 (207)
T ss_dssp TT--------SC------HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHTTCSEEEEECCHHHHTS-----TTC
T ss_pred HH--------HC------HHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC-----CCC
T ss_conf 54--------24------456999999999729837999358999799999999723979998035554545-----631
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66889998766541562352078989877999997369963884259999999994099999999999
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRA 245 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~i 245 (261)
.++++..... ...+.+-.+=|.+..|...++. -+-+=+=+|-+|..- ---.+++++|++.
T Consensus 146 ~~~~~~~~~~---~~~~~~~v~gGi~~~~~~~a~~--~GaD~iVvGr~I~~a---~dP~~~~~~i~~~ 205 (207)
T 3ajx_A 146 DLNGLLAAGE---KARVPFSVAGGVKVATIPAVQK--AGAEVAVAGGAIYGA---ADPAAAAKELRAA 205 (207)
T ss_dssp CTHHHHHHHH---HHTSCEEEESSCCGGGHHHHHH--TTCSEEEESHHHHTS---SSHHHHHHHHHHT
T ss_pred HHHHHHHHHH---CCCCCEEECCCCCCCCHHHHHH--CCCCEEEECHHHCCC---CCHHHHHHHHHHH
T ss_conf 3889999986---0377677897988158999998--597999986466189---9999999999997
No 22
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=94.36 E-value=0.16 Score=30.54 Aligned_cols=204 Identities=15% Similarity=0.117 Sum_probs=125.0
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEEC-----CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 689989999999974998999824-----788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHP-----RPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~-----R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++=++.+....++++|+|.|-+-. =|.- -.-+..+..+++... ..+++.|-..--+.+++...+..++.+|
T Consensus 15 d~~~l~~~i~~l~~~g~d~iHiDImDG~Fvpn~-~~~~~~i~~i~~~t~---~~idvHLMv~~P~~~i~~~~~~g~~~i~ 90 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNI-TIGPLIVDAIRPLTK---KTLDVHLMIVEPEKYVEDFAKAGADIIS 90 (230)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB-CBCHHHHHHHGGGCC---SEEEEEEESSSGGGTHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHCCC---CCCEEEEEEECHHHHHHHHHHCCCCEEE
T ss_conf 989999999999976999899968879767754-659999999875268---8625789874789999999864897899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+-.|.-.. ..+..++..+++.|+++.|=+.|+.....++.-.+ -.|.|=+=|-.- -|...+...
T Consensus 91 ~H~E~~~~-------------~~~~~~i~~ik~~g~k~Glal~p~T~i~~i~~~l~-~~d~vliM~V~P--Gf~GQ~f~~ 154 (230)
T 1tqj_A 91 VHVEHNAS-------------PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLP-VCDLILIMSVNP--GFGGQSFIP 154 (230)
T ss_dssp EECSTTTC-------------TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGG-GCSEEEEESSCC------CCCCG
T ss_pred EECCCCCC-------------HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEEECC--CCCCCCCCC
T ss_conf 82454556-------------46899999999869918999779998799999865-368699998547--878765560
Q ss_pred HHHHHHHHHHHHHHHCC--CEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66688999876654156--235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 177 IFLNKLAITAQLAQKMD--LQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lg--L~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
..++++++..++..+.| +.+-.-=|.|.+|++.+.+ -+.+-+-.|=+|... --.++++..+++..+..+
T Consensus 155 ~~~~kI~~~~~~~~~~~~~~~I~VDGGIn~~~i~~l~~--~Gad~~V~GS~if~~---~d~~~~i~~lr~~~~~~~ 225 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLE--AGANAIVAGSAVFNA---PNYAEAIAGVRNSKRPEP 225 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHH--HTCCEEEESHHHHTS---SCHHHHHHHHHTCCC---
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHCCCHH
T ss_conf 26899999999972359970699978888999999998--699999978688489---999999999998571005
No 23
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} PDB: 3exs_A* 3ext_A
Probab=93.85 E-value=0.2 Score=29.76 Aligned_cols=203 Identities=10% Similarity=-0.012 Sum_probs=122.0
Q ss_pred CCCCHHHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH-HHHHHHHHCCCEEEEE
Q ss_conf 689989999999974--9989998247883348889999988740001367415888348568-9999985072128971
Q gi|254780438|r 22 PWPNLVHIGKIALQS--GASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET-FLNLCERYKPEQITLV 98 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~--GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e-~i~ia~~ikP~qvtLV 98 (261)
|++|+-++.+++.+. .+|.+-+|.-.-.+.= .+-+..|++.... ..+-+.+-.+-.++ +.+.+.+...+.+|+-
T Consensus 13 D~~~~~~~~~~~~~~~~~vd~ik~g~~~~~~~G-~~~i~~l~~~~~~--~~i~~DlK~~Dip~t~~~~~~~~gad~itvh 89 (221)
T 3exr_A 13 DHSNLKGAITAAVSVGNEVDVIEAGTVCLLQVG-SELVEVLRSLFPD--KIIVADTKCADAGGTVAKNNAVRGADWMTCI 89 (221)
T ss_dssp CCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHC-THHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHTTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCCCEEECCEECHHHCC-HHHHHHHHHHCCC--CEEEEEEEEECCCHHHHHHHHHHCCCEEEEC
T ss_conf 679999999999971887439980545155259-9999999986899--7079876751482057899987169899980
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
++. | ....+...+.+..++..+..+-+-+-+...........+.+.+.+-+|++.-+-. ........+
T Consensus 90 ~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 157 (221)
T 3exr_A 90 CSA--------T---IPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALL-AGETWGEKD 157 (221)
T ss_dssp TTS--------C---HHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHH-HTCCCCHHH
T ss_pred HHH--------H---HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCC-CCCCCCHHH
T ss_conf 411--------3---8899999999997400263789872689999999998854633598764265665-677679999
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6889998766541562352078989877999997369963884259999999994099999999999974
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
++++++.. ..+..|-+.-|.+++|+..++ + -+.+=+-+|-+|.. | ---.+++++|++.+++
T Consensus 158 ~~~vr~~~----~~~~~I~v~GGi~~~~~~~~~-~-~Gad~iVVGraI~~-a--~dP~~~~~~~~~~i~~ 218 (221)
T 3exr_A 158 LNKVKKLI----EMGFRVSVTGGLSVDTLKLFE-G-VDVFTFIAGRGITE-A--KNPAGAARAFKDEIKR 218 (221)
T ss_dssp HHHHHHHH----HHTCEEEEESSCCGGGGGGGT-T-CCCSEEEECHHHHT-S--SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----CCCCEEEECCCCCCCCHHHHH-H-CCCCEEEECCHHCC-C--CCHHHHHHHHHHHHHH
T ss_conf 99999974----369706557986847899999-8-69899998814317-9--9999999999999999
No 24
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=93.77 E-value=0.45 Score=27.36 Aligned_cols=204 Identities=13% Similarity=0.114 Sum_probs=129.6
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998-----24788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV-----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv-----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++-++-+....+ +.|+|.|-+ |-=|. =-+-+..+..+++... ...++.+=...-+.+++...+..++.+|
T Consensus 11 d~~~l~~~i~~l-~~~~d~iHiDImDG~Fvpn-~t~g~~~v~~i~~~t~---~~~dvHLMv~~P~~~i~~~~~~ga~~i~ 85 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPN-LTLSPFFVSQVKKLAT---KPLDCHLMVTRPQDYIAQLARAGADFIT 85 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEEEECSSSSSC-CCBCHHHHHHHHTTCC---SCEEEEEESSCGGGTHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHH-HCCCCEEEEECCCCCCCCC-CCCCHHHHHHHHHCCC---CCEEEEEEECCHHHHHHHHHHCCCCEEE
T ss_conf 999999999998-6799999997767874764-4549999999874579---8558999966888999999866998799
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+-.|.-+ +....+++.+++.|+++.|-+.|+..-..++.-.+. +|.|-+-|-.-. |...+...
T Consensus 86 ~H~Ea~~--------------~~~~~~i~~i~~~g~~~Gialnp~T~~~~i~~~l~~-~D~vl~M~V~pG--~~Gq~f~~ 148 (231)
T 3ctl_A 86 LHPETIN--------------GQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHK-ADKITVMTVDPG--FAGQPFIP 148 (231)
T ss_dssp ECGGGCT--------------TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGG-CSEEEEESSCTT--CSSCCCCT
T ss_pred EEHHHHC--------------CCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCC-CCEEEEEEECCC--CCCCCCHH
T ss_conf 6325430--------------359999999997798799995699970565523133-288999577688--78753258
Q ss_pred HHHHHHHHHHHHHHHC--CCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6668899987665415--623520789898779999973699638842599-99999994099999999999974105
Q gi|254780438|r 177 IFLNKLAITAQLAQKM--DLQINAGHDLTIQNIPNLINAIPYISEISVGHA-FAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 177 ~el~~i~~aa~~A~~l--gL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHa-iIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
.-++|+++..++..+. .+.+-.-=|+|.+|++.+++ -+.+-+-.|-| |... --.++++++.+++.+.+++.
T Consensus 149 ~~l~ki~~l~~~~~~~~~~~~I~VDGGIn~e~i~~l~~--aGad~~V~Gss~iF~~--~~~~~~~~~~l~~~i~~a~~ 222 (231)
T 3ctl_A 149 EMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMA--AGADVFIVGTSGLFNH--AENIDEAWRIMTAQILAAKS 222 (231)
T ss_dssp THHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHH--HTCCEEEECTTTTGGG--CSSHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH--CCCCEEEECCHHHCCC--CCCHHHHHHHHHHHHHHHHH
T ss_conf 89999999999998349993699989988999999998--6989999881887589--99999999999999999884
No 25
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=93.69 E-value=0.47 Score=27.26 Aligned_cols=191 Identities=10% Similarity=0.087 Sum_probs=104.0
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC---------C----------
Q ss_conf 886899899999999749989998247883348889999988740001367415888348---------5----------
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP---------N---------- 80 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p---------~---------- 80 (261)
....+|+.+....+-++|-|+|=+.+.+= -...+.++..+++.+..+ ++++..-+.+ .
T Consensus 32 ~~~~~d~~~~i~~~ae~Gfd~iEl~~~~~-~~~~~~~~~~lk~~l~~~--gL~i~~~~~~~~~~~~~s~d~~~r~~~i~~ 108 (309)
T 2hk0_A 32 HEWSAKFGPYIEKVAKLGFDIIEVAAHHI-NEYSDAELATIRKSAKDN--GIILTAGIGPSKTKNLSSEDAAVRAAGKAF 108 (309)
T ss_dssp SCTTSCSHHHHHHHHHTTCSEEEEEHHHH-TTSCHHHHHHHHHHHHHT--TCEEEEECCCCSSSCSSCSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEECCCCC-CCCCHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 88898999999999984999899676766-648999999999999984--998999626876789899899999999999
Q ss_pred -HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCH----HHHHHHHHHHHHHHCCCCCEEEE---------EECCCCCCHH
Q ss_conf -689999985072128971016555333578221----33378899999862026963899---------7254444147
Q gi|254780438|r 81 -ETFLNLCERYKPEQITLVPDDPHQLTSDHGWDF----LQNQALLTKTVARLHNLGSRISL---------FADGNGNEHS 146 (261)
Q Consensus 81 -~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv----~~~~~~L~~~i~~l~~~girvSL---------FIDpd~~q~~ 146 (261)
...++++..+....+.+++=...-.......+. ..-.+.|+.+....++.|+++.+ |+. .++ ..
T Consensus 109 l~~~ie~A~~lGa~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~Gv~l~iE~~~~~~~~~~~-t~~-~~ 186 (309)
T 2hk0_A 109 FERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNRFENHVLN-TAA-EG 186 (309)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCC-SHH-HH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC-CHH-HH
T ss_conf 9999999998299889841678867778887689999999999999999999861764478844764553569-999-97
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE--------CC-CCCHHHHHHHHHHCCCC
Q ss_conf 9999740661465112111024443564336668899987665415623520--------78-98987799999736996
Q gi|254780438|r 147 LQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINA--------GH-DLTIQNIPNLINAIPYI 217 (261)
Q Consensus 147 i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA--------GH-gLn~~Nl~~~i~~Ip~I 217 (261)
+....+++.+.+-+.--.| +.+..+.... +.+.....+.. -||. |. .++|..+-..+.++.+=
T Consensus 187 ~~ll~~v~~~~vgl~~D~~-h~~~~~~d~~---~~i~~~~~~i~----hvHi~D~~r~~pG~G~id~~~i~~~L~~~gY~ 258 (309)
T 2hk0_A 187 VAFVKDVGKNNVKVMLDTF-HMNIEEDSFG---DAIRTAGPLLG----HFHTGESNRRVPGKGRMPWHEIGLALRDINYT 258 (309)
T ss_dssp HHHHHHHTCTTEEEEEEHH-HHHHHCSCHH---HHHHHHGGGEE----EEEECCTTSCCTTSSCCCHHHHHHHHHHTTCC
T ss_pred HHHHHCCCCCCCCCCCCCH-HHHHCCCCHH---HHHHHHHCEEE----EEEEECCCCCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf 4210000367765544627-8887399999---99986344188----99984698998989764999999999985997
Q ss_pred EEEEEH
Q ss_conf 388425
Q gi|254780438|r 218 SEISVG 223 (261)
Q Consensus 218 ~EvsIG 223 (261)
--+++=
T Consensus 259 G~i~~E 264 (309)
T 2hk0_A 259 GAVIME 264 (309)
T ss_dssp SEEEEC
T ss_pred EEEEEE
T ss_conf 179998
No 26
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=93.51 E-value=0.35 Score=28.11 Aligned_cols=154 Identities=9% Similarity=0.028 Sum_probs=79.7
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE-E----
Q ss_conf 84533221443223220788689989999999974998999824788334888999998874000136741588-8----
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNI-E---- 76 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNi-E---- 76 (261)
|-++|++.---+ .....|+.++.+.+.++|-+|+=+-+ .+-....+.+...+++.+... ++++.. -
T Consensus 1 ~~~~g~~~~~~~------~~~~~D~~~~l~~~~~~G~~~vEl~~-~~~~~~~~~~~~~~~~~~~~~--gl~i~~~~~~~~ 71 (290)
T 2qul_A 1 MNKVGMFYTYWS------TEWMVDFPATAKRIAGLGFDLMEISL-GEFHNLSDAKKRELKAVADDL--GLTVMCCIGLKS 71 (290)
T ss_dssp CCCEEEETTSSC------SSSCCCHHHHHHHHHHTTCSEEEEES-TTGGGSCHHHHHHHHHHHHHH--TCEEEEEEEECG
T ss_pred CCCEEEEEEEEC------CCCCCCHHHHHHHHHHHCCCEEEECC-CCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCC
T ss_conf 940136878751------78888999999999984999999787-776658988999999999974--996899722676
Q ss_pred ----ECCCH-----------HHHHHHHHHCCCEEEEEECCCCCCCCC-CCCCH----HHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf ----34856-----------899999850721289710165553335-78221----33378899999862026963899
Q gi|254780438|r 77 ----GYPNE-----------TFLNLCERYKPEQITLVPDDPHQLTSD-HGWDF----LQNQALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 77 ----g~p~~-----------e~i~ia~~ikP~qvtLVPe~r~elTTe-gGldv----~~~~~~L~~~i~~l~~~girvSL 136 (261)
..|.+ +.++++.+.....+++++-.....+.. ..-+- ..-.+.|+.+....++.|+++.+
T Consensus 72 ~~~~~s~d~~~r~~~~~~~~~~i~~A~~lG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~A~~~gi~l~i 151 (290)
T 2qul_A 72 EYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYAL 151 (290)
T ss_dssp GGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_conf 78989989999999999999999999981998898215555677788874468999999999999999999851521465
Q ss_pred EEC--------CCCCCHHHHHHHHCCCCE--EEECCCCC
Q ss_conf 725--------444414799997406614--65112111
Q gi|254780438|r 137 FAD--------GNGNEHSLQAAKLTGADC--IELYTGPY 165 (261)
Q Consensus 137 FID--------pd~~q~~i~~a~~~Gad~--VElhTG~Y 165 (261)
=.- +.++ ..++...+++.+. +.+-||..
T Consensus 152 E~~~~~~~~~~~t~~-~~~~li~~~~~~~vg~~~D~~h~ 189 (290)
T 2qul_A 152 EVVNRFEQWLCNDAK-EAIAFADAVDSPACKVQLDTFHM 189 (290)
T ss_dssp ECCCTTTCSSCCSHH-HHHHHHHHHCCTTEEEEEEHHHH
T ss_pred EECCCCCCCCCCCHH-HHHHHHHHHCCCCCEEEECHHHH
T ss_conf 630554467658799-99766676338764055557999
No 27
>3kws_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=93.43 E-value=0.52 Score=26.97 Aligned_cols=202 Identities=11% Similarity=0.062 Sum_probs=106.7
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEE-----EEEC---CCH-----------HH
Q ss_conf 8998999999997499899982478833488899999887400013674158-----8834---856-----------89
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELN-----IEGY---PNE-----------TF 83 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elN-----iEg~---p~~-----------e~ 83 (261)
.-++.+....+.+.|-|||=++.+..... +..+++.+... ++++. ..++ |++ +.
T Consensus 37 ~~~l~e~l~~~~~~GfdgiEl~~~~~~~~-----~~~~k~~l~~~--gl~v~s~~~~~~~~l~~~d~~~R~~~ie~~k~~ 109 (287)
T 3kws_A 37 GESLNEKLDFMEKLGVVGFEPGGGGLAGR-----VNEIKQALNGR--NIKVSAICAGFKGFILSTDPAIRKECMDTMKEI 109 (287)
T ss_dssp CSSHHHHHHHHHHTTCCEEECBSTTCGGG-----HHHHHHHHTTS--SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCHHH-----HHHHHHHHHHH--CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999999980999899789743645-----99999999983--997999925887667896999999999999999
Q ss_pred HHHHHHHCCCEEEEEECCCCCC----CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE---CC-----CCCCHHHHHHH
Q ss_conf 9999850721289710165553----335782213337889999986202696389972---54-----44414799997
Q gi|254780438|r 84 LNLCERYKPEQITLVPDDPHQL----TSDHGWDFLQNQALLTKTVARLHNLGSRISLFA---DG-----NGNEHSLQAAK 151 (261)
Q Consensus 84 i~ia~~ikP~qvtLVPe~r~el----TTegGldv~~~~~~L~~~i~~l~~~girvSLFI---Dp-----d~~q~~i~~a~ 151 (261)
++++.++.-..+.++|-..... +++.-|+. -.+.|+.+....++.|+++.+=- .+ .+ +..++...
T Consensus 110 i~~a~~lGa~~v~~~~~~~~~~~~~~~~~e~~~~--~~~~l~~l~~~A~~~Gv~l~~E~~~~~~~~~~~t~-~~~~~l~~ 186 (287)
T 3kws_A 110 IAAAGELGSTGVIIVPAFNGQVPALPHTMETRDF--LCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQV-ADAASLCR 186 (287)
T ss_dssp HHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHH--HHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCH-HHHHHHHH
T ss_pred HHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHCCEEEEEECCCCCCEEECCH-HHHHHHHH
T ss_conf 9999995998034245667778888888999999--99999999999996298799996435687000678-99778998
Q ss_pred HCCCCE--EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE------------CCCCCHHHHHHHHHHCCCC
Q ss_conf 406614--65112111024443564336668899987665415623520------------7898987799999736996
Q gi|254780438|r 152 LTGADC--IELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINA------------GHDLTIQNIPNLINAIPYI 217 (261)
Q Consensus 152 ~~Gad~--VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA------------GHgLn~~Nl~~~i~~Ip~I 217 (261)
+++.+. +-+=||++.- ...... +.+.....+.. -||. ||..+|..+-..+.++.+=
T Consensus 187 ~v~~p~~gl~~D~~H~~~---~~~d~~---~~~~~~~~~i~----hvHi~D~~~~~~p~~~g~~~~~~~i~~~L~~~Gy~ 256 (287)
T 3kws_A 187 DINNPGVRCMGDFWHMTW---EETSDM---GAFISGGEYLQ----HVHVASRKRRSMPGEDGDADNYINGFKGLKMIGYN 256 (287)
T ss_dssp HHCCTTEEEEEEHHHHHH---HCSCHH---HHHHHHGGGEE----EEEECCTTTSCSTTTTGGGCCCHHHHHHHHHTTCC
T ss_pred HHCCCCCCCCCCCHHHHH---CCCCHH---HHHHHHCCEEE----EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 738665554434256777---276669---99987403166----89989889998899998742099999999983998
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3884259999999994099999999999
Q gi|254780438|r 218 SEISVGHAFAATALECGVKEAVFCFRRA 245 (261)
Q Consensus 218 ~EvsIGHaiIseAl~~GL~~aI~~~~~i 245 (261)
-=+++=++--.+. ...++++++-+++.
T Consensus 257 G~l~~E~~~~~~~-~~~~~~~~~~lr~~ 283 (287)
T 3kws_A 257 NYVSFECGCQGDR-NVVVPAAVKLLREQ 283 (287)
T ss_dssp SEEEECCCCSSCH-HHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCH-HHHHHHHHHHHHHH
T ss_conf 2799973775786-79999999999999
No 28
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=93.40 E-value=0.52 Score=26.94 Aligned_cols=201 Identities=8% Similarity=0.026 Sum_probs=117.1
Q ss_pred CCCCHHHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH-HHHHHHHHCCCEEEEE
Q ss_conf 689989999999974--9989998247883348889999988740001367415888348568-9999985072128971
Q gi|254780438|r 22 PWPNLVHIGKIALQS--GASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET-FLNLCERYKPEQITLV 98 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~--GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e-~i~ia~~ikP~qvtLV 98 (261)
+++|+-++-.++.+. +++.|-+|...=-+.= .+-+..|++.... ..+-+.+-.+-.+. +.+.+.+.-.+.+|+-
T Consensus 11 D~~~~~~~l~~~~~~~~~v~~ikig~~l~~~~G-~~~i~~l~~~~~~--~~i~~d~K~~Di~~~~~~~~~~~gad~itvh 87 (216)
T 1q6o_A 11 DNQTMDSAYETTRLIAEEVDIIEVGTILCVGEG-VRAVRDLKALYPH--KIVLADAKIADAGKILSRMCFEANADWVTVI 87 (216)
T ss_dssp CCSSHHHHHHHHHHHGGGCSEEEECHHHHHHHC-THHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEECCCCHHCCC-HHHHHHHHHHCCC--CEEEHHHHCCCHHHHHHHHHHHHCCCEEEEC
T ss_conf 789999999999972887778992721211379-9999999987899--7463122327737799999998499999981
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
+.. | ...++.+++..++.|+.+-+-+-+..+........+.|+|.+-+|.+..+...... .....
T Consensus 88 ~~~--------g------~~~i~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 152 (216)
T 1q6o_A 88 CCA--------D------INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVA-WGEAD 152 (216)
T ss_dssp TTS--------C------HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHHHHHTTCC-CCHHH
T ss_pred CCC--------C------HHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCEE-CCHHH
T ss_conf 317--------8------79999999998752221123106999899999888668232102102435878873-78889
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68899987665415623520789898779999973699638842599999999940999999999999741
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~ 249 (261)
+..++ .....+..+-++-|.+++++...+ + -+.+=+-+|-+|.. | -=-.+++++|++.+++-
T Consensus 153 ~~~i~----~~~~~~~~i~~~gGi~~~~~~~~~-~-~Gad~iVVGr~I~~-a--~dp~~a~~~~~~~i~~~ 214 (216)
T 1q6o_A 153 ITAIK----RLSDMGFKVTVTGGLALEDLPLFK-G-IPIHVFIAGRSIRD-A--ASPVEAARQFKRSIAEL 214 (216)
T ss_dssp HHHHH----HHHHTTCEEEEESSCCGGGGGGGT-T-SCCSEEEESHHHHT-S--SCHHHHHHHHHHHHHHH
T ss_pred HHHHH----HHHCCCCEEEECCCCCCCCHHHHH-H-CCCCEEEECHHHCC-C--CCHHHHHHHHHHHHHHH
T ss_conf 99999----984689738768998803699999-8-59999998825417-9--99999999999999997
No 29
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium}
Probab=93.05 E-value=0.34 Score=28.24 Aligned_cols=200 Identities=10% Similarity=0.015 Sum_probs=109.0
Q ss_pred CCCCHHHHHHHHHH--CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHHCCCEEEEE
Q ss_conf 68998999999997--4998999824788334888999998874000136741588834856-89999985072128971
Q gi|254780438|r 22 PWPNLVHIGKIALQ--SGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-TFLNLCERYKPEQITLV 98 (261)
Q Consensus 22 ~~P~~~~~a~~~~~--~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e~i~ia~~ikP~qvtLV 98 (261)
|..|+-++-.++.+ .++++|-+|.--=-+. -++-+..|++.... ..+-+.+-+.-.+ .+...+.+...+.+|+-
T Consensus 8 D~~~~~~~l~~~~~~~~~v~~ikvg~~l~~~~-G~~~i~~l~~~~~~--~~i~~D~K~~di~~t~~~~~~~~gad~vtvh 84 (211)
T 3f4w_A 8 DELTLPEAMVFMDKVVDDVDIIEVGTPFLIRE-GVNAIKAIKEKYPH--KEVLADAKIMDGGHFESQLLFDAGADYVTVL 84 (211)
T ss_dssp CSCCHHHHHHHHHHHGGGCSEEEECHHHHHHH-TTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHCCCCCEEEECEEEHHCC-CHHHHHHHHHHCCC--CCEEEEEECCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 88999999999998179877999466204217-98999999985799--7079888434868899999997199999982
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 016555333578221333788999998620269638997-2544441479999740661465112111024443564336
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
++ +|.+ .++..++..++.|..+-+. +-+.-.....+...+.++|.+-+++|..+..+....
T Consensus 85 ~~--------~g~~------~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 146 (211)
T 3f4w_A 85 GV--------TDVL------TIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP---- 146 (211)
T ss_dssp TT--------SCHH------HHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS----
T ss_pred HH--------HCHH------HHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCC----
T ss_conf 64--------0667------89999999875244347874089999999998763588999988622531205769----
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
..++....+......+ -..=|.++++...++. -+.+=+-+|-+|..- ---.+++++|++.+++.+
T Consensus 147 -~~~i~~~~~~~~~~~i--~v~gGi~~~~~~~a~~--~Gad~iVvGraI~~a---~dP~~~~~~i~e~i~~~~ 211 (211)
T 3f4w_A 147 -IDDLITMLKVRRKARI--AVAGGISSQTVKDYAL--LGPDVVIVGSAITHA---ADPAGEARKISQVLLQHH 211 (211)
T ss_dssp -HHHHHHHHHHCSSCEE--EEESSCCTTTHHHHHT--TCCSEEEECHHHHTC---SSHHHHHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHCCCCCE--ECCCCCCCCCHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHC
T ss_conf -9999999997187665--2289706057999998--598999988587379---999999999999998519
No 30
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=92.95 E-value=0.61 Score=26.49 Aligned_cols=100 Identities=8% Similarity=0.188 Sum_probs=63.1
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEE---CCC-CCCCCCHHHHHHHHHHHCCCCCCC-EEEEE
Q ss_conf 8453322144322322078868998999999997499899982---478-833488899999887400013674-15888
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVH---PRP-DQRHIRYTDLPEIRRLIDEQFPKA-ELNIE 76 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH---~R~-DrRHI~~~Dv~~l~~~~~~~~~~~-elNiE 76 (261)
|.|+|+ |+.+ .+ .+.++.+.+.+.|++++-+= ||. +.+=++++|+..+++.+.+..-++ .+-.-
T Consensus 1 m~~iG~---h~~~----~~----~l~~~~~~~~e~G~~~~qif~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (287)
T 2x7v_A 1 MIKIGA---HMPI----SK----GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCH 69 (287)
T ss_dssp CCCEEE---ECCC----TT----CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCEEEE---EECC----CC----CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 964877---6323----31----299999999974999999967998788889999999999999999859984278742
Q ss_pred E----C---CC-----------HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 3----4---85-----------68999998507212897101655533357822
Q gi|254780438|r 77 G----Y---PN-----------ETFLNLCERYKPEQITLVPDDPHQLTSDHGWD 112 (261)
Q Consensus 77 g----~---p~-----------~e~i~ia~~ikP~qvtLVPe~r~elTTegGld 112 (261)
+ + |. .+.+++|.+.....+++.|-.....+.+.+|+
T Consensus 70 ~~y~~nl~~~d~~~r~~~i~~l~~~i~~a~~LGa~~vv~h~g~~~~~~~~~~~~ 123 (287)
T 2x7v_A 70 SGYLINLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGID 123 (287)
T ss_dssp CCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHH
T ss_pred CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHH
T ss_conf 631463059999999999999999999999809980530687778888899999
No 31
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.89 E-value=0.62 Score=26.44 Aligned_cols=205 Identities=12% Similarity=0.106 Sum_probs=140.0
Q ss_pred CCCCHHHHHHHHHHCCCCEEEE-----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 6899899999999749989998-----24788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTV-----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITv-----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++=++-+....++++|+|.|-+ |-=|.- -+..+.+..+++.... ..+..+-+..-+.++.-..+..++.+|
T Consensus 17 d~~~L~~~i~~l~~~~~d~iHiDimDG~Fvpn~-t~~~~~i~~i~~~~~~---~~dvHlMv~~p~~~i~~~~~~g~~~i~ 92 (228)
T 1h1y_A 17 DFANLAAEADRMVRLGADWLHMDIMDGHFVPNL-TIGAPVIQSLRKHTKA---YLDCHLMVTNPSDYVEPLAKAGASGFT 92 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB-CBCHHHHHHHHTTCCS---EEEEEEESSCGGGGHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHHCCC---CEEEEEEECCHHHHHHHHHHCCCCEEE
T ss_conf 999999999999975999899988679667755-7098999999861675---446889971657549999856997799
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH--CCCCEEEECCCCCHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974--0661465112111024443564
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL--TGADCIELYTGPYGACYNNPQQ 174 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~--~Gad~VElhTG~Ya~a~~~~~~ 174 (261)
+=+|.-. ..+..++..+++.|+++.+=+.|+..-..++.... -.+|.|=+-|..-. |...+.
T Consensus 93 ~H~E~~~--------------~~~~~~i~~i~~~g~k~Gial~p~t~~~~~~~~l~~~~~~d~vlim~V~PG--~~GQ~f 156 (228)
T 1h1y_A 93 FHIEVSR--------------DNWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPG--FGGQKF 156 (228)
T ss_dssp EEGGGCT--------------TTHHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTT--CSSCCC
T ss_pred EECCCCC--------------CCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCC--CCCCCC
T ss_conf 6050023--------------589999999997497311584489988999999865314565789985589--888635
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3366688999876654156235207898987799999736996388425999999999409999999999997410565
Q gi|254780438|r 175 ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDNT 253 (261)
Q Consensus 175 ~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~~ 253 (261)
...-++++++.-+ ...++.+-+-=|.|.+|++.+.+ -+.+-+-.|=+|.. + --.++++++++++++..++.+
T Consensus 157 ~~~~l~kI~~l~~--~~~~~~I~VDGGI~~~~i~~l~~--aGad~iV~GSaif~-~--~d~~~~i~~lr~~i~~~~~~~ 228 (228)
T 1h1y_A 157 MPEMMEKVRALRK--KYPSLDIEVDGGLGPSTIDVAAS--AGANCIVAGSSIFG-A--AEPGEVISALRKSVEGSQNKS 228 (228)
T ss_dssp CGGGHHHHHHHHH--HCTTSEEEEESSCSTTTHHHHHH--HTCCEEEESHHHHT-S--SCHHHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHH--CCCCCEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHC-C--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 7047899999996--69986499966869888999998--69999997769878-9--999999999999999876159
No 32
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3- epimerase, D-tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=92.59 E-value=0.67 Score=26.17 Aligned_cols=206 Identities=12% Similarity=0.068 Sum_probs=94.4
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC-------------C-----------
Q ss_conf 9899999999749989998247883348889999988740001367415888348-------------5-----------
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP-------------N----------- 80 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-------------~----------- 80 (261)
|+-++-+.+.++|-|||-++..+. ...|...+++.+.+. ++++.--+.+ +
T Consensus 42 ~l~~~l~~ak~~Gfd~VEl~~~~~----~~~~~~~lk~~l~~~--gL~v~s~~~~~~~~~~~~~~~~~d~~~r~~~i~~~ 115 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDP----SIVDWNEVKILSEEL--NLPICAIGTGQAYLADGLSLTHPNDEIRKKAIERV 115 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCG----GGSCHHHHHHHHHHH--TCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEECCCCC----CCCCHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 999999999985999999788894----617899999999983--99089984562102477777897999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC------CCCHHHHHHHHC
Q ss_conf 68999998507212897101655-53335782213337889999986202696389972544------441479999740
Q gi|254780438|r 81 ETFLNLCERYKPEQITLVPDDPH-QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN------GNEHSLQAAKLT 153 (261)
Q Consensus 81 ~e~i~ia~~ikP~qvtLVPe~r~-elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd------~~q~~i~~a~~~ 153 (261)
.+.++++.......++..|-.+. ..+.+..|+. -.+.|+.+.....+.|+.+- +..+. .....++...++
T Consensus 116 ~~~i~~a~~lG~~~i~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~gv~le-~~~~~~~~~~~t~~~~~~li~~v 192 (290)
T 2zvr_A 116 VKHTEVAGMFGALVIIGLVRGRREGRSYEETEEL--FIESMKRLLELTEHAKFVIE-PLNRYETDFINTIDDALRILRKI 192 (290)
T ss_dssp HHHHHHHHHHTCEEEESGGGCCCTTSCHHHHHHH--HHHHHHHHHHHCSSCCEEEC-CCCTTTCSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHCEEE-EECCCCCEEEECHHHHHHHHHHH
T ss_conf 9999999973993799568988888999999999--99999999999775221485-20353513330388899999980
Q ss_pred CCCEE--EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE----EEECCC-CCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 66146--5112111024443564336668899987665415623----520789-8987799999736996388425999
Q gi|254780438|r 154 GADCI--ELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQ----INAGHD-LTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 154 Gad~V--ElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~----VnAGHg-Ln~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
+.+.+ .+-+|....+ ..... +.+.....+....-+. ..-|.| ++|..+-..+.+..+=-=+++=.+
T Consensus 193 ~~~~~g~~~D~~H~~~~---g~d~~---~~i~~~~~~i~~vHi~D~~r~~pG~G~id~~~il~~L~~~gy~G~~~~E~~- 265 (290)
T 2zvr_A 193 NSNRVGILADTFHMNIE---EVNIP---ESLKRAGEKLYHFHVADSNRWAPGCGHFDFRSVFNTLKEIGYNRYVSVECL- 265 (290)
T ss_dssp CCTTEEEEEEHHHHHHH---CSSHH---HHHHHHGGGEEEEEECCTTSSSTTSSCCCHHHHHHHHHHTTCCSEEEECCC-
T ss_pred CCCCCCCCCCCHHHHHC---CCCHH---HHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEC-
T ss_conf 98446666671888853---89999---999983371789999679999999865099999999998499817999845-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999940999999999999741
Q gi|254780438|r 227 AATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 227 IseAl~~GL~~aI~~~~~ii~~~ 249 (261)
...-+.+++.++.++.+++-
T Consensus 266 ---~~~~~~~~~~~~s~~~lk~~ 285 (290)
T 2zvr_A 266 ---PLPGGMEEAAEIAFKTLKEL 285 (290)
T ss_dssp ---STTTSHHHHHHHHHHHHHHH
T ss_pred ---CCCCCHHHHHHHHHHHHHHH
T ss_conf ---68999899999999999999
No 33
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=92.55 E-value=0.68 Score=26.14 Aligned_cols=125 Identities=14% Similarity=0.051 Sum_probs=59.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCC-----CCEEEEEE------CCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 5533357822133378899999862026-----96389972------544441479999740661465112111024443
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNL-----GSRISLFA------DGNGNEHSLQAAKLTGADCIELYTGPYGACYNN 171 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~-----girvSLFI------Dpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~ 171 (261)
+..|-|-|=++.....++.++++..++. .+|+|..- +++-....++...+.|+|.+++..|.|......
T Consensus 180 N~R~DeYGGs~enR~Rf~~Eii~avr~~v~~~~~vri~~~~~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~~~~~~~~~~ 259 (338)
T 1z41_A 180 NHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADIN 259 (338)
T ss_dssp CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCC
T ss_conf 85678677777787889999999999985467648854543457886446699999999983974000133430135444
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 5643366688999876654156235207898-987799999736996388425999999999
Q gi|254780438|r 172 PQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 172 ~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
.. . .....+.+..+... ++-|=+--++ +.+-...+++. ...+=|.+|-++|++--+
T Consensus 260 ~~-~-~~~~~~~~~ik~~~--~~pvi~~G~i~~~~~ae~~l~~-g~~D~V~~gR~~iadP~~ 316 (338)
T 1z41_A 260 VF-P-GYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQN-GRADLIFIGRELLRDPFF 316 (338)
T ss_dssp CC-T-TTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHT-TSCSEEEECHHHHHCTTH
T ss_pred CC-C-CCCHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCHH
T ss_conf 68-8-62078999999875--9528996894999999999987-995523865998869299
No 34
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.37 E-value=0.72 Score=25.99 Aligned_cols=168 Identities=17% Similarity=0.218 Sum_probs=99.0
Q ss_pred CCCCCCHHHHHHHHCCCC------CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 533221443223220788------68998999999997499899982478833488899999887400013674158883
Q gi|254780438|r 4 SVSVNLNAVAVLRNRRNL------PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG 77 (261)
Q Consensus 4 ~LsVNidhiAtLRnaRg~------~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg 77 (261)
+++...+.|..+|+--.- -.=+|........++|++.||+|+-.+.-+.. +-+..+++ . +.+.-+-.
T Consensus 48 n~t~~~~~i~~i~~~~~~~~dvHlMv~~p~~~i~~~~~~g~~~i~~H~E~~~~~~~-~~i~~i~~----~--g~k~Gial 120 (228)
T 1h1y_A 48 NLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQ-ELIQSIKA----K--GMRPGVSL 120 (228)
T ss_dssp CBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGCTTTHH-HHHHHHHH----T--TCEEEEEE
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHH-HHHHHHHH----C--CCCEEEEE
T ss_conf 55709899999986167544688997165754999985699779960500235899-99999997----4--97311584
Q ss_pred CCCH---HHHHHHHH-HCCCEEEEEECCCCCCCCCCCCCH-HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 4856---89999985-072128971016555333578221-333788999998620269638997254444147999974
Q gi|254780438|r 78 YPNE---TFLNLCER-YKPEQITLVPDDPHQLTSDHGWDF-LQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 78 ~p~~---e~i~ia~~-ikP~qvtLVPe~r~elTTegGldv-~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
+|.. ++..+... -.-+++++....|+. +|=.+ ..-.++ ++.+++..-.+.+.+|-..++..+....+
T Consensus 121 ~p~t~~~~~~~~l~~~~~~d~vlim~V~PG~----~GQ~f~~~~l~k----I~~l~~~~~~~~I~VDGGI~~~~i~~l~~ 192 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTVEPGF----GGQKFMPEMMEK----VRALRKKYPSLDIEVDGGLGPSTIDVAAS 192 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESSCTTC----SSCCCCGGGHHH----HHHHHHHCTTSEEEEESSCSTTTHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEEEECCCC----CCCCCCCHHHHH----HHHHHHCCCCCEEEEECCCCHHHHHHHHH
T ss_conf 4899889999998653145657899855898----886357047899----99999669986499966869888999998
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 066146511211102444356433666889998766541
Q gi|254780438|r 153 TGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQK 191 (261)
Q Consensus 153 ~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~ 191 (261)
.|||.+=.=.+= |+.. .....+.+++++++.|++
T Consensus 193 aGad~iV~GSai----f~~~-d~~~~i~~lr~~i~~~~~ 226 (228)
T 1h1y_A 193 AGANCIVAGSSI----FGAA-EPGEVISALRKSVEGSQN 226 (228)
T ss_dssp HTCCEEEESHHH----HTSS-CHHHHHHHHHHHHHHC--
T ss_pred CCCCEEEECHHH----HCCC-CHHHHHHHHHHHHHHHHH
T ss_conf 699999977698----7899-999999999999998761
No 35
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=91.97 E-value=0.29 Score=28.72 Aligned_cols=216 Identities=11% Similarity=0.103 Sum_probs=109.2
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCC-CCCCCHHHHHHHHHHHCCCCCCCE---EEEEE---CCC-----------HHHH
Q ss_conf 89989999999974998999824788-334888999998874000136741---58883---485-----------6899
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPD-QRHIRYTDLPEIRRLIDEQFPKAE---LNIEG---YPN-----------ETFL 84 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~D-rRHI~~~Dv~~l~~~~~~~~~~~e---lNiEg---~p~-----------~e~i 84 (261)
.-++-++...+.++|-+||=+....- ...+.+..+.++++.+... +++ ++.-+ .+. .+.+
T Consensus 13 ~~~l~~~l~~aa~~G~~~iEl~~~~~~~~~~~~~~~~~l~~~~~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTH--HIKPLALNALVFFNNRDEKGHNEIITEFKGMM 90 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTS--SCEEEEEEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHC--CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999999999597999967676660014865399999999980--99399983676778999899999999999999
Q ss_pred HHHHHHCCCEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-------CCCCHHHHHHHHCCCC
Q ss_conf 9998507212897101655-5333578221333788999998620269638997254-------4441479999740661
Q gi|254780438|r 85 NLCERYKPEQITLVPDDPH-QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG-------NGNEHSLQAAKLTGAD 156 (261)
Q Consensus 85 ~ia~~ikP~qvtLVPe~r~-elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp-------d~~q~~i~~a~~~Gad 156 (261)
+++..+....+.+.|-... ..+.+-.|+ .-.+.++.+....++.|+++++=..+ .++ ..++...+++.+
T Consensus 91 ~~a~~lG~~~i~~~~~~~~~~~~~~~~~~--~~~~~l~~l~~~a~~~gv~l~iE~~~~~~~~~~~~~-~~~~li~~~~~~ 167 (278)
T 1i60_A 91 ETCKTLGVKYVVAVPLVTEQKIVKEEIKK--SSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFE-QAYEIVNTVNRD 167 (278)
T ss_dssp HHHHHHTCCEEEEECCBCSSCCCHHHHHH--HHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHH-HHHHHHHHHCCT
T ss_pred HHHHHCCCCCEEECCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH-HHHHHHHHHHHC
T ss_conf 99998399960458898877789899999--999999999999986198448984345776258889-977899875220
Q ss_pred EE--EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE---------------EEECC-CCCHHHHHHHHHHCCCCE
Q ss_conf 46--5112111024443564336668899987665415623---------------52078-989877999997369963
Q gi|254780438|r 157 CI--ELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQ---------------INAGH-DLTIQNIPNLINAIPYIS 218 (261)
Q Consensus 157 ~V--ElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~---------------VnAGH-gLn~~Nl~~~i~~Ip~I~ 218 (261)
.+ -+=||.+... +......+..+ ..+.....+. +--|. .+++..+-..+.++.+=.
T Consensus 168 ~vg~~~D~~h~~~~---~~~~~~~~~~~---~~~i~~vHl~D~~~~~~~~~~~~~~~~~G~G~id~~~i~~~L~~~gy~G 241 (278)
T 1i60_A 168 NVGLVLDSFHFHAM---GSNIESLKQAD---GKKIFIYHIDDTEDFPIGFLTDEDRVWPGQGAIDLDAHLSALKEIGFSD 241 (278)
T ss_dssp TEEEEEEHHHHHHT---TCCHHHHHTSC---GGGEEEEEECEECCCCTTTCCGGGEESTTSSSSCHHHHHHHHHHTTCCS
T ss_pred CCCEEECHHHHHHC---CCCHHHHHHHC---CHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 12302055887646---99999999861---1106689995377777664453356589895438999999999849971
Q ss_pred EEEEHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8842599---999999940999999999999741
Q gi|254780438|r 219 EISVGHA---FAATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 219 EvsIGHa---iIseAl~~GL~~aI~~~~~ii~~~ 249 (261)
=+++=.+ .-.......++.+.+.+++++++.
T Consensus 242 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (278)
T 1i60_A 242 VVSVELFRPEYYKLTAEEAIQTAKKTTVDVVSKY 275 (278)
T ss_dssp EEEECCCCGGGGGSCHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 7999846820133799999999999999999997
No 36
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=91.47 E-value=0.64 Score=26.34 Aligned_cols=125 Identities=12% Similarity=0.087 Sum_probs=78.1
Q ss_pred HHHHHHHH---HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCE
Q ss_conf 68999998---507212897101655533357822133378899999862026963899725444414799997406614
Q gi|254780438|r 81 ETFLNLCE---RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADC 157 (261)
Q Consensus 81 ~e~i~ia~---~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~ 157 (261)
+++++.+. +..-.++|+|=.-. .. .....+++...++.+++.++.+++-+.+- +...++..++.|+++
T Consensus 102 eeI~e~a~~~~~~G~~~i~l~~g~~-------~~-~~~~~~~~~~~i~~i~~~~~~i~~~~~~l-~~e~l~~Lk~aG~~~ 172 (369)
T 1r30_A 102 EQVLESARKAKAAGSTRFCMGAAWK-------NP-HERDMPYLEQMVQGVKAMGLEACMTLGTL-SESQAQRLANAGLDY 172 (369)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCS-------SC-CTTTHHHHHHHHHHHHHTTSEEEEECSSC-CHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCC-------CC-CCCHHHHHHHHHHHHHHCCCEEEEECCCC-CHHHHHHHHHHCCCE
T ss_conf 9999999989875997999995788-------88-70279999999998520475476512679-899999998518788
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE----CCCCCHHHHHHHHHHCC
Q ss_conf 65112111024443564336668899987665415623520----78989877999997369
Q gi|254780438|r 158 IELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINA----GHDLTIQNIPNLINAIP 215 (261)
Q Consensus 158 VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA----GHgLn~~Nl~~~i~~Ip 215 (261)
+-+.-..+...+..... ..-.+...++.+.|+++|+.+.+ |||=+.+-....+..+.
T Consensus 173 ~~~~lEt~~~~~~~~~~-~~~~~~rl~~l~~a~~~Gi~~~~g~i~G~gEt~ed~i~~l~~Lr 233 (369)
T 1r30_A 173 YNHNLDTSPEFYGNIIT-TRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLA 233 (369)
T ss_dssp EECCCBSCHHHHHHHCC-SSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 83434245554213434-58799999999999982897358889788999999999999998
No 37
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=91.11 E-value=0.97 Score=25.08 Aligned_cols=195 Identities=15% Similarity=0.142 Sum_probs=115.6
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCH--HHHHHHHHHHCCCCCCCEEEEEECCCH--------H---HH---HHHHHH
Q ss_conf 9999999974998999824788334888--999998874000136741588834856--------8---99---999850
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPRPDQRHIRY--TDLPEIRRLIDEQFPKAELNIEGYPNE--------T---FL---NLCERY 90 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R~DrRHI~~--~Dv~~l~~~~~~~~~~~elNiEg~p~~--------e---~i---~ia~~i 90 (261)
++-|..|.++|||-|-+--.-..==.+| ..+..+++.+ ++|+.+=.-|.. | |. ..+.+.
T Consensus 11 ~~~a~~A~~~GAdRIELCs~L~~GGlTPS~gli~~~~~~~-----~ipv~vMIRPR~GdF~Ys~~E~~~M~~dI~~~k~~ 85 (256)
T 1twd_A 11 MECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRV-----TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVREL 85 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHC-----CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-----CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9999999982999899846766699799999999999973-----99749998458998888999999999999999985
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE--EC--CCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 72128971016555333578221333788999998620269638997--25--444414799997406614651121110
Q gi|254780438|r 91 KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF--AD--GNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 91 kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF--ID--pd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
.-+-+-+ +-||.||.+|... ++..++..+. ..+-+- +| +||.+ +++...++|+++|== .|--.
T Consensus 86 G~dGvVf-----G~L~~dg~iD~~~----~~~Li~~a~~--l~vTFHRAfD~~~d~~~-al~~Li~lG~~rILT-SG~~~ 152 (256)
T 1twd_A 86 GFPGLVT-----GVLDVDGNVDMPR----MEKIMAAAGP--LAVTFHRAFDMCANPLY-TLNNLAELGIARVLT-SGQKS 152 (256)
T ss_dssp TCSEEEE-----CCBCTTSSBCHHH----HHHHHHHHTT--SEEEECGGGGGCSCHHH-HHHHHHHHTCCEEEE-CTTSS
T ss_pred CCCEEEE-----EEECCCCCCCHHH----HHHHHHHHCC--CCEEEECCHHHHCCHHH-HHHHHHHCCCCEEEC-CCCCC
T ss_conf 9996788-----6688999849999----9999998576--86477442565289999-999999759897865-78967
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH--------HHHHHHHHH---
Q ss_conf 244435643366688999876654156235207898987799999736996388425999--------999999409---
Q gi|254780438|r 167 ACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF--------AATALECGV--- 235 (261)
Q Consensus 167 ~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai--------IseAl~~GL--- 235 (261)
.+... ++.+++..+++ -|..+-+|=|+|.+|+..++. . .+.|+.-.-.- -...+.+|.
T Consensus 153 ~a~~G-------~~~L~~L~~~a--~~~iIm~GgGI~~~Ni~~l~~-t-G~~e~H~Sa~~~~~s~~~~~~~~v~mg~~~~ 221 (256)
T 1twd_A 153 DALQG-------LSKIMELIAHR--DAPIIMAGAGVRAENLHHFLD-A-GVLEVHSSAGAWQASPMRYRNQGLSMSSDEH 221 (256)
T ss_dssp STTTT-------HHHHHHHHTSS--SCCEEEEESSCCTTTHHHHHH-H-TCSEEEECCEEEECCCCCCCC----------
T ss_pred CHHHH-------HHHHHHHHHHC--CCCEEEEECCCCHHHHHHHHH-C-CCCEEEECCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 77776-------99999999856--993899727779999999997-7-9887987878656785523678764578878
Q ss_pred ----------HHHHHHHHHHHHHHH
Q ss_conf ----------999999999997410
Q gi|254780438|r 236 ----------KEAVFCFRRACGQHL 250 (261)
Q Consensus 236 ----------~~aI~~~~~ii~~~~ 250 (261)
++.|+++++++++..
T Consensus 222 ~~e~~~~~td~~~V~~~~~~l~~~~ 246 (256)
T 1twd_A 222 ADEYSRYIVDGAAVAEMKGIIERHQ 246 (256)
T ss_dssp ---CCEEEECHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8766426129999999999999874
No 38
>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti}
Probab=91.06 E-value=0.85 Score=25.47 Aligned_cols=121 Identities=15% Similarity=0.220 Sum_probs=80.0
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE---EEEE-
Q ss_conf 845332214432232207886899899999999749989998247883348889999988740001367415---8883-
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL---NIEG- 77 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el---NiEg- 77 (261)
|..||+|. +|+|.- -++-++...|.++|.+||-+.+ ..+.+.|+.++++.+... ++++ +.-+
T Consensus 5 ~~~ls~~~---~~~~~~-----~~l~e~l~~~a~~G~~~IEl~~----~~~~~~~~~e~~~~l~~~--gl~v~~~~~~~~ 70 (284)
T 3ju2_A 5 VEGLSINL---ATIREQ-----CGFAEAVDICLKHGITAIAPWR----DQVAAIGLGEAGRIVRAN--GLKLTGLCRGGF 70 (284)
T ss_dssp CTTEEEEG---GGGTTT-----CCHHHHHHHHHHTTCCEEECBH----HHHHHHCHHHHHHHHHHT--TCEESCEEEEEC
T ss_pred CCCHHHHH---HHHCCC-----CCHHHHHHHHHHHCCCEEEECC----CCCCCCCHHHHHHHHHHC--CCEEEEEECCCC
T ss_conf 33332579---987589-----9999999999981999899777----667878999999999983--995999876766
Q ss_pred --CCC-----------HHHHHHHHHHCCCEEEEEECCCC--CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf --485-----------68999998507212897101655--53335782213337889999986202696389972
Q gi|254780438|r 78 --YPN-----------ETFLNLCERYKPEQITLVPDDPH--QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 78 --~p~-----------~e~i~ia~~ikP~qvtLVPe~r~--elTTegGldv~~~~~~L~~~i~~l~~~girvSLFI 138 (261)
.+. .++++++..+-...++++|-.+. +.+.+..|+. -.+.|+.+....++.|+++++=-
T Consensus 71 ~~~~d~~~~~~~i~~~~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~~--~~~~l~~l~~~A~~~gv~l~~E~ 144 (284)
T 3ju2_A 71 FPAPDASGREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRM--VVEGIAAVLPHARAAGVPLAIEP 144 (284)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHTBSCEEEECBCCCTTCCCHHHHHHH--HHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 688998999999999999999999949983695679866788999999999--99999999999874362589861
No 39
>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti}
Probab=91.04 E-value=0.82 Score=25.58 Aligned_cols=139 Identities=16% Similarity=0.225 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE------EECCCCC--------
Q ss_conf 48568999998507212897101655533357822133378899999862026963899------7254444--------
Q gi|254780438|r 78 YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL------FADGNGN-------- 143 (261)
Q Consensus 78 ~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL------FIDpd~~-------- 143 (261)
...+++++++.+.-=+.|-|.++. +. ...+.++-+.|++.|++++- |..||++
T Consensus 19 ~~l~e~l~~~a~~G~~~IEl~~~~-----------~~--~~~~~e~~~~l~~~gl~v~~~~~~~~~~~~d~~~~~~~i~~ 85 (284)
T 3ju2_A 19 CGFAEAVDICLKHGITAIAPWRDQ-----------VA--AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDD 85 (284)
T ss_dssp CCHHHHHHHHHHTTCCEEECBHHH-----------HH--HHCHHHHHHHHHHTTCEESCEEEEECCCCSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEECCCC-----------CC--CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 999999999998199989977766-----------78--78999999999983995999876766688998999999999
Q ss_pred -CHHHHHHHHCCCCEEEECCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCEEEE-------CCCCC-HHHHH---HH
Q ss_conf -1479999740661465112111024443-564336668899987665415623520-------78989-87799---99
Q gi|254780438|r 144 -EHSLQAAKLTGADCIELYTGPYGACYNN-PQQERIFLNKLAITAQLAQKMDLQINA-------GHDLT-IQNIP---NL 210 (261)
Q Consensus 144 -q~~i~~a~~~Gad~VElhTG~Ya~a~~~-~~~~~~el~~i~~aa~~A~~lgL~VnA-------GHgLn-~~Nl~---~~ 210 (261)
...++.|+++|+++|=+++|.....-.. ....+...+.++..+.+|...|+.+-- +|.-+ ..+.. .+
T Consensus 86 ~~~~i~~a~~lG~~~i~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~~~ 165 (284)
T 3ju2_A 86 NRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDI 165 (284)
T ss_dssp HHHHHHHHHHHTBSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999994998369567986678899999999999999999999874362589861476444422101559999999
Q ss_pred HHH-CCCC-EEEEEHHHHHHH
Q ss_conf 973-6996-388425999999
Q gi|254780438|r 211 INA-IPYI-SEISVGHAFAAT 229 (261)
Q Consensus 211 i~~-Ip~I-~EvsIGHaiIse 229 (261)
+.. -|.+ -.+-.||.....
T Consensus 166 ~~~~~~~~g~~~D~~h~~~~g 186 (284)
T 3ju2_A 166 CETLGPGVGVAIDVYHVWWDP 186 (284)
T ss_dssp HHHHCTTEEEEEEHHHHTTCT
T ss_pred HHHCCCCEEEEECCHHHHHCC
T ss_conf 984188387630424777469
No 40
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=90.60 E-value=1.1 Score=24.76 Aligned_cols=200 Identities=11% Similarity=0.019 Sum_probs=119.6
Q ss_pred CCCCHHHHHHHHH--HCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH-HHHHHHHHCCCEEEEE
Q ss_conf 6899899999999--749989998247883348889999988740001367415888348568-9999985072128971
Q gi|254780438|r 22 PWPNLVHIGKIAL--QSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET-FLNLCERYKPEQITLV 98 (261)
Q Consensus 22 ~~P~~~~~a~~~~--~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e-~i~ia~~ikP~qvtLV 98 (261)
+++|+-++..++. ..++|.+-+|...-.+. -.+=+..|++.... ..+-+.+-.+-.++ +.+.+.+..++.+|.-
T Consensus 14 D~~~~~~~~~~~~~~~~~vd~ikig~~l~~~~-G~~~i~~l~~~~~~--~~i~~D~K~~Di~~~~~~~~~~~gad~itvh 90 (218)
T 3jr2_A 14 DQTNLTDAVAVASNVASYVDVIEVGTILAFAE-GMKAVSTLRHNHPN--HILVCDMKTTDGGAILSRMAFEAGADWITVS 90 (218)
T ss_dssp CCSSHHHHHHHHHHHGGGCSEEEECHHHHHHH-TTHHHHHHHHHCTT--SEEEEEEEECSCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEEEEECHHHC-CHHHHHHHHHHCCC--CEEEEEEECCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 48999999999996388765899456426535-99999999975789--7399998514572778899887449899995
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
++. ..+.+..+++..++.|+.+-+.+-+..+-.......++|++.+-+|++.-+... .......+
T Consensus 91 ~~~--------------~~~~l~~~~~~~~~~g~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 155 (218)
T 3jr2_A 91 AAA--------------HIATIAACKKVADELNGEIQIEIYGNWTMQDAKAWVDLGITQAIYHRSRDAELA-GIGWTTDD 155 (218)
T ss_dssp TTS--------------CHHHHHHHHHHHHHHTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHH-TCCSCHHH
T ss_pred CCC--------------CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCHHH
T ss_conf 034--------------547899999987641884378427889999999988648228699972442447-73668999
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68899987665415623520789898779999973699638842599999999940999999999999741
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~ 249 (261)
+.++++ ....++.+-..=|.+.+|....+ + -+.+=+=+|-+|+.-.=- +...++++.+++-
T Consensus 156 l~~i~~----~~~~~~~i~v~gGi~~~~~~~~~-~-~GaD~iVvGraI~~a~dp----~~a~~~~~~i~~~ 216 (218)
T 3jr2_A 156 LDKMRQ----LSALGIELSITGGIVPEDIYLFE-G-IKTKTFIAGRALAGAEGQ----QTAAALREQIDRF 216 (218)
T ss_dssp HHHHHH----HHHTTCEEEEESSCCGGGGGGGT-T-SCEEEEEESGGGSHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHH----HHCCCCCEEECCCCCCCCHHHHH-H-CCCCEEEECHHHCCCCCH----HHHHHHHHHHHHH
T ss_conf 999999----84899707867996825799999-8-499999988366079999----9999999999975
No 41
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.46 E-value=0.72 Score=25.96 Aligned_cols=79 Identities=8% Similarity=0.091 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEE-------ECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33788999998620269638997-------25444414799997406614651121110244435643366688999876
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLF-------ADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQ 187 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLF-------IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~ 187 (261)
...+.|+..|+.+++.||.|++= +-.+.-...++.++++|.++||+-.|...- +. +......+
T Consensus 52 ~~~~~L~eKI~l~~~~~V~v~~GGtlfE~a~~q~~~~~y~~~~~~lGf~~IEiSdG~i~i----~~------~~~~~~I~ 121 (251)
T 1qwg_A 52 IDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDI----SL------EERNNAIK 121 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCC----CH------HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCC----CH------HHHHHHHH
T ss_conf 588999999999998698275795799999974968999999998599889973984468----98------99999999
Q ss_pred HHHHCCCEEEECCCCC
Q ss_conf 6541562352078989
Q gi|254780438|r 188 LAQKMDLQINAGHDLT 203 (261)
Q Consensus 188 ~A~~lgL~VnAGHgLn 203 (261)
.|.+.|+.|-.-+|--
T Consensus 122 ~a~~~G~~V~~EvG~K 137 (251)
T 1qwg_A 122 RAKDNGFMVLTEVGKK 137 (251)
T ss_dssp HHHHTTCEEEEEECCS
T ss_pred HHHHCCCEEEECCCCC
T ss_conf 9985899895054578
No 42
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A*
Probab=89.37 E-value=1.3 Score=24.11 Aligned_cols=81 Identities=15% Similarity=0.084 Sum_probs=39.3
Q ss_pred HHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHH
Q ss_conf 99740661465112111024443564336668899987665415623520789898779999973699638842599999
Q gi|254780438|r 149 AAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAA 228 (261)
Q Consensus 149 ~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIs 228 (261)
...+.|+|.+++..|.|........... ....+....+.+.+.-+. -+|---+.+-...++++ ...+=|.+|-++|+
T Consensus 247 ~l~~~g~d~~~~s~~~~~~~~~~~~~~~-~~~~~~~~ik~~~~ipvi-~~G~i~~~e~ae~~l~~-g~~D~V~~gR~~ia 323 (349)
T 3hgj_A 247 RLKELGVDLLDCSSGGVVLRVRIPLAPG-FQVPFADAVRKRVGLRTG-AVGLITTPEQAETLLQA-GSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHTTCCEEEEECCCSCSSSCCCCCTT-TTHHHHHHHHHHHCCEEE-ECSSCCCHHHHHHHHHT-TSCSEEEESTHHHH
T ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCC-CCHHHHHHHHHHCCCCEE-EECCCCCHHHHHHHHHC-CCCCHHHHHHHHHH
T ss_conf 9987597516412564212434566764-336899999987599689-98893999999999987-99211598899986
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780438|r 229 TALE 232 (261)
Q Consensus 229 eAl~ 232 (261)
+-=+
T Consensus 324 dPdl 327 (349)
T 3hgj_A 324 DPYF 327 (349)
T ss_dssp CTTH
T ss_pred CHHH
T ss_conf 9069
No 43
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=89.04 E-value=1.4 Score=23.96 Aligned_cols=137 Identities=13% Similarity=0.086 Sum_probs=82.5
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECC---CCCCCC--CHHHHHHHHHHHCCCCCCCEEEEEE---------------CCCH-
Q ss_conf 899899999999749989998247---883348--8899999887400013674158883---------------4856-
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPR---PDQRHI--RYTDLPEIRRLIDEQFPKAELNIEG---------------YPNE- 81 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R---~DrRHI--~~~Dv~~l~~~~~~~~~~~elNiEg---------------~p~~- 81 (261)
+=++++++....+.|++|++.|.+ |.--.. +++.+..+++.+.+. .+++..+- +|++
T Consensus 32 ~~~~~d~~~~~~~lG~~~~~fHd~D~~P~~~~~~e~~~~~~~ik~~l~~~--Gl~~~~~T~nlf~~p~~~~Ga~TspD~~ 109 (386)
T 1muw_A 32 ALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDAT--GMTVPMATTNLFTHPVFKDGGFTANDRD 109 (386)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH--TCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred CCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCCCEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 98989999999981998797377756888998577799999999999963--9842130353246855357877895999
Q ss_pred ----------HHHHHHHHHCCCEEEEEECCCC---CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC----
Q ss_conf ----------8999998507212897101655---53335782213337889999986202696389972544441----
Q gi|254780438|r 82 ----------TFLNLCERYKPEQITLVPDDPH---QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE---- 144 (261)
Q Consensus 82 ----------e~i~ia~~ikP~qvtLVPe~r~---elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q---- 144 (261)
+.++++.+.--..+++.|-... ..+++-..-...-.+.|..+....++.|..+.+.|+|.|.+
T Consensus 110 vR~~Ai~~vk~aidiAa~LGa~~vvlw~G~eG~~~~~~~d~~~~~~~l~e~L~~v~dya~~~g~~v~~~IEpkP~EP~~~ 189 (386)
T 1muw_A 110 VRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGD 189 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
T ss_conf 99999999999999999949984897389777677665799999999999999999999972999469961367887644
Q ss_pred -------HHHHHHHHCCCC-EEEEC
Q ss_conf -------479999740661-46511
Q gi|254780438|r 145 -------HSLQAAKLTGAD-CIELY 161 (261)
Q Consensus 145 -------~~i~~a~~~Gad-~VElh 161 (261)
..+..+.++|-+ .+-++
T Consensus 190 ~~~~t~~~~l~~l~~~g~~~~vgln 214 (386)
T 1muw_A 190 ILLPTVGHALAFIERLERPELYGVN 214 (386)
T ss_dssp ESSCSHHHHHHHHTTSSSGGGEEEC
T ss_pred CCCCCHHHHHHHHHHCCCCCCEEEE
T ss_conf 0048999999999980986543477
No 44
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=88.26 E-value=0.51 Score=27.02 Aligned_cols=147 Identities=14% Similarity=0.150 Sum_probs=76.2
Q ss_pred CEEEEEECCCHHHHHHHHHHCCC--EEEE---EECCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEE----CC
Q ss_conf 41588834856899999850721--2897---1016555333578221333788999998620-2696389972----54
Q gi|254780438|r 71 AELNIEGYPNETFLNLCERYKPE--QITL---VPDDPHQLTSDHGWDFLQNQALLTKTVARLH-NLGSRISLFA----DG 140 (261)
Q Consensus 71 ~elNiEg~p~~e~i~ia~~ikP~--qvtL---VPe~r~elTTegGldv~~~~~~L~~~i~~l~-~~girvSLFI----Dp 140 (261)
+-+.|=|+--++|.+-+..+.+. .+=| -|-+ .-.-...|--+.++.+.+.++++.++ ..++.||+=+ |.
T Consensus 61 ~~~Ql~g~~~~~~~~aa~~~~~~~~~iDlN~GCP~~-~v~~~g~Ga~Ll~~p~~~~~iv~~~~~~~~~pvsvK~RlG~d~ 139 (318)
T 1vhn_A 61 VAVQIFGSEPNELSEAARILSEKYKWIDLNAGCPVR-KVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEK 139 (318)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTTCSEEEEEECCCCH-HHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSS
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHH-HHCCCCCCCCHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 689981689999999999851588476567478989-9766897313532537899997532111588421114127662
Q ss_pred CCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 44414799997406614651121110244435643366688999876654156235207898987799999736996388
Q gi|254780438|r 141 NGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEI 220 (261)
Q Consensus 141 d~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~Ev 220 (261)
+....-+....+.|++.+=+|.=.-...|..+.... .+.++ ..++.+-.| |=-.+++.....+. -...+=|
T Consensus 140 ~~~~~~~~~l~~~G~~~ltiH~Rt~~q~y~g~~~w~-~I~~~------k~~iPvi~N-GdI~s~~da~~~l~-~tg~dGV 210 (318)
T 1vhn_A 140 NEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWK-ALSVL------EKRIPTFVS-GDIFTPEDAKRALE-ESGCDGL 210 (318)
T ss_dssp CCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGG-GGGGS------CCSSCEEEE-SSCCSHHHHHHHHH-HHCCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEEHHCCCCCCCHHH-HHHHH------HCCCCCCCC-CCCCCHHHHHHHHH-HHCCCEE
T ss_conf 146799999998286467763000220677510167-89998------715861015-88699999999987-2389979
Q ss_pred EEHHHHH
Q ss_conf 4259999
Q gi|254780438|r 221 SVGHAFA 227 (261)
Q Consensus 221 sIGHaiI 227 (261)
-||-..+
T Consensus 211 MIGRgal 217 (318)
T 1vhn_A 211 LVARGAI 217 (318)
T ss_dssp EESGGGT
T ss_pred EECHHHH
T ss_conf 9717657
No 45
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum 3D7} SCOP: c.1.2.2
Probab=87.10 E-value=1.8 Score=23.15 Aligned_cols=203 Identities=11% Similarity=0.067 Sum_probs=118.8
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEEC-----CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 689989999999974998999824-----788334888999998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHP-----RPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~-----R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
++=++.+..+.+.++|+|.|-+-. =|.- -.-+..+..+++.... ..++..+-....+.+++...+ ....+
T Consensus 16 d~~~l~~~i~~l~~~g~d~iHiDImDG~Fvpn~-~~g~~~i~~l~~~~~~--~~~dvHLMv~~p~~~i~~~~~--~~~~~ 90 (227)
T 1tqx_A 16 NISKLAEETQRMESLGAEWIHLDVMDMHFVPNL-SFGPPVINNLKKYTKS--IFFDVHLMVEYPEKYVPLLKT--SNQLT 90 (227)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB-CCCHHHHHHHGGGCSS--CEEEEEEESSCGGGGGGGCTT--SSEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHCCCC--CCEEEEEEECCHHHHCHHHHC--CCCEE
T ss_conf 999999999999974999899966049676765-5288999766532788--766899841674651546642--57505
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH-CCCCEEEECCC---CCHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974-06614651121---110244435
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL-TGADCIELYTG---PYGACYNNP 172 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~-~Gad~VElhTG---~Ya~a~~~~ 172 (261)
+.-+.. ..+.......++.+++.|+++.+=+.|+.....+..... -.+|.|=+-|- -....|
T Consensus 91 i~~~~~-----------~~~~~~~~~~i~~i~~~g~~~Glal~p~t~~~~~~~~l~~~~iD~vl~m~V~PGf~GQ~f--- 156 (227)
T 1tqx_A 91 FHFEAL-----------NEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSF--- 156 (227)
T ss_dssp EEGGGG-----------TTCHHHHHHHHHHHHTTTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCC---
T ss_pred EEEEEC-----------CCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCC---
T ss_conf 898311-----------452130999999998649747331489999899875540043257999984136787434---
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64336668899987665415623520789898779999973699638842599999999940999999999999741056
Q gi|254780438|r 173 QQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDN 252 (261)
Q Consensus 173 ~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~ 252 (261)
...-++|+++.-+...+ +.+-+-=|.|.+|+..+. + -+.+-+-.|-+|... -..+++++++++.+++...|
T Consensus 157 --~~~~l~kI~~lr~~~~~--~~I~VDGGIn~e~i~~l~-~-~Gad~~V~GSaif~~---~d~~~~i~~lr~~~~k~~~~ 227 (227)
T 1tqx_A 157 --MHDMMGKVSFLRKKYKN--LNIQVDGGLNIETTEISA-S-HGANIIVAGTSIFNA---EDPKYVIDTMRVSVQKYLNN 227 (227)
T ss_dssp --CGGGHHHHHHHHHHCTT--CEEEEESSCCHHHHHHHH-H-HTCCEEEESHHHHTC---SSHHHHHHHHHHHHHHC---
T ss_pred --CCHHHHHHHHHHHHCCC--CEEEEECCCCHHHHHHHH-H-CCCCEEEECHHHHCC---CCHHHHHHHHHHHHHHHHCC
T ss_conf --61267899999983799--769998568889999999-8-399999965698789---99999999999999998549
No 46
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=86.19 E-value=1.2 Score=24.52 Aligned_cols=212 Identities=14% Similarity=0.090 Sum_probs=96.6
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCC-CHHHHHHHHHHHCCCCCCCE-EEEEECC---------------CHHHH
Q ss_conf 6899899999999749989998247883348-88999998874000136741-5888348---------------56899
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHI-RYTDLPEIRRLIDEQFPKAE-LNIEGYP---------------NETFL 84 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI-~~~Dv~~l~~~~~~~~~~~e-lNiEg~p---------------~~e~i 84 (261)
...++.++.+.+-++|-+||=+...+-.... ...++..+++.+... +++ .++.... ....+
T Consensus 34 ~~~~lee~l~~aae~GfdgVEl~~~~~~~~~~~~~~~~~l~~~l~~~--GL~i~~i~~~~~~~~~~~~~~~~~~~~~~~i 111 (296)
T 2g0w_A 34 TEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEH--NMKVTEVEYITQWGTAEDRTAEQQKKEQTTF 111 (296)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHT--TCEEEEEECBCCCSSTTTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHC--CCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999697999974532300044689999999999971--9979998655455787078999999999999
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH----HHHHHHHCCCCEEEE
Q ss_conf 9998507212897101655533357822133378899999862026963899725444414----799997406614651
Q gi|254780438|r 85 NLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEH----SLQAAKLTGADCIEL 160 (261)
Q Consensus 85 ~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~----~i~~a~~~Gad~VEl 160 (261)
+++..+.-..+...+.. .++.....+.|+....... +.++.+...|..... .++....++.+.+=+
T Consensus 112 ~~a~~lg~~~v~~~~~~--------~~~~~~~~~~l~~l~~~A~--~~gi~l~~~~~~~v~t~~~~~~l~~~v~~~~~g~ 181 (296)
T 2g0w_A 112 HMARLFGVKHINCGLLE--------KIPEEQIIVALGELCDRAE--ELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQL 181 (296)
T ss_dssp HHHHHHTCCEEEECCCS--------CCCHHHHHHHHHHHHHHHT--TSEEEEECCTTSSSCSHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHCCCEEEECCCC--------CHHHHHHHHHHHHHHHHHH--CCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf 99997199989647998--------1178999999999999834--6856999705777899999999998537654236
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---------------CCCEEEECCC-CCHHHHHHHHHHCCC----C-
Q ss_conf --1211102444356433666889998766541---------------5623520789-898779999973699----6-
Q gi|254780438|r 161 --YTGPYGACYNNPQQERIFLNKLAITAQLAQK---------------MDLQINAGHD-LTIQNIPNLINAIPY----I- 217 (261)
Q Consensus 161 --hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~---------------lgL~VnAGHg-Ln~~Nl~~~i~~Ip~----I- 217 (261)
=|+.+...-...... ++.+..-..+.+- ..-.+--|+| +++.-+-..+.++.+ +
T Consensus 182 ~~D~~H~~~~g~~~~~~---~~~~~~~i~~vHikD~~~~~~~~~~~~~~~~r~~pG~G~id~~~~~~~L~~~GY~G~~is 258 (296)
T 2g0w_A 182 ICDTWHWARANQTAESI---KNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMG 258 (296)
T ss_dssp EEEHHHHHHTTCCGGGG---TTCCGGGEEEEEECBCCSSCCSSHHHHHHHBCBCTTSSSSCHHHHHHHHHHHTCCCSCEE
T ss_pred EECCHHHHHCCCCHHHH---HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf 40517987458999999---985213176999835767765422113323776898975589999999998399988799
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38842599999999940999999999999741
Q gi|254780438|r 218 SEISVGHAFAATALECGVKEAVFCFRRACGQH 249 (261)
Q Consensus 218 ~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~ 249 (261)
-|+- +-.........-..++...+++++.+.
T Consensus 259 lE~~-~~~~~~~~~~~~a~~~~~~~~~~l~~a 289 (296)
T 2g0w_A 259 VEVI-SDSMVATGLEYAALKVYNATKKVLDEA 289 (296)
T ss_dssp ECCC-BHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEC-CHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9946-802430899999999999999999986
No 47
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling protein; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=85.71 E-value=1.9 Score=23.06 Aligned_cols=109 Identities=13% Similarity=0.206 Sum_probs=68.7
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE--EECCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 507212897101655533357822133378899999862026963899--725444414799997406614651121110
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL--FADGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL--FIDpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
.+.|.+++| |+| |. .+..+...+...+..|++.|++++| |=.. ..++.....+.+|.|-|.- .|.
T Consensus 271 ~l~p~~Lvl------EIt-E~--~~~~~~~~~~~~l~~Lr~~G~~ialDDFG~g---~ssl~~L~~l~~d~IKID~-~~v 337 (413)
T 3gfz_A 271 GLRPDQVLI------EVT-ET--EVITCFDQFRKVLKALRVAGMKLAIDDFGAG---YSGLSLLTRFQPDKIKVDA-ELV 337 (413)
T ss_dssp TCCGGGEEE------EEE-HH--HHHTCSTTHHHHHHHHHHHTCEEEEEEETSS---SCSHHHHTTCCCSEEEECH-HHH
T ss_pred CCCHHHEEE------EEC-CC--CHHHHHHHHHHHHHHHHCCCCCEEECCCCCC---CHHHHHHHHCCCCEEEECH-HHH
T ss_conf 949789689------820-55--0436578898887755315874354477887---0358999857999899878-997
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 244435643366688999876654156235207898987799999736
Q gi|254780438|r 167 ACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAI 214 (261)
Q Consensus 167 ~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~I 214 (261)
.......... .-++....+|+++|+.|-|-.==+-+-+.. +..+
T Consensus 338 ~~i~~~~~~~---~~v~~iv~la~~lgi~vIAEGVEt~~~~~~-l~~l 381 (413)
T 3gfz_A 338 RDIHISGTKQ---AIVASVVRCCEDLGITVVAEGVETLEEWCW-LQSV 381 (413)
T ss_dssp TTTTTBHHHH---HHHHHHHHHHHHHTCEEEEECCCSHHHHHH-HHHT
T ss_pred HCCCCCHHHH---HHHHHHHHHHHHCCCEEEEEECCCHHHHHH-HHHC
T ss_conf 3203595579---999999999998499899981892999999-9976
No 48
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis}
Probab=85.42 E-value=2.2 Score=22.58 Aligned_cols=188 Identities=14% Similarity=0.044 Sum_probs=106.1
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCC-CCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf 98999999997499899982478833488899999887400013-67415888348568999998507212897101655
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQF-PKAELNIEGYPNETFLNLCERYKPEQITLVPDDPH 103 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~-~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~ 103 (261)
+.+.-...+.+.|++.|- +|+. ....++...+...+.... .+.+|=|- .-+++|..+..+-
T Consensus 30 ~~l~~i~~~~~~gv~~iq--lR~K--~~~~~e~~~l~~~l~~~~~~~~~liIn-----d~~~lA~~~~adG--------- 91 (221)
T 1yad_A 30 EELARIIITIQNEVDFIH--IRER--SKSAADILKLLDLIFEGGIDKRKLVMN-----GRVDIALFSTIHR--------- 91 (221)
T ss_dssp HHHHHHHHHHGGGCSEEE--ECCT--TSCHHHHHHHHHHHHHTTCCGGGEEEE-----SCHHHHHTTTCCE---------
T ss_pred HHHHHHHHHHHCCCCEEE--ECCC--CCCHHHHHHHHHHHHHHHCCCCEEEEE-----CCHHHHHHCCCCE---------
T ss_conf 999999999978998999--7689--979999999999999861769859996-----9799998649988---------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 53335782213337889999986202696389972544441479999740661465112111024443564336668899
Q gi|254780438|r 104 QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLA 183 (261)
Q Consensus 104 elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~ 183 (261)
+-+.++.-.....-..+. +..++.-.. +.++ +..|.+.|+|.|=+ ||+-....++.....-++.++
T Consensus 92 -------vHlg~~d~~~~~~r~~~~--~~iIG~S~h-~~~e--~~~a~~~gaDYi~~--gpif~T~tK~~~~~~g~~~l~ 157 (221)
T 1yad_A 92 -------VQLPSGSFSPKQIRARFP--HLHIGRSVH-SLEE--AVQAEKEDADYVLF--GHVFETDCKKGLEGRGVSLLS 157 (221)
T ss_dssp -------EEECTTSCCHHHHHHHCT--TCEEEEEEC-SHHH--HHHHHHTTCSEEEE--ECCC----------CHHHHHH
T ss_pred -------EECCCCCCCHHHHHHHCC--CCEEEEECC-CHHH--HHHHHHCCCCEEEE--CCCCCCCCCCCCHHHHHHHHH
T ss_conf -------841557668999986454--878985444-5999--99998659997830--677666666531033678887
Q ss_pred HHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 987665415623520789898779999973699638842599999999940999999999999741056
Q gi|254780438|r 184 ITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDN 252 (261)
Q Consensus 184 ~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~ 252 (261)
+++...++-|-|=-|+|.+|+..+++ -+.+=|-++-+|... ---.+++++|++.+++.++.
T Consensus 158 ---~~~~~~~~PvvAiGGI~~~ni~~~~~--~Ga~gvav~s~I~~~---~dp~~~~~~~~~~l~e~r~~ 218 (221)
T 1yad_A 158 ---DIKQRISIPVIAIGGMTPDRLRDVKQ--AGADGIAVMSGIFSS---AEPLEAARRYSRKLKEMRYE 218 (221)
T ss_dssp ---HHHHHCCSCEEEESSCCGGGHHHHHH--TTCSEEEESHHHHTS---SSHHHHHHHHHHHHHHHC--
T ss_pred ---HHHHCCCCCEEEECCCCHHHHHHHHH--CCCCEEEEEHHHHCC---CCHHHHHHHHHHHHHHHHHH
T ss_conf ---64003567679867989999999998--099889984999779---99999999999999999863
No 49
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2, protein structure initiative; 2.00A {Listeria monocytogenes}
Probab=84.95 E-value=2.3 Score=22.44 Aligned_cols=135 Identities=19% Similarity=0.176 Sum_probs=78.4
Q ss_pred CCCCCEEEEEECC----CHHHHHHHHHHC--CCEEEE-EECCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEE--
Q ss_conf 1367415888348----568999998507--212897-101655533357-822133378899999862026963899--
Q gi|254780438|r 67 QFPKAELNIEGYP----NETFLNLCERYK--PEQITL-VPDDPHQLTSDH-GWDFLQNQALLTKTVARLHNLGSRISL-- 136 (261)
Q Consensus 67 ~~~~~elNiEg~p----~~e~i~ia~~ik--P~qvtL-VPe~r~elTTeg-Gldv~~~~~~L~~~i~~l~~~girvSL-- 136 (261)
.+++..+.+-..| .++|.....+.. |.+.++ +.|..-+++-+. -++...+...+...++.|++.|++++|
T Consensus 69 ~~~~~~l~iNls~~~l~~~~~~~~l~~~~~~~~~l~lEi~E~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~ialDd 148 (235)
T 3kzp_A 69 KYPNDRFAINIAPQQLFYIETLHWLDKLKSESHRITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDD 148 (235)
T ss_dssp HSTTSCEEEEECGGGGGSHHHHHHHHHTGGGGGGEEEEECCCCCCCCGGGTTSCHHHHHHHHHHHHHHHHHTTCEEEECS
T ss_pred HHCCCEEEEEECHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
T ss_conf 51465299994799963858889999860442102333106776241012123322049999999999997699688525
Q ss_pred EECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHH
Q ss_conf 72544441479999740661465112111024443564336668899987665415623520789898779
Q gi|254780438|r 137 FADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNI 207 (261)
Q Consensus 137 FIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl 207 (261)
|-... . ++.....+.+|.|.|.-.-......+..... .-++....+|+++|+.|=|-.==|.+-+
T Consensus 149 fG~g~-~--~~~~l~~l~~d~iKid~~~~~~~~~~~~~~~---~~v~~i~~~a~~~~~~vIaegVEt~~~~ 213 (235)
T 3kzp_A 149 VSCGL-N--SLERVMSYLPYIIEIKFSLIHFKNIPLEDLL---LFIKAWANFAQKNKLDFVVEGIETKETM 213 (235)
T ss_dssp TTSTT-C--CHHHHHHHGGGCSEEEEEGGGGTTSCHHHHH---HHHHHHHHHHHHTTCEEEEEEECSTHHH
T ss_pred CCCCC-C--CHHHHHHCCCCEECCCHHHHHHHCCCCHHHH---HHHHHHHHHHHHCCCEEEEEECCCHHHH
T ss_conf 79874-1--0778852798676141567765302311268---9999999999986998999718959999
No 50
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, glycerol complex; 1.30A {Thermus thermophilus HB8} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=84.64 E-value=2.4 Score=22.35 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=74.2
Q ss_pred HHCCCCCCCCHHHHHHHHHHCCCCEEE--EECCCCCC----C--------CCHHHHHHHHH----------HH--CCCCC
Q ss_conf 220788689989999999974998999--82478833----4--------88899999887----------40--00136
Q gi|254780438|r 16 RNRRNLPWPNLVHIGKIALQSGASGLT--VHPRPDQR----H--------IRYTDLPEIRR----------LI--DEQFP 69 (261)
Q Consensus 16 RnaRg~~~P~~~~~a~~~~~~GadgIT--vH~R~DrR----H--------I~~~Dv~~l~~----------~~--~~~~~ 69 (261)
|-+.+..-.|=+.+-..|.+.|||+|= |++--|.. | +.+.++.+|.. ++ ...++
T Consensus 14 RG~~~~~pENT~~af~~A~~~G~~~iE~Dv~~TkDg~~Vv~HD~~~~r~~~~~~~~~el~~~~~~iptl~e~l~~~~~~~ 93 (224)
T 1vd6_A 14 RGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTPLGPVFQVDYADLKAQEPDLPRLEEVLALKEAFP 93 (224)
T ss_dssp TSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEETTEEGGGSCHHHHHHHSTTCCBHHHHHGGGGTCT
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf 99999998316999999998597989998889159985314654136650333069997530157896899999997488
Q ss_pred CCEEEEEECCCHH----HHHH-HHHHCC-CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 7415888348568----9999-985072-128971016555333578221333788999998620269638997254444
Q gi|254780438|r 70 KAELNIEGYPNET----FLNL-CERYKP-EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN 143 (261)
Q Consensus 70 ~~elNiEg~p~~e----~i~i-a~~ikP-~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~ 143 (261)
++.+|+|.-..+. ++.. +..++- ++|.+ . +-+...+..+. .+ ..++++++.++.+..
T Consensus 94 ~~~~~ieiK~~~~~~~~~~~~~~~~~~~~~~v~i-----------~----Sf~~~~l~~~~-~~-~p~~~~~~l~~~~~~ 156 (224)
T 1vd6_A 94 QAVFNVELKSFPGLGEEAARRLAALLRGREGVWV-----------S----SFDPLALLALR-KA-APGLPLGFLMAEDHS 156 (224)
T ss_dssp TCEEEEEECCCTTSHHHHHHHHHHHTTTCSSEEE-----------E----ESCHHHHHHHH-HH-CTTSCEEEEESSCCG
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEE-----------C----CCCHHHHHHHH-HH-CCCCCEEEEECCCHH
T ss_conf 7056666226731137889999999875224453-----------2----67689999999-87-988519998522212
Q ss_pred CHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 14799997406614651121110244435643366688999876654156235207
Q gi|254780438|r 144 EHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAG 199 (261)
Q Consensus 144 q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAG 199 (261)
..+..+|++.|-++-... ++ .....+++.|+.|++-
T Consensus 157 ----~~~~~~~~~~i~~~~~~~-----~~-----------~~v~~~~~~g~~V~~w 192 (224)
T 1vd6_A 157 ----ALLPCLGVEAVHPHHALV-----TE-----------EAVAGWRKRGLFVVAW 192 (224)
T ss_dssp ----GGGGGSCCSEEEEBGGGC-----CH-----------HHHHHHHHTTCEEEEE
T ss_pred ----HCCCCCCCEEEEECCCCC-----CH-----------HHHHHHHHCCCEEEEE
T ss_conf ----103445751897222224-----48-----------9999999869999998
No 51
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=83.80 E-value=2.6 Score=22.11 Aligned_cols=177 Identities=11% Similarity=0.096 Sum_probs=104.7
Q ss_pred HHHHHCCCCCCC-------CHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
Q ss_conf 223220788689-------9899999999749989998-24788334888999998874000136741588834856899
Q gi|254780438|r 13 AVLRNRRNLPWP-------NLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFL 84 (261)
Q Consensus 13 AtLRnaRg~~~P-------~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i 84 (261)
.|||. |+..| +-++.++...++|.+-|-+ +|+-- +.|-...+.+.... .+...---.-+..+-+
T Consensus 45 tTLRD--G~Q~~g~~fs~e~K~~i~~~L~~~GV~~IEvG~p~~~-----~~~~~~~~~i~~~~-~~~~~~~~~r~~~~d~ 116 (423)
T 3ivs_A 45 STLRE--GEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPVAS-----EQSRQDCEAICKLG-LKCKILTHIRCHMDDA 116 (423)
T ss_dssp CTTTG--GGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSC-----HHHHHHHHHHHTSC-CSSEEEEEEESCHHHH
T ss_pred CCCCC--CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC-----HHHHHHHHHHHHHC-CHHHHHHHHHCCHHHH
T ss_conf 89753--2669999989999999999999819798999668478-----36799999998704-6035355464380769
Q ss_pred HHHHHHCCCEEE-EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHHHHCCCCE
Q ss_conf 999850721289-7101655533357822133378899999862026963899725------444414799997406614
Q gi|254780438|r 85 NLCERYKPEQIT-LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAAKLTGADC 157 (261)
Q Consensus 85 ~ia~~ikP~qvt-LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a~~~Gad~ 157 (261)
+.+.+...+.+. ++|-.........|++.....+.+.+.++.+++.|++|++.+. ++.-.+.++.+.+.|+|+
T Consensus 117 ~~a~~~g~~~v~i~~~~s~~~~~~~~~~~~~~~l~~~~~~v~~ak~~G~~V~~~~ed~~~~~~~~l~~~~~~~~~~Gad~ 196 (423)
T 3ivs_A 117 RVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNR 196 (423)
T ss_dssp HHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSE
T ss_pred HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 99998698968998545299999986212999999999999887505861112014455776899999998876139871
Q ss_pred EEECCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCEEEECC--CCCHHH
Q ss_conf 6511211102444--356433666889998766541562352078--989877
Q gi|254780438|r 158 IELYTGPYGACYN--NPQQERIFLNKLAITAQLAQKMDLQINAGH--DLTIQN 206 (261)
Q Consensus 158 VElhTG~Ya~a~~--~~~~~~~el~~i~~aa~~A~~lgL~VnAGH--gLn~~N 206 (261)
|-| |+... .+.+....++.++ -.....|++|+=- ||-.-|
T Consensus 197 i~l-----aDT~G~~~P~~v~~~i~~l~----~~~~~~lg~H~HNd~GlA~AN 240 (423)
T 3ivs_A 197 VGI-----ADTVGCATPRQVYDLIRTLR----GVVSCDIECHFHNDTGMAIAN 240 (423)
T ss_dssp EEE-----EETTSCCCHHHHHHHHHHHH----HHCSSEEEEEEBCTTSCHHHH
T ss_pred CCC-----CCCCCCCCCHHHHEEEEECC----CCCCCCEEEEECCCCCCHHHH
T ss_conf 354-----56546627300000133114----665552489878985609999
No 52
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix bundle (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=83.43 E-value=2.5 Score=22.28 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=62.7
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE-ECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 998247883348889999988740001367415888-3485689999985072128971016555333578221333788
Q gi|254780438|r 41 LTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIE-GYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQAL 119 (261)
Q Consensus 41 ITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiE-g~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~ 119 (261)
|.+-.=|...|---.-+ +..++...=-++ .++- ..|.++|++.+.+.+|+.++|== -+..+...
T Consensus 126 vv~~t~~gd~H~lG~~~--va~~l~~~G~~V-~~LG~~~p~e~i~~~v~~~~~d~vglS~------------~l~~~l~~ 190 (258)
T 2i2x_B 126 VVCHVAEGDVHDIGKNI--VTALLRANGYNV-VDLGRDVPAEEVLAAVQKEKPIMLTGTA------------LMTTTMYA 190 (258)
T ss_dssp EEEEECTTCCCCHHHHH--HHHHHHHTTCEE-EEEEEECCSHHHHHHHHHHCCSEEEEEC------------CCTTTTTH
T ss_pred EEEECCCCCCCHHHHHH--HHHHHHHCCCEE-EECCCCCCHHHHHHHHHHHCCCEEEEEC------------CCCCCHHH
T ss_conf 89837999801789999--999999879938-9789989999999999982999899941------------55676799
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCE
Q ss_conf 99999862026963899725444414799997406614
Q gi|254780438|r 120 LTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADC 157 (261)
Q Consensus 120 L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~ 157 (261)
++.+++.|++.|.++-+++---+- +=+.+.++|||.
T Consensus 191 ~~~~i~~l~~~~~~~~iivGGa~~--~~~~a~~~gaD~ 226 (258)
T 2i2x_B 191 FKEVNDMLLENGIKIPFACGGGAV--NQDFVSQFALGV 226 (258)
T ss_dssp HHHHHHHHHTTTCCCCEEEESTTC--CHHHHHTSTTEE
T ss_pred HHHHHHHHHHCCCCCCEEEECCCC--CHHHHHHHCCCE
T ss_conf 999999999749999489889879--999999829884
No 53
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=80.85 E-value=3.3 Score=21.38 Aligned_cols=163 Identities=13% Similarity=0.073 Sum_probs=88.0
Q ss_pred HHHHHHHHHCCCCEEEEECC-CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC-HHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 99999999749989998247-8833488899999887400013674158883485-689999985072128971016555
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPR-PDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN-ETFLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R-~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~-~e~i~ia~~ikP~qvtLVPe~r~e 104 (261)
.+-|..|.++|||-|=+-.- .-.|+|..+.+..|.+.+... -...=+=.+++ +++.+++....++.+-|-=+..
T Consensus 11 ~~d~~~~~~~gad~iGfif~~~SpR~v~~~~a~~i~~~~~~~--~~~V~Vf~~~~~~~i~~~~~~~~~d~vQlHg~e~-- 86 (203)
T 1v5x_A 11 LEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPF--VVRVGVFRDQPPEEVLRLMEEARLQVAQLHGEEP-- 86 (203)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSS--SEEEEEESSCCHHHHHHHHHHTTCSEEEECSCCC--
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCC--
T ss_conf 999999982799989998279989977999999999861798--5399997765089999998715986544269879--
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 33357822133378899999862026963899725444414799997406614651121110244435643366688999
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAI 184 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~ 184 (261)
. ..++.++..--.+..|-..+... .+. .+..+|.+=+-++....- ......+....
T Consensus 87 ------------~----~~~~~l~~~~~iik~~~~~~~~~--~~~-~~~~~~~~L~D~~~~g~g----~~~~~~~~~~~- 142 (203)
T 1v5x_A 87 ------------P----EWAEAVGRFYPVIKAFPLEGPAR--PEW-ADYPAQALLLDGKRPGSG----EAYPRAWAKPL- 142 (203)
T ss_dssp ------------H----HHHHHHTTTSCEEEEEECSSSCC--GGG-GGSSCSEEEEECSSTTSC----CCCCGGGGHHH-
T ss_pred ------------H----HHHHHHHHCCCCCEEECCCCHHH--HHH-HHHHHHHEEECCCCCCCC----CCCCHHHHHHH-
T ss_conf ------------8----99999862288214753585556--887-521156414213345767----66667877645-
Q ss_pred HHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 87665415623520789898779999973699638842
Q gi|254780438|r 185 TAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISV 222 (261)
Q Consensus 185 aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsI 222 (261)
...+..+=-+=|||-+|+..+++--|.--.||=
T Consensus 143 -----~~~~~p~~LAGGl~~~NV~~~~~~~p~gvDvsS 175 (203)
T 1v5x_A 143 -----LATGRRVILAGGIAPENLEEVLALRPYALDLAS 175 (203)
T ss_dssp -----HHTTSCEEECSSCCSTTHHHHHHHCCSEEEESG
T ss_pred -----HHHHCCEEEECCCCHHHHHHHHHCCCCEEEECC
T ss_conf -----663187899888897999999966998899768
No 54
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=80.62 E-value=3.4 Score=21.32 Aligned_cols=127 Identities=17% Similarity=0.152 Sum_probs=56.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCC-------CCEEEEE--ECCCCC-CHH---HHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 5533357822133378899999862026-------9638997--254444-147---99997406614651121110244
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNL-------GSRISLF--ADGNGN-EHS---LQAAKLTGADCIELYTGPYGACY 169 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~-------girvSLF--IDpd~~-q~~---i~~a~~~Gad~VElhTG~Ya~a~ 169 (261)
+..|-+-|=++.....++.++++..++. ++|.|-+ ++...+ +.. .+...+.|+|.++...|.|....
T Consensus 177 N~R~D~yGGs~enR~Rf~~eii~~ir~~~g~~~~v~~Ris~~~~~~~~~~~~~~~~~~~~l~~~g~d~~~~~~g~~~~~~ 256 (671)
T 1ps9_A 177 NQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARI 256 (671)
T ss_dssp CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
T ss_conf 87777667687777688999999998761998538884264112578998899999999999848720212235544567
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 4356--4336668899987665415623520-7898987799999736996388425999999999
Q gi|254780438|r 170 NNPQ--QERIFLNKLAITAQLAQKMDLQINA-GHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 170 ~~~~--~~~~el~~i~~aa~~A~~lgL~VnA-GHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
.... .....+..+.. ......++-|-+ |---+.+-....++. ...+=|.+|-++|++-=+
T Consensus 257 ~~~~~~~~~~~~~~~~~--~~~~~~~~pvi~~g~~~~~~~ae~~l~~-g~~D~v~~gR~~iadPd~ 319 (671)
T 1ps9_A 257 PTIATPVPRGAFSWVTR--KLKGHVSLPLVTTNRINDPQVADDILSR-GDADMVSMARPFLADAEL 319 (671)
T ss_dssp CSSSTTSCTTTTHHHHH--HHTTSCSSCEEECSSCCSHHHHHHHHHT-TSCSEEEESTHHHHCTTH
T ss_pred CCCCCCCCCHHHHHHHH--HHHCCCCCCEEEECCCCCHHHHHHHHHC-CCCCEEECCHHHHHCCHH
T ss_conf 65567664115699999--9851443347971787778999999977-998866004597719468
No 55
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=80.52 E-value=3.4 Score=21.30 Aligned_cols=127 Identities=19% Similarity=0.187 Sum_probs=71.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCC-------CCEEEEEE--CCC---CC--CHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 55533357822133378899999862026-------96389972--544---44--147999974066146511211102
Q gi|254780438|r 102 PHQLTSDHGWDFLQNQALLTKTVARLHNL-------GSRISLFA--DGN---GN--EHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 102 r~elTTegGldv~~~~~~L~~~i~~l~~~-------girvSLFI--Dpd---~~--q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
-+..|-|-|=++.....++.++++.+++. ++|.|.-= +++ .+ ...++...+.|+|.+++..|.+..
T Consensus 193 ~N~RtDeYGGs~enR~Rf~~Eii~air~~~g~~~~i~~R~~~~~~~~~~g~~~~e~~~~~~~l~~~gvD~i~vs~G~~~~ 272 (363)
T 3l5l_A 193 SNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIP 272 (363)
T ss_dssp TCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 89986878888456067899999999986266774021057323578898648899999999986187679985473226
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 44435643366688999876654156235207898-987799999736996388425999999999
Q gi|254780438|r 168 CYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 168 a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
....... ......+.+..+.+.+. -|-+.-++ +.+.....++. ...+=|.+|-++|++-=+
T Consensus 273 ~~~~~~~-~~~~~~~a~~ik~~~~~--pvi~~G~i~~~~~ae~~l~~-g~~D~V~~gR~~iadPd~ 334 (363)
T 3l5l_A 273 DTNIPWG-PAFMGPIAERVRREAKL--PVTSAWGFGTPQLAEAALQA-NQLDLVSVGRAHLADPHW 334 (363)
T ss_dssp CCCCCCC-TTTTHHHHHHHHHHHTC--CEEECSSTTSHHHHHHHHHT-TSCSEEECCHHHHHCTTH
T ss_pred CCCCCCC-CCCHHHHHHHHHHHCCC--EEEEECCCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCCH
T ss_conf 7666667-42005799999986593--08997786999999999987-995234751998869149
No 56
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=80.42 E-value=3.4 Score=21.28 Aligned_cols=68 Identities=21% Similarity=0.221 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE--EEEEEC-CCCCCHHHHHHHHCCC
Q ss_conf 8568999998507212897101655533357822133378899999862026963--899725-4444147999974066
Q gi|254780438|r 79 PNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSR--ISLFAD-GNGNEHSLQAAKLTGA 155 (261)
Q Consensus 79 p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~gir--vSLFID-pd~~q~~i~~a~~~Ga 155 (261)
|.++|++.|.+.+|+.|.+- .+-|.++ .+...++.+++.|++.|++ +-+.+- |-.+ -+.++++|+
T Consensus 168 p~ee~v~~a~e~~aD~VgvS-----~llt~~~----~h~~~~~~li~~l~e~gl~~~v~vivGG~~~~---~~~a~~lGa 235 (262)
T 1xrs_B 168 ANEDFIKKAVELEADVLLVS-----QTVTQKN----VHIQNMTHLIELLEAEGLRDRFVLLCGGPRIN---NEIAKELGY 235 (262)
T ss_dssp CHHHHHHHHHHTTCSEEEEE-----CCCCTTS----HHHHHHHHHHHHHHHTTCGGGSEEEEECTTCC---HHHHHTTTC
T ss_pred CHHHHHHHHHHCCCCEEEEE-----EECCCCH----HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC---HHHHHHCCC
T ss_conf 99999999986499999997-----5215523----37899999999999669988958999899899---999997799
Q ss_pred CEE
Q ss_conf 146
Q gi|254780438|r 156 DCI 158 (261)
Q Consensus 156 d~V 158 (261)
|++
T Consensus 236 Dav 238 (262)
T 1xrs_B 236 DAG 238 (262)
T ss_dssp SEE
T ss_pred CEE
T ss_conf 887
No 57
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=79.99 E-value=3.6 Score=21.19 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=96.0
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECC----CCCCC-CCHHHHHHHHHHHCCCCCCCEEEEE-----ECC----------CH-
Q ss_conf 899899999999749989998247----88334-8889999988740001367415888-----348----------56-
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPR----PDQRH-IRYTDLPEIRRLIDEQFPKAELNIE-----GYP----------NE- 81 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R----~DrRH-I~~~Dv~~l~~~~~~~~~~~elNiE-----g~p----------~~- 81 (261)
..++.++.....+.|+.+++.|=+ +|.-. -..+.+..+++.+... .++++.- ..| ++
T Consensus 32 ~~d~~~a~~~~~~lG~~~~~fHD~D~~p~~~~~~e~~~~~~~~k~~~~~~--Gl~l~~~t~nlf~~p~y~~Ga~TnPD~~ 109 (394)
T 1xla_A 32 NLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDT--GLKVPMVTTNLFSHPVFKDGGFTSNDRS 109 (394)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHH--CCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred CCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH--CCEEEEECCCCCCCCCCCCCCCCCCCHH
T ss_conf 99999999999981998782242334778898788999999999999970--9844254266567833026776695999
Q ss_pred ----------HHHHHHHHHCCCEEEEEECCCC---CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC----
Q ss_conf ----------8999998507212897101655---53335782213337889999986202696389972544441----
Q gi|254780438|r 82 ----------TFLNLCERYKPEQITLVPDDPH---QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE---- 144 (261)
Q Consensus 82 ----------e~i~ia~~ikP~qvtLVPe~r~---elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q---- 144 (261)
+.++++.+.--..+++-|-... -.+++-..-.....+.|..++....+.|..+-++|+|-|.+
T Consensus 110 VR~~Ai~~~k~~idia~~LGa~~~vlW~GrdG~~~~~~~d~~~~~d~l~e~l~~v~~~a~~~g~~~~i~IEpKP~EP~~~ 189 (394)
T 1xla_A 110 IRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPKPNEPRGD 189 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCC
T ss_conf 99999999999999999958981787268764357776699999999999999999999861988448843456787644
Q ss_pred -------HHHHHHHHCCCCE---EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf -------4799997406614---651121110244435643366688999876654156235207898
Q gi|254780438|r 145 -------HSLQAAKLTGADC---IELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL 202 (261)
Q Consensus 145 -------~~i~~a~~~Gad~---VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL 202 (261)
..+....++|-+. |=+=||+--- ...... ..+..+....+-.++-+|-+.++
T Consensus 190 ~~~~d~~~~l~fl~~~~~~~~vgvnlD~gH~~l---ag~n~~---~~va~a~~~gkLg~ihlNd~~~~ 251 (394)
T 1xla_A 190 IFLPTVGHGLAFIEQLEHGDIVGLNPETGHEQM---AGLNFT---HGIAQALWAEKLFHIDLNGQRGI 251 (394)
T ss_dssp ESSCSHHHHHHHHTTCTTGGGEEECCBHHHHHT---TTCCHH---HHHHHHHHTTCBCCCEECBCCSS
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC---CCCCHH---HHHHHHHHCCCEEEEEECCCCCC
T ss_conf 435878999999998088531204103675233---578838---99999986495778973799998
No 58
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans}
Probab=79.85 E-value=3.6 Score=21.16 Aligned_cols=169 Identities=13% Similarity=0.043 Sum_probs=92.1
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEC---CCCCCCCCHHHHH-HHHHHHCCCCCCCEEEEEECCC----HHHH
Q ss_conf 223220788689989999999974998999824---7883348889999-9887400013674158883485----6899
Q gi|254780438|r 13 AVLRNRRNLPWPNLVHIGKIALQSGASGLTVHP---RPDQRHIRYTDLP-EIRRLIDEQFPKAELNIEGYPN----ETFL 84 (261)
Q Consensus 13 AtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~---R~DrRHI~~~Dv~-~l~~~~~~~~~~~elNiEg~p~----~e~i 84 (261)
..+...-+.-.=|++..|+.+++.|||-|.+.. ||+-.-+..+... .++.++. . -+.|+-+-+.-. ++.+
T Consensus 63 ~~~~~~~~~~~~d~v~~Ak~~ve~GADiIdIg~~StrPg~~~vs~eee~~rV~~V~~-~-v~~pl~i~~~~~d~~d~~v~ 140 (310)
T 2h9a_B 63 DILVEPFKDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVAD-A-IDVPLMIIGCGVEEKDAEIF 140 (310)
T ss_dssp HHHHGGGTTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHH-H-CSSCEEEECCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-H-HCCCEEEECCCHHHHHHHHH
T ss_conf 999999877777699999999972998899715118999887899999999999999-8-68980742342446649999
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC--CHHHHHHHHCCC--CEEEE
Q ss_conf 99985072128971016555333578221333788999998620269638997254444--147999974066--14651
Q gi|254780438|r 85 NLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGN--EHSLQAAKLTGA--DCIEL 160 (261)
Q Consensus 85 ~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~--q~~i~~a~~~Ga--d~VEl 160 (261)
+-+++.--+..+|+-.-..+ +.. .+.....+.|..|-++-.-|.+ ....+.+.+.|. +.|=|
T Consensus 141 ~~al~~~~~~~~li~~~~~~-----------n~~---~m~~~a~~~~~pvi~~~~~d~~~~k~l~~~l~~~GI~~~~Iil 206 (310)
T 2h9a_B 141 PVIGEALSGRNCLLSSATKD-----------NYK---PIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIM 206 (310)
T ss_dssp HHHHHHTTTSCCEEEEECTT-----------THH---HHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred HHHHHHHCCCCCCCCCCCCC-----------CHH---HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHEEE
T ss_conf 99999735103562335400-----------148---9999999829989998785389999999999986999778898
Q ss_pred CCCC--CHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCEEEECC
Q ss_conf 1211--10244435643366688999876-6541562352078
Q gi|254780438|r 161 YTGP--YGACYNNPQQERIFLNKLAITAQ-LAQKMDLQINAGH 200 (261)
Q Consensus 161 hTG~--Ya~a~~~~~~~~~el~~i~~aa~-~A~~lgL~VnAGH 200 (261)
--|. |...+ ..... -+.+++.++- .-+.+|+-+=+|.
T Consensus 207 DPGig~fGk~~--e~~~~-~~~~iR~~aL~~~~~lg~Pil~g~ 246 (310)
T 2h9a_B 207 DPLIGALGYGI--EYSYS-IIERMRLGALTGDKILAMPVVCFI 246 (310)
T ss_dssp ECCCCCTTTTH--HHHHH-HHHHHHHHHHTTCGGGCSCBEECH
T ss_pred ECCCCCCCCCH--HHHHH-HHHHHHHHHHCCCCCCCCCEEEEC
T ss_conf 15764346788--89999-999999875334655799879820
No 59
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=79.61 E-value=3.7 Score=21.11 Aligned_cols=78 Identities=13% Similarity=0.206 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHCCCCEEEEECCC----CCCCCCHHHHHHHHHHHCCCCCC-CEEEEE-------ECCCH-----------
Q ss_conf 98999999997499899982478----83348889999988740001367-415888-------34856-----------
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRP----DQRHIRYTDLPEIRRLIDEQFPK-AELNIE-------GYPNE----------- 81 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~----DrRHI~~~Dv~~l~~~~~~~~~~-~elNiE-------g~p~~----------- 81 (261)
-+.+++..+.+.|++++-+=++. .++-+++.|+..+++.+....-. ..+.+- +.+.+
T Consensus 13 gl~~a~~~a~~~G~~~~qif~~~p~~w~~~~~~~~~~~~~r~~~~~~~l~~~~~~~h~py~~nl~s~~~~~r~~si~~~~ 92 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFI 92 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 79999999997499999997899777788999999999999999982999735998478655647888799999999999
Q ss_pred HHHHHHHHHCCCEEEEEECCC
Q ss_conf 899999850721289710165
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDP 102 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r 102 (261)
+.++++.++....|++.|-.+
T Consensus 93 ~~l~~a~~LGa~~vv~H~G~~ 113 (285)
T 1qtw_A 93 DEMQRCEQLGLSLLNFHPGSH 113 (285)
T ss_dssp HHHHHHHHTTCCEEEECCCBC
T ss_pred HHHHHHHHCCCCCEEECCCCC
T ss_conf 999999980886547447767
No 60
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A*
Probab=78.98 E-value=2.8 Score=21.93 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=21.7
Q ss_pred ECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 0789898779999973699638842599999999
Q gi|254780438|r 198 AGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 198 AGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
+|---+.+.....++. ...+=|.+|-++|++-=
T Consensus 283 ~G~i~~~e~ae~~l~~-g~~DlV~~gR~~iadPd 315 (343)
T 3kru_A 283 VGLITTQELAEEILSN-ERADLVALGRELLRNPY 315 (343)
T ss_dssp ESSCCCHHHHHHHHHT-TSCSEEEESHHHHHCTT
T ss_pred ECCCCCHHHHHHHHHC-CCCEEHHHHHHHHHCCH
T ss_conf 8994999999999987-99212686399987934
No 61
>2q02_A Putative cytoplasmic protein; NP_463296.1, structural genomics, joint center for structural genomics, JCSG; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=77.42 E-value=4.2 Score=20.68 Aligned_cols=134 Identities=10% Similarity=0.056 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCCC-CHHHHHHHHHHHCCCCCCCEEE-EEEC-C----C-------HHHHHHHHH
Q ss_conf 99899999999749989998247883348-8899999887400013674158-8834-8----5-------689999985
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQRHI-RYTDLPEIRRLIDEQFPKAELN-IEGY-P----N-------ETFLNLCER 89 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~DrRHI-~~~Dv~~l~~~~~~~~~~~elN-iEg~-p----~-------~e~i~ia~~ 89 (261)
=++-++...+.++|.|||-++........ ...++..+++.+.+. ++++. +... + . .+.+++|..
T Consensus 19 l~l~e~i~~a~e~Gfd~IEl~~~~~~~~~~~~~~~~~~~~~l~~~--gl~i~~l~~~~~~~~~~~~~~~~~~~~i~~A~~ 96 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKY--GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQG 96 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHT--TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHC--CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 899999999998199989982466653334766099999999985--994788336546677558999999999999998
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC-------CCCCCHHHHHHHHCCCC-EEEEC
Q ss_conf 07212897101655533357822133378899999862026963899725-------44441479999740661-46511
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD-------GNGNEHSLQAAKLTGAD-CIELY 161 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID-------pd~~q~~i~~a~~~Gad-~VElh 161 (261)
+....+.++|-....-. .|+. -.+.|+.+.....+.|+++.+=.- +..+ ..++....+|.+ .+-+-
T Consensus 97 lG~~~i~~~~~~~~~~~---~~~~--~~~~l~~l~~~a~~~Gv~l~~E~~~~~~~~~~~~~-~a~~li~~~~~~~~l~~D 170 (272)
T 2q02_A 97 VGARALVLCPLNDGTIV---PPEV--TVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAV-WAQQLIREAGSPFKVLLD 170 (272)
T ss_dssp HTCSEEEECCCCSSBCC---CHHH--HHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHH-HHHHHHHHHTCCCEEEEE
T ss_pred CCCCEEEEECCCCCCCC---HHHH--HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCHH-HHHHHHHHCCCCEEEEEE
T ss_conf 09997999279987610---3999--99999999988612697799998988764005899-999999970986589840
Q ss_pred CCCC
Q ss_conf 2111
Q gi|254780438|r 162 TGPY 165 (261)
Q Consensus 162 TG~Y 165 (261)
||..
T Consensus 171 ~~h~ 174 (272)
T 2q02_A 171 TFHH 174 (272)
T ss_dssp HHHH
T ss_pred CCHH
T ss_conf 5213
No 62
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, structural genomics, joint center for structural genomics, JCSG; 1.91A {Haemophilus somnus 129PT}
Probab=77.16 E-value=4.3 Score=20.63 Aligned_cols=197 Identities=12% Similarity=0.060 Sum_probs=115.7
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEE-----CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEE
Q ss_conf 868998999999997499899982-----478833488899999887400013674158883485689999985072128
Q gi|254780438|r 21 LPWPNLVHIGKIALQSGASGLTVH-----PRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQI 95 (261)
Q Consensus 21 ~~~P~~~~~a~~~~~~GadgITvH-----~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qv 95 (261)
.++=++-+-.+.+.++|+|.|-+- -=|. =-.-+..+..++. .+ ..+..+=-..-+++++-..+..++.+
T Consensus 23 ad~~~l~~~i~~l~~~g~d~iHiDimDG~Fvpn-~t~g~~~i~~i~~----~~-~~DvHLMv~~P~~~i~~~~~~g~d~I 96 (237)
T 3cu2_A 23 ANWLQLNEEVTTLLENQINVLHFDIADGQFSSL-FTVGAIGIKYFPT----HC-FKDVHLMVRNQLEVAKAVVANGANLV 96 (237)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSC-BCBCTHHHHTSCT----TS-EEEEEEECSCHHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC-CCCCHHHHHHHHC----CC-CCEEEEEEECCCCCHHHHHHCCCCEE
T ss_conf 799999999999997798989996867967776-5768899997301----78-72488999635201789975799689
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC---------CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 9710165553335782213337889999986202---------6963899725444414799997406614651121110
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHN---------LGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~---------~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
|+=+|.-+ + +...+..+++ .|+++.+-+.|+.....++.-.. .+|.|=+-|-.-.
T Consensus 97 ~~H~E~~~------------~---~~~~i~~i~~~~~~~~~~~~~i~~Glalnp~T~~~~i~~~l~-~iD~VlvMsV~PG 160 (237)
T 3cu2_A 97 TLQLEQYH------------D---FALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLD-QIDVIQLLTLDPR 160 (237)
T ss_dssp EEETTCTT------------S---HHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTT-TCSEEEEESEETT
T ss_pred EEECCCCC------------C---HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHC-CCCEEEEEEECCC
T ss_conf 98452456------------7---899999998766666765513143045079998999997645-5786999987789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2444356433666889998766541562--35207898987799999736996388425999999999409999999999
Q gi|254780438|r 167 ACYNNPQQERIFLNKLAITAQLAQKMDL--QINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRR 244 (261)
Q Consensus 167 ~a~~~~~~~~~el~~i~~aa~~A~~lgL--~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ 244 (261)
+.........++|+++..++..+.++ .+-+-=|.|.+|++.+.+.=..++-+-.|-+|... -..+.|++++.
T Consensus 161 --~~Gq~f~~~~l~ki~~l~~~~~~~~~~~~I~VDGGIn~~~i~~l~~aga~vd~~V~GS~iF~~----d~~~~i~~lk~ 234 (237)
T 3cu2_A 161 --NGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAKYFKQGTHQIDWLVSGSALFSG----ELKTNLKVWKS 234 (237)
T ss_dssp --TTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHHHHHHSSSCCCCEEECGGGGSS----CHHHHHHHHHH
T ss_pred --CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEECCCEECC----CHHHHHHHHHH
T ss_conf --887678821889999999999707998069997994889999999734899989968430496----88999999999
Q ss_pred H
Q ss_conf 9
Q gi|254780438|r 245 A 245 (261)
Q Consensus 245 i 245 (261)
.
T Consensus 235 ~ 235 (237)
T 3cu2_A 235 S 235 (237)
T ss_dssp H
T ss_pred H
T ss_conf 6
No 63
>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=76.46 E-value=2.1 Score=22.72 Aligned_cols=49 Identities=14% Similarity=0.195 Sum_probs=37.7
Q ss_pred HHHHHHHHHHCCCCCEEEE----EEC---CCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 8899999862026963899----725---444414799997406614651121110
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISL----FAD---GNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSL----FID---pd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
..|++.|+.+++.||.|++ |-- -+--...++.++++|.|+||+-.|...
T Consensus 80 ~~L~eKI~l~~~~~V~v~~GGTlfE~a~~q~~~d~yl~~~k~lGf~~IEISdGsi~ 135 (276)
T 1u83_A 80 KDLEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLP 135 (276)
T ss_dssp TTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSC
T ss_pred HHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 89999999999869969789689999998188999999999859988997898012
No 64
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=75.57 E-value=4.7 Score=20.34 Aligned_cols=184 Identities=11% Similarity=0.149 Sum_probs=100.8
Q ss_pred HHHHH---CCCCCCC--CHHHHHHH-HHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE-ECCCHHHH
Q ss_conf 22322---0788689--98999999-99749989998-247883348889999988740001367415888-34856899
Q gi|254780438|r 13 AVLRN---RRNLPWP--NLVHIGKI-ALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIE-GYPNETFL 84 (261)
Q Consensus 13 AtLRn---aRg~~~P--~~~~~a~~-~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiE-g~p~~e~i 84 (261)
.|||. +-+..++ +.++.+.. ..++|.+.|-+ +|.-..... ..+..+..............+- ..+....+
T Consensus 25 ~TLRDG~Q~~~~~fs~e~k~~i~~~lL~~~Gv~~IEvG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 102 (337)
T 3ble_A 25 VTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGEL--ETVQKIMEWAATEQLTERIEILGFVDGNKTV 102 (337)
T ss_dssp CHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHH--HHHHHHHHHHHHTTCGGGEEEEEESSTTHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99862266899998999999999999998497989978876686788--8899999985230033345687650133789
Q ss_pred HHHHHHCCCEEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC-C------CCC--CHHHHHHHHCC
Q ss_conf 9998507212897-101655533357822133378899999862026963899725-4------444--14799997406
Q gi|254780438|r 85 NLCERYKPEQITL-VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD-G------NGN--EHSLQAAKLTG 154 (261)
Q Consensus 85 ~ia~~ikP~qvtL-VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID-p------d~~--q~~i~~a~~~G 154 (261)
+.+.+...+.+.+ +|-....+..-.|++.....+.+.+.++..++.|.+|+.... + +++ .+.++.+.+.|
T Consensus 103 ~~~~~~g~~~i~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 182 (337)
T 3ble_A 103 DWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEH 182 (337)
T ss_dssp HHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSC
T ss_pred HHHHHCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99985699878642566799999997499999999999999999863975765202356666677899988999998751
Q ss_pred CCEEEECCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC--HHH
Q ss_conf 6146511211102444--356433666889998766541562352078989--877
Q gi|254780438|r 155 ADCIELYTGPYGACYN--NPQQERIFLNKLAITAQLAQKMDLQINAGHDLT--IQN 206 (261)
Q Consensus 155 ad~VElhTG~Ya~a~~--~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn--~~N 206 (261)
+|+|-| |+... .|.+....+..+++ ..-+..+++|+=-++. +-|
T Consensus 183 ad~I~l-----~DT~G~~~P~~v~~lv~~l~~---~~~~~~i~~H~Hnd~GlA~AN 230 (337)
T 3ble_A 183 IERIFL-----PDTLGVLSPEETFQGVDSLIQ---KYPDIHFEFHGHNDYDLSVAN 230 (337)
T ss_dssp CSEEEE-----ECTTCCCCHHHHHHHHHHHHH---HCTTSCEEEECBCTTSCHHHH
T ss_pred CCCCCC-----CCCCCCCCHHHHHHHHHHHHH---HCCCCEEEEEECCCCCCHHHH
T ss_conf 135203-----651134786899999999998---589974898527996729999
No 65
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus HB8} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=73.90 E-value=5.2 Score=20.06 Aligned_cols=142 Identities=14% Similarity=0.098 Sum_probs=86.4
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECC---CCCCCCC--HHHHHHHHHHHCCCCCCCEEEEE---------------ECCCH
Q ss_conf 6899899999999749989998247---8833488--89999988740001367415888---------------34856
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPR---PDQRHIR--YTDLPEIRRLIDEQFPKAELNIE---------------GYPNE 81 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R---~DrRHI~--~~Dv~~l~~~~~~~~~~~elNiE---------------g~p~~ 81 (261)
.-+++.+++....+.|++|++.|-| |--.... ++.+..+++.+... ++.+..- .+|++
T Consensus 31 ~~~~~~~~~~~~~~lG~~~v~fHd~Dl~P~~~~~~e~~~~~~~lk~~l~~~--Gl~~~~~t~nlf~~p~y~~Gs~tnPDp 108 (387)
T 1bxb_A 31 ERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDET--GLKVPMVTANLFSDPAFKDGAFTSPDP 108 (387)
T ss_dssp CCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHH--TCBCCEEECCCSSSGGGGGCSTTCSSH
T ss_pred CCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCEEEECCCCCCCHHHHCCCCCCCCH
T ss_conf 127899999999834997783266655888999899999999999999963--991124236544573131487789798
Q ss_pred -----------HHHHHHHHHCCCEEEEEECCC---CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---
Q ss_conf -----------899999850721289710165---553335782213337889999986202696389972544441---
Q gi|254780438|r 82 -----------TFLNLCERYKPEQITLVPDDP---HQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE--- 144 (261)
Q Consensus 82 -----------e~i~ia~~ikP~qvtLVPe~r---~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q--- 144 (261)
+.++++.+.--..+++-|=.. -..+++-..-...-.+.|+.+.....+.|..+.++|+|-|.+
T Consensus 109 ~vR~~Ai~~~k~aId~a~~LGa~~~vlW~G~dG~~~~~~~d~~~~~~~~~e~l~~v~~~a~~~g~g~~~~iEpKP~EP~~ 188 (387)
T 1bxb_A 109 WVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRG 188 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99999999999999999995898699757878777876558999999999999999987765075726998157888775
Q ss_pred --------HHHHHHHHCCC-CEEEECCCCC
Q ss_conf --------47999974066-1465112111
Q gi|254780438|r 145 --------HSLQAAKLTGA-DCIELYTGPY 165 (261)
Q Consensus 145 --------~~i~~a~~~Ga-d~VElhTG~Y 165 (261)
..+..+.++|- +.+-++--.+
T Consensus 189 ~~~~~d~~~al~~l~~~g~~~~~gl~lD~g 218 (387)
T 1bxb_A 189 DIYFATVGSMLAFIHTLDRPERFGLNPEFA 218 (387)
T ss_dssp EESSCSHHHHHHHHTTSSSGGGEEECCBHH
T ss_pred CCCCCCHHHHHHHHHHHCCHHHEEECCCHH
T ss_conf 652588999999999829814363340142
No 66
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=73.32 E-value=5.3 Score=19.97 Aligned_cols=217 Identities=13% Similarity=0.077 Sum_probs=106.2
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCC-----CCCCHHHHHHHHHHHCCCCCCCEEEEEEC------------------
Q ss_conf 6899899999999749989998247883-----34888999998874000136741588834------------------
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQ-----RHIRYTDLPEIRRLIDEQFPKAELNIEGY------------------ 78 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~Dr-----RHI~~~Dv~~l~~~~~~~~~~~elNiEg~------------------ 78 (261)
+.| +-+....+.++|.+||=+-+.++. .=..+..+..+++.+..+ ++++.--+.
T Consensus 14 dlp-le~~l~~aa~~G~~gIEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~~~~~~~~~~~~~ 90 (340)
T 2zds_A 14 DLP-LEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKY--GLKCWAISNHLVGQAVCDAIIDERHEA 90 (340)
T ss_dssp TSC-HHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHT--TCEEEEEEEHHHHHHHHCSCCSHHHHH
T ss_pred CCC-HHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHC--CCEEEEEEECCCCCCCCCCCCCHHHHC
T ss_conf 998-99999999982999899835777766000007978999999999982--996899740357766676000224403
Q ss_pred ---------C------------CHHHHHHHHHHCCCEEEEEECCCCCCCCC-----------CCCCHHHHHHHHHHHHHH
Q ss_conf ---------8------------56899999850721289710165553335-----------782213337889999986
Q gi|254780438|r 79 ---------P------------NETFLNLCERYKPEQITLVPDDPHQLTSD-----------HGWDFLQNQALLTKTVAR 126 (261)
Q Consensus 79 ---------p------------~~e~i~ia~~ikP~qvtLVPe~r~elTTe-----------gGldv~~~~~~L~~~i~~ 126 (261)
+ ....+++|.......+..-+..+...... -+|. .-.+.|+.+...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lg~~~v~~~~~~~~~~~~~~~p~~~~~~~e~~~~--~~~e~l~~l~~~ 168 (340)
T 2zds_A 91 ILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQ--DFADRWNPILDV 168 (340)
T ss_dssp HSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHH--HHHHHHHHHHHH
T ss_pred CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHH--HHHHHHHHHHHH
T ss_conf 585121256675899999999999999999853998798435556677677888643101499999--999999999999
Q ss_pred HCCCCCEEEEEECCCCCCH----HHHHHHH-CCCCEEEE--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC------
Q ss_conf 2026963899725444414----7999974-06614651--121110244435643366688999876654156------
Q gi|254780438|r 127 LHNLGSRISLFADGNGNEH----SLQAAKL-TGADCIEL--YTGPYGACYNNPQQERIFLNKLAITAQLAQKMD------ 193 (261)
Q Consensus 127 l~~~girvSLFIDpd~~q~----~i~~a~~-~Gad~VEl--hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg------ 193 (261)
..+.|+++.+=..+..... ....... .+.+.+-+ -+|... .........+.++..-..+.+-..
T Consensus 169 a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~D~~h~~---~~~~d~~~~i~~~~~rI~~vHikD~~~~~~ 245 (340)
T 2zds_A 169 FDAEGVRFAHEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFV---WQDLDPVGFLWDFRDRIYHVDCKEARKRLD 245 (340)
T ss_dssp HHHHTCEEEEECCTTSSCCSHHHHHHHHHHTTTCTTEEEEECCHHHH---HTTCCHHHHHHHTGGGEEEEEECEEEECCC
T ss_pred HHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEE---CCCCCHHHHHHHHCCCEEEEEEEECCCCCC
T ss_conf 99869868997066434343567999999703785201112555420---124699999998217176999866556643
Q ss_pred -------------------CEEEECC-CCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -------------------2352078-9898779999973699638842599999999940999999999999
Q gi|254780438|r 194 -------------------LQINAGH-DLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRAC 246 (261)
Q Consensus 194 -------------------L~VnAGH-gLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii 246 (261)
.-|-.|+ .++|..+-..+..+.+=--+||=|-=-......|..++|.-.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~i~~~L~~~Gy~G~~siE~ed~~~~~~~~~~~ai~~lr~~~ 318 (340)
T 2zds_A 246 GRNGRLGSHLPWGDPRRGWDFVSAGHGDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEALTRLKAFD 318 (340)
T ss_dssp SSSCTTCTTCCTTCTTSSEEEECTTSSCCCHHHHHHHHHHTTCCSCEEECCCCTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 3245445787722201266520799975379999999998499739999882489998899999999999730
No 67
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aeropyrum pernix K1}
Probab=73.05 E-value=5.4 Score=19.93 Aligned_cols=70 Identities=19% Similarity=0.187 Sum_probs=46.7
Q ss_pred ECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHCCC
Q ss_conf 3485689999985072128971016555333578221333788999998620269-638997254444147999974066
Q gi|254780438|r 77 GYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLG-SRISLFADGNGNEHSLQAAKLTGA 155 (261)
Q Consensus 77 g~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~g-irvSLFIDpd~~q~~i~~a~~~Ga 155 (261)
..|.++|++.+.+.+|+.++|= -+. ..+...++.+++.|++.| ..+-+|+--.+.+...+..+++|+
T Consensus 55 ~~p~e~~v~~a~~~~~d~v~lS-----~~~-------~~~~~~~~~~i~~L~~~g~~~i~i~vGG~~~~~d~~~l~~~Gv 122 (161)
T 2yxb_A 55 RQTPEQVAMAAVQEDVDVIGVS-----ILN-------GAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGI 122 (161)
T ss_dssp BCCHHHHHHHHHHTTCSEEEEE-----ESS-------SCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHCCCCEEEEE-----CCC-------CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf 7899999999986699899985-----576-------6448999999999997599998799966879888999997798
Q ss_pred CEE
Q ss_conf 146
Q gi|254780438|r 156 DCI 158 (261)
Q Consensus 156 d~V 158 (261)
|+|
T Consensus 123 d~v 125 (161)
T 2yxb_A 123 REI 125 (161)
T ss_dssp CEE
T ss_pred CEE
T ss_conf 888
No 68
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=72.71 E-value=2.6 Score=22.15 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=40.9
Q ss_pred HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHH
Q ss_conf 99974066146511211102444356433666889998766541562352078989877999997369963884259999
Q gi|254780438|r 148 QAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFA 227 (261)
Q Consensus 148 ~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiI 227 (261)
+.....+.+.+.+..++|......+. . +....+.+. +.-|-++.+.+-+.....++. ...+=|.+|..++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~ik~~~--~~pvi~~G~~~~e~ae~~l~~-g~~DlV~~gR~ll 326 (365)
T 2gou_A 257 ALLNKHRIVYLHIAEVDWDDAPDTPV----S---FKRALREAY--QGVLIYAGRYNAEKAEQAIND-GLADMIGFGRPFI 326 (365)
T ss_dssp HHHHHTTCSEEEEECCBTTBCCCCCH----H---HHHHHHHHC--CSEEEEESSCCHHHHHHHHHT-TSCSEEECCHHHH
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCH----H---HHHHHHHHC--CCEEEEECCCCHHHHHHHHHC-CCCCHHHHHHHHH
T ss_conf 98531583389714667666888647----7---999998726--880999789699999999987-9976489889999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780438|r 228 ATALE 232 (261)
Q Consensus 228 seAl~ 232 (261)
+|-=+
T Consensus 327 adPd~ 331 (365)
T 2gou_A 327 ANPDL 331 (365)
T ss_dssp HCTTH
T ss_pred HCCCH
T ss_conf 79009
No 69
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=71.64 E-value=5.8 Score=19.71 Aligned_cols=143 Identities=12% Similarity=0.116 Sum_probs=82.2
Q ss_pred HHHH---HCCCCCC--CCHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
Q ss_conf 2232---2078868--99899999999749989998-2478833488899999887400013674158883485689999
Q gi|254780438|r 13 AVLR---NRRNLPW--PNLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNL 86 (261)
Q Consensus 13 AtLR---naRg~~~--P~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~i 86 (261)
-||| |+-+..+ -..++.+....++|.+-|-+ +|.- .+.|.......... .....+..-.......+..
T Consensus 12 ~TLRDG~Q~~~~~~~~e~k~~i~~~L~~aGv~~IEvG~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 85 (325)
T 3eeg_A 12 TTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVS-----SPGDFNSVVEITKA-VTRPTICALTRAKEADINI 85 (325)
T ss_dssp CGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTS-----CHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC-----CHHHHHHHHHHHHH-CCCCEEEEEECCCHHHHHH
T ss_conf 99270034999988999999999999986979899978979-----98999999999863-1566166663012124677
Q ss_pred HH----HHCCCEE-EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHHHHCCC
Q ss_conf 98----5072128-97101655533357822133378899999862026963899725------4444147999974066
Q gi|254780438|r 87 CE----RYKPEQI-TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAAKLTGA 155 (261)
Q Consensus 87 a~----~ikP~qv-tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a~~~Ga 155 (261)
.. ......+ ..++.........-++......+.....++..++.|..|+++.. ++.-.+.++.+.+.|+
T Consensus 86 ~~~~~~~~~~~~v~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~G~ 165 (325)
T 3eeg_A 86 AGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGA 165 (325)
T ss_dssp HHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 69999755886799725764999999973589999999999888887514236773045542079999999999998599
Q ss_pred CEEEEC
Q ss_conf 146511
Q gi|254780438|r 156 DCIELY 161 (261)
Q Consensus 156 d~VElh 161 (261)
|+|-|-
T Consensus 166 d~I~l~ 171 (325)
T 3eeg_A 166 DVVNIP 171 (325)
T ss_dssp SEEECC
T ss_pred CEEEEC
T ss_conf 999954
No 70
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii}
Probab=71.49 E-value=4.5 Score=20.49 Aligned_cols=42 Identities=7% Similarity=0.206 Sum_probs=20.8
Q ss_pred CCHHHH-HHHHHHCCCCEEEEECC-----CCCCCCCHHHHHHHHHHHC
Q ss_conf 998999-99999749989998247-----8833488899999887400
Q gi|254780438|r 24 PNLVHI-GKIALQSGASGLTVHPR-----PDQRHIRYTDLPEIRRLID 65 (261)
Q Consensus 24 P~~~~~-a~~~~~~GadgITvH~R-----~DrRHI~~~Dv~~l~~~~~ 65 (261)
|-+.++ .....++|.+.|-+-.. ++.-.+.+.=+..+.+++.
T Consensus 51 p~~t~~~i~~ik~~GfN~VRiPv~w~~~~~~~~~~~~~~l~~l~~vV~ 98 (353)
T 3l55_A 51 PETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVE 98 (353)
T ss_dssp CCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 726699999999869986995365998279999719899999999999
No 71
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=70.90 E-value=6 Score=19.61 Aligned_cols=79 Identities=14% Similarity=0.249 Sum_probs=41.0
Q ss_pred HHHHHHCCCCEEEECCCC-C--HHHHHHHH-------------HHHHHHHHHHHHHHHH----HHCCCEEEECC----CC
Q ss_conf 999974066146511211-1--02444356-------------4336668899987665----41562352078----98
Q gi|254780438|r 147 LQAAKLTGADCIELYTGP-Y--GACYNNPQ-------------QERIFLNKLAITAQLA----QKMDLQINAGH----DL 202 (261)
Q Consensus 147 i~~a~~~Gad~VElhTG~-Y--a~a~~~~~-------------~~~~el~~i~~aa~~A----~~lgL~VnAGH----gL 202 (261)
-..|++.|+|.||||.+. | -+.|..+. +....+..+.++...+ .-+|+++++-. |+
T Consensus 162 A~~A~~AGfDgVEiH~ahGyL~l~qFlsp~~N~RtDeyGGs~enR~Rf~~eii~~ir~~~g~~~~v~~Ris~~~~~~~g~ 241 (690)
T 3k30_A 162 VRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGI 241 (690)
T ss_dssp HHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSC
T ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCC
T ss_conf 99999829999996255543166664287557776556888410510699999899987051234415336567321477
Q ss_pred CHHHHHHHHH---HCCCCEEEEEHHH
Q ss_conf 9877999997---3699638842599
Q gi|254780438|r 203 TIQNIPNLIN---AIPYISEISVGHA 225 (261)
Q Consensus 203 n~~Nl~~~i~---~Ip~I~EvsIGHa 225 (261)
+.+-...++. +...+..+++|..
T Consensus 242 ~~~~~~~~~~~l~~~~~~~~~~~g~~ 267 (690)
T 3k30_A 242 TREDIEGVLRELGELPDLWDFAMGSW 267 (690)
T ss_dssp CHHHHHHHHHHHTTSSSEEEEECSCH
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 47889999999997147157721311
No 72
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor}
Probab=69.54 E-value=6.4 Score=19.41 Aligned_cols=204 Identities=19% Similarity=0.209 Sum_probs=121.9
Q ss_pred CCCCHH---HHHHHHHHCCCCEEEEE-----CCCCCCCCCHH------------HHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 689989---99999997499899982-----47883348889------------99998874000136741588834856
Q gi|254780438|r 22 PWPNLV---HIGKIALQSGASGLTVH-----PRPDQRHIRYT------------DLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 22 ~~P~~~---~~a~~~~~~GadgITvH-----~R~DrRHI~~~------------Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
.|||.- +++....++|||-|-+- |--|-=-||.. ++.++.+-+....+.+++=+=+|-++
T Consensus 29 G~P~~e~s~~~l~~l~~~G~D~iEiGiPfSDPvaDGpvIq~a~~raL~~G~~~~~~~~~~~~~r~~~~~~p~vlM~Y~N~ 108 (271)
T 3nav_A 29 GDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANL 108 (271)
T ss_dssp TSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHH
T ss_conf 18987899999999997699999978998887776899999988877648607667667766420267888799975046
Q ss_pred -------HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCC
Q ss_conf -------8999998507212897101655533357822133378899999862026963899725444414799997406
Q gi|254780438|r 82 -------TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTG 154 (261)
Q Consensus 82 -------e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~G 154 (261)
+|++-+.+.- -.-.+|||-|-|- -.++.+.+++.|+....|+-|.....-++...+..
T Consensus 109 i~~~G~e~F~~~~~~~G-v~GviipDLp~ee--------------~~~~~~~~~~~gl~~I~lvsptt~~~Ri~~i~~~a 173 (271)
T 3nav_A 109 VYARGIDDFYQRCQKAG-VDSVLIADVPTNE--------------SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp HHHTCHHHHHHHHHHHT-CCEEEETTSCGGG--------------CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred HHHCCHHHHHHHHHHCC-CCEEEECCCCHHH--------------HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCC
T ss_conf 65528999999998769-9489945898156--------------59999998767971799944675588999998618
Q ss_pred CCEEEE--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH-HHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 614651--12111024443564336668899987665415623520789898-779999973699638842599999999
Q gi|254780438|r 155 ADCIEL--YTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTI-QNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 155 ad~VEl--hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~-~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
...|=+ ++|.....-.-..+....++++++ . -.+-|-.|-|..- +-+..+++ ..-+=|=+|-+||-. +
T Consensus 174 ~gfiY~vs~~GvTG~~~~~~~~~~~~i~~ik~----~--t~~Pv~vGFGI~~~e~v~~~~~--~~ADGvVVGSaiv~~-i 244 (271)
T 3nav_A 174 KGYTYLLSRAGVTGAETKANMPVHALLERLQQ----F--DAPPALLGFGISEPAQVKQAIE--AGAAGAISGSAVVKI-I 244 (271)
T ss_dssp CSCEEECCCC--------CCHHHHHHHHHHHH----T--TCCCEEECSSCCSHHHHHHHHH--TTCSEEEESHHHHHH-H
T ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH----C--CCCCEEEEEEECCHHHHHHHHH--CCCCEEEECHHHHHH-H
T ss_conf 87389850555678776665028999998753----3--6897289830188999999987--389999988799999-9
Q ss_pred HHHHH------HHHHHHHHHHHHH
Q ss_conf 94099------9999999999741
Q gi|254780438|r 232 ECGVK------EAVFCFRRACGQH 249 (261)
Q Consensus 232 ~~GL~------~aI~~~~~ii~~~ 249 (261)
.-+++ +.+++|.+-++++
T Consensus 245 ~~~~~~~~~~~~~v~~~~~~lk~a 268 (271)
T 3nav_A 245 ETHLDNPAKQLTELANFTQAMKKA 268 (271)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 870536789999999999999987
No 73
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=69.43 E-value=6.5 Score=19.40 Aligned_cols=69 Identities=13% Similarity=0.234 Sum_probs=47.4
Q ss_pred HHHHHHHHH-------HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHC
Q ss_conf 689999985-------0721289710165553335782213337889999986202696389972544441479999740
Q gi|254780438|r 81 ETFLNLCER-------YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLT 153 (261)
Q Consensus 81 ~e~i~ia~~-------ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~ 153 (261)
.+++.++++ ..|.||.++|-...- .+...++.+.|+++||||-+-.+...-.+.++.|...
T Consensus 314 ~~~i~~lle~~~~~~~~~~~~v~vi~~~~~~------------~~~a~~v~~~Lr~~girv~~d~~~~~l~kkir~A~~~ 381 (434)
T 1wu7_A 314 DAVISLLLKRENVQIPREKKSVYICRVGKIN------------SSIMNEYSRKLRERGMNVTVEIMERGLSAQLKYASAI 381 (434)
T ss_dssp HHHHHHHHHHTTCCCCCSSCEEEEEEESSCC------------HHHHHHHHHHHHTTTCEEEECCSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCCCCCCEEEEEECHHH------------HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHC
T ss_conf 8899999996499998645523899817889------------9999999999997799899972899999999999987
Q ss_pred CCCEEEEC
Q ss_conf 66146511
Q gi|254780438|r 154 GADCIELY 161 (261)
Q Consensus 154 Gad~VElh 161 (261)
|+..+=+-
T Consensus 382 ~ip~~liv 389 (434)
T 1wu7_A 382 GADFAVIF 389 (434)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEE
T ss_conf 98999998
No 74
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=68.43 E-value=6.8 Score=19.26 Aligned_cols=122 Identities=4% Similarity=0.047 Sum_probs=63.3
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEC---------CCCCCCCCHHHHHHHHHHHCCCCCCCEE
Q ss_conf 4533221443223220788689989999999974998999824---------7883348889999988740001367415
Q gi|254780438|r 3 TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHP---------RPDQRHIRYTDLPEIRRLIDEQFPKAEL 73 (261)
Q Consensus 3 t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~---------R~DrRHI~~~Dv~~l~~~~~~~~~~~el 73 (261)
.++||+. -++|+.= ..++-++.+.+.++|.+||=+-. +.+........+..+++++..+ +++.
T Consensus 21 ~~ig~~~---ys~~~~~---~~dl~~~L~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gl~i 92 (305)
T 3obe_A 21 KKMGLQT---YSLGQEL---LQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDA--GLRI 92 (305)
T ss_dssp CCCEEEG---GGGTHHH---HTTHHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHT--TCEE
T ss_pred CEEEEEE---EECCCCH---HCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEE
T ss_conf 6389998---4537671---139999999999849997998776664211234474111232099999999984--9868
Q ss_pred EEEECC-----------------CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 888348-----------------568999998507212897101655533357822133378899999862026963899
Q gi|254780438|r 74 NIEGYP-----------------NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 74 NiEg~p-----------------~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL 136 (261)
--=+.+ ....++++.+.....+.+.+... . .++.+|+. -.+.|....+..++.|+++.+
T Consensus 93 ~s~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~~~~~~~~~-~-~~~~~~~~--~~e~l~~~~~~a~~~Gv~l~~ 168 (305)
T 3obe_A 93 SSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLPR-I-ENEDDAKV--VSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp EEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCCCC-C-SSHHHHHH--HHHHHHHHHHHHHTTTCEEEE
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC-C-CCHHHHHH--HHHHHHHHHHHHHHCCCEEEE
T ss_conf 5426653324675788999999999999999985997577068998-8-88899999--999999999999977977999
No 75
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=68.19 E-value=6.9 Score=19.23 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=78.3
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECC---CCCCCC--CHHHHHHHHHHHCCCCCCCEEEEEE---------------CCCH-
Q ss_conf 899899999999749989998247---883348--8899999887400013674158883---------------4856-
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPR---PDQRHI--RYTDLPEIRRLIDEQFPKAELNIEG---------------YPNE- 81 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R---~DrRHI--~~~Dv~~l~~~~~~~~~~~elNiEg---------------~p~~- 81 (261)
..++++++....+.|++|+|.|-+ |--.-. +++=+..+++.+... .+.+...- +|.+
T Consensus 32 ~~~~~e~~~~l~~lG~~~~~fHd~dl~P~~~~~~~~~~~~~~~k~~l~~~--Gl~~~~~t~nlf~~p~f~~Ga~TnPD~~ 109 (393)
T 1xim_A 32 ALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDET--GLIVPMVTTNLFTHPVFKDGGFTSNDRS 109 (393)
T ss_dssp CCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHH--TCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred CCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCEEEECCCCCCCCCCCCCCCCCCCCHH
T ss_conf 55799999999982998683366777888998688999999999999963--9841020564356812016887896999
Q ss_pred ----------HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHH----HHHHHHHHHHCCCCCEEEEEECCCCCC---
Q ss_conf ----------899999850721289710165553335782213337----889999986202696389972544441---
Q gi|254780438|r 82 ----------TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQ----ALLTKTVARLHNLGSRISLFADGNGNE--- 144 (261)
Q Consensus 82 ----------e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~----~~L~~~i~~l~~~girvSLFIDpd~~q--- 144 (261)
+.++++.+.--..+++.|-... --+.+.-|..... +.|+.+.....+.|..+.+.|+|.|.+
T Consensus 110 vR~~Ai~~~k~aIDiaa~LGa~~~v~W~G~dG-~~y~~~~d~~~~~d~~~e~l~~v~~ya~~~g~gv~~~IEpKP~EP~~ 188 (393)
T 1xim_A 110 VRRYAIRKVLRQMDLGAELGAKTLVLWGGREG-AEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRG 188 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEECTTSE-ESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99999999999999999968996998379886-67886569999999999999999999986089806997237888875
Q ss_pred --------HHHHHHHHCCCC-EEEE
Q ss_conf --------479999740661-4651
Q gi|254780438|r 145 --------HSLQAAKLTGAD-CIEL 160 (261)
Q Consensus 145 --------~~i~~a~~~Gad-~VEl 160 (261)
..+..+.++|-+ .+-+
T Consensus 189 ~~~i~d~~~al~~i~~lg~p~~vgl 213 (393)
T 1xim_A 189 DILLPTAGHAIAFVQELERPELFGI 213 (393)
T ss_dssp EESSCSHHHHHHHHTTSSSGGGEEE
T ss_pred CEECCCHHHHHHHHHHHCCCCCEEE
T ss_conf 3441889999999998199542778
No 76
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=67.72 E-value=7 Score=19.16 Aligned_cols=126 Identities=8% Similarity=0.022 Sum_probs=63.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CEEEEEE------CCC----CCCHHHHHHHHCCCCEEEECCCCCHHHHHH
Q ss_conf 55333578221333788999998620269-6389972------544----441479999740661465112111024443
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNLG-SRISLFA------DGN----GNEHSLQAAKLTGADCIELYTGPYGACYNN 171 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~g-irvSLFI------Dpd----~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~ 171 (261)
+..|-+-|=++.....++.++++.+++.. -.+.+-+ +.. ....-.+...+.|+|.+++..|.|......
T Consensus 180 N~RtDeYGGs~enR~Rf~~Eii~aVr~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~g~~~~~~~~ 259 (340)
T 3gr7_A 180 NRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMN 259 (340)
T ss_dssp CCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf 98776457875678999999999999872887610203444458988789999999999864755364322401266567
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 5643366688999876654156235207898987799999736996388425999999999
Q gi|254780438|r 172 PQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 172 ~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
... -....+.+..+.+.+.-+.+ +|.=-+.+....++++ ...+=|.+|-++|++-=+
T Consensus 260 ~~~--~~~~~~~~~ik~~~~~pvi~-~G~i~~~~~ae~~l~~-g~aD~V~~gR~~iadPd~ 316 (340)
T 3gr7_A 260 VYP--GYQVPFAELIRREADIPTGA-VGLITSGWQAEEILQN-GRADLVFLGRELLRNPYW 316 (340)
T ss_dssp CCT--TTTHHHHHHHHHHTTCCEEE-ESSCCCHHHHHHHHHT-TSCSEEEECHHHHHCTTH
T ss_pred CCC--CCCHHHHHHHHHHCCCCEEE-ECCCCCHHHHHHHHHC-CCCCHHHHHHHHHHCCCH
T ss_conf 788--63137999999974986899-7275999999999987-994135878999879029
No 77
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=66.23 E-value=7.5 Score=18.97 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=67.8
Q ss_pred HCCCEEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 07212897-10165553335782213337889999986202696389972544441479999740661465112111024
Q gi|254780438|r 90 YKPEQITL-VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 90 ikP~qvtL-VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
+.|.+.|+ ++|. ....+...+...+..|++.|++++|= |-.....++...+++.+|.|-|. +.|-..
T Consensus 303 ~~~~~l~~Ei~e~----------~~~~~~~~~~~~~~~l~~~G~~iaid-dfG~~~~s~~~L~~l~~d~iKid-~~~i~~ 370 (437)
T 3hvb_A 303 LPPESLVFQISEA----------DATSYLKQAKQLTQGLATLHCQAAIS-QFGCSLNPFNALKHLTVQFIKID-GSFVQD 370 (437)
T ss_dssp CCTTCEEEEEEHH----------HHHHTHHHHHHHHHHHHHTTCEEEEE-EETCSSSHHHHHTTSCCSEEEEC-GGGSSC
T ss_pred CCCCEEEEEEEHH----------HHHCCHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCHHHHHHCCCCEEEEC-HHHHHH
T ss_conf 7531034553244----------43100243224555664168779986-79988412899983899999989-899950
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 4435643366688999876654156235207898987799999736
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAI 214 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~I 214 (261)
..+.... .-+......|+++|+.|=|- |..-+....++..+
T Consensus 371 i~~~~~~----~~l~~~i~~a~~~~~~viae-gVe~~~~~~~l~~~ 411 (437)
T 3hvb_A 371 LNQVENQ----EILKGLIAELHEQQKLSIVP-FVESASVLATLWQA 411 (437)
T ss_dssp CSSHHHH----HHHHHHHHHHHHTTCEEEEC-CCCSHHHHHHHHHH
T ss_pred CCCCHHH----HHHHHHHHHHHHCCCCEEEE-CCCCHHHHHHHHHC
T ss_conf 2887378----99999999999859958995-78939999999976
No 78
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=65.80 E-value=7.6 Score=18.91 Aligned_cols=193 Identities=16% Similarity=0.173 Sum_probs=114.8
Q ss_pred CHHHHHHHHHHCC-CCEEEEEC----CC---C-CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC--HHHHHHHH---HH
Q ss_conf 9899999999749-98999824----78---8-33488899999887400013674158883485--68999998---50
Q gi|254780438|r 25 NLVHIGKIALQSG-ASGLTVHP----RP---D-QRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN--ETFLNLCE---RY 90 (261)
Q Consensus 25 ~~~~~a~~~~~~G-adgITvH~----R~---D-rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia~---~i 90 (261)
|+-+.-+ +.+.| .+|+|--| |. + ...+.......++..+.. .+.++-+|-.+. ++|++-+. ..
T Consensus 9 d~~eik~-~~~~g~i~GvTTNPsl~~ka~~~~~~~~~~~~~~~~~~~~~~~--~~g~is~ev~~~~~~~m~~~a~~l~~~ 85 (223)
T 1wx0_A 9 SLEEIRE-IAAWGVLSGVTTNPTLVAKAFAAKGEALTEEAFAAHLRAICET--VGGPVSAEVTALEAEAMVAEGRRLAAI 85 (223)
T ss_dssp CHHHHHH-HHHHTCCCEEECCHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH--HTSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHH-HHCCCCCCEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC--CCCCEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9999999-8636995848048999997289952567899999999999724--589879998369789999999999863
Q ss_pred CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf 72128971016555333578221333788999998620269638997254444147999974066146511211102444
Q gi|254780438|r 91 KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYN 170 (261)
Q Consensus 91 kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~ 170 (261)
.|+.+-=+|= | +.|+ +.++.|++.||+|.+=.=-.+.| .-.|...|++.|-.|-|...+.-.
T Consensus 86 ~~nv~IKIP~-----t-~~G~----------~a~~~L~~~Gi~vn~T~vfs~~Q--a~~A~~aga~yispyvgR~~d~g~ 147 (223)
T 1wx0_A 86 HPNIVVKLPT-----T-EEGL----------KACKRLSAEGIKVNMTLIFSANQ--ALLAARAGASYVSPFLGRVDDISW 147 (223)
T ss_dssp CTTEEEEEES-----S-HHHH----------HHHHHHHHTTCCEEEEEECSHHH--HHHHHHTTCSEEEEBHHHHHHTTS
T ss_pred CCCEEEEECC-----C-HHHH----------HHHHHHHCCCCCEEEEEECCHHH--HHHHHHCCCCEEEEECCCHHHCCC
T ss_conf 7755999547-----7-8789----------99998611596527889758999--999998599299972100222367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 35643366688999876654156235207898987799999736996388425999999999409-999999999
Q gi|254780438|r 171 NPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGV-KEAVFCFRR 244 (261)
Q Consensus 171 ~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL-~~aI~~~~~ 244 (261)
++... +..+..... .+...-+|-|+-=-|.+.+...+ . -+.+-+-|.-.+..+-+..-+ ++++++|.+
T Consensus 148 d~~~~---i~~~~~~~~-~~~~~t~il~AS~r~~~~~~~~~-~-~G~d~~Tip~~v~~~l~~~~~t~~~~~~F~~ 216 (223)
T 1wx0_A 148 DGGEL---LREIVEMIQ-VQDLPVKVIAASIRHPRHVTEAA-L-LGADIATMPHAVFKQLLKHPLTDIGLKRFLE 216 (223)
T ss_dssp CHHHH---HHHHHHHHH-HTTCSCEEEEBCCCSHHHHHHHH-H-TTCSEEEECHHHHHHHTCCHHHHHHC-----
T ss_pred CCCHH---HHHHHHHHH-HCCCCCEEEEECCCCHHHHHHHH-H-CCCCEEEECHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 86246---899999998-51887116752258899999999-8-6999999299999999669655999999999
No 79
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=65.71 E-value=7.6 Score=18.90 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=26.1
Q ss_pred HHHHHHHHHHCCCCEEEEECCC---CCCCCCHHHHHHHHHHHCC
Q ss_conf 8999999997499899982478---8334888999998874000
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRP---DQRHIRYTDLPEIRRLIDE 66 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~---DrRHI~~~Dv~~l~~~~~~ 66 (261)
++++.+.+-++|-|||=+...+ +.-.....+...+++.+..
T Consensus 33 l~~~l~~~~e~GfdgVEl~~~~~~~~~~~~~~~~~~~lk~~l~~ 76 (335)
T 2qw5_A 33 VVAHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDS 76 (335)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999974989899715778733231687889999999998
No 80
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=64.52 E-value=8 Score=18.75 Aligned_cols=197 Identities=11% Similarity=0.027 Sum_probs=96.5
Q ss_pred CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC--
Q ss_conf 845332214432232207886899899999999749989998247883348889999988740001367415888348--
Q gi|254780438|r 2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP-- 79 (261)
Q Consensus 2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p-- 79 (261)
|.|||.|+--+ -..-++.++...+.++|.+||-++... +.|+..+++.+.+. ++....=+.+
T Consensus 1 ~~~~~a~~~~~--------~~~~pl~e~i~~a~~~GfdgIEl~~~~------~~~~~~~~~~l~~~--gl~~~~~~~~~~ 64 (260)
T 1k77_A 1 MPRFAANLSMM--------FTEVPFIERFAAARKAGFDAVEFLFPY------NYSTLQIQKQLEQN--HLTLALFNTAPG 64 (260)
T ss_dssp CCCEEEETTTS--------STTSCGGGHHHHHHHHTCSEEECSCCT------TSCHHHHHHHHHHT--TCEEEEEECCCC
T ss_pred CCEEEEECCCC--------CCCCCHHHHHHHHHHHCCCEEEECCCC------CCCHHHHHHHHHHC--CCCEEEEECCCC
T ss_conf 97145210102--------789999999999999499989978878------89999999999986--991899614544
Q ss_pred -----------C-----------HHHHHHHHHHCCCEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf -----------5-----------68999998507212897101655-533357822133378899999862026963899
Q gi|254780438|r 80 -----------N-----------ETFLNLCERYKPEQITLVPDDPH-QLTSDHGWDFLQNQALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 80 -----------~-----------~e~i~ia~~ikP~qvtLVPe~r~-elTTegGldv~~~~~~L~~~i~~l~~~girvSL 136 (261)
. ...++++......++.+.|-.+. ....+..|+ .-.+.+..+.......|+++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~gv~~~~ 142 (260)
T 1k77_A 65 DINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRA--VFIDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp CGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHH--HHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHHHCCCEEE
T ss_conf 45567542223767899999999999999986288714227887888889799999--9999999999999861973477
Q ss_pred EEC----------CCCCCHHHHHHHHCCCCEEE--ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE-----EEC
Q ss_conf 725----------44441479999740661465--1121110244435643366688999876654156235-----207
Q gi|254780438|r 137 FAD----------GNGNEHSLQAAKLTGADCIE--LYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQI-----NAG 199 (261)
Q Consensus 137 FID----------pd~~q~~i~~a~~~Gad~VE--lhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~V-----nAG 199 (261)
..- .++. ..+.....++.+.+- +.|+.+... .... ...+...........+.= --|
T Consensus 143 e~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~d~~~~~~~---~~d~---~~~~~~~~~~i~~vh~~D~~~r~~pG 215 (260)
T 1k77_A 143 EALSPGVKPHYLFSSQY-QALAIVEEVARDNVFIQLDTFHAQKV---DGNL---THLIRDYAGKYAHVQIAGLPDRHEPD 215 (260)
T ss_dssp CCCCTTTSTTBSCCSHH-HHHHHHHHHCCTTEEEEEEHHHHHHH---TCCH---HHHHHHTTTSEEEEEECCTTTCCCSS
T ss_pred ECCCCCCCCCCCCCCHH-HHHHHHHHCCCCCCCEEECHHHHHHC---CCCH---HHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 31442023242458899-99999996086435301020666652---7899---99999717857899868898999998
Q ss_pred CC-CCHHHHHHHHHHCCCCEEEEEH
Q ss_conf 89-8987799999736996388425
Q gi|254780438|r 200 HD-LTIQNIPNLINAIPYISEISVG 223 (261)
Q Consensus 200 Hg-Ln~~Nl~~~i~~Ip~I~EvsIG 223 (261)
.| +|+.-+-..++++.+=--+++-
T Consensus 216 ~G~id~~~i~~~L~~~GY~G~v~~E 240 (260)
T 1k77_A 216 DGEINYPWLFRLFDEVGYQGWIGCE 240 (260)
T ss_dssp SSSSCHHHHHHHHHHTTCCSCEEEC
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf 9654999999999983998469999
No 81
>1oya_A OLD yellow enzyme; oxidoreductase (flavoprotein); HET: FMN; 2.00A {Saccharomyces pastorianus} SCOP: c.1.4.1 PDB: 1oyb_A* 1oyc_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=63.22 E-value=8.5 Score=18.59 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=7.1
Q ss_pred HHHHHCCCCEEEECC
Q ss_conf 999740661465112
Q gi|254780438|r 148 QAAKLTGADCIELYT 162 (261)
Q Consensus 148 ~~a~~~Gad~VElhT 162 (261)
..|++.|+|.||||-
T Consensus 179 ~~A~~AGfDGVEIH~ 193 (400)
T 1oya_A 179 KNSIAAGADGVEIHS 193 (400)
T ss_dssp HHHHHTTCSEEEEEC
T ss_pred HHHHHCCCCEEEEEC
T ss_conf 999874978688741
No 82
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrolase, cellulose degradation; 1.60A {Clostridium cellulolyticum H10} SCOP: c.1.8.3
Probab=62.93 E-value=8.6 Score=18.56 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=20.7
Q ss_pred HHHHHHCCCCEEEEECC------CCCCCCCHHHHHHHHHHHC
Q ss_conf 99999749989998247------8833488899999887400
Q gi|254780438|r 30 GKIALQSGASGLTVHPR------PDQRHIRYTDLPEIRRLID 65 (261)
Q Consensus 30 a~~~~~~GadgITvH~R------~DrRHI~~~Dv~~l~~~~~ 65 (261)
-....++|.+.|-+-.. ++.-.|.+.-+..+++++.
T Consensus 67 i~~ik~~Gfn~vRiPv~w~~~~~~~~~~id~~~l~~v~~vV~ 108 (380)
T 1edg_A 67 IDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVN 108 (380)
T ss_dssp HHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999998699869965603540678888409899999999999
No 83
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=62.74 E-value=8.6 Score=18.53 Aligned_cols=165 Identities=14% Similarity=0.110 Sum_probs=88.1
Q ss_pred HHHHHHHHHCCCCEEEEECC-CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH-HHHHHHHHCCCEEEEEECCCCC
Q ss_conf 99999999749989998247-883348889999988740001367415888348568-9999985072128971016555
Q gi|254780438|r 27 VHIGKIALQSGASGLTVHPR-PDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET-FLNLCERYKPEQITLVPDDPHQ 104 (261)
Q Consensus 27 ~~~a~~~~~~GadgITvH~R-~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e-~i~ia~~ikP~qvtLVPe~r~e 104 (261)
.+-|..|.++|||-|=+-.- .-.|++..+....|.+.+... ....-+-.+++.+ ...++....++++-|-
T Consensus 12 ~~d~~~~~~~g~d~iGfi~~~~SpR~v~~~~a~~i~~~~~~~--~~~V~v~v~~~~~~i~~~~~~~~~~~vQlh------ 83 (205)
T 1nsj_A 12 LEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPF--VFRVGVFVNEEPEKILDVASYVQLNAVQLH------ 83 (205)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSS--SEEEEEESSCCHHHHHHHHHHHTCSEEEEC------
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCC--CEEEEEEECCHHHHHHHHHHHCCCEEEEEC------
T ss_conf 999999996799989784568999974999999987536777--418999705478887656651686068743------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHH-HHHHH-HHHHHH
Q ss_conf 3335782213337889999986202696389972544441479999740661465112111024443-56433-666889
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNN-PQQER-IFLNKL 182 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~-~~~~~-~el~~i 182 (261)
|-. ..++ +..++........+.-.+. ..+........+.+-+.+-.. .+.. ..... ..+..+
T Consensus 84 -----g~e---~~~~----~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~d~~~~--~~GGtG~~~dw~~~~~~ 147 (205)
T 1nsj_A 84 -----GEE---PIEL----CRKIAERILVIKAVGVSNE--RDMERALNYREFPILLDTKTP--EYGGSGKTFDWSLILPY 147 (205)
T ss_dssp -----SCC---CHHH----HHHHHTTSEEEEEEEESSH--HHHHHHGGGTTSCEEEEESCS--SSSSCCSCCCGGGTGGG
T ss_pred -----CCH---HHHH----HHHHHHCCCEEEEECCCCH--HHHHHHHHCCCCEEEEECCCC--CCCCCCCCCCHHHHHHH
T ss_conf -----742---1999----9986514541664034788--889998743563799855898--88988764548987565
Q ss_pred HHHHHHHHHCCCEEEECCCCCHHHHHHHHHHC-CCCEEEEE
Q ss_conf 99876654156235207898987799999736-99638842
Q gi|254780438|r 183 AITAQLAQKMDLQINAGHDLTIQNIPNLINAI-PYISEISV 222 (261)
Q Consensus 183 ~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~I-p~I~EvsI 222 (261)
..... .+=..=|||-+|+..+++.+ |.--.||=
T Consensus 148 ------~~~~~-~~~LAGGl~~~NV~~ai~~~~p~gvDvsS 181 (205)
T 1nsj_A 148 ------RDRFR-YLVLSGGLNPENVRSAIDVVRPFAVDVSS 181 (205)
T ss_dssp ------GGGSS-CEEEESSCCTTTHHHHHHHHCCSEEEESG
T ss_pred ------HHCCC-CEEEECCCCHHHHHHHHHHHCCCEEEEEC
T ss_conf ------53246-34761778878999999976899899708
No 84
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=61.80 E-value=9 Score=18.42 Aligned_cols=177 Identities=10% Similarity=0.055 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHH----HHHHHH-HHCCCEEEE
Q ss_conf 99899999999749989998-247883348889999988740001367415888348568----999998-507212897
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNET----FLNLCE-RYKPEQITL 97 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e----~i~ia~-~ikP~qvtL 97 (261)
.+.++.+....++|.+-|-+ +|.--. .|.......... ....+...-...... +.+... ...+....+
T Consensus 27 ~~k~~i~~~L~~aGv~~IEvg~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (293)
T 3ewb_X 27 KEKIQIALQLEKLGIDVIEAGFPISSP-----GDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIF 100 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECGGGCH-----HHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCH-----HHHHHHHHHHHH-HCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 999999999998396999996687886-----778899999865-12131012000353647999999875599779999
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC------CCCCHHHHHHHHCCCCEEEECCCCCHHHHH-
Q ss_conf 1016555333578221333788999998620269638997254------444147999974066146511211102444-
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG------NGNEHSLQAAKLTGADCIELYTGPYGACYN- 170 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp------d~~q~~i~~a~~~Gad~VElhTG~Ya~a~~- 170 (261)
++..........++............+...+..+..+..+... +.-...++.+.+.|+|+|-| |+.+.
T Consensus 101 ~~~s~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~i~l-----~DT~G~ 175 (293)
T 3ewb_X 101 LATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINI-----PDTVGY 175 (293)
T ss_dssp EECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEE-----ECSSSC
T ss_pred EEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE-----CCCCCC
T ss_conf 730799888875165999999999999887507767998113366763456899999999869979983-----352233
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHCCCEEEE--CCCCCHHHHHHHH
Q ss_conf -3564336668899987665415623520--7898987799999
Q gi|254780438|r 171 -NPQQERIFLNKLAITAQLAQKMDLQINA--GHDLTIQNIPNLI 211 (261)
Q Consensus 171 -~~~~~~~el~~i~~aa~~A~~lgL~VnA--GHgLn~~Nl~~~i 211 (261)
.+.+....+..+++.........+++|+ =-||-+.|.-..+
T Consensus 176 ~~P~~v~~~i~~~~~~l~~~~~i~l~~H~Hn~~GlA~aN~laA~ 219 (293)
T 3ewb_X 176 TNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAI 219 (293)
T ss_dssp CCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 58378999999999972320270577616884436999999999
No 85
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=61.05 E-value=9.2 Score=18.33 Aligned_cols=45 Identities=24% Similarity=0.257 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH-HHHHCCCCEEEECC
Q ss_conf 78899999862026963899725444414799-99740661465112
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFADGNGNEHSLQ-AAKLTGADCIELYT 162 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~-~a~~~Gad~VElhT 162 (261)
...|..+++.+++.+|++ +|.+|..+.+.++ .++++|+..++|..
T Consensus 214 ~~~l~~l~~~ik~~~i~~-if~e~~~~~~~~~~la~~~g~~v~~ld~ 259 (286)
T 3gi1_A 214 PRQLKEIQDFVKEYNVKT-IFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE-EEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCE-EEEECCCCHHHHHHHHHHHCCCEEEECC
T ss_conf 778999999999759989-9984888919999999982997688577
No 86
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=60.82 E-value=9.3 Score=18.31 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=58.8
Q ss_pred HCCCEEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCCCCHH
Q ss_conf 07212897-1016555333578221333788999998620269638997-254444147999974066146511211102
Q gi|254780438|r 90 YKPEQITL-VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTGPYGA 167 (261)
Q Consensus 90 ikP~qvtL-VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~ 167 (261)
+.|.++.| ++|.. +..+...+...+..+++.|++++|= .-...+ +++....+.+|.|-|...-...
T Consensus 138 l~~~rIvlEI~E~~----------~~~d~~~l~~~l~~lr~~G~~IALDDfG~g~s--~l~~l~~l~pD~IKlD~sli~~ 205 (431)
T 2bas_A 138 IELHRFVLEITEHN----------FEGDIEQLYHMLAYYRTYGIKIAVDNIGKESS--NLDRIALLSPDLLKIDLQALKV 205 (431)
T ss_dssp CCGGGEEEEECCTT----------CCSCHHHHHHHHHHHHTTTCEEEEEEETTTBC--CHHHHHHHCCSEEEEECTTTC-
T ss_pred CCHHHEEEEEECHH----------HHCCHHHHHHHHHHHHCCCCEEEEECCCCCCC--HHHHHHHCCCCEEEECHHHHHH
T ss_conf 79789689801213----------32169999999988645785899989999841--3999985899999999899852
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 44435643366688999876654156235207
Q gi|254780438|r 168 CYNNPQQERIFLNKLAITAQLAQKMDLQINAG 199 (261)
Q Consensus 168 a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAG 199 (261)
+..+.. .. .-+...+.+|+++|+.|-|-
T Consensus 206 ~~~~~~-~~---~il~~Lv~la~~~g~~vIaE 233 (431)
T 2bas_A 206 SQPSPS-YE---HVLYSISLLARKIGAALLYE 233 (431)
T ss_dssp ---CCH-HH---HHHHHHHHHHHHHTCEEEEE
T ss_pred HCCCHH-HH---HHHHHHHHHHHHCCCEEEEE
T ss_conf 404966-89---99999999999869989998
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=58.23 E-value=10 Score=18.01 Aligned_cols=12 Identities=8% Similarity=0.266 Sum_probs=6.4
Q ss_pred CHHHHHHHHHHH
Q ss_conf 889999988740
Q gi|254780438|r 53 RYTDLPEIRRLI 64 (261)
Q Consensus 53 ~~~Dv~~l~~~~ 64 (261)
.|+.+..+++++
T Consensus 79 ~d~~i~~~~~l~ 90 (729)
T 1o94_A 79 DEGDVRNLKAMT 90 (729)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
T ss_conf 999999999999
No 88
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics, PSI; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=57.98 E-value=10 Score=17.99 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=22.5
Q ss_pred HHCCCCCCC-CHHHHHHHHHHCCCCEEE--EECCCCC
Q ss_conf 220788689-989999999974998999--8247883
Q gi|254780438|r 16 RNRRNLPWP-NLVHIGKIALQSGASGLT--VHPRPDQ 49 (261)
Q Consensus 16 RnaRg~~~P-~~~~~a~~~~~~GadgIT--vH~R~Dr 49 (261)
|-+.+ .+| |=+.+-..|.+.|||+|- |++--|.
T Consensus 8 RG~~~-~~pENTl~af~~A~~~G~d~iE~DV~~TkDg 43 (248)
T 1zcc_A 8 RGANR-FAPENTFAAADLALQQGADYIELDVRESADG 43 (248)
T ss_dssp TTTTT-TSCSSSHHHHHHHHHTTCSEEEEEEEECTTC
T ss_pred CCCCC-CCCCHHHHHHHHHHHCCCCEEEEEEEEECCC
T ss_conf 99999-9974279999999985989999977790599
No 89
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=57.53 E-value=7.2 Score=19.08 Aligned_cols=33 Identities=6% Similarity=0.024 Sum_probs=15.8
Q ss_pred ECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 0789898779999973699638842599999999
Q gi|254780438|r 198 AGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 198 AGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
++.+.+-+.....+++ ..++=|.+|-++++|--
T Consensus 306 ~~G~~~~~~ae~~l~~-g~aDlV~~gR~~laDP~ 338 (376)
T 1icp_A 306 VAGGYDREDGNRALIE-DRADLVAYGRLFISNPD 338 (376)
T ss_dssp EESSCCHHHHHHHHHT-TSCSEEEESHHHHHCTT
T ss_pred EECCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCH
T ss_conf 9789899999999987-99775375399997930
No 90
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A
Probab=56.85 E-value=11 Score=17.86 Aligned_cols=127 Identities=12% Similarity=0.080 Sum_probs=74.3
Q ss_pred CCEEEEEECC----CHHHHH----HHH--HHCCCEEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE-
Q ss_conf 7415888348----568999----998--507212897-1016555333578221333788999998620269638997-
Q gi|254780438|r 70 KAELNIEGYP----NETFLN----LCE--RYKPEQITL-VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLF- 137 (261)
Q Consensus 70 ~~elNiEg~p----~~e~i~----ia~--~ikP~qvtL-VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLF- 137 (261)
+..+.+-..+ .++|.. +.. .+.|.++++ ++|. ....+.+.+...+..|++.|++++|=
T Consensus 104 ~~~l~inls~~~l~~~~~~~~l~~~l~~~~~~~~~lvlei~e~----------~~~~~~~~~~~~i~~L~~~G~~ialdd 173 (268)
T 3hv8_A 104 QTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEA----------DATSYLKQAKQLTQGLATLHCQAAISQ 173 (268)
T ss_dssp CEEEEEECCHHHHTCTTHHHHHHHHHHHHTCCSSCEEEEEEHH----------HHHHTHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCHHEEEEEECC----------HHHCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 8547875587764070667999999997089940202442000----------211018999998877630786266504
Q ss_pred ECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 25444414799997406614651121110244435643366688999876654156235207898987799999736
Q gi|254780438|r 138 ADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAI 214 (261)
Q Consensus 138 IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~I 214 (261)
...+.+ ++.....+.+|.|-|. +.|-....+.... ..++.....++++|+.|=| -|..-..-...+..+
T Consensus 174 fg~~~~--~l~~L~~l~~d~VKid-~~~~~~i~~~~~~----~~l~~li~~~~~~~~~vIa-egVE~~~~~~~l~~l 242 (268)
T 3hv8_A 174 FGCSLN--PFNALKHLTVQFIKID-GSFVQDLNQVENQ----EILKGLIAELHEQQKLSIV-PFVESASVLATLWQA 242 (268)
T ss_dssp ETCSSS--TTGGGGTCCCSEEEEC-GGGGSSTTSHHHH----HHHHHHHHHHHHTTCEEEE-CCCCSHHHHHHHHHH
T ss_pred CCCCCC--CHHHHHEEEEEEEEEC-HHHHHHCCCCHHH----HHHHHHHHHHHHCCCCEEE-EECCCHHHHHHHHHC
T ss_conf 899864--3233112550578784-8998516643366----8999999999984997899-947949999999976
No 91
>3ff4_A Uncharacterized protein; structural genomics, PSI- 2, protein structure initiative, midwest center for structural genomics; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=56.24 E-value=10 Score=18.05 Aligned_cols=77 Identities=5% Similarity=0.050 Sum_probs=47.2
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 97101655533357822133378899999862026963899725444414799997406614651121110244435643
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQE 175 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~ 175 (261)
.++|-.|..-+ =.|..+-.+.+ +-..---+++|+-|+.-...++.+.+.|+.+|=|..|.+..
T Consensus 33 ~V~pVnP~~~~-I~G~~~~~sl~--------~p~~iD~v~i~~p~~~~~~~v~e~~~~g~k~vw~q~G~~~e-------- 95 (122)
T 3ff4_A 33 EFIPVGRKKGE-VLGKTIINERP--------VIEGVDTVTLYINPQNQLSEYNYILSLKPKRVIFNPGTENE-------- 95 (122)
T ss_dssp CEEEESSSCSE-ETTEECBCSCC--------CCTTCCEEEECSCHHHHGGGHHHHHHHCCSEEEECTTCCCH--------
T ss_pred EEEEECCCCCC-CCEEEEEECCC--------CCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCH--------
T ss_conf 89998887761-00058997455--------67887579999588998999999985399999993698799--------
Q ss_pred HHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 3666889998766541562352
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQIN 197 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~Vn 197 (261)
++.+.|.+.|+.|=
T Consensus 96 --------~~~~~a~~~Gi~vi 109 (122)
T 3ff4_A 96 --------ELEEILSENGIEPV 109 (122)
T ss_dssp --------HHHHHHHHTTCEEE
T ss_pred --------HHHHHHHHCCCEEE
T ss_conf --------99999999699799
No 92
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=56.12 E-value=9.3 Score=18.30 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=31.0
Q ss_pred HHHHHHHCCCEEEEEEC------CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 99998507212897101------655533357822133378899999862026963899
Q gi|254780438|r 84 LNLCERYKPEQITLVPD------DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 84 i~ia~~ikP~qvtLVPe------~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL 136 (261)
+++..+.-=+.|+|+|= ..+++....|.... .+.+..+|..+++.|.+|.|
T Consensus 59 l~~m~~~G~N~Vrl~~~~~q~~~~s~~~~~~~~~t~~--de~v~~~i~~Ak~~GLkV~L 115 (343)
T 3civ_A 59 MRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVS--DDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCC--HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCCCCCCCEECCCCCCCC--HHHHHHHHHHHHHCCCEEEE
T ss_conf 9999985998899961003589988830036899848--89999999999976987998
No 93
>1xp3_A Endonuclease IV; NFO, DNA replication, DNA recombination, DNA repair, spine, structural genomics, structural proteomics in europe, hydrolase; 2.57A {Bacillus anthracis} SCOP: c.1.15.1
Probab=54.96 E-value=12 Score=17.66 Aligned_cols=172 Identities=15% Similarity=0.177 Sum_probs=93.1
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCC----CCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 998999999997499899982478833----4888999998874000136741588834856899999850721289710
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQR----HIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVP 99 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~DrR----HI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVP 99 (261)
-.+..+...|.+.||+.+-+-++.-|. =+.+.|+..+++.+.+ ..... +|.
T Consensus 23 ~~~~~a~~~a~~~g~~~~QiF~~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~--i~v 77 (307)
T 1xp3_A 23 KMLLAASEEAVSYGATTFMIYTGAPQNTRRKPIEELNIEAGRKHMEQ-----------------------NGIEE--III 77 (307)
T ss_dssp STHHHHHHHHHTTTCSSEEECSSCTTCCCCCCGGGGCHHHHHHHHHH-----------------------TTCCC--EEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-----------------------CCCCC--EEE
T ss_conf 37899999999769989999788967899999998999999999997-----------------------38985--697
Q ss_pred CCCCCCCCCCCCCHHH--HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCC-CCEEEECCCCCHHHHHHHHHHH
Q ss_conf 1655533357822133--378899999862026963899725444414799997406-6146511211102444356433
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQ--NQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTG-ADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 100 e~r~elTTegGldv~~--~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~G-ad~VElhTG~Ya~a~~~~~~~~ 176 (261)
=.+ -=+|+.+ +.+.....++.|.+ .++.|.++| ++.|=+|.|.|... .. +
T Consensus 78 Hap------YliNLas~~~~~~r~~Si~~l~~----------------~l~~a~~Lg~a~~vV~HpGs~~~~---~~--e 130 (307)
T 1xp3_A 78 HAP------YIINVGNTTKPETFQLGVDFLRM----------------EIERTSALGVAKQIVLHPGAHVGA---GA--D 130 (307)
T ss_dssp ECC------TTCCTTCCSCHHHHHHHHHHHHH----------------HHHHHHHSSSCCEEEECCEECTTS---CH--H
T ss_pred ECC------EEECCCCCCCHHHHHHHHHHHHH----------------HHHHHHHHCCCCEEEECCCCCCCC---CH--H
T ss_conf 145------02255665408999999999999----------------999999848898799899758998---98--9
Q ss_pred HHHHHHHHHHHHHHH------CCCEEEECCC----CCHHHHHHHHHHCCCCE----EEEEHHHHHHH-HHHHHHHHHHHH
Q ss_conf 666889998766541------5623520789----89877999997369963----88425999999-999409999999
Q gi|254780438|r 177 IFLNKLAITAQLAQK------MDLQINAGHD----LTIQNIPNLINAIPYIS----EISVGHAFAAT-ALECGVKEAVFC 241 (261)
Q Consensus 177 ~el~~i~~aa~~A~~------lgL~VnAGHg----Ln~~Nl~~~i~~Ip~I~----EvsIGHaiIse-Al~~GL~~aI~~ 241 (261)
..++++.++...+.+ +-|+.-||-| =+++.+..++..++.-. -+-.||+..+- -+..++++.+.+
T Consensus 131 ~~~~~i~~~l~~i~~~~~~~~illEn~ag~g~~lg~~~eel~~ii~~v~~~~~vgvClDt~H~~aaG~d~~~~~~~~~~~ 210 (307)
T 1xp3_A 131 AGIQQIIKGLNEVLTPDQTVNIALETMAGKGTECGRSFEEIAKIIDGVKYNEKLSVCFDTCHTHDAGYDIVNNFDGVLNE 210 (307)
T ss_dssp HHHHHHHHHHHHHCCTTCSSEEEEECCCCCTTEECCSHHHHHHHHHHCTTGGGEEEEEEHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHH
T ss_conf 99999999997654202465289864589888676789999999997077665056621133564157756779999999
Q ss_pred HHHHHH
Q ss_conf 999997
Q gi|254780438|r 242 FRRACG 247 (261)
Q Consensus 242 ~~~ii~ 247 (261)
|.+.+.
T Consensus 211 ~~~~~g 216 (307)
T 1xp3_A 211 FDKIVG 216 (307)
T ss_dssp HHHHTC
T ss_pred HHHHHH
T ss_conf 876302
No 94
>3mmw_A Endoglucanase; TIM barrel fold, hydrolase; 1.85A {Thermotoga maritima} PDB: 3mmu_A
Probab=54.76 E-value=12 Score=17.64 Aligned_cols=128 Identities=14% Similarity=0.202 Sum_probs=64.9
Q ss_pred CCCCCHHHHHHHHCCCCCCCCHH--HHHHHHHHCCCCEEEEECCCC-------CCCCCHHHHHHHHHHHCC-CCCCCEEE
Q ss_conf 33221443223220788689989--999999974998999824788-------334888999998874000-13674158
Q gi|254780438|r 5 VSVNLNAVAVLRNRRNLPWPNLV--HIGKIALQSGASGLTVHPRPD-------QRHIRYTDLPEIRRLIDE-QFPKAELN 74 (261)
Q Consensus 5 LsVNidhiAtLRnaRg~~~P~~~--~~a~~~~~~GadgITvH~R~D-------rRHI~~~Dv~~l~~~~~~-~~~~~elN 74 (261)
.||||... +.....+.+.... +.-....+.|..-|-+...-+ .--+.+.-+..|.+++.. ...++..-
T Consensus 14 ~G~N~~~~--~~~~~~~~w~~~~t~~~~~~i~~~G~N~VRipi~w~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vi 91 (317)
T 3mmw_A 14 RGINIGNA--LEAPNEGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVV 91 (317)
T ss_dssp EEEECCSS--TTSSSTTTTSCCCCTHHHHHHHHTTCCEEEECCCCGGGBCSSTTCCBCHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CEECCCCC--CCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 74503876--6678888778616299999999839998994777898368888874088999999999999997799899
Q ss_pred EEECCCH-----------H----HHHHHHHHC--CCEEE--EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 8834856-----------8----999998507--21289--710165553335782213337889999986202696389
Q gi|254780438|r 75 IEGYPNE-----------T----FLNLCERYK--PEQIT--LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRIS 135 (261)
Q Consensus 75 iEg~p~~-----------e----~i~ia~~ik--P~qvt--LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvS 135 (261)
|..-..+ . ...++.+++ |.-+. |.=|... ..+...-.+.++.++..+++.+-..-
T Consensus 92 ld~h~~~~~~~~~~~~~~~~~~~w~~ia~~yk~~~~v~~~el~NEP~~------~~~~~~~~~~~~~~~~aIR~~dp~~~ 165 (317)
T 3mmw_A 92 INIHHYEELMNDPEEHKERFLALWKQIADRYKDYPETLFFEILNEPHG------NLTPEKWNELLEEALKVIRSIDKKHT 165 (317)
T ss_dssp EECCCCHHHHHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCT------TSCHHHHHHHHHHHHHHHHTTCSSSC
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC------CCHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 974666455576321688899999999998579997899986106888------62389999999999999997499988
Q ss_pred EEECC
Q ss_conf 97254
Q gi|254780438|r 136 LFADG 140 (261)
Q Consensus 136 LFIDp 140 (261)
++++.
T Consensus 166 I~v~~ 170 (317)
T 3mmw_A 166 IIIGT 170 (317)
T ss_dssp EEECC
T ss_pred EEECC
T ss_conf 99747
No 95
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=54.53 E-value=12 Score=17.61 Aligned_cols=20 Identities=0% Similarity=-0.071 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHCCCCCEEEE
Q ss_conf 78899999862026963899
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSL 136 (261)
.+++..+|..+++.|++|-|
T Consensus 85 l~~~d~vId~a~~~Gi~viL 104 (515)
T 3icg_A 85 MKRVEEIANYAFDNDMYVII 104 (515)
T ss_dssp HHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
T ss_conf 99999999999978999999
No 96
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=54.03 E-value=12 Score=17.56 Aligned_cols=199 Identities=16% Similarity=0.140 Sum_probs=122.2
Q ss_pred CCCHHHHHHHHHHCCCCEEEEECCCCCCCC-CH-HHHHHHHHHHCCCCCCCEEEEEECCC--HHHHHHHHHH---CCCEE
Q ss_conf 899899999999749989998247883348-88-99999887400013674158883485--6899999850---72128
Q gi|254780438|r 23 WPNLVHIGKIALQSGASGLTVHPRPDQRHI-RY-TDLPEIRRLIDEQFPKAELNIEGYPN--ETFLNLCERY---KPEQI 95 (261)
Q Consensus 23 ~P~~~~~a~~~~~~GadgITvH~R~DrRHI-~~-~Dv~~l~~~~~~~~~~~elNiEg~p~--~e~i~ia~~i---kP~qv 95 (261)
-.|+-+..+.....-.+|+|--|-==+|.= .+ +-+..+.... ..++-+|-... ++|++-+..+ .|+-+
T Consensus 19 tad~~~Ik~~~~~~~i~GvTTNPsll~k~g~~~~~~~k~i~~~~-----~~~~s~ev~~~~~~em~~~a~~i~~~~~nv~ 93 (230)
T 1vpx_A 19 TANLEEIKKGVEWGIVDGVTTNPTLISKEGAEFKQRVKEICDLV-----KGPVSAEVVSLDYEGMVREARELAQISEYVV 93 (230)
T ss_dssp CCCHHHHHHHHHTTCCCEEECCC-----------CHHHHHHHHH-----CSCEEEECSCCSHHHHHHHHHHHHTTCTTEE
T ss_pred CCCHHHHHHHHCCCCCCEECCCHHHHHHCCCCHHHHHHHHHHHC-----CCCCEEEEEHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 68999999985579956483088999874999899999999744-----7764167548778988999999860487618
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 97101655533357822133378899999862026963899725444414799997406614651121110244435643
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQE 175 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~ 175 (261)
-=+|-.. + | -+.++.|++.||++.+=.=-++.| .-.|...|++.|-.|.|..++.-.++..
T Consensus 94 VKIP~t~-----~-g----------l~ai~~L~~~Gi~~n~Tavfs~~Q--a~~Aa~aga~yispf~gR~~d~g~d~~~- 154 (230)
T 1vpx_A 94 IKIPMTP-----D-G----------IKAVKTLSAEGIKTNVTLVFSPAQ--AILAAKAGATYVSPFVGRMDDLSNDGMR- 154 (230)
T ss_dssp EEEESSH-----H-H----------HHHHHHHHHTTCCEEEEEECSHHH--HHHHHHHTCSEEEEBHHHHHHTTSCHHH-
T ss_pred EEECCCH-----H-H----------HHHHHHHHHCCCCEEEEEECCHHH--HHHHHHCCCCEEEEEEEEHHCCCCCCHH-
T ss_conf 9805747-----7-8----------999999605399568875067899--9999864895487775101114677616-
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q ss_conf 366688999876654156235207898987799999736996388425999999999409-999999999997410
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGV-KEAVFCFRRACGQHL 250 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL-~~aI~~~~~ii~~~~ 250 (261)
.+..+....+ .+...-++-++-=-|-+++.... . -+.+-+-|.-.++.+.+...+ +++|++|.+--++..
T Consensus 155 --~i~~~~~~~~-~~~~~tkIL~AS~R~~~~i~~a~-~-~G~d~iTip~~vl~~l~~~~~t~~~v~~F~~D~~k~~ 225 (230)
T 1vpx_A 155 --MLGEIVEIYN-NYGFETEIIAASIRHPMHVVEAA-L-MGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKKYL 225 (230)
T ss_dssp --HHHHHHHHHH-HHTCSCEEEEBSCCSHHHHHHHH-H-HTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHH-HCCCCCEEEECCCCCHHHHHHHH-H-CCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf --6999999998-46888789971638999999999-7-6999999899999999779854999999999999998
No 97
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=53.53 E-value=12 Score=17.50 Aligned_cols=45 Identities=18% Similarity=0.122 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH-HHHHCCCCEEEECC
Q ss_conf 78899999862026963899725444414799-99740661465112
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFADGNGNEHSLQ-AAKLTGADCIELYT 162 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~-~a~~~Gad~VElhT 162 (261)
...+..+++.+++.+++ .+|.+|..+.+.++ .|+++|+..+++.+
T Consensus 225 ~~~l~~l~~~ik~~~v~-~if~e~~~~~~~~~~la~e~g~~~~~l~~ 270 (312)
T 2o1e_A 225 AASLAKLKTYAKEHNVK-VIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp HHHHHHHHHHTTSSCCC-EEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHHHCCCC-EEEEECCCCCHHHHHHHHHHCCCEEEECC
T ss_conf 56799999999983997-89982898909999999982997664456
No 98
>3lmz_A Putative sugar isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=53.40 E-value=12 Score=17.49 Aligned_cols=214 Identities=11% Similarity=0.014 Sum_probs=108.3
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE-----EEEE
Q ss_conf 45332214432232207886899899999999749989998247883348889999988740001367415-----8883
Q gi|254780438|r 3 TSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL-----NIEG 77 (261)
Q Consensus 3 t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el-----NiEg 77 (261)
.+||++-- +.|+ -++-++...+.++|.++|-+-+...--...+.++..+++.+... .+.+ +...
T Consensus 18 ~~lg~~~~---~~~~------~~le~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~--gv~~~~~~~~~~~ 86 (257)
T 3lmz_A 18 FHLGMAGY---TFVN------FDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAH--KVTGYAVGPIYMK 86 (257)
T ss_dssp SEEEECGG---GGTT------SCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHT--TCEEEEEEEEEEC
T ss_pred EEEEEEEH---HCCC------CCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC--CCEEEECCCCCCC
T ss_conf 68999804---3359------99999999999839998997157777668999999999998763--9867721677446
Q ss_pred CC--CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC-C----CCCHHHHHH
Q ss_conf 48--5689999985072128971016555333578221333788999998620269638997254-4----441479999
Q gi|254780438|r 78 YP--NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG-N----GNEHSLQAA 150 (261)
Q Consensus 78 ~p--~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp-d----~~q~~i~~a 150 (261)
.. ....++++....-..++..|. .+.|..+....++.||++.+=..+ . +.+. ....
T Consensus 87 ~~~~~~~~i~~a~~lg~~~i~~~~~----------------~~~l~~l~~~a~~~gi~l~iE~~~~~~~~~~~~~-~~~~ 149 (257)
T 3lmz_A 87 SEEEIDRAFDYAKRVGVKLIVGVPN----------------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDAT-DVWV 149 (257)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEEC----------------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHH-HHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCC----------------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHH-HHHH
T ss_conf 2999999999999859987991667----------------9999999999998299999982477542221379-9999
Q ss_pred HHCC---CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEECC-CCCHHHHHHHHHHCCCCE
Q ss_conf 7406---61465112111024443564336668899987665415--------62352078-989877999997369963
Q gi|254780438|r 151 KLTG---ADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKM--------DLQINAGH-DLTIQNIPNLINAIPYIS 218 (261)
Q Consensus 151 ~~~G---ad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~l--------gL~VnAGH-gLn~~Nl~~~i~~Ip~I~ 218 (261)
.... .=.+-+-||.+..+-.+ ....++.+..-..+.|-. +..+--|. .+||..+-..+.++.+=-
T Consensus 150 ~~~~~~p~lgi~~D~~h~~~~~~d---~~~~~~~~~~~i~~vH~~d~~~~~~~~~~~~~G~G~id~~~il~~L~~~gy~G 226 (257)
T 3lmz_A 150 HTKDLDPRIGMCLDVGHDLRNGCD---PVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPALIRMMREVNYTG 226 (257)
T ss_dssp HHTTSCTTEEEEEEHHHHHHTTCC---HHHHHHHHGGGEEEEEECEESCSSTTCCEECTTSSSCCHHHHHHHHHHTTCCS
T ss_pred HHHCCCCCEEEEEECHHHHHCCCC---HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf 963899876799843066523875---05555432676338998205233366753089997659999999999839976
Q ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88425999999999409999999999997
Q gi|254780438|r 219 EISVGHAFAATALECGVKEAVFCFRRACG 247 (261)
Q Consensus 219 EvsIGHaiIseAl~~GL~~aI~~~~~ii~ 247 (261)
=+++=+.--.+.-+-++.+++.-+|++++
T Consensus 227 ~islE~~~~~~d~~~~~~~~~~~lk~l~~ 255 (257)
T 3lmz_A 227 MCSLEYEKDMKDPFLGIAESIGYFKAVSD 255 (257)
T ss_dssp EEEECCCSSTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999857999989999999999999985
No 99
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=52.56 E-value=8.6 Score=18.55 Aligned_cols=72 Identities=8% Similarity=0.005 Sum_probs=32.3
Q ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHH
Q ss_conf 40661465112111024443564336668899987665415623520789898779999973699638842599999999
Q gi|254780438|r 152 LTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATAL 231 (261)
Q Consensus 152 ~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl 231 (261)
..|.+.++++.+.|...... .. ..+.+..+.+.+..+-+.- +.+-+.....++. ...+=|.+|-.+|+|-=
T Consensus 266 ~~~v~~~~~~~~~~~~~~~~---~~---~~~~~~i~~~~~~pvi~~G--~~~~~~ae~~l~~-g~aDlV~~gR~liadPd 336 (377)
T 2r14_A 266 RRGLAYLHFNEPDWIGGDIT---YP---EGFREQMRQRFKGGLIYCG--NYDAGRAQARLDD-NTADAVAFGRPFIANPD 336 (377)
T ss_dssp HTTCSEEEEECCC------C---CC---TTHHHHHHHHCCSEEEEES--SCCHHHHHHHHHT-TSCSEEEESHHHHHCTT
T ss_pred HHCCCEEEEECCCCCCCCCC---CH---HHHHHHHHHHCCCCEEEEC--CCCHHHHHHHHHC-CCCCCHHHHHHHHHCCC
T ss_conf 73252356504665578866---01---9999999986388789968--8499999999986-99747186499997910
Q ss_pred H
Q ss_conf 9
Q gi|254780438|r 232 E 232 (261)
Q Consensus 232 ~ 232 (261)
+
T Consensus 337 ~ 337 (377)
T 2r14_A 337 L 337 (377)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 100
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 2hl1_A*
Probab=52.40 E-value=13 Score=17.38 Aligned_cols=49 Identities=12% Similarity=0.198 Sum_probs=32.1
Q ss_pred HHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 999974066146511211102444356433666889998766541562352
Q gi|254780438|r 147 LQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQIN 197 (261)
Q Consensus 147 i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~Vn 197 (261)
.+.+..+|+++|=|| |||++-.+...-...++-++.......+.|+.|.
T Consensus 65 ~~~a~kv~~~~ivlY--PyAHLSs~La~P~~A~~vL~~le~~L~~~g~eV~ 113 (143)
T 2hl0_A 65 SKVAEQVKAENVFVY--PFAHLSSELAKPSVAMDILNRVYQGLKERGFNVG 113 (143)
T ss_dssp HHHHHHHTCCEEEEE--ECGGGCSSBCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHCCCCEEEEE--CCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 999986499879993--7111168778968999999999999985896599
No 101
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 1g6c_A* 1g4e_A* 1g69_A* 1g4s_A* 1g4p_A* 1g67_A*
Probab=52.28 E-value=13 Score=17.37 Aligned_cols=191 Identities=17% Similarity=0.130 Sum_probs=108.3
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCC-CCCCCHHHH----HHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 689989999999974998999824788-334888999----998874000136741588834856899999850721289
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPD-QRHIRYTDL----PEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~D-rRHI~~~Dv----~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt 96 (261)
..+++++.+..++++|++- +++|+- .....++.. ..++++|..+ +++|=|-. ..++|.++..+-|-
T Consensus 29 ~~~~~~~~v~~al~~Gv~~--vqlR~K~~~~~~~~~~~~la~~l~~~~~~~--~~~liInd-----~~~lA~~~~adGvH 99 (227)
T 2tps_A 29 TKADPVTVVQKALKGGATL--YQFREKGGDALTGEARIKFAEKAQAACREA--GVPFIVND-----DVELALNLKADGIH 99 (227)
T ss_dssp CSSCHHHHHHHHHHHTCSE--EEECCCSTTCCCHHHHHHHHHHHHHHHHHH--TCCEEEES-----CHHHHHHHTCSEEE
T ss_pred CCCCHHHHHHHHHHCCCCE--EEECCCCCCCCCHHHHHHHHHHHHHHHHHH--CCEEEECC-----CHHHHHHHCCCEEE
T ss_conf 3568899999999889989--998679988688999999999999999982--99799858-----59999871998899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH-H
Q ss_conf 710165553335782213337889999986202696389972544441479999740661465112111024443564-3
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ-E 175 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~-~ 175 (261)
| .+........-..+.. . -++.-.. +.+ .+..|.+.|+|.|=+ ||.-..-.++.. .
T Consensus 100 l----------------~~~d~~~~~~r~~~~~-~-iig~S~h-~~~--e~~~A~~~g~dYv~~--gpvf~T~sK~~~~~ 156 (227)
T 2tps_A 100 I----------------GQEDANAKEVRAAIGD-M-ILGVSAH-TMS--EVKQAEEDGADYVGL--GPIYPTETKKDTRA 156 (227)
T ss_dssp E----------------CTTSSCHHHHHHHHTT-S-EEEEEEC-SHH--HHHHHHHHTCSEEEE--CCSSCCCSSSSCCC
T ss_pred E----------------CCCCCCHHHHHHHCCC-E-EEEEECC-CHH--HHHHHHHCCCCEEEE--CCCCCCCCCCCCCC
T ss_conf 8----------------9654418999874265-5-9999563-689--999998679987985--47500466775422
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3666889998766541562352078989877999997369963884259999999994099999999999974105
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
..-+..+..... ....+-|-|==|+|.+|+..+. . -+.+=+-+.-+|... ..-++++++++++++..+.
T Consensus 157 ~~g~~~~~~~~~--~~~~iPv~AiGGI~~~n~~~~~-~-~Ga~gvAvis~I~~a---~dp~~~~~~~~~~i~~~~~ 225 (227)
T 2tps_A 157 VQGVSLIEAVRR--QGISIPIVGIGGITIDNAAPVI-Q-AGADGVSMISAISQA---EDPESAARKFREEIQTYKT 225 (227)
T ss_dssp CCTTHHHHHHHH--TTCCCCEEEESSCCTTTSHHHH-H-TTCSEEEESHHHHTS---SCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH--HCCCCCEEEECCCCHHHHHHHH-H-HCCCEEEEEHHHHCC---CCHHHHHHHHHHHHHHHHC
T ss_conf 340478899998--5579987987788999999999-8-399889982997679---9999999999999999863
No 102
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=52.14 E-value=13 Score=17.36 Aligned_cols=198 Identities=10% Similarity=0.029 Sum_probs=98.4
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE-EEEECC---
Q ss_conf 5332214432232207886899899999999749989998247883348889999988740001367415-888348---
Q gi|254780438|r 4 SVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL-NIEGYP--- 79 (261)
Q Consensus 4 ~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el-NiEg~p--- 79 (261)
+||+++ -.+++.-. ..++-++.+.+.++|.+||-+-+..+. ...+.+...+++.+.+. ++++ .+-..+
T Consensus 14 ~~g~~l---ys~~~~~~--~~d~~~~L~~~~e~G~~~IEl~~~~~~-~~~~~~~~elk~~l~~~--gL~i~s~~~~~~~~ 85 (303)
T 3l23_A 14 EIGLQI---YSLSQELY--KGDVAANLRKVKDMGYSKLELAGYGKG-AIGGVPMMDFKKMAEDA--GLKIISSHVNPVDT 85 (303)
T ss_dssp CCEEEG---GGGGGGGG--SSCHHHHHHHHHHTTCCEEEECCEETT-EETTEEHHHHHHHHHHT--TCEEEEEECCCBCT
T ss_pred CEEEEE---EECCCCCC--CCCHHHHHHHHHHHCCCEEEECCCCCC-CCCCCCHHHHHHHHHHC--CCCEEECCCCCCCC
T ss_conf 189771---42231011--499999999999959998998887776-66899999999999987--99755645466543
Q ss_pred ------------------------CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf ------------------------56899999850721289710165553335782213337889999986202696389
Q gi|254780438|r 80 ------------------------NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRIS 135 (261)
Q Consensus 80 ------------------------~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvS 135 (261)
....++++..+....++. |-.+.. +++..|+- -.+.+..+....++.|+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~lG~~~v~~-~~~~~~-~~~~~~~~--~~~~l~~~~~~a~~~Gv~~~ 161 (303)
T 3l23_A 86 SISDPFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQ-PMMPTI-TTHDEAKL--VCDIFNQASDVIKAEGIATG 161 (303)
T ss_dssp TCSSTTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEE-CSCCCC-CSHHHHHH--HHHHHHHHHHHHHHTTCTTC
T ss_pred CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEC-CCCCCC-CCHHHHHH--HHHHHHHHHHHHHHCCCEEE
T ss_conf 346510110022489999999999999999999859498973-899875-66899999--99999999999986798599
Q ss_pred EEECCCCC---------------------------CHHHHHHHHCCCCEE--EECCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97254444---------------------------147999974066146--5112111024443564336668899987
Q gi|254780438|r 136 LFADGNGN---------------------------EHSLQAAKLTGADCI--ELYTGPYGACYNNPQQERIFLNKLAITA 186 (261)
Q Consensus 136 LFIDpd~~---------------------------q~~i~~a~~~Gad~V--ElhTG~Ya~a~~~~~~~~~el~~i~~aa 186 (261)
+=.-|... ...-.....++.+.+ .+-+|.+.....++.+ .++++..-.
T Consensus 162 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ll~~~~~~~v~~~~D~~h~~~~~~d~~~---~~~~~~~~i 238 (303)
T 3l23_A 162 FGYHNHNMEFNRVATKEQQEKVKGNPFAAFMKVGDQIYDLMLKDTDPSKVYFEMDVYWTVMGQNDPVE---YMQKHPDRI 238 (303)
T ss_dssp EEEECCSGGGSEECCTTTC----------CCCCSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHH---HHHHCTTTE
T ss_pred EEECCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHH---HHHHHCCEE
T ss_conf 97258277641004665443201345567555888999999997093440320133420116888789---998731706
Q ss_pred HHHHHCCCEEEECCC-CCHHHHHHHHHHCCC
Q ss_conf 665415623520789-898779999973699
Q gi|254780438|r 187 QLAQKMDLQINAGHD-LTIQNIPNLINAIPY 216 (261)
Q Consensus 187 ~~A~~lgL~VnAGHg-Ln~~Nl~~~i~~Ip~ 216 (261)
.+.|-.....-.|+| ++|..+-..+.++++
T Consensus 239 ~~vHikD~~~~~G~G~id~~~i~~~L~~~gy 269 (303)
T 3l23_A 239 KVLHIKDRAVFGQSGMMNFEMIFKQMYANGI 269 (303)
T ss_dssp EEEEECCSSSTTSSSCCCHHHHHHHHHHHTC
T ss_pred EEEEECCCCCCCCCCEECHHHHHHHHHHCCC
T ss_conf 5897544789999834589999999998499
No 103
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=51.28 E-value=13 Score=17.27 Aligned_cols=188 Identities=12% Similarity=0.131 Sum_probs=115.5
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH-HHHHCCCCC--CCEEEEEECCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 89999999974998999824788334888999998-874000136--741588834856899999850721289710165
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEI-RRLIDEQFP--KAELNIEGYPNETFLNLCERYKPEQITLVPDDP 102 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l-~~~~~~~~~--~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r 102 (261)
+.....-|++.++.-|--.-...+++.-.+.+... +... .++. .+-+++-=..+.+++.-+++.-=+.|-+ |.
T Consensus 30 ~~avi~AAe~~~sPvIlq~s~~~~~~~g~~~~~~~~~~~a-~~~~~Vpv~lHLDH~~~~e~i~~ai~~GftSVMi--Dg- 105 (307)
T 3n9r_A 30 LNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMC-ERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMI--DA- 105 (307)
T ss_dssp HHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHH-HHSTTSCEEEEEEEECSHHHHHHHHHHTCSEEEE--CC-
T ss_pred HHHHHHHHHHHCCCEEEECCHHHHHHCCHHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEE--EC-
T ss_conf 9999999999799989984876875679899999999999-7569980899717879999999999719986886--09-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE--------------------EEEECCCCCCHHHHHHHHCCCCEEEECC
Q ss_conf 55333578221333788999998620269638--------------------9972544441479999740661465112
Q gi|254780438|r 103 HQLTSDHGWDFLQNQALLTKTVARLHNLGSRI--------------------SLFADGNGNEHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 103 ~elTTegGldv~~~~~~L~~~i~~l~~~girv--------------------SLFIDpd~~q~~i~~a~~~Gad~VElhT 162 (261)
--|++..|-..-+++++..+..|+-| |+|-| |+| ..+..+++|+|+.=+=-
T Consensus 106 ------S~lp~eeNi~~T~~vve~Ah~~gv~VEaElG~igg~e~~~~~~~~~~~~T~--Pee-a~~Fv~~TgvD~LAvai 176 (307)
T 3n9r_A 106 ------SHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVN--PKE-AEQFVKESQVDYLAPAI 176 (307)
T ss_dssp ------TTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCC--HHH-HHHHHHHHCCSEEEECS
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC--HHH-HHHHHHHHCCCEECHHH
T ss_conf ------989999999999999999825398289874121576787665553212479--899-99998710887342211
Q ss_pred CCCHHHHHH---HHHHHHHHHHHHHHH-----------------HHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEE
Q ss_conf 111024443---564336668899987-----------------665415623520789898779999973699638842
Q gi|254780438|r 163 GPYGACYNN---PQQERIFLNKLAITA-----------------QLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISV 222 (261)
Q Consensus 163 G~Ya~a~~~---~~~~~~el~~i~~aa-----------------~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsI 222 (261)
|.---.|.. ++..-.-|++|+++. +.....|+.+|-|.|+..+.+...++ -+|.-+||
T Consensus 177 Gn~HG~yk~~~~p~ld~~~l~~I~~~~~vPLVlHG~S~v~d~~~~~~~~~~~~~HG~sG~p~e~i~~ai~--~Gi~KiNi 254 (307)
T 3n9r_A 177 GTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVK--GGINKVNT 254 (307)
T ss_dssp SCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHH--TTEEEEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH--CCCEEEEE
T ss_conf 2233677788987768999999885058865547887661777776401233467888999999999997--79469997
Q ss_pred HHHHHH
Q ss_conf 599999
Q gi|254780438|r 223 GHAFAA 228 (261)
Q Consensus 223 GHaiIs 228 (261)
|--+--
T Consensus 255 ~T~l~~ 260 (307)
T 3n9r_A 255 DTDLRI 260 (307)
T ss_dssp CHHHHH
T ss_pred CHHHHH
T ss_conf 879999
No 104
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp}
Probab=49.48 E-value=14 Score=17.08 Aligned_cols=67 Identities=13% Similarity=0.171 Sum_probs=36.1
Q ss_pred HHHHHHHHHH--CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------CCCH
Q ss_conf 6899999850--721289710165553335782213337889999986202696389972544-------------4414
Q gi|254780438|r 81 ETFLNLCERY--KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGN-------------GNEH 145 (261)
Q Consensus 81 ~e~i~ia~~i--kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd-------------~~q~ 145 (261)
+++-+..... .-..+.||| |=|.|- .+|...++.. + +...+-||+||.|- .-+.
T Consensus 11 ~el~~~~~~~r~~~~~IgfVP-------TMGaLH-~GHlsLI~~A-~--~~~~vvVSIFVNP~QF~~~eD~~~YPr~~~~ 79 (285)
T 3mxt_A 11 KEAKQIVKDWKSHQLSIGYVP-------TMGFLH-DGHLSLVKHA-K--TQDKVIVSIFVNPMQFGPNEDFSSYPRDLER 79 (285)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-------ECSSCC-HHHHHHHHHH-T--TSSEEEEEECCCGGGCCTTSCTTTSCCCHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEC-------CCCCHH-HHHHHHHHHH-H--HCCCEEEEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 999999999997599399984-------863065-9999999999-7--6598699998361127876523469999789
Q ss_pred HHHHHHHCCCCEE
Q ss_conf 7999974066146
Q gi|254780438|r 146 SLQAAKLTGADCI 158 (261)
Q Consensus 146 ~i~~a~~~Gad~V 158 (261)
+++.+++.|+|.|
T Consensus 80 D~~~l~~~gvd~v 92 (285)
T 3mxt_A 80 DIKMCQDNGVDMV 92 (285)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHCCCCEE
T ss_conf 9999986799899
No 105
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=49.43 E-value=14 Score=17.08 Aligned_cols=94 Identities=19% Similarity=0.218 Sum_probs=50.3
Q ss_pred HHHHHHHHHHCCCC--CEEEEEECCCCCCHHHHHHHHCCCCEEEECCCC-CHHH-------------------HHHHHHH
Q ss_conf 88999998620269--638997254444147999974066146511211-1024-------------------4435643
Q gi|254780438|r 118 ALLTKTVARLHNLG--SRISLFADGNGNEHSLQAAKLTGADCIELYTGP-YGAC-------------------YNNPQQE 175 (261)
Q Consensus 118 ~~L~~~i~~l~~~g--irvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~-Ya~a-------------------~~~~~~~ 175 (261)
..+++++..+++.+ +.+-.|-. +.. ..++...++|+|++-+.... ...+ +..+++.
T Consensus 231 p~~k~i~~~~~~~~~~~~i~~~~~-~~~-~~~~~~~~~g~~~ls~d~~~dl~~a~~~~~~~~~lqGNvdP~~L~g~~e~i 308 (353)
T 1j93_A 231 PYLKQIVDSVKLTHPNLPLILYAS-GSG-GLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFI 308 (353)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEECS-SCT-TTGGGGGGGCCSEEECCTTSCHHHHHHHTCSSSEEECCBCGGGGGSCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEECC-CCH-HHHHHHHCCCCCEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHCCCHHHH
T ss_conf 899999999886379998784047-607-777665335752553631121799999819980799478867876999999
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCC----CHHHHHHHHHHCCC
Q ss_conf 366688999876654156235207898----98779999973699
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQINAGHDL----TIQNIPNLINAIPY 216 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~VnAGHgL----n~~Nl~~~i~~Ip~ 216 (261)
. +..+++.+.+..-|.-+|-|||+ ..+|+..++..+..
T Consensus 309 ~---~~~~~~l~~~~~~~~Il~~Gcgi~p~tp~env~a~v~avr~ 350 (353)
T 1j93_A 309 T---NRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKG 350 (353)
T ss_dssp H---HHHHHHHHHHCSSSEEBCBSSCCCTTCCHHHHHHHHHHHHT
T ss_pred H---HHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9---99999999639999089699977999999999999999986
No 106
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM- barrel, rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=49.24 E-value=14 Score=17.06 Aligned_cols=74 Identities=22% Similarity=0.165 Sum_probs=47.4
Q ss_pred EEEEE-CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-EEEEEECCCC------CC
Q ss_conf 58883-4856899999850721289710165553335782213337889999986202696-3899725444------41
Q gi|254780438|r 73 LNIEG-YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGS-RISLFADGNG------NE 144 (261)
Q Consensus 73 lNiEg-~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~gi-rvSLFIDpd~------~q 144 (261)
.|+=. -|.+++++.+.+.+|+.|++== |- ..+...++.++..|++.+. .+.+|+--.. ..
T Consensus 35 ~~LG~~~p~e~iv~~~~~~~~d~V~iS~-------~~-----~~~~~~~~~~i~~L~~~~~~~v~iivGG~~~~~~~~~~ 102 (137)
T 1ccw_A 35 VNIGVLSPQELFIKAAIETKADAILVSS-------LY-----GQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWP 102 (137)
T ss_dssp EEEEEEECHHHHHHHHHHHTCSEEEEEE-------CS-----STHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHH
T ss_pred EECCCCCCHHHHHHHHHHHCCCEEEEEE-------CC-----CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHH
T ss_conf 9778666999999999983998788761-------13-----44557799999999974999997999788788744418
Q ss_pred HHHHHHHHCCCCEE
Q ss_conf 47999974066146
Q gi|254780438|r 145 HSLQAAKLTGADCI 158 (261)
Q Consensus 145 ~~i~~a~~~Gad~V 158 (261)
......+++|+|+|
T Consensus 103 ~~~~~l~~~G~~~v 116 (137)
T 1ccw_A 103 DVEKRFKDMGYDRV 116 (137)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCCEE
T ss_conf 89999997598889
No 107
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=48.77 E-value=11 Score=17.74 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=14.5
Q ss_pred HHHHHHCCCCE--EEECCCCCHHHHHHH
Q ss_conf 99997406614--651121110244435
Q gi|254780438|r 147 LQAAKLTGADC--IELYTGPYGACYNNP 172 (261)
Q Consensus 147 i~~a~~~Gad~--VElhTG~Ya~a~~~~ 172 (261)
-.+|...|+|. ||-|.-|= +|+.+.
T Consensus 208 a~aA~a~G~dGl~iE~H~dP~-~AlsD~ 234 (267)
T 2nwr_A 208 IRAAVAVGCDGVFMETHPEPE-KALSDA 234 (267)
T ss_dssp HHHHHHHCCSEEEEEEESCGG-GCSSCT
T ss_pred HHHHHHHCCCEEEEEECCCCC-CCCCCC
T ss_conf 999998399879998379834-367860
No 108
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural genomics; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=47.52 E-value=15 Score=16.88 Aligned_cols=12 Identities=25% Similarity=0.512 Sum_probs=3.8
Q ss_pred HHHCCCCCEEEE
Q ss_conf 862026963899
Q gi|254780438|r 125 ARLHNLGSRISL 136 (261)
Q Consensus 125 ~~l~~~girvSL 136 (261)
+.|+++||||.+
T Consensus 382 ~~Lr~~Girve~ 393 (456)
T 3lc0_A 382 RRLRDAGRSADI 393 (456)
T ss_dssp HHHHHTTCCEEE
T ss_pred HHHHHCCCCEEE
T ss_conf 999977998999
No 109
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=47.51 E-value=15 Score=16.88 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=66.1
Q ss_pred HHHHHHHHCCCCEEEE----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC------------------H----
Q ss_conf 9999999749989998----2478833488899999887400013674158883485------------------6----
Q gi|254780438|r 28 HIGKIALQSGASGLTV----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN------------------E---- 81 (261)
Q Consensus 28 ~~a~~~~~~GadgITv----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~------------------~---- 81 (261)
+.-.+..++|..-|-+ -|.++ +-.-+.+..+.+-...+--++-+++-.+|+ +
T Consensus 31 d~~~~lk~~G~N~VRi~vW~~P~~g--~~~~~~~~~~~~~a~~~Gm~v~ldlH~sd~Wadp~~q~~p~~w~~~~~~~~~~ 108 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPSDG--SYDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKW 108 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCTTC--TTCHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHH
T ss_pred CHHHHHHHCCCCEEEEEEEECCCCC--CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCHHHHH
T ss_conf 5999999849997998541279888--67999999999999988998999647788766866678862010034035899
Q ss_pred H----HHHHHHH-----HCCCEEEEEECCCCCCCCCCCCCH------HHHHHHHHHHHHHHCC----CCCEEEEEECCCC
Q ss_conf 8----9999985-----072128971016555333578221------3337889999986202----6963899725444
Q gi|254780438|r 82 T----FLNLCER-----YKPEQITLVPDDPHQLTSDHGWDF------LQNQALLTKTVARLHN----LGSRISLFADGNG 142 (261)
Q Consensus 82 e----~i~ia~~-----ikP~qvtLVPe~r~elTTegGldv------~~~~~~L~~~i~~l~~----~girvSLFIDpd~ 142 (261)
. ...++.+ +.|..+.+ =+|++...-|.. ......++..+...++ ..+++.+-.+...
T Consensus 109 ~~~~~~~~v~~~~~~~g~~~~~vqi----gne~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i~~~~~~~~ 184 (334)
T 1fob_A 109 QLYNYTLEVCNTFAENDIDIEIISI----GNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGW 184 (334)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEE----SSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEE----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 9999999999999857998657982----676466645446886479999999999999998751267726987226788
Q ss_pred CCH----HHHHHHHC------CCCEEEECCCCCHHH
Q ss_conf 414----79999740------661465112111024
Q gi|254780438|r 143 NEH----SLQAAKLT------GADCIELYTGPYGAC 168 (261)
Q Consensus 143 ~q~----~i~~a~~~------Gad~VElhTG~Ya~a 168 (261)
+.. ..+..... ..|.+-+|.-|+.+.
T Consensus 185 ~~~~~~~~~d~~~~~g~~~~~~~D~ig~s~Yp~w~~ 220 (334)
T 1fob_A 185 SWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSA 220 (334)
T ss_dssp CHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCT
T ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCC
T ss_conf 701234789999862444577442783332788887
No 110
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=47.49 E-value=15 Score=16.88 Aligned_cols=188 Identities=13% Similarity=0.071 Sum_probs=116.4
Q ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEE
Q ss_conf 78868998999999997499899982478833488899999887400013674158883485689999985072128971
Q gi|254780438|r 19 RNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLV 98 (261)
Q Consensus 19 Rg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLV 98 (261)
|+.+.-+....++.+.+.|..-|-+-+|... .. ..|+.+...+.++.-+-.---.+.+.++.+.+..-+++-
T Consensus 17 r~~~~~~a~~~~~al~~~Gi~~iEitl~~p~----a~--~~I~~l~~~~~~~~~vGaGTV~~~~~~~~a~~aGa~fiv-- 88 (205)
T 1wa3_A 17 RANSVEEAKEKALAVFEGGVHLIEITFTVPD----AD--TVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFIV-- 88 (205)
T ss_dssp CCSSHHHHHHHHHHHHHTTCCEEEEETTSTT----HH--HHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEEE--
T ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEECCCCC----HH--HHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEE--
T ss_conf 7989999999999999879988999689976----89--999999973189828963000127889999864874886--
Q ss_pred ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 01655533357822133378899999862026963899725444414799997406614651121110244435643366
Q gi|254780438|r 99 PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIF 178 (261)
Q Consensus 99 Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~e 178 (261)
.=|++ ..+++..++.++.+--=+- .|++ +..|.+.|+|.|-++-.. ++ .+ ..
T Consensus 89 ---------sP~~~--------~~v~~~~~~~~~~~iPGv~-TptE--i~~A~~~G~~~vK~FPa~---~~-G~----~~ 140 (205)
T 1wa3_A 89 ---------SPHLD--------EEISQFCKEKGVFYMPGVM-TPTE--LVKAMKLGHTILKLFPGE---VV-GP----QF 140 (205)
T ss_dssp ---------CSSCC--------HHHHHHHHHHTCEEECEEC-SHHH--HHHHHHTTCCEEEETTHH---HH-HH----HH
T ss_pred ---------CCCCC--------HHHHHHHHHCCCCCCCCCC-CCHH--HHHHHHCCCCEEEECCHH---HC-CH----HH
T ss_conf ---------79999--------9999999983998227748-7158--999997699979745121---04-78----89
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 688999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 179 LNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 179 l~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
++.++. ---.+.+-+==|.|.+|+..+++. + ..-|.+|-+|+. .-+..+.+-.+++.+.++..|
T Consensus 141 lk~l~~-----p~p~i~~iptGGV~~~n~~~~l~a-G-a~avg~Gs~l~~-~~~~~i~~~a~~~~~~v~~~r 204 (205)
T 1wa3_A 141 VKAMKG-----PFPNVKFVPTGGVNLDNVCEWFKA-G-VLAVGVGSALVK-GTPDEVREKAKAFVEKIRGCT 204 (205)
T ss_dssp HHHHHT-----TCTTCEEEEBSSCCTTTHHHHHHH-T-CSCEEECHHHHC-SCHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHC-----CCCCCCEEEECCCCHHHHHHHHHC-C-CEEEEECHHHCC-CCHHHHHHHHHHHHHHHHHHC
T ss_conf 999866-----589984886469988999999988-9-929998367158-999999999999999999840
No 111
>3pfm_A Ggdef domain protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics, EAL domain; 2.91A {Pseudomonas fluorescens}
Probab=47.41 E-value=15 Score=16.87 Aligned_cols=160 Identities=18% Similarity=0.148 Sum_probs=86.1
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC--CCC-CCEEEEEECC--CHHHHHHH----H--HHCCCE
Q ss_conf 89999999974998999824788334888999998874000--136-7415888348--56899999----8--507212
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDE--QFP-KAELNIEGYP--NETFLNLC----E--RYKPEQ 94 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~--~~~-~~elNiEg~p--~~e~i~ia----~--~ikP~q 94 (261)
+-++-..++++|- +..-|...+.+.+.. .++ .+-+|+...- .++|+... . ...|..
T Consensus 56 ~~~f~~~ae~~~l-------------~~~l~~~~l~~~~~~l~~~~~~l~inls~~~l~~~~~~~~l~~~l~~~~~~~~~ 122 (243)
T 3pfm_A 56 AGRFLPWLERFGW-------------TSRLDLLMLEQVLRQMASHEDCLALNLSAATLADPHALNRVFEILRQHSDLGPR 122 (243)
T ss_dssp HHHHHHHHHHHTC-------------HHHHHHHHHHHHHHHGGGCCCCEEEEECHHHHHCHHHHHHHHHHHHHTGGGTTT
T ss_pred HHHHHHHHHHCCC-------------HHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCHHHHHHHHHHHHCCCCHHH
T ss_conf 9999999987693-------------889999998778998763052332026888975913446899999870487776
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE-EECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHH
Q ss_conf 897101655533357822133378899999862026963899-7254444147999974066146511211102444356
Q gi|254780438|r 95 ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISL-FADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQ 173 (261)
Q Consensus 95 vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSL-FIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~ 173 (261)
.++..+... + . +.......+..|++.|+++++ -...+. ..+.....+++|.|-|.-.-. .......
T Consensus 123 l~~~i~~~~-~--------~-~~~~~~~~l~~l~~~G~~i~idd~g~~~--~~~~~l~~l~~~~vKld~~~~-~~~~~~~ 189 (243)
T 3pfm_A 123 LTLEIGEEQ-L--------P-EQAMLEQLTRRLRELGFSLSLQRFGGRF--SMIGNLARLGLAYLKIDGSYI-RDIDQES 189 (243)
T ss_dssp EEEEEESSS-C--------C-CHHHHHHHHHHHHHHTCEEEEEEETTTG--GGGGGHHHHTCSEEEECGGGG-TTTTTCT
T ss_pred HHHHHHHHH-H--------H-CCHHHHHHHHHHHHHCCCEEEECCCCCC--CCHHHHHCCCHHHHCCCHHHH-HCCCCCH
T ss_conf 426666555-4--------1-0167899999999728966871269985--435554224401310439998-4533125
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 433666889998766541562352078989877999997369
Q gi|254780438|r 174 QERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIP 215 (261)
Q Consensus 174 ~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip 215 (261)
.... -++....+|+++|+.|=|-.==+-+-+.. +..++
T Consensus 190 ~~~~---~v~~i~~~a~~~~i~via~gVe~~~~~~~-l~~~g 227 (243)
T 3pfm_A 190 DKRL---FIEAIQRAAHSIDLPLIAERVETEGELQV-IREMG 227 (243)
T ss_dssp HHHH---HHHHHHHHHHHTTCCEEECCCCSHHHHHH-HHHHT
T ss_pred HHHH---HHHHHHHHHHHCCCEEEEEECCCHHHHHH-HHHCC
T ss_conf 6789---99999999998599899981884999999-99859
No 112
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05913, PSI-2, protein structure initiative; 2.15A {Enterococcus faecalis V583}
Probab=47.17 E-value=15 Score=16.93 Aligned_cols=104 Identities=18% Similarity=0.304 Sum_probs=55.7
Q ss_pred HHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC---HHHHHHHHHHCCCEEEE------EECCCCC
Q ss_conf 97499899982478833488899999887400013674158883485---68999998507212897------1016555
Q gi|254780438|r 34 LQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN---ETFLNLCERYKPEQITL------VPDDPHQ 104 (261)
Q Consensus 34 ~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~---~e~i~ia~~ikP~qvtL------VPe~r~e 104 (261)
.+.|++|| |=|- ....+.+..+.. .+.||.|++ .++++-..+..|+.-.| -|-
T Consensus 89 ~~lGi~gl----RLD~-Gf~~~eia~ls~---------~~~I~lNaSt~t~~~l~~l~~~~~n~~~l~acHNFYP~---- 150 (372)
T 2p0o_A 89 IELGVTGL----RMDY-GITIEQMAHASH---------KIDIGLNASTITLEEVAELKAHQADFSRLEAWHNYYPR---- 150 (372)
T ss_dssp HHHTCCEE----EECS-SCCHHHHHHHHT---------TSEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCCCCS----
T ss_pred HHCCCCEE----EECC-CCCHHHHHHCCC---------CCEEEEECCCCCHHHHHHHHHCCCCHHHEEEEECCCCC----
T ss_conf 98699899----9889-999999971866---------98899978869999999999829986787998566899----
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCC
Q ss_conf 333578221333788999998620269638997254444147999974066146511211
Q gi|254780438|r 105 LTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 105 lTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~ 164 (261)
.+-||+. +++.+.-+.|++.||++.-||--+-. ...-.--|-..+|-|-+-
T Consensus 151 --~~TGLs~----~~f~~~n~~~k~~gi~t~AFV~g~~~---~rGPl~eGLPTLE~HR~~ 201 (372)
T 2p0o_A 151 --PETGIGT----TFFNEKNRWLKELGLQVFTFVPGDGQ---TRGPIFAGLPTLEKHRGQ 201 (372)
T ss_dssp --TTCSBCH----HHHHHHHHHHHHTTCEEEEEECCSSS---CCTTTCSCCCSBGGGTTS
T ss_pred --CCCCCCH----HHHHHHHHHHHHCCCCEEEEEECCCC---CCCCCCCCCCCCHHHCCC
T ss_conf --8878799----99999999999779968999747998---889808998865887699
No 113
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=46.07 E-value=16 Score=16.73 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=48.2
Q ss_pred CEEEEEECC---CHHHHHHHH---------HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 415888348---568999998---------50721289710165553335782213337889999986202696389972
Q gi|254780438|r 71 AELNIEGYP---NETFLNLCE---------RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 71 ~elNiEg~p---~~e~i~ia~---------~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFI 138 (261)
.++-+.++. .+.++.++. .+.|.||++||-.... +.+ ..-.+.-.++.+.|+++|+||-+=-
T Consensus 305 ~p~~~~~~~~g~~~R~ia~liE~~g~~lP~~LAP~QV~ViPi~~~~-----~~~-~~~~e~a~~I~~~L~~~girV~~Dd 378 (471)
T 3a32_A 305 EVYIIHRALLGSIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGG-----EVD-REIEDLASSIAKGLLDKGFRVAVKG 378 (471)
T ss_dssp CEEEEEEEEEEEHHHHHHHHHHHTTTCCCGGGCSCSEEEEEEECSS-----TTH-HHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCC-----CCH-HHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 4088851456626777767898708988864377328999704764-----205-9999999999999997899899988
Q ss_pred CCCCC-CHHHHHHHHCCCC
Q ss_conf 54444-1479999740661
Q gi|254780438|r 139 DGNGN-EHSLQAAKLTGAD 156 (261)
Q Consensus 139 Dpd~~-q~~i~~a~~~Gad 156 (261)
..+.. -+-+..|..+|..
T Consensus 379 r~~~~iG~Kir~a~~~g~P 397 (471)
T 3a32_A 379 SSKTGLSSDVRHIESTAKP 397 (471)
T ss_dssp EETTTHHHHHHHHHHTTCC
T ss_pred CCCCCCCHHHHHHHHCCCC
T ss_conf 9998646899999857998
No 114
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, hydrolase; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=45.47 E-value=16 Score=16.67 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=10.2
Q ss_pred HHHHHHHHHHCCCCCEEEEEE
Q ss_conf 889999986202696389972
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFI 138 (261)
+.|+..|+.+|+.||+|=|=+
T Consensus 316 ~efk~LV~~~H~~GI~VIlDv 336 (718)
T 2e8y_A 316 TELKQMINTLHQHGLRVILDV 336 (718)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEE
T ss_conf 999999999987799899877
No 115
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA; 2.00A {Aquifex aeolicus VF5}
Probab=45.02 E-value=16 Score=16.62 Aligned_cols=215 Identities=16% Similarity=0.189 Sum_probs=127.2
Q ss_pred HHHHHHHHCCCC--------CCCCH---HHHHHHHHHCCCCEEEEE-----CCCCCCCCCHHHHHHHHH-----------
Q ss_conf 443223220788--------68998---999999997499899982-----478833488899999887-----------
Q gi|254780438|r 10 NAVAVLRNRRNL--------PWPNL---VHIGKIALQSGASGLTVH-----PRPDQRHIRYTDLPEIRR----------- 62 (261)
Q Consensus 10 dhiAtLRnaRg~--------~~P~~---~~~a~~~~~~GadgITvH-----~R~DrRHI~~~Dv~~l~~----------- 62 (261)
++++.+|+.+.. .|||+ .+++..+.++|||-|-+- |--|--+||..-...|+.
T Consensus 6 ~~f~~~k~~~~~~li~y~t~G~P~~~~~~~~~~~l~~~G~d~iElGiPfSDP~aDGpvIq~a~~~al~~G~~~~~~~~~~ 85 (262)
T 2ekc_A 6 DKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELS 85 (262)
T ss_dssp HHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 99999997599569988828379868999999999976999999789999865448999999999997899777766543
Q ss_pred -HHCCCCCCCEEEEEECCC-------HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf -400013674158883485-------689999985072128971016555333578221333788999998620269638
Q gi|254780438|r 63 -LIDEQFPKAELNIEGYPN-------ETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRI 134 (261)
Q Consensus 63 -~~~~~~~~~elNiEg~p~-------~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girv 134 (261)
-+...++++++=+=+|-+ ++|+.-+.+.-= .--|+||-|-|. -..+...+++.|+..
T Consensus 86 ~~~r~~~~~~pivlm~Y~N~i~~~G~~~f~~~~~~~Gv-~gviipDlp~ee--------------~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 86 ETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGI-DGFIVPDLPPEE--------------AEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTC-CEEECTTCCHHH--------------HHHHHHHHHHTTCEE
T ss_pred HHHHCCCCCCCEEEEECCCHHHHCCHHHHHHHHHHCCC-CEEECCCCCHHH--------------HHHHHHHHHCCCEEE
T ss_conf 33102378878899950434400678999999997697-578615886676--------------677776752055446
Q ss_pred EEEECCCCCCHHHHHHHHCCCCEEEE-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
Q ss_conf 99725444414799997406614651-----1211102444356433666889998766541562352078989877999
Q gi|254780438|r 135 SLFADGNGNEHSLQAAKLTGADCIEL-----YTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPN 209 (261)
Q Consensus 135 SLFIDpd~~q~~i~~a~~~Gad~VEl-----hTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~ 209 (261)
-.|+-|..+.+-++...+.....|=+ .||.=... . ...++.+.+..+.. .++-|-+|-|..-..-..
T Consensus 151 I~lvsp~t~~~ri~~i~~~s~gfiY~vs~~GvTG~~~~~--~----~~~~~~~i~~ik~~--t~~Pv~vGFGI~~~e~v~ 222 (262)
T 2ekc_A 151 VPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKL--P----YERIKKKVEEYREL--CDKPVVVGFGVSKKEHAR 222 (262)
T ss_dssp CCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------------CHHHHHHHHHHHHH--CCSCEEEESSCCSHHHHH
T ss_pred EEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC--C----CHHHHHHHHHHHHC--CCCCEEEECCCCCHHHHH
T ss_conf 763588886888888875156426772135636756656--5----02578999998512--688758862659999999
Q ss_pred HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99736996388425999999999409999999999997410
Q gi|254780438|r 210 LINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 210 ~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
.++ ..-+=|=||-++|-.--..|+ +.+.+|.+-+++..
T Consensus 223 ~~~--~~ADgvVVGSaivk~i~~~~~-~~~~~~i~~lk~al 260 (262)
T 2ekc_A 223 EIG--SFADGVVVGSALVKLAGQKKI-EDLGNLVKELKEGL 260 (262)
T ss_dssp HHH--TTSSEEEECHHHHHHHHTTCH-HHHHHHHHHHHHTT
T ss_pred HHH--HCCCEEEECHHHHHHHHHCCH-HHHHHHHHHHHHHH
T ss_conf 998--219999987899999875679-99999999999986
No 116
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=44.47 E-value=10 Score=18.05 Aligned_cols=178 Identities=12% Similarity=0.097 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE-------------------CC-CH
Q ss_conf 68998999999997499899982478833488899999887400013674158883-------------------48-56
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG-------------------YP-NE 81 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg-------------------~p-~~ 81 (261)
+.....++++.+.++|||-|-+= =.| =+++..+..+.+.... .+++.-++. +- ++
T Consensus 18 d~e~s~~~i~~l~e~GaD~IEiG-fSD--piadg~~i~~~~~~~~--~~~p~i~~~~~~~~~~~~~d~~~~~~~m~y~N~ 92 (234)
T 2f6u_A 18 DRTNTDEIIKAVADSGTDAVMIS-GTQ--NVTYEKARTLIEKVSQ--YGLPIVVEPSDPSNVVYDVDYLFVPTVLNSADG 92 (234)
T ss_dssp TSCCCHHHHHHHHTTTCSEEEEC-CCT--TCCHHHHHHHHHHHTT--SCCCEEECCSSCCCCCCCSSEEEEEEETTBSBG
T ss_pred CCCCHHHHHHHHHHCCCCEEEEC-CCC--CCCCCHHHHHHHHHHC--CCCCEEEEECCHHHEECCCCCEEEEEECCCCCH
T ss_conf 99758999999997599999987-977--4445569999998411--599989874312230025674033585255781
Q ss_pred ----HHHHHHHHHCC--CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCC
Q ss_conf ----89999985072--128971016555333578221333788999998620269638997254444147999974066
Q gi|254780438|r 82 ----TFLNLCERYKP--EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGA 155 (261)
Q Consensus 82 ----e~i~ia~~ikP--~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Ga 155 (261)
+.-.++.+.+= -.-.++|+.+.|...|+.+-+.... .+. .+.. +-|....+.+......+.
T Consensus 93 ~~~~G~~~f~~~~~~~g~~g~i~~d~~~e~~~e~~~~~~~~~-~~~-~i~~-----------~~p~~~~~~i~~~a~~~~ 159 (234)
T 2f6u_A 93 DWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDS-AVA-RVTK-----------ALCNIDKELAASYALVGE 159 (234)
T ss_dssp GGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTS-HHH-HHTT-----------BCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC-CEE-EEEC-----------CCCCCCHHHHHHHHHHHC
T ss_conf 554227999999998189844651394344256798747589-832-6763-----------699897999999986405
Q ss_pred CEE--EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHHHH
Q ss_conf 146--51121110244435643366688999876654156235207898-987799999736996388425999999
Q gi|254780438|r 156 DCI--ELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFAAT 229 (261)
Q Consensus 156 d~V--ElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiIse 229 (261)
..+ -.+++.+....... ..+..+++. . -++-|-.|=|. +-+.+.. +.+. -+=|-||=+|+-+
T Consensus 160 ~~~g~~~~~~~~g~~~~~~----~~~~~~~k~---~--~~~Pv~VGFGIss~e~a~~-i~~~--ADgvIVGSaive~ 224 (234)
T 2f6u_A 160 KLFNLPIIYIEYSGTYGNP----ELVAEVKKV---L--DKARLFYGGGIDSREKARE-MLRY--ADTIIVGNVIYEK 224 (234)
T ss_dssp HTTCCSEEEEECTTSCCCH----HHHHHHHHH---C--SSSEEEEESCCCSHHHHHH-HHHH--SSEEEECHHHHHH
T ss_pred CEEEEEEEEEECCCCCCCH----HHHHHHHHH---C--CCCCEEEECCCCCHHHHHH-HHHH--CCEEEECHHHHCC
T ss_conf 2358999998125566650----679999972---5--7983999899599999999-9961--9989999599616
No 117
>1vli_A Spore coat polysaccharide biosynthesis protein SPSE; 2636322, structural genomics, JCSG, protein structure initiative, BSU37870, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=44.31 E-value=17 Score=16.55 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=24.9
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECC
Q ss_conf 32232207886899899999999749989998247
Q gi|254780438|r 12 VAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPR 46 (261)
Q Consensus 12 iAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R 46 (261)
||=+-+.-.|+.--..+....|.++|||.|..-.|
T Consensus 32 IAEIG~NH~Gd~~~ak~lI~~A~~sGaDaVKFQ~~ 66 (385)
T 1vli_A 32 IAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMF 66 (385)
T ss_dssp EEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCB
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 99815776880999999999999819599995050
No 118
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=44.17 E-value=17 Score=16.54 Aligned_cols=53 Identities=17% Similarity=0.175 Sum_probs=29.2
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------------HHHHHHHHCCCCEE
Q ss_conf 289710165553335782213337889999986202696389972544441---------------47999974066146
Q gi|254780438|r 94 QITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE---------------HSLQAAKLTGADCI 158 (261)
Q Consensus 94 qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q---------------~~i~~a~~~Gad~V 158 (261)
.+.||| |=|+|- .+|...++...+ ....+-||+|+.| .| .+++.+++.|+|.|
T Consensus 18 ~ig~VP-------TMGaLH-~GHlsLi~~A~~--~~d~vvVSIFVNP--~QF~~~eD~~~YPr~l~~D~~ll~~~gvD~v 85 (276)
T 1v8f_A 18 GVGFVP-------TMGYLH-RGHLALVERARR--ENPFVVVSVFVNP--LQFGPGEDYHRYPRDLERDRALLQEAGVDLL 85 (276)
T ss_dssp CEEEEE-------ECSSCC-HHHHHHHHHHHH--HCSEEEEEECCCG--GGCCTTSSTTTSCCCHHHHHHHHHHTTCSEE
T ss_pred CEEEEC-------CCCCHH-HHHHHHHHHHHH--HCCCEEEEEEECC--CCCCCCHHHHHCCCCCHHHHHHHHHCCCCEE
T ss_conf 899986-------865175-999999999997--6897899997777--6689842476589982765999985899799
No 119
>1b1y_A Protein (beta-amylase); hydrolase(O-glycosyl); HET: GLC BGC; 2.50A {Hordeum vulgare} SCOP: c.1.8.1
Probab=44.14 E-value=17 Score=16.53 Aligned_cols=18 Identities=11% Similarity=0.182 Sum_probs=7.3
Q ss_pred HHHHHHHCCCEEEECCCC
Q ss_conf 876654156235207898
Q gi|254780438|r 185 TAQLAQKMDLQINAGHDL 202 (261)
Q Consensus 185 aa~~A~~lgL~VnAGHgL 202 (261)
....|...|+.+..=--|
T Consensus 360 V~~aa~~~Gv~vaGENAL 377 (500)
T 1b1y_A 360 VLSAGWREGLNVSCENAL 377 (500)
T ss_dssp HHHHHHHTTCCEEECCSS
T ss_pred HHHHHHHHCCCEEEEECC
T ss_conf 999999829945513152
No 120
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=43.77 E-value=17 Score=16.50 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=22.0
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHHCCCCEEEE
Q ss_conf 88999998620269638997254444147999-97406614651
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNGNEHSLQA-AKLTGADCIEL 160 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~-a~~~Gad~VEl 160 (261)
..|..+++.+++.++++ +|.+|..+.+.++. ++++|+..+++
T Consensus 213 ~~l~~l~~~ik~~~v~~-if~e~~~~~~~~~~la~e~g~~~~~l 255 (284)
T 3cx3_A 213 RQLTEIQEFVKTYKVKT-IFTESNASSKVAETLVKSTGVGLKTL 255 (284)
T ss_dssp HHHHHHHHHHHHTTCCC-EEECSSSCCHHHHHHHSSSSCCEEEC
T ss_pred HHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 89999999998559978-99818999199999999719986885
No 121
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 2abb_A* 1vys_X* 1vyp_X*
Probab=43.51 E-value=17 Score=16.47 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=28.8
Q ss_pred CEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 235207898987799999736996388425999999999
Q gi|254780438|r 194 LQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 194 L~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
.-|-+|-..+.+....+++. ...+=|.+|-++|+|-=+
T Consensus 295 ~~vi~~g~~t~~~ae~~l~~-G~aDlV~~gR~liadPd~ 332 (364)
T 1vyr_A 295 GVIIGAGAYTAEKAEDLIGK-GLIDAVAFGRDYIANPDL 332 (364)
T ss_dssp SEEEEESSCCHHHHHHHHHT-TSCSEEEESHHHHHCTTH
T ss_pred CEEEECCCCCHHHHHHHHHC-CCCCEEHHHHHHHHCCHH
T ss_conf 61996689999999999987-997456553898869499
No 122
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.65A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X*
Probab=43.29 E-value=17 Score=16.45 Aligned_cols=113 Identities=16% Similarity=0.151 Sum_probs=66.3
Q ss_pred CHHHHHHHHHHHCCCCCCCEEEEEECCCH------HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 88999998874000136741588834856------899999850721289710165553335782213337889999986
Q gi|254780438|r 53 RYTDLPEIRRLIDEQFPKAELNIEGYPNE------TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVAR 126 (261)
Q Consensus 53 ~~~Dv~~l~~~~~~~~~~~elNiEg~p~~------e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~ 126 (261)
.|+++.++-. + ++ -.=+=|+-.. ..+...++. .. .++|-.|.. ++=.|+.+-.+. ..
T Consensus 11 sd~~l~~~L~---~--~k-sIAVVGaS~~~~k~g~~v~~~L~~~-g~--~V~pVnP~~-~~i~G~~~y~sl-------~d 73 (144)
T 2d59_A 11 TDEDIREILT---R--YK-KIALVGASPKPERDANIVMKYLLEH-GY--DVYPVNPKY-EEVLGRKCYPSV-------LD 73 (144)
T ss_dssp CHHHHHHHHH---H--CC-EEEEETCCSCTTSHHHHHHHHHHHT-TC--EEEEECTTC-SEETTEECBSSG-------GG
T ss_pred CHHHHHHHHH---C--CC-EEEEECCCCCCCCCHHHHHHHHHHC-CC--EEEEECCCC-EEECCEECCCCH-------HH
T ss_conf 9999999987---7--89-4999863699997299999999977-99--799989877-067786335601-------20
Q ss_pred HCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 202696389972544441479999740661465112111024443564336668899987665415623520
Q gi|254780438|r 127 LHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINA 198 (261)
Q Consensus 127 l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnA 198 (261)
+.+.=--+.+|+-|..-...++.+.+.|+.+|=+.+|-|+.. +.+.|.+.|+.+=.
T Consensus 74 i~~~vD~v~v~~p~~~v~~il~~~~~~g~k~v~~~~g~~~ee----------------~~~~a~~~gi~~v~ 129 (144)
T 2d59_A 74 IPDKIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYNTYNRE----------------ASKKADEAGLIIVA 129 (144)
T ss_dssp CSSCCSEEEECSCHHHHHHHHHHHHHHTCSEEEECTTCCCHH----------------HHHHHHHTTCEEEE
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCHH----------------HHHHHHHCCCEEEC
T ss_conf 378873799972888889999999975999999824644999----------------99999996995790
No 123
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=43.23 E-value=17 Score=16.44 Aligned_cols=81 Identities=12% Similarity=-0.039 Sum_probs=39.3
Q ss_pred HHHHHCCCCEEEECCCCCHHHHHH-HHH--HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHH
Q ss_conf 999740661465112111024443-564--33666889998766541562352078989877999997369963884259
Q gi|254780438|r 148 QAAKLTGADCIELYTGPYGACYNN-PQQ--ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGH 224 (261)
Q Consensus 148 ~~a~~~Gad~VElhTG~Ya~a~~~-~~~--~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGH 224 (261)
+.....|.|.+.+=.|.|...... ... ....+..+.+..+.+. ..-|-++-+.+-+.....++. ...+=|.+|-
T Consensus 273 ~~~~~~gid~l~vs~g~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~~~~~~a~~~l~~-G~~DlV~~gR 349 (402)
T 2hsa_B 273 QLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY--QGTFICSGGYTRELGIEAVAQ-GDADLVSYGR 349 (402)
T ss_dssp HHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC--SSCEEEESSCCHHHHHHHHHT-TSCSEEEESH
T ss_pred HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEECCCCHHHHHHHHHC-CCCEEHHHHH
T ss_conf 6520354104885256555555655665666202489999999854--898898489898999999985-9960724419
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780438|r 225 AFAATAL 231 (261)
Q Consensus 225 aiIseAl 231 (261)
++|+|-=
T Consensus 350 ~~iaDPd 356 (402)
T 2hsa_B 350 LFISNPD 356 (402)
T ss_dssp HHHHCTT
T ss_pred HHHHCCH
T ss_conf 9887922
No 124
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=43.00 E-value=18 Score=16.42 Aligned_cols=182 Identities=17% Similarity=0.152 Sum_probs=81.7
Q ss_pred HHHHHHCCCCEEE---------EECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE---ECCCH-HHHHHHH---HHCCC
Q ss_conf 9999974998999---------8247883348889999988740001367415888---34856-8999998---50721
Q gi|254780438|r 30 GKIALQSGASGLT---------VHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIE---GYPNE-TFLNLCE---RYKPE 93 (261)
Q Consensus 30 a~~~~~~GadgIT---------vH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiE---g~p~~-e~i~ia~---~ikP~ 93 (261)
|++++++|.+.+. ++=.||-=-++-+++...-+-+.. ..++|+..- |+... +....+. +.-=.
T Consensus 34 Ari~e~aGf~a~~~sg~~~~~s~lG~pD~~~~t~~e~~~~v~~I~~-~~~~PvivD~d~Gyg~~~~~~~~v~~~~~aGaa 112 (287)
T 3b8i_A 34 ARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGR-VARLPVIADADHGYGNALNVMRTVVELERAGIA 112 (287)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHT-TCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9999985999894758999997389998887878999999986640-478665852654444318999999999975776
Q ss_pred EEEEEECCCCCC-CCCCCCCHH---HHHHHHHHHHHHHCCCCCEEEEEECCCCC--CHH---HHHHHHCCCCEEEECCCC
Q ss_conf 289710165553-335782213---33788999998620269638997254444--147---999974066146511211
Q gi|254780438|r 94 QITLVPDDPHQL-TSDHGWDFL---QNQALLTKTVARLHNLGSRISLFADGNGN--EHS---LQAAKLTGADCIELYTGP 164 (261)
Q Consensus 94 qvtLVPe~r~el-TTegGldv~---~~~~~L~~~i~~l~~~girvSLFIDpd~~--q~~---i~~a~~~Gad~VElhTG~ 164 (261)
-+++= |..... ....|-++. ....+++..+......+..+---.|.... +.. ..+-.+.|||+|=++ |.
T Consensus 113 gi~iE-D~~~~k~~~~~~~~~~~~~~~~~ki~aa~~a~~~~~~~i~aRtda~~~g~deAI~Ra~ay~eAGAD~ifi~-~~ 190 (287)
T 3b8i_A 113 ALTIE-DTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLV-GV 190 (287)
T ss_dssp EEEEE-CBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEE-CC
T ss_pred EEEEE-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEC-CC
T ss_conf 67864-36775556655655558999977788888730342111110443332699999999999986399889732-77
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH
Q ss_conf 10244435643366688999876654156235207898987799999736996388425999999
Q gi|254780438|r 165 YGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAAT 229 (261)
Q Consensus 165 Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIse 229 (261)
- +. .+++++.+.. ..-+.|..+..-.+-+...| .++. +.=++.|++..--
T Consensus 191 ~-----~~----e~i~~i~~~v----~~Pl~v~~~g~~~~~~~~eL-~~lG-v~~v~~g~~~~~a 240 (287)
T 3b8i_A 191 R-----DF----AHLEAIAEHL----HIPLMLVTYGNPQLRDDARL-ARLG-VRVVVNGHAAYFA 240 (287)
T ss_dssp C-----SH----HHHHHHHTTC----CSCEEEECTTCGGGCCHHHH-HHTT-EEEEECCCHHHHH
T ss_pred C-----CH----HHHHHHHHHC----CCCEEEECCCCCCCCCHHHH-HHCC-CEEEEECHHHHHH
T ss_conf 9-----99----9999999866----99989946899999999999-9779-8499985499999
No 125
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=42.79 E-value=18 Score=16.40 Aligned_cols=35 Identities=9% Similarity=0.023 Sum_probs=21.4
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 22322078868998999999997499899982478
Q gi|254780438|r 13 AVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRP 47 (261)
Q Consensus 13 AtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~ 47 (261)
|=+-+.-.|+.=-..+....|.++|||.|....|.
T Consensus 24 AEIg~NH~Gdl~~a~~LI~~A~~sGadaVKFQ~~~ 58 (349)
T 2wqp_A 24 CEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHI 58 (349)
T ss_dssp EEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 97067757769999999999998399999901737
No 126
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=41.86 E-value=18 Score=16.30 Aligned_cols=55 Identities=13% Similarity=0.183 Sum_probs=35.4
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCC
Q ss_conf 0721289710165553335782213337889999986202696389972544441479999740661
Q gi|254780438|r 90 YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGAD 156 (261)
Q Consensus 90 ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad 156 (261)
+.|.||.++|-..+ .......+.+.|+++|++|.+-.....-.+.+..|..+|+.
T Consensus 296 iap~~v~i~~~~~~------------~~~~~~~~~~~L~~~gi~v~~D~~~~~~g~k~~~a~~~g~p 350 (401)
T 1evl_A 296 LAPVQVVIMNITDS------------QSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVP 350 (401)
T ss_dssp TCSSCEEEEESSGG------------GHHHHHHHHHHHHHTTCCEEEECCSSCHHHHHHHHHHTTCS
T ss_pred CCCCEEEECCCCCH------------HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 33100121101210------------67777789999997899899989998960999999866999
No 127
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A
Probab=41.26 E-value=19 Score=16.24 Aligned_cols=45 Identities=13% Similarity=0.081 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH-HHCCCCEEEEC
Q ss_conf 37889999986202696389972544441479999-74066146511
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA-KLTGADCIELY 161 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a-~~~Gad~VElh 161 (261)
....|..+++.+++.+|+ .+|.++..+.+.++.. +++|+..+++.
T Consensus 208 s~~~l~~~~~~ik~~~i~-~i~~e~~~~~~~~~~la~e~~v~~~~ld 253 (284)
T 2prs_A 208 GAQRLHEIRTQLVEQKAT-CVFAEPQFRPAVVESVARGTSVRMGTLD 253 (284)
T ss_dssp CHHHHHHHHHHHHHTTCC-EEEECTTSCSHHHHHHTTTSCCEEEECC
T ss_pred CHHHHHHHHHHHHCCCCC-EEEEECCCCHHHHHHHHHHHCCCEEEEC
T ss_conf 989999999987515984-8998589891999999998099779844
No 128
>1pq4_A Periplasmic binding protein component of AN ABC type zinc uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=40.92 E-value=19 Score=16.20 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=20.4
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHHCCCCEEEE
Q ss_conf 88999998620269638997254444147999-97406614651
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNGNEHSLQA-AKLTGADCIEL 160 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~-a~~~Gad~VEl 160 (261)
..|..+++.+++.++++ ||.++....+.++. ++++|+..+++
T Consensus 224 ~~l~~~~~~ik~~~i~~-if~e~~~~~~~~~~ia~~~g~~~~~l 266 (291)
T 1pq4_A 224 QELKQLIDTAKENNLTM-VFGETQFSTKSSEAIAAEIGAGVELL 266 (291)
T ss_dssp HHHHHHHHHHHTTTCCE-EEEETTSCCHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 99999999999749988-99728999199999999809987986
No 129
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=40.26 E-value=17 Score=16.47 Aligned_cols=63 Identities=10% Similarity=0.087 Sum_probs=31.5
Q ss_pred HHHHHHHHHHCCCEEEECCCCCH---HHHHHHHHHC-CC--------------CEEEEEHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987665415623520789898---7799999736-99--------------638842599999999940999999999
Q gi|254780438|r 182 LAITAQLAQKMDLQINAGHDLTI---QNIPNLINAI-PY--------------ISEISVGHAFAATALECGVKEAVFCFR 243 (261)
Q Consensus 182 i~~aa~~A~~lgL~VnAGHgLn~---~Nl~~~i~~I-p~--------------I~EvsIGHaiIseAl~~GL~~aI~~~~ 243 (261)
.......|.+.|+.++.=--|-. ..-..++.+. +. ..=+-.+-.+....-|.-+.+=|++|.
T Consensus 363 v~QV~~aa~~~Gv~vaGENAL~~~d~~~~~qi~~~~~~~~~~~~~~~~~~~~~FTylRm~~~lf~~~n~~~F~~FVr~M~ 442 (495)
T 1wdp_A 363 VQQVLSGGWREDIRVAGENALPRYDATAYNQIILNARPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMH 442 (495)
T ss_dssp HHHHHHHHHHTTCCEEEECSSCCCSHHHHHHHHHHHSTTCCCTTSSCSSCCSEEEESCCCHHHHSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHHHC
T ss_conf 99999999980995662316300373589999984501026667877565003577468867739000899999999866
Q ss_pred H
Q ss_conf 9
Q gi|254780438|r 244 R 244 (261)
Q Consensus 244 ~ 244 (261)
.
T Consensus 443 ~ 443 (495)
T 1wdp_A 443 A 443 (495)
T ss_dssp T
T ss_pred C
T ss_conf 7
No 130
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=40.06 E-value=16 Score=16.73 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=15.7
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 8899999862026963899725444
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNG 142 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~ 142 (261)
..+..+.+++++...-+...++..+
T Consensus 118 ~~~~~l~~ry~~~p~v~~~~~~NE~ 142 (645)
T 1kwg_A 118 RIVTLLAERYGGLEAVAGFQTDNEY 142 (645)
T ss_dssp HHHHHHHHHHTTCTTEEEEECSSST
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf 9999999985899718999803776
No 131
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=39.92 E-value=17 Score=16.49 Aligned_cols=10 Identities=30% Similarity=0.647 Sum_probs=4.9
Q ss_pred HCCCCEEEEE
Q ss_conf 7499899982
Q gi|254780438|r 35 QSGASGLTVH 44 (261)
Q Consensus 35 ~~GadgITvH 44 (261)
.+|+|||+|-
T Consensus 45 ~~GVdGVmvD 54 (498)
T 1fa2_A 45 AGGCDGVMVD 54 (498)
T ss_dssp HTTCCEEEEE
T ss_pred HCCCCEEEEE
T ss_conf 8599789995
No 132
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=39.67 E-value=19 Score=16.14 Aligned_cols=87 Identities=10% Similarity=0.007 Sum_probs=56.1
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHH
Q ss_conf 50721289710165553335782213337889999986202696389972544441479999740661465112111024
Q gi|254780438|r 89 RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGAC 168 (261)
Q Consensus 89 ~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a 168 (261)
.-.-.++..|+-++..-+=+ |.-+-.+ +..+.+.---+.+|+.|+.....++.+.+.|+.++=+..|.+.+
T Consensus 37 ~~~g~~~~~v~p~~~~~~i~-g~~~~~s-------l~dip~~vDlv~i~vp~~~v~~~v~e~~~~g~~~v~~q~G~~~~- 107 (140)
T 1iuk_A 37 REQGYRVLPVNPRFQGEELF-GEEAVAS-------LLDLKEPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSGIRHP- 107 (140)
T ss_dssp HHTTCEEEEECGGGTTSEET-TEECBSS-------GGGCCSCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTTCCCH-
T ss_pred HHCCCCEEEECCCCCCCEEC-CEEECCC-------HHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCH-
T ss_conf 97899338878777653556-8272065-------67648987389998088999999999996298989989896899-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 4435643366688999876654156235207
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKMDLQINAG 199 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~lgL~VnAG 199 (261)
++.+.|++.|+.|=-+
T Consensus 108 ---------------e~~~~a~~~Gi~vI~~ 123 (140)
T 1iuk_A 108 ---------------EFEKALKEAGIPVVAD 123 (140)
T ss_dssp ---------------HHHHHHHHTTCCEEES
T ss_pred ---------------HHHHHHHHCCCEEECC
T ss_conf ---------------9999999959979928
No 133
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=39.31 E-value=20 Score=16.04 Aligned_cols=28 Identities=21% Similarity=0.322 Sum_probs=21.6
Q ss_pred CCC---CCC-CHHHHHHHHHHCCCCEEEEECC
Q ss_conf 788---689-9899999999749989998247
Q gi|254780438|r 19 RNL---PWP-NLVHIGKIALQSGASGLTVHPR 46 (261)
Q Consensus 19 Rg~---~~P-~~~~~a~~~~~~GadgITvH~R 46 (261)
||+ .+| |-+.+-..|.++||++|=+-.|
T Consensus 38 RG~~~~~~pENTl~af~~A~~~G~~~iE~DV~ 69 (292)
T 3mz2_A 38 RGGRGKGYPENSMETFENTLSYTPATFEIDPR 69 (292)
T ss_dssp GGCCBTTBCTTCHHHHHHHHHHCCCEEEECEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEE
T ss_conf 99889999843799999999859899998779
No 134
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=38.85 E-value=18 Score=16.26 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=20.7
Q ss_pred HHHHHHHHHHCCCCEEEEEC------CCCCCCCCHHHHHHHHHHHCC
Q ss_conf 89999999974998999824------788334888999998874000
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHP------RPDQRHIRYTDLPEIRRLIDE 66 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~------R~DrRHI~~~Dv~~l~~~~~~ 66 (261)
+..-.+....+|++||+|-- ++--+--..+...++-+++..
T Consensus 31 ~~~~Lr~lK~aGVdgVmvdVWWGiVE~~~Pg~YdWs~Yd~l~elv~~ 77 (516)
T 1vem_A 31 FENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKN 77 (516)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999983998899933412001688983471899999999998
No 135
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis}
Probab=36.82 E-value=15 Score=16.94 Aligned_cols=72 Identities=19% Similarity=0.192 Sum_probs=40.3
Q ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHHHH----C
Q ss_conf 99998507212897101655533357822133378899999862026963899725------4444147999974----0
Q gi|254780438|r 84 LNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAAKL----T 153 (261)
Q Consensus 84 i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a~~----~ 153 (261)
..|+..+.|.-|++=|-- +.=...|+. -...|++++..+++.|+.| |.| |+..+...++..+ +
T Consensus 53 ~~iida~~~~v~~~K~~~--affe~~G~~---G~~~L~~~~~~~~~~g~~V--ilD~K~~DIgnTv~~~a~a~~~~~~~l 125 (284)
T 3l52_A 53 RTVVEALGEHVAVFKPQS--AFFERFGSR---GVAVLEKTVAEARAAGALV--VMDAKRGDIGSTMAAYAEAFLRKDSPL 125 (284)
T ss_dssp HHHHHHHTTTCSEEEEBH--HHHHTTHHH---HHHHHHHHHHHHHHTTCEE--EEEEEECCCHHHHHHHHHHHSSTTSTT
T ss_pred HHHHHHHCCCCEEEECCH--HHHHHCCHH---HHHHHHHHHHHHHHCCCEE--EEECCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 999997257334995609--999756998---9999999999865079859--985155784579999999997303445
Q ss_pred CCCEEEECC
Q ss_conf 661465112
Q gi|254780438|r 154 GADCIELYT 162 (261)
Q Consensus 154 Gad~VElhT 162 (261)
|+|.|-+|.
T Consensus 126 gaDavTvhp 134 (284)
T 3l52_A 126 FSDALTVSP 134 (284)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
T ss_conf 676799736
No 136
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae TIGR4} SCOP: c.108.1.3
Probab=36.68 E-value=22 Score=15.77 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=40.4
Q ss_pred CEEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 41588834856899999850721289710165553335782213337889999986202696389972544441479999
Q gi|254780438|r 71 AELNIEGYPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA 150 (261)
Q Consensus 71 ~elNiEg~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a 150 (261)
.++=+=-+....++++.....-... + ..-++++....-.-+...+..+++++. +.-++||+-.+ ..+++|
T Consensus 99 ~~~~v~sn~~~~~~~~l~~~~l~~~-f----d~i~~~~~~~~~KP~~~~~~~~~~~~~---~~~~l~VgDs~--~di~aA 168 (190)
T 2fi1_A 99 GRHFLVSHRNDQVLEILEKTSIAAY-F----TEVVTSSSGFKRKPNPESMLYLREKYQ---ISSGLVIGDRP--IDIEAG 168 (190)
T ss_dssp CEEEEECSSCTHHHHHHHHTTCGGG-E----EEEECGGGCCCCTTSCHHHHHHHHHTT---CSSEEEEESSH--HHHHHH
T ss_pred EEEEEECCCCCCCCCCHHCCCCCCC-C----CCEECCCCCCCCCCCHHHHHHHHHHCC---CCCEEEECCCH--HHHHHH
T ss_conf 1389953786432010001366433-3----523313335788987799999999769---99769990799--999999
Q ss_pred HHCCCCEEEECCCC
Q ss_conf 74066146511211
Q gi|254780438|r 151 KLTGADCIELYTGP 164 (261)
Q Consensus 151 ~~~Gad~VElhTG~ 164 (261)
++.|..+|-+.+|+
T Consensus 169 ~~~G~~~i~v~~~~ 182 (190)
T 2fi1_A 169 QAAGLDTHLFTSIV 182 (190)
T ss_dssp HHTTCEEEECSCHH
T ss_pred HHCCCEEEEECCCC
T ss_conf 98699799999988
No 137
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; IDP02274, hydrolase, lipopolysaccharide biosynthesis, magnesium, structural genomics; 1.95A {Yersinia pestis CO92}
Probab=36.48 E-value=11 Score=17.80 Aligned_cols=79 Identities=11% Similarity=0.044 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHH------H-HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 485689999985072128971016555333578221333------7-889999986202696389972544441479999
Q gi|254780438|r 78 YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQN------Q-ALLTKTVARLHNLGSRISLFADGNGNEHSLQAA 150 (261)
Q Consensus 78 ~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~------~-~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a 150 (261)
..++++++.+.++| .+|=|-.+-+| ||+.-+..+ + -+-.--++.|++.||+| .+|-.+.+...-..+
T Consensus 37 ~~~~~~~~k~~~IK----lli~DvDGVlT-DG~i~~~~~Gee~k~F~~~Dg~gI~~L~~~GI~v-~iISg~~s~~v~~ra 110 (211)
T 3ij5_A 37 PVADDVIQRAANIR----LLICDVDGVMS-DGLIYMGNQGEELKAFNVRDGYGIRCLITSDIDV-AIITGRRAKLLEDRA 110 (211)
T ss_dssp CEEHHHHHHHTTCS----EEEECCTTTTS-SSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEE-EEECSSCCHHHHHHH
T ss_pred CCCHHHHHHHHCCC----EEEECCEECCC-CCEEEECCCCCEEEEEECCHHHHHHHHHHCCCEE-EEECCCCCHHHHHHH
T ss_conf 45799999997899----99987842406-7849998999899999522759999999879879-997899857888987
Q ss_pred HHCCCCEEEECCCC
Q ss_conf 74066146511211
Q gi|254780438|r 151 KLTGADCIELYTGP 164 (261)
Q Consensus 151 ~~~Gad~VElhTG~ 164 (261)
+++|.+.+ |-|.
T Consensus 111 ~~Lgi~~i--~~g~ 122 (211)
T 3ij5_A 111 NTLGITHL--YQGQ 122 (211)
T ss_dssp HHHTCCEE--ECSC
T ss_pred HHCCCCEE--EECC
T ss_conf 64274257--6065
No 138
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=36.28 E-value=21 Score=15.85 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 37889999986202696389972544
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFADGN 141 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFIDpd 141 (261)
..+.|+..|+.+|+.||+|-+=+.++
T Consensus 68 t~~e~~~lv~~~H~~Gi~VilD~V~n 93 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIH 93 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 99999999999998799899950546
No 139
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=35.99 E-value=22 Score=15.69 Aligned_cols=190 Identities=15% Similarity=0.122 Sum_probs=125.6
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEE
Q ss_conf 07886899899999999749989998247883348889999988740001367415888348568999998507212897
Q gi|254780438|r 18 RRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITL 97 (261)
Q Consensus 18 aRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtL 97 (261)
-|+.+..+.+..+..+.++|..-|-+-+|-+ .=...|+.+ .++++++-+-.=--.+.+-.+.+.+..-+++-
T Consensus 23 lr~~~~~~~~~~~~al~~~Gi~~iEITl~t~------~a~~~i~~l-~~~~p~~~vGaGTVl~~~~~~~a~~aGA~Fiv- 94 (224)
T 1vhc_A 23 IALDNADDILPLADTLAKNGLSVAEITFRSE------AAADAIRLL-RANRPDFLIAAGTVLTAEQVVLAKSSGADFVV- 94 (224)
T ss_dssp ECCSSGGGHHHHHHHHHHTTCCEEEEETTST------THHHHHHHH-HHHCTTCEEEEESCCSHHHHHHHHHHTCSEEE-
T ss_pred EECCCHHHHHHHHHHHHHCCCCEEEEECCCC------HHHHHHHHH-HHHCCCEEEEEECCCCHHHHHHHHHHCCCEEE-
T ss_conf 9689999999999999987998899968980------399999999-98689918962020457999999983799897-
Q ss_pred EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 10165553335782213337889999986202696389972544441479999740661465112111024443564336
Q gi|254780438|r 98 VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERI 177 (261)
Q Consensus 98 VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~ 177 (261)
-=|+| .++++..++.++-+--=+- .|++ +..|.+.|++.|-|+-..-. ...+
T Consensus 95 ----------SP~~~--------~~v~~~a~~~~i~~iPG~~-TpsE--i~~A~~~G~~~vKlFPA~~~---gG~~---- 146 (224)
T 1vhc_A 95 ----------TPGLN--------PKIVKLCQDLNFPITPGVN-NPMA--IEIALEMGISAVKFFPAEAS---GGVK---- 146 (224)
T ss_dssp ----------CSSCC--------HHHHHHHHHTTCCEECEEC-SHHH--HHHHHHTTCCEEEETTTTTT---THHH----
T ss_pred ----------CCCCC--------HHHHHHHHHCCCCCCCCCC-CHHH--HHHHHHCCCCEEEECCCCCC---CCHH----
T ss_conf ----------27899--------9999999856998458858-8799--99999859996887652112---5899----
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Q ss_conf 66889998766541562352078989877999997369963884259999999-----99409999999999997410
Q gi|254780438|r 178 FLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATA-----LECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 178 el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseA-----l~~GL~~aI~~~~~ii~~~~ 250 (261)
.++.++ +---++.+-+==|.|.+|+..+++ .+.+ =+-+|-+++... -|..+++.++++.+++++..
T Consensus 147 ~lkal~-----~p~p~~~f~ptGGV~~~N~~~yl~-ag~v-~~~~Gs~l~~~~~i~~~d~~~i~~~a~~~~~~ike~~ 217 (224)
T 1vhc_A 147 MIKALL-----GPYAQLQIMPTGGIGLHNIRDYLA-IPNI-VACGGSWFVEKKLIQSNNWDEIGRLVREVIDIIKEGG 217 (224)
T ss_dssp HHHHHH-----TTTTTCEEEEBSSCCTTTHHHHHT-STTB-CCEEECGGGCHHHHHTTCHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHH-----CCCCCCEEEEECCCCHHHHHHHHH-CCCE-EEEECHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 998565-----345687188517989889999993-8998-9998825369777743899999999999999999756
No 140
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for structural genomics, JCSG; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A*
Probab=35.88 E-value=22 Score=15.68 Aligned_cols=16 Identities=38% Similarity=0.480 Sum_probs=6.3
Q ss_pred HHHHCCCC--EEEECCCC
Q ss_conf 99740661--46511211
Q gi|254780438|r 149 AAKLTGAD--CIELYTGP 164 (261)
Q Consensus 149 ~a~~~Gad--~VElhTG~ 164 (261)
+|...|+| .||.|.-|
T Consensus 298 AAvA~GaDGlfiE~Hp~P 315 (350)
T 1vr6_A 298 AAIAVGAHGIIVEVHPEP 315 (350)
T ss_dssp HHHHHTCSEEEEEBCSCG
T ss_pred HHHHHCCCEEEEEECCCC
T ss_conf 999829988999708880
No 141
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A*
Probab=35.75 E-value=22 Score=15.67 Aligned_cols=111 Identities=11% Similarity=0.073 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCEE--------------------EEEECCCCCCHHHHHHH-----HCCCCEEEECCCCC
Q ss_conf 221333788999998620269638--------------------99725444414799997-----40661465112111
Q gi|254780438|r 111 WDFLQNQALLTKTVARLHNLGSRI--------------------SLFADGNGNEHSLQAAK-----LTGADCIELYTGPY 165 (261)
Q Consensus 111 ldv~~~~~~L~~~i~~l~~~girv--------------------SLFIDpd~~q~~i~~a~-----~~Gad~VElhTG~Y 165 (261)
|.+..|-..-+++++..+..|+-| ++|-||+ + ..+..+ ++|+|+.-+=.|.-
T Consensus 135 l~~eeNi~~Tk~vv~~Ah~~gv~VEaElG~vgg~Ed~~~~~~~~~~~T~Pe--e-a~~Fv~~t~~d~tgvD~LAvaiGt~ 211 (349)
T 3elf_A 135 VPIDENLAIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSPE--D-FEKTIEALGAGEHGKYLLAATFGNV 211 (349)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC-------------CCCHH--H-HHHHHHHHTTSTTSCEEEEECSSCB
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCEECCEECCCCCCCCCCCHHHHCCCHH--H-HHHHHHHHCCCCCCCEEEEEECCCC
T ss_conf 989999999999997630367432032141136578755453243057999--9-9999998456667853688751565
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHH-------HCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 0244435--643366688999876654-------156235207898987799999736996388425999
Q gi|254780438|r 166 GACYNNP--QQERIFLNKLAITAQLAQ-------KMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 166 a~a~~~~--~~~~~el~~i~~aa~~A~-------~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
=-.|..+ +..-..+.++.+...... ...|-.|-|.|+.-+.+...++ -+|.-+||+-.+
T Consensus 212 HG~yk~~~~~l~~~ll~~i~~~i~~~~~ip~~~~~vpLVlHGgSGip~e~i~~ai~--~Gi~KiNi~T~l 279 (349)
T 3elf_A 212 HGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSEIEEALR--YGVVKMNVDTDT 279 (349)
T ss_dssp SSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHHHHHHHH--TTEEEEEECHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHH--CCCEEEEECHHH
T ss_conf 66657888867777889999998875089865677652513899998999999998--498189627689
No 142
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=35.64 E-value=23 Score=15.66 Aligned_cols=22 Identities=27% Similarity=0.215 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 7889999986202696389972
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFI 138 (261)
.+.++..|+.+|+.||+|=|=+
T Consensus 181 ~~dfk~lV~~~H~~Gi~VIlDv 202 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDF 202 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
T ss_conf 9999999999998799999961
No 143
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=35.60 E-value=23 Score=15.65 Aligned_cols=37 Identities=14% Similarity=0.022 Sum_probs=19.7
Q ss_pred EEEEEECCCCCCH-----HHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 3899725444414-----799997406614651121110244
Q gi|254780438|r 133 RISLFADGNGNEH-----SLQAAKLTGADCIELYTGPYGACY 169 (261)
Q Consensus 133 rvSLFIDpd~~q~-----~i~~a~~~Gad~VElhTG~Ya~a~ 169 (261)
..-.++||+.... ......+.=+.++|-|+...++.+
T Consensus 177 P~~~ilDp~l~~~~P~~~~a~~~~Dal~h~~E~~~s~~~~~~ 218 (371)
T 1o2d_A 177 PVYAFLDPRYTYSMSDELTLSTGVDALSHAVEGYLSRKSTPP 218 (371)
T ss_dssp CSEEEECGGGGGGCCHHHHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred CCEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 988998646643788650015166799999999861034600
No 144
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=35.08 E-value=23 Score=15.60 Aligned_cols=17 Identities=12% Similarity=0.325 Sum_probs=8.2
Q ss_pred HHHHHHHHHCCCCEEEE
Q ss_conf 99999999749989998
Q gi|254780438|r 27 VHIGKIALQSGASGLTV 43 (261)
Q Consensus 27 ~~~a~~~~~~GadgITv 43 (261)
...+.-..+.|+||+-+
T Consensus 177 ~~~~~~~~~~gvDGfR~ 193 (543)
T 2zic_A 177 YDMMNFWIDKGIGGFRM 193 (543)
T ss_dssp HHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHCCCCCEEE
T ss_conf 99987998739871331
No 145
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=34.59 E-value=23 Score=15.54 Aligned_cols=185 Identities=16% Similarity=0.131 Sum_probs=93.5
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCC-CHHHHHHHHHHHCCCCCCCEEEEEECCCHH----HHHHHHHHCC--
Q ss_conf 886899899999999749989998247883348-889999988740001367415888348568----9999985072--
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQRHI-RYTDLPEIRRLIDEQFPKAELNIEGYPNET----FLNLCERYKP-- 92 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI-~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e----~i~ia~~ikP-- 92 (261)
-+.|||+-....-.+.+|++=+||-+|-- .+ +..+-..+-+.++...-..--|-+|+-+.+ .-.++.+.-+
T Consensus 26 Tgky~s~~~~~~ai~aSgaeivTvAlRR~--~~~~~~~~~~l~d~l~~~~~~~LPNTAGc~tAeEAv~~A~lARE~~~~~ 103 (265)
T 1wv2_A 26 TGKYKDLDETRRAIEASGAEIVTVAVRRT--NIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGH 103 (265)
T ss_dssp CSCSSSHHHHHHHHHHSCCSEEEEEGGGC--CC-------------CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSC
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEEEC--CCCCCCCCHHHHHHHCCCCEEECCCHHHHCCHHHHHHHHHHHHHHCCCC
T ss_conf 38999999999999985998799997402--5667887124777636578388866688546999999999999864898
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHH
Q ss_conf 12897101655533357822133378899999862026963899725444414799997406614651121110244435
Q gi|254780438|r 93 EQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNP 172 (261)
Q Consensus 93 ~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~ 172 (261)
+|+-| |+-.|--.-.. +.-..-+..+.|-+.|..|=-++.+||.. -+...++|+..|=----|+. .+
T Consensus 104 ~~iKL------EVi~d~~~L~P-d~~etl~Aa~~Lvk~gF~VlpY~~dD~~~--ak~L~d~Gc~avMPlgsPIG----Sg 170 (265)
T 1wv2_A 104 NLVKL------EVLADQKTLFP-NVVETLKAAEQLVKDGFDVMVYTSDDPII--ARQLAEIGCIAVMPLAGLIG----SG 170 (265)
T ss_dssp CEEEE------CCBSCTTTCCB-CHHHHHHHHHHHHTTTCEEEEEECSCHHH--HHHHHHSCCSEEEECSSSTT----CC
T ss_pred CEEEE------EEECCCCCCCC-CHHHHHHHHHHHHHCCCEEEECCCCCHHH--HHHHHHCCCEEECCCCCCCC----CC
T ss_conf 56999------87469877897-78899999999997897796247846999--99987549637544832101----12
Q ss_pred HH--HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 64--3366688999876654156235207898987799999736996388425999
Q gi|254780438|r 173 QQ--ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 173 ~~--~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
+. ....|..+.+ . ...-+-|-||=|---+-- ... .+. .+-|=++-+|
T Consensus 171 ~Gi~n~~~l~~i~~---~-~~vpviVDAGIG~pSdAa-~aM-ElG-~DaVLvNTAI 219 (265)
T 1wv2_A 171 LGICNPYNLRIILE---E-AKVPVLVDAGVGTASDAA-IAM-ELG-CEAVLMNTAI 219 (265)
T ss_dssp CCCSCHHHHHHHHH---H-CSSCBEEESCCCSHHHHH-HHH-HHT-CSEEEESHHH
T ss_pred CCCCCHHHHHHHHH---C-CCCEEEEECCCCCHHHHH-HHH-HCC-CCEEEECHHH
T ss_conf 46367789999985---3-895299746889788999-999-714-8889853275
No 146
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=34.49 E-value=24 Score=15.53 Aligned_cols=72 Identities=15% Similarity=0.287 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHHHH
Q ss_conf 8568999998507212897101655533357822133378899999862026963899725------4444147999974
Q gi|254780438|r 79 PNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAAKL 152 (261)
Q Consensus 79 p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a~~ 152 (261)
-.++.++++.++.|.-|.+ +=|+++..... .++++.|++.+.. +|.| |+....+++.+.+
T Consensus 14 ~~~~al~l~~~l~~~i~~i----------Kig~~l~~~~G--~~~i~~l~~~~~~--If~D~K~~DIgnTv~~~~~~~~~ 79 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFV----------KVGMELFYQEG--PSIVKQLKERNCE--LFLDLKLHDIPTTVNKAMKRLAS 79 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEE----------EECHHHHHHHT--HHHHHHHHHTTCE--EEEEEEECSCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCCCCEE----------EECHHHHHHCC--HHHHHHHHHCCCE--EEEEEECCCCHHHHHHHHHHHHC
T ss_conf 9999999999828865099----------98899996349--8999999976982--99985114747899999874412
Q ss_pred CCCCEEEECCCC
Q ss_conf 066146511211
Q gi|254780438|r 153 TGADCIELYTGP 164 (261)
Q Consensus 153 ~Gad~VElhTG~ 164 (261)
.|+|.+=+|.-.
T Consensus 80 ~~ad~vtvh~~~ 91 (239)
T 1dbt_A 80 LGVDLVNVHAAG 91 (239)
T ss_dssp TTCSEEEEEGGG
T ss_pred CCCCEEEECCCC
T ss_conf 567689992777
No 147
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=34.43 E-value=18 Score=16.30 Aligned_cols=71 Identities=11% Similarity=0.052 Sum_probs=41.6
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHH-HHCCCCE
Q ss_conf 9998507212897101655533357822133378899999862026963899725------44441479999-7406614
Q gi|254780438|r 85 NLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAA-KLTGADC 157 (261)
Q Consensus 85 ~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a-~~~Gad~ 157 (261)
.++..++|..|+.=|-- +.=.-.|+. -...|.++++.+++.|+.| |.| |+..+...++. ..+|+|.
T Consensus 110 ~iIdat~~~v~~~Kp~l--affe~~G~~---G~~~L~~ii~~l~~~g~~V--flDlK~gDIpnTv~~ya~a~~~~l~aDa 182 (352)
T 2fds_A 110 YIINNTKEYALIYKMNF--AFYIPYGSV---GINALKNVFDYLNSMNIPT--MLDMKINDIGNTVKNYRKFIFEYLKSDS 182 (352)
T ss_dssp HHHHHHGGGCSEEEEEG--GGTGGGTHH---HHHHHHHHHHHHHHTTCCE--EEEEEECCCHHHHHHHHHHHHTTSCCSE
T ss_pred HHHHHHCCCCEEEECCH--HHHHHHCHH---HHHHHHHHHHHHHHCCCCE--EEEECCCCHHHHHHHHHHHHHHHCCCCE
T ss_conf 99998328426990619--999873888---9999999999998679948--9840105826899999997653079878
Q ss_pred EEECC
Q ss_conf 65112
Q gi|254780438|r 158 IELYT 162 (261)
Q Consensus 158 VElhT 162 (261)
|-+|.
T Consensus 183 vTVhp 187 (352)
T 2fds_A 183 CTINV 187 (352)
T ss_dssp EEECC
T ss_pred EEECC
T ss_conf 99843
No 148
>1jr5_A 10 kDa anti-sigma factor; all-alpha, helix-turn-helix, coiled-coil, transcription; NMR {Enterobacteria phage T4} SCOP: a.150.1.1 PDB: 1tkv_A 1tl6_A 1tlh_A
Probab=34.02 E-value=6.1 Score=19.60 Aligned_cols=46 Identities=13% Similarity=0.245 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCC------CEEEEEHHHHH
Q ss_conf 899987665415623520789898779999973699------63884259999
Q gi|254780438|r 181 KLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPY------ISEISVGHAFA 227 (261)
Q Consensus 181 ~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~------I~EvsIGHaiI 227 (261)
+=..-..+..++|+. |-|-.+|-.....+++.+|. |+|+|.||-=|
T Consensus 29 ~q~~FI~FLNElG~~-~~G~e~t~~sfrqm~~~Lt~~er~elieeFn~G~e~i 80 (90)
T 1jr5_A 29 NRANFIAFLNEIGVT-HEGRKLNQNSFRKIVSELTQEDKKTLIDEFNEGFEGV 80 (90)
T ss_dssp CHHHHHHHHHHHTCC-SSSSCCCSHHHHHHHHTCCHHHHHHHHTTSSSSSTTT
T ss_pred HHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 299999999983788-7764878876999998679988999999985010889
No 149
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=34.01 E-value=24 Score=15.48 Aligned_cols=39 Identities=13% Similarity=0.251 Sum_probs=15.2
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH-HHHCCCCE
Q ss_conf 88999998620269638997254444147999-97406614
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNGNEHSLQA-AKLTGADC 157 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~-a~~~Gad~ 157 (261)
..|..+++.+++.++++ +|++|..+.+.++. ++++|+..
T Consensus 240 ~~l~~l~~~ik~~~v~~-if~e~~~~~~~~~~la~e~~~~~ 279 (321)
T 1xvl_A 240 KQVQTVIEEVKTNNVPT-IFCESTVSDKGQKQVAQATGARF 279 (321)
T ss_dssp HHHHHHHHHHHTTTCSE-EEEETTSCSHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHCCCCE-EEECCCCCCHHHHHHHHHHCCCC
T ss_conf 99999999998649838-99728989499999999859971
No 150
>1iho_A Pantoate--beta-alanine ligase; rossman fold, dimer, APO, high, KSMKS, flexible domains, multidomain; 1.70A {Escherichia coli} SCOP: c.26.1.4 PDB: 3mue_A
Probab=33.96 E-value=17 Score=16.44 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=31.3
Q ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC--------------CCCCHHHHHHHHCCCCE
Q ss_conf 2128971016555333578221333788999998620269638997254--------------44414799997406614
Q gi|254780438|r 92 PEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG--------------NGNEHSLQAAKLTGADC 157 (261)
Q Consensus 92 P~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp--------------d~~q~~i~~a~~~Gad~ 157 (261)
-..+.||| |=|+|- .+|...++...+ ...-+-||+|+.| +.+ .+++.+++.|+|.
T Consensus 21 g~~IgfVP-------TMGaLH-~GHlsLi~~A~~--~~~~vvvSIFVNP~QF~~~eD~~~YPr~~e-~D~~ll~~~gvD~ 89 (283)
T 1iho_A 21 GKRVALVP-------TMGNLH-DGHMKLVDEAKA--RADVVVVSIFVNPMQFDRPEDLARYPRTLQ-EDCEKLNKRKVDL 89 (283)
T ss_dssp TCCEEEEE-------ECSCCC-HHHHHHHHHHHH--HCSEEEEEECCCGGGCSSHHHHHHSCCCHH-HHHHHHHHTTCSE
T ss_pred CCEEEEEC-------CCCHHH-HHHHHHHHHHHH--HCCCEEEEEECCCCCCCCHHHHHHCCCCHH-HHHHHHHHCCCCE
T ss_conf 99399984-------863076-999999999997--489389999537534787144322899868-8889998639838
Q ss_pred E
Q ss_conf 6
Q gi|254780438|r 158 I 158 (261)
Q Consensus 158 V 158 (261)
|
T Consensus 90 v 90 (283)
T 1iho_A 90 V 90 (283)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 151
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek KEY, C-terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=33.23 E-value=25 Score=15.40 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=7.6
Q ss_pred HHHHHHHHHHCCCCEE
Q ss_conf 8999999997499899
Q gi|254780438|r 26 LVHIGKIALQSGASGL 41 (261)
Q Consensus 26 ~~~~a~~~~~~GadgI 41 (261)
..++..--++.|+||+
T Consensus 124 ~~d~~~~~~~~giDGf 139 (424)
T 2dh2_A 124 VKDALEFWLQAGVDGF 139 (424)
T ss_dssp HHHHHHHHHHHTCCEE
T ss_pred HHHHHHHCCCCCCCCC
T ss_conf 1237665112688740
No 152
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, dahps, DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=33.01 E-value=25 Score=15.37 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=64.8
Q ss_pred HHHHHHHHHHCCCCEEE-EECCCC--------------CCCCCHHHHHHHHHHHCCCCCCCEEEEEECCC---HHHHHHH
Q ss_conf 89999999974998999-824788--------------33488899999887400013674158883485---6899999
Q gi|254780438|r 26 LVHIGKIALQSGASGLT-VHPRPD--------------QRHIRYTDLPEIRRLIDEQFPKAELNIEGYPN---ETFLNLC 87 (261)
Q Consensus 26 ~~~~a~~~~~~GadgIT-vH~R~D--------------rRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~---~e~i~ia 87 (261)
+--..++..++|.--+| ||-... -|-.+..|+.. ..-. .+.+.||.=..+ ++|+..+
T Consensus 76 l~~l~~ik~~~glpv~TdVh~~~q~e~~~~vvDilQIpAfl~rqtdLl~--aaa~---t~kpV~lKkgq~~s~~~~~~a~ 150 (262)
T 1zco_A 76 LRWMREAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLK--EVGK---VENPVLLKRGMGNTIQELLYSA 150 (262)
T ss_dssp HHHHHHHHHHHTCEEEEECCCGGGHHHHHHHCSEEEECGGGTTCHHHHH--HHTT---SSSCEEEECCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCEEEEECCHHHCHHHHHH--HHHH---CCCEEEEECCCCCCHHHHHHHH
T ss_conf 9999987765497279852847777887400305895725411069999--8872---4982897367777778999999
Q ss_pred HHHC---CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-------HHHHHHHHCCCC-
Q ss_conf 8507---21289710165553335782213337889999986202696389972544441-------479999740661-
Q gi|254780438|r 88 ERYK---PEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE-------HSLQAAKLTGAD- 156 (261)
Q Consensus 88 ~~ik---P~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q-------~~i~~a~~~Gad- 156 (261)
.+++ -.++-|- .|+-.|..+-.+..-+..-+ +.++.+.. .-+..||.-+- ..-.+|..+|+|
T Consensus 151 eki~~~Gn~~i~l~--eRG~~t~~~~~~~~~D~~~i-~~~k~~~~----~pvi~D~shs~G~r~~v~~la~aa~a~G~dG 223 (262)
T 1zco_A 151 EYIMAQGNENVILC--ERGIRTFETATRFTLDISAV-PVVKELSH----LPIIVDPSHPAGRRSLVIPLAKAAYAIGADG 223 (262)
T ss_dssp HHHHTTTCCCEEEE--ECCBCCSCCSSSSBCCTTHH-HHHHHHBS----SCEEECSSTTTCSGGGHHHHHHHHHHTTCSE
T ss_pred HHHHHCCCCEEEEE--ECCCCCCCCCCCCCCCHHHH-HHHHHCCC----CCEECCCCCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf 99985799789999--72644534443245412554-99986028----9721179876666767999999999829998
Q ss_pred -EEEECCCCCHHHHHHHH
Q ss_conf -46511211102444356
Q gi|254780438|r 157 -CIELYTGPYGACYNNPQ 173 (261)
Q Consensus 157 -~VElhTG~Ya~a~~~~~ 173 (261)
.||.|--|= +|..+..
T Consensus 224 lfiE~Hp~P~-~A~sD~~ 240 (262)
T 1zco_A 224 IMVEVHPEPE-KALSDSQ 240 (262)
T ss_dssp EEEEBCSSGG-GCSSCTT
T ss_pred EEEEECCCCC-CCCCCCC
T ss_conf 9998187802-1788741
No 153
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=32.77 E-value=17 Score=16.55 Aligned_cols=61 Identities=16% Similarity=0.134 Sum_probs=35.6
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---HHHHHHHHCCCCEEEECCCCC
Q ss_conf 165553335782213337889999986202696389972544441---479999740661465112111
Q gi|254780438|r 100 DDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE---HSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 100 e~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q---~~i~~a~~~Gad~VElhTG~Y 165 (261)
+|.=-||=|-|++- .....++..|++.|++..+|+-...-+ ..++...+-|. .|.-||-.-
T Consensus 42 ~k~V~LTFDDg~~~----~~~~~iL~~L~~~~i~aTfFv~g~~~~~~~~~~~~~~~~Gh-eIgnHt~~H 105 (240)
T 1ny1_A 42 EKTIYLTFDNGYEN----GYTPKVLDVLKKHRVTGTFFVTGHFVKDQPQLIKRMSDEGH-IIGNHSFHH 105 (240)
T ss_dssp SSEEEEEEEESSCC----SCHHHHHHHHHHTTCCCEEEECHHHHHHCHHHHHHHHHTTC-EEEECCSSC
T ss_pred CCEEEEEEECCCCC----CCHHHHHHHHHHCCCCEEEEEHHHHHHHCHHHHHHHHHCCC-EEEECCCCC
T ss_conf 98799988589984----42899999999859988998323445559899999985898-898435556
No 154
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei}
Probab=32.33 E-value=25 Score=15.30 Aligned_cols=39 Identities=13% Similarity=0.151 Sum_probs=25.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf 6235207898987799999736996388425999999999
Q gi|254780438|r 193 DLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALE 232 (261)
Q Consensus 193 gL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~ 232 (261)
+.-|-+|.+.+.+....+|++ ...+=|.+|-++++|--+
T Consensus 287 ~~pvi~~g~~t~e~ae~~l~~-G~aDlV~~gR~~iaDPdl 325 (361)
T 3gka_A 287 GGPFIVNENFTLDSAQAALDA-GQADAVAWGKLFIANPDL 325 (361)
T ss_dssp CSCEEEESSCCHHHHHHHHHT-TSCSEEEESHHHHHCTTH
T ss_pred CCCEEEECCCCHHHHHHHHHC-CCCCCHHHHHHHHHCCHH
T ss_conf 877899799999999999987-997562764999979239
No 155
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P*
Probab=32.19 E-value=26 Score=15.28 Aligned_cols=25 Identities=16% Similarity=0.018 Sum_probs=17.2
Q ss_pred EEECCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 52078989877999997369963884
Q gi|254780438|r 196 INAGHDLTIQNIPNLINAIPYISEIS 221 (261)
Q Consensus 196 VnAGHgLn~~Nl~~~i~~Ip~I~Evs 221 (261)
+-|| |||.+|+..+++.=|..-.||
T Consensus 403 ~LAG-GL~~dNV~~ai~~~p~gVDVS 427 (452)
T 1pii_A 403 LLAG-GLGADNCVEAAQTGCAGLDFN 427 (452)
T ss_dssp EEES-SCCTTTHHHHHTTCCSEEEEC
T ss_pred EEEC-CCCHHHHHHHHHCCCCEEEEC
T ss_conf 9987-899999999986699999905
No 156
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=32.15 E-value=26 Score=15.28 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=15.9
Q ss_pred HHHHHCCCCEEEEECCC-------CCCCCCHHHHHHHHHHHC
Q ss_conf 99997499899982478-------833488899999887400
Q gi|254780438|r 31 KIALQSGASGLTVHPRP-------DQRHIRYTDLPEIRRLID 65 (261)
Q Consensus 31 ~~~~~~GadgITvH~R~-------DrRHI~~~Dv~~l~~~~~ 65 (261)
....++|.+.+-+-..- +.-.+.+.-+..+.+++.
T Consensus 76 ~~ik~~Gfn~vRipv~w~~~~~~~~~~~~~~~~l~~~~~vv~ 117 (395)
T 2jep_A 76 KKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVD 117 (395)
T ss_dssp HHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 999983998699625699946788887459899999999999
No 157
>3guz_A Pantothenate synthetase; pantothenate biosynthesis, substrate binding, competitive inhibition, rossmann fold; HET: PAF; 1.67A {Escherichia coli}
Probab=31.51 E-value=26 Score=15.21 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=39.2
Q ss_pred HHHHHHHH--HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC-------------CCHH
Q ss_conf 89999985--07212897101655533357822133378899999862026963899725444-------------4147
Q gi|254780438|r 82 TFLNLCER--YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG-------------NEHS 146 (261)
Q Consensus 82 e~i~ia~~--ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~-------------~q~~ 146 (261)
++-+.+.. -.-..+.||| |=|+|- .++...++...+ ...-+-||+|+.|-- -+.+
T Consensus 9 ~lr~~~~~~r~~g~~IgfVP-------TMGaLH-~GHlsLI~~A~~--~~d~vvVSIFVNP~QF~~~eD~~~YPr~~~~D 78 (176)
T 3guz_A 9 LLRQQIRRLRMEGKRVALVP-------TMGNLH-DGHMKLVDEAKA--RADVVAVSIFVNPMQFDRPEDLARYPRTLQED 78 (176)
T ss_dssp HHHHHHHHHHHTTCCEEEEE-------ECSCCC-GGGHHHHHHHHH--TCSEEEEEECCCGGGCSCHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEC-------CCCCHH-HHHHHHHHHHHH--HCCEEEEEEECCCHHCCCCCCCCCCCCCHHHH
T ss_conf 99999999997499499983-------873065-999999999997--59938999603703246666665499980778
Q ss_pred HHHHHHCCCCEEE
Q ss_conf 9999740661465
Q gi|254780438|r 147 LQAAKLTGADCIE 159 (261)
Q Consensus 147 i~~a~~~Gad~VE 159 (261)
++.+.+.|+|.|=
T Consensus 79 ~~~l~~~gvd~vf 91 (176)
T 3guz_A 79 CEKLNKRKVDLVF 91 (176)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHCCCCEEE
T ss_conf 9999976998999
No 158
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=31.29 E-value=26 Score=15.19 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=40.5
Q ss_pred CHHHHHHHH---------HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 568999998---------50721289710165553335782213337889999986202696389972544441479999
Q gi|254780438|r 80 NETFLNLCE---------RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA 150 (261)
Q Consensus 80 ~~e~i~ia~---------~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a 150 (261)
.+.|+.+.. .+.|.||.++|-.. .++.++-.++...|+++|+||-+=--...-.+-+..|
T Consensus 524 ieR~ia~liE~~~g~lP~~LAP~QV~Iipi~~-----------e~~~e~A~~I~~~L~~~girV~~Ddr~~siG~Kir~a 592 (645)
T 1nyr_A 524 MERFVAFLTEETKGAFPTWLAPKQVQIIPVNV-----------DLHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREA 592 (645)
T ss_dssp HHHHHHHHHHHHTTCCCTTTCSSCEEEEESSH-----------HHHHHHHHHHHHHHHTTTCCEEECCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC-----------HHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
T ss_conf 99999997353188689872885189995485-----------4789999999999997899899989999976999999
Q ss_pred HHCCCC
Q ss_conf 740661
Q gi|254780438|r 151 KLTGAD 156 (261)
Q Consensus 151 ~~~Gad 156 (261)
..+|+.
T Consensus 593 ~~~giP 598 (645)
T 1nyr_A 593 QMQKIP 598 (645)
T ss_dssp HHHTCS
T ss_pred HHCCCC
T ss_conf 866998
No 159
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle; 2.00A {Geobacillus SP}
Probab=30.94 E-value=27 Score=15.15 Aligned_cols=31 Identities=6% Similarity=-0.046 Sum_probs=15.3
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 883348889999988740001367415888348
Q gi|254780438|r 47 PDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP 79 (261)
Q Consensus 47 ~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p 79 (261)
.|.|.=+.+|+..|.+.+.+. ++.+=+.+-+
T Consensus 71 vd~~~Gt~~dfk~lv~~aH~~--Gi~VilD~V~ 101 (555)
T 2ze0_A 71 IMDEFGTMDDFDELLAQAHRR--GLKVILDLVI 101 (555)
T ss_dssp ECGGGCCHHHHHHHHHHHHHT--TCEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHC--CCEEEEEECC
T ss_conf 471249999999999999988--9989999896
No 160
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=30.87 E-value=27 Score=15.14 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=40.3
Q ss_pred HHHHHHHHHH--CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCC-------------
Q ss_conf 6899999850--72128971016555333578221333788999998620269-6389972544441-------------
Q gi|254780438|r 81 ETFLNLCERY--KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLG-SRISLFADGNGNE------------- 144 (261)
Q Consensus 81 ~e~i~ia~~i--kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~g-irvSLFIDpd~~q------------- 144 (261)
.++-...... .-..+.||| |=|+|-- ++...++... +.++ +-||+||.| .|
T Consensus 29 ~elr~~~~~~r~~g~~IgfVP-------TMGaLH~-GHlsLI~~A~---~~~d~vvVSIFVNP--~QF~~~eD~~~YPr~ 95 (314)
T 3inn_A 29 EELRQALAPARQQGKKIGFVP-------TMGYLHK-GHLELVRRAR---VENDVTLVSIFVNP--LQFGANEDLGRYPRD 95 (314)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-------ECSSCCH-HHHHHHHHHH---HHCSEEEEEECCCG--GGSCTTSSTTTCCCC
T ss_pred HHHHHHHHHHHHCCCEEEEEC-------CCCCHHH-HHHHHHHHHH---HHCCEEEEEEEECC--CCCCCCCHHHHCCCC
T ss_conf 999999999997399599986-------8620769-9999999998---74994999997777--667887307458998
Q ss_pred --HHHHHHHHCCCCEEE
Q ss_conf --479999740661465
Q gi|254780438|r 145 --HSLQAAKLTGADCIE 159 (261)
Q Consensus 145 --~~i~~a~~~Gad~VE 159 (261)
.+++.+.+.|+|.|=
T Consensus 96 le~D~~~l~~~gvD~vF 112 (314)
T 3inn_A 96 LERDAGLLHDAQVDYLF 112 (314)
T ss_dssp HHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCEEE
T ss_conf 67858999866973998
No 161
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=30.71 E-value=27 Score=15.12 Aligned_cols=37 Identities=14% Similarity=-0.017 Sum_probs=18.1
Q ss_pred EEEEEECCCCCCH-----HHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 3899725444414-----799997406614651121110244
Q gi|254780438|r 133 RISLFADGNGNEH-----SLQAAKLTGADCIELYTGPYGACY 169 (261)
Q Consensus 133 rvSLFIDpd~~q~-----~i~~a~~~Gad~VElhTG~Ya~a~ 169 (261)
..-.++||+.... .....-+.-+.++|-|+...++.+
T Consensus 172 p~~~i~Dp~l~~~~P~~~~a~~~~Dal~h~~E~~~s~~~~~~ 213 (386)
T 1rrm_A 172 PQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWAL 213 (386)
T ss_dssp CSEEEECGGGTTTSCHHHHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred CCCCHHHHHHHCCCCHHEEECCHHHHHHHHHHHHHCCCCCCC
T ss_conf 210103787733896340531078777666443000223100
No 162
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=30.67 E-value=27 Score=15.12 Aligned_cols=57 Identities=23% Similarity=0.166 Sum_probs=29.1
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-HHHHHHHHH-------CCCEEEEEECCCCCCC
Q ss_conf 34888999998874000136741588834856-899999850-------7212897101655533
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-TFLNLCERY-------KPEQITLVPDDPHQLT 106 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e~i~ia~~i-------kP~qvtLVPe~r~elT 106 (261)
|.++.+|+..|.+++..-+...++.+-...++ .+.+..... -+...|+|=|..+++.
T Consensus 5 R~at~~D~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~va~~~~~i~ 69 (199)
T 1u6m_A 5 RSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVA 69 (199)
T ss_dssp EECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEE
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEE
T ss_conf 88969999999999999999733310256899999999999874812136554199999999899
No 163
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli}
Probab=29.93 E-value=27 Score=15.08 Aligned_cols=71 Identities=17% Similarity=0.257 Sum_probs=32.0
Q ss_pred CEEEEEECCCC--CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH--HHH---------HHHHCCCCEEE
Q ss_conf 12897101655--533357822133378899999862026963899725444414--799---------99740661465
Q gi|254780438|r 93 EQITLVPDDPH--QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEH--SLQ---------AAKLTGADCIE 159 (261)
Q Consensus 93 ~qvtLVPe~r~--elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~--~i~---------~a~~~Gad~VE 159 (261)
-.+.+.+|+.. =.=+|-|--. ..+.|...+..+-..+-+ -|++...... ..+ ++.=+=+|.|+
T Consensus 83 ~~I~i~~d~~~~~l~I~DnGiGM--t~~el~~~l~tia~S~~~--~f~~~~~~~~~~~~~~IGqFGIGf~S~FmVad~V~ 158 (235)
T 2ior_A 83 LRVRVSFDKDKRTLTISDNGVGM--TRDEVIDHLGTIAKSGTK--SFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVT 158 (235)
T ss_dssp CCEEEEEETTTTEEEEEECSSCC--CHHHHHHHHTTCCCTTHH--HHHHHCCSCHHHHHHHHTTCCCCGGGGGGTEEEEE
T ss_pred CEEEEEECCCCCEEEEEECCCCC--CHHHHHHHHHHHHHHHHH--HHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEE
T ss_conf 43688864899889999777332--478866665022023238--89875331133441100234500255533067699
Q ss_pred ECCCCCHH
Q ss_conf 11211102
Q gi|254780438|r 160 LYTGPYGA 167 (261)
Q Consensus 160 lhTG~Ya~ 167 (261)
++|-.+..
T Consensus 159 V~Trs~~~ 166 (235)
T 2ior_A 159 VRTRAAGE 166 (235)
T ss_dssp EEEECTTS
T ss_pred EEECCCCC
T ss_conf 98446686
No 164
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=29.65 E-value=19 Score=16.15 Aligned_cols=57 Identities=19% Similarity=0.161 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH-HHHHHHHHHHH------------HHHHHHCCCEEE
Q ss_conf 544441479999740661465112111024443564-33666889998------------766541562352
Q gi|254780438|r 139 DGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ-ERIFLNKLAIT------------AQLAQKMDLQIN 197 (261)
Q Consensus 139 Dpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~-~~~el~~i~~a------------a~~A~~lgL~Vn 197 (261)
|++..+...+.|+++|.+ +.++.|.|+-. ..+.. -..|...++.. +..|+++||.+-
T Consensus 167 ~~~lr~~~~~~a~~~g~~-~~~~~GvY~~~-~GP~fET~AEir~~r~~GaDvVGMS~vPEa~lAre~gl~~a 236 (284)
T 3fuc_A 167 DRDMRQKAHSTWKQMGEQ-RELQEGTYVML-GGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVF 236 (284)
T ss_dssp CHHHHHHHHHHHHHHTCS-SCCEEEEEEEC-CCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHCCCC-EECCCEEEEEC-CCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCEE
T ss_conf 199999999999984994-25065699965-58986779999999985999874785689999987799879
No 165
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, zinc, mRNA, aminoacylation, translational regulation, protein/RNA, ligase/RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=29.40 E-value=28 Score=14.97 Aligned_cols=67 Identities=13% Similarity=0.227 Sum_probs=43.4
Q ss_pred CHHHHHHHHH---------HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 5689999985---------0721289710165553335782213337889999986202696389972544441479999
Q gi|254780438|r 80 NETFLNLCER---------YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA 150 (261)
Q Consensus 80 ~~e~i~ia~~---------ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a 150 (261)
.+.|+.+..+ +.|.||.+||-.. +..+.-..+.+.|+++|+||.+=.-...-.+-+..|
T Consensus 518 ieR~ia~liE~~g~~~P~~lAP~qV~Iipi~~------------~~~e~A~~i~~~L~~~Girv~~Ddr~~~~g~Kir~a 585 (642)
T 1qf6_A 518 MERFIGILTEEFAGFFPTWLAPVQVVIMNITD------------SQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREH 585 (642)
T ss_dssp HHHHHHHHHHHHTTCCCTTTCSSCEEEEESSH------------HHHHHHHHHHHHHHTTTCCEEEECCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCH------------HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
T ss_conf 99999999986189589875873399997180------------389999999999997899899989999962899999
Q ss_pred HHCCCCEE
Q ss_conf 74066146
Q gi|254780438|r 151 KLTGADCI 158 (261)
Q Consensus 151 ~~~Gad~V 158 (261)
...|+..+
T Consensus 586 ~~~giPy~ 593 (642)
T 1qf6_A 586 TLRRVPYM 593 (642)
T ss_dssp HHTTCSEE
T ss_pred HHCCCCEE
T ss_conf 86699999
No 166
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=28.60 E-value=29 Score=14.88 Aligned_cols=132 Identities=12% Similarity=0.064 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE--EEEECCC----
Q ss_conf 2214432232207886899899999999749989998247883348889999988740001367415--8883485----
Q gi|254780438|r 7 VNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL--NIEGYPN---- 80 (261)
Q Consensus 7 VNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el--NiEg~p~---- 80 (261)
|=+||=-+.-. -...-|+-.....+..+|+|+|.+|+=- ++.+......+..+ .+.+...
T Consensus 30 vA~DHg~~~gp--~~gl~d~~~~v~~~~~~~~davl~~~G~------------~~~~~~~~~~~~~~i~~~~~~~~~~~~ 95 (273)
T 2qjg_A 30 VPMDHGVSNGP--IKGLIDIRKTVNDVAEGGANAVLLHKGI------------VRHGHRGYGKDVGLIIHLSGGTAISPN 95 (273)
T ss_dssp EECCHHHHHCS--CTTSSSHHHHHHHHHHHTCSEEEECHHH------------HHSCCCSSSCCCEEEEECEECCTTSSS
T ss_pred EECCCCCCCCC--CCCCCCHHHHHHHHHHCCCCEEEECHHH------------HHHHCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 97556743488--7552599999999984599899937577------------766130216887569994687656888
Q ss_pred H------HHHHHHHHHCCCEEEE-EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---------CCC-
Q ss_conf 6------8999998507212897-1016555333578221333788999998620269638997254---------444-
Q gi|254780438|r 81 E------TFLNLCERYKPEQITL-VPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG---------NGN- 143 (261)
Q Consensus 81 ~------e~i~ia~~ikP~qvtL-VPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp---------d~~- 143 (261)
+ --++-+...--+-|.+ |...+++ -......+..++..+++.|+.+-+-+-| |++
T Consensus 96 ~~~~~~~~sve~A~rlGAdaV~~~v~~g~~~--------e~~~l~~~a~i~~e~~~~glp~i~~~yp~g~~~~~~~d~~~ 167 (273)
T 2qjg_A 96 PLKKVIVTTVEEAIRMGADAVSIHVNVGSDE--------DWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPEL 167 (273)
T ss_dssp TTCCEECSCHHHHHHTTCSEEEEEEEETSTT--------HHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHH
T ss_pred CCCCEEECHHHHHHCCCCCEEEEEEECCCCC--------HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH
T ss_conf 6542220019997276854699998548960--------79999999999999997399369986236777667778899
Q ss_pred -CHHHHHHHHCCCCEEEE
Q ss_conf -14799997406614651
Q gi|254780438|r 144 -EHSLQAAKLTGADCIEL 160 (261)
Q Consensus 144 -q~~i~~a~~~Gad~VEl 160 (261)
...+..|.++|+|.+-.
T Consensus 168 i~~aaR~a~ELGADiiK~ 185 (273)
T 2qjg_A 168 VAHAARLGAELGADIVKT 185 (273)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
T ss_conf 999999999859988852
No 167
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 1.80A {Agrobacterium tumefaciens str}
Probab=28.57 E-value=29 Score=14.88 Aligned_cols=105 Identities=14% Similarity=0.065 Sum_probs=57.6
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH--HHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 348889999988740001367415888348568999998--507212897101655533357822133378899999862
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCE--RYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARL 127 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~--~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l 127 (261)
|-++++|+..|.++....++. +-+..+ ++..+... .-.|+..++|=+..+++---.++.+..+... .-
T Consensus 9 R~a~~~D~~~l~~l~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~ivG~~~~~~~~~~~~------~~ 78 (150)
T 2dxq_A 9 RAAGPGDLPGLLELYQVLNPS---DPELTT-QEAGAVFAAMLAQPGLTIFVATENGKPVATATLLIVPNLTR------AA 78 (150)
T ss_dssp EECCGGGHHHHHHHHHHHCTT---SCCCCH-HHHHHHHHHHHHSTTEEEEEEEETTEEEEEEEEEEECCSHH------HH
T ss_pred EECCHHHHHHHHHHHHHHHHC---CCCCCH-HHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEECCCCCC------CC
T ss_conf 969989999999999997114---777786-99999999998599939999999999999999961366555------78
Q ss_pred CCCCCEEEEEECCCCCC---------HHHHHHHHCCCCEEEECCCC
Q ss_conf 02696389972544441---------47999974066146511211
Q gi|254780438|r 128 HNLGSRISLFADGNGNE---------HSLQAAKLTGADCIELYTGP 164 (261)
Q Consensus 128 ~~~girvSLFIDpd~~q---------~~i~~a~~~Gad~VElhTG~ 164 (261)
...+.--.++|+|+-.. ..++.|++.|+..+.+.|.+
T Consensus 79 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 124 (150)
T 2dxq_A 79 RPYAFIENVVTLEARRGRGYGRTVVRHAIETAFGANCYKVMLLTGR 124 (150)
T ss_dssp CCEEEEEEEECCGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred CCEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 7679997502107550899899999999999998799899999838
No 168
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate esterase; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=28.40 E-value=29 Score=14.86 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=31.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC----------CCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 5333578221333788999998620269638997254----------44414799997406614651121110
Q gi|254780438|r 104 QLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG----------NGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 104 elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp----------d~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
-||=|.|..- ....++..|++.|++.++||-. +|+ .++...+-| ..|-.||-...
T Consensus 45 aLTFDDGp~~-----~t~~il~~L~~~~ikATFFv~G~~~~~~~~~~~p~--~~k~~~~~G-heIgnHt~~H~ 109 (254)
T 2iw0_A 45 ALTYDDGPFT-----FTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPD--TIRRMRADG-HLVGSHTYAHP 109 (254)
T ss_dssp EEEEESCSCT-----THHHHHHHHHHHTCCCEEEECSBSSSBTTSTTHHH--HHHHHHHTT-CEEEECCSSCC
T ss_pred EEEEECCCHH-----HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCHH--HHHHHHHCC-CEEEECCCCCC
T ss_conf 9988379637-----19999999997799389999687656433556999--999999779-88885067788
No 169
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=28.40 E-value=29 Score=14.86 Aligned_cols=72 Identities=15% Similarity=0.250 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHHHHC
Q ss_conf 568999998507212897101655533357822133378899999862026963899725------44441479999740
Q gi|254780438|r 80 NETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAAKLT 153 (261)
Q Consensus 80 ~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a~~~ 153 (261)
.++.++++.++.|.-+.+ +=||.+..... .+.++.|++.+.. +|.| |+....++..+.+.
T Consensus 16 ~~~al~i~~~~~~~i~~i----------KiG~~l~~~~G--~~~i~~l~~~~~~--If~DlK~~DIgnTv~~~~~~~~~~ 81 (246)
T 2yyu_A 16 KQEVERFLRPFAGTPLFV----------KVGMELYYQEG--PAIVAFLKEQGHA--VFLDLKLHDIPNTVKQAMKGLARV 81 (246)
T ss_dssp HHHHHHHHGGGTTSCCEE----------EECHHHHHHHT--HHHHHHHHHTTCE--EEEEEEECSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEE----------EECHHHHHHHC--HHHHHHHHHCCCC--EEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 999999999828854099----------98989986409--9999999974998--899963256289999999999852
Q ss_pred CCCEEEECCCCC
Q ss_conf 661465112111
Q gi|254780438|r 154 GADCIELYTGPY 165 (261)
Q Consensus 154 Gad~VElhTG~Y 165 (261)
|+|.+=+|.-..
T Consensus 82 ~~d~~tvh~~~g 93 (246)
T 2yyu_A 82 GADLVNVHAAGG 93 (246)
T ss_dssp TCSEEEEEGGGC
T ss_pred CCEEEEEECCCC
T ss_conf 872999945788
No 170
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=28.39 E-value=28 Score=15.05 Aligned_cols=47 Identities=13% Similarity=0.175 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCH
Q ss_conf 3378899999862026963899725444414799997406614651121110
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYG 166 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya 166 (261)
.+.+.+...+..+++.|+.+ +|-... ..+.|++.|...|-+++|.-+
T Consensus 126 ~~~~e~~~~i~~l~~~G~~v--vVG~~~---~~~~A~~~Gl~~ili~Sg~eS 172 (196)
T 2q5c_A 126 SSEDEITTLISKVKTENIKI--VVSGKT---VTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp CSGGGHHHHHHHHHHTTCCE--EEECHH---HHHHHHHTTCEEEECCCCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCE--EECCHH---HHHHHHHCCCCEEEEECCHHH
T ss_conf 68899999999999869989--999879---999999859978999654999
No 171
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, protein structure initiative; 2.00A {Bacillus halodurans c-125} SCOP: d.108.1.1
Probab=28.23 E-value=30 Score=14.84 Aligned_cols=110 Identities=11% Similarity=0.045 Sum_probs=60.4
Q ss_pred CCCCHHHHHHHHHHHCCCCCCCEEEEEECCC-HHH--HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3488899999887400013674158883485-689--9999850721289710165553335782213337889999986
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQFPKAELNIEGYPN-ETF--LNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVAR 126 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~-~e~--i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~ 126 (261)
|=++.+|+..|.+++..........-...|. .+. ..-...-.|+.+++|-+..+++.--.++........ .
T Consensus 8 R~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~------~ 81 (153)
T 1z4e_A 8 REATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYVRAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTY------Q 81 (153)
T ss_dssp EECCGGGHHHHHHHHHHSTTGGGTCCCCSSCCHHHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEEEEECSHH------H
T ss_pred EECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEEEECCCCC------C
T ss_conf 9898999999999998766412002346777167999999986299828999999999999999996124566------7
Q ss_pred HCCCCCEEEEEECCCCC---------CHHHHHHHHCCCCEEEECCCCC
Q ss_conf 20269638997254444---------1479999740661465112111
Q gi|254780438|r 127 LHNLGSRISLFADGNGN---------EHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 127 l~~~girvSLFIDpd~~---------q~~i~~a~~~Gad~VElhTG~Y 165 (261)
....+.-.+++|+|+-- +..++.|++.|+.+|.+.|.+-
T Consensus 82 ~~~~~~i~~l~V~~~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~ 129 (153)
T 1z4e_A 82 GSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQ 129 (153)
T ss_dssp HCEEEEEEEEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETT
T ss_pred CCCEEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 887899998985675769998647999999999986998999998589
No 172
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (ggdef & EAL domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans atcc 25259} PDB: 3ii8_A* 3n3t_A*
Probab=28.15 E-value=30 Score=14.83 Aligned_cols=123 Identities=13% Similarity=0.065 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 33788999998620269638997-25444414799997406614651121110244435643366688999876654156
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMD 193 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lg 193 (261)
.+...+...+..|++.|++++|= ...+.. .++....+.+|.|-|.-.-......... . ..-+.....+|+++|
T Consensus 160 ~~~~~~~~~i~~L~~~G~~ialDdfg~~~~--~~~~l~~l~~d~VKid~~~i~~~~~~~~-~---~~~l~~ii~~a~~~~ 233 (294)
T 2r6o_A 160 VMTDEVRTCLDALRARGVRLALDDFGTGYS--SLSYLSQLPFHGLKIDQSFVRKIPAHPS-E---TQIVTTILALARGLG 233 (294)
T ss_dssp GCCHHHHHHHHHHHHHTCEEEEEEETSSCB--CHHHHHHSCCCEEEECHHHHTTTTTSHH-H---HHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCCH--HHHHHHHCCCCCCCCCHHHHHHCCCCHH-H---HHHHHHHHHHHHHCC
T ss_conf 458999999999997098799847999712--3899864364320565999962235756-7---999999999999869
Q ss_pred CEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 235207898987799999736996388425999999999409999999999997410565
Q gi|254780438|r 194 LQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLDNT 253 (261)
Q Consensus 194 L~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~~ 253 (261)
+.|=|-.==|.+-+.. +..++ ++ +-=|.++ |-..+..++.+.+.+....+
T Consensus 234 ~~vIaeGVEt~~~l~~-l~~lG-id-~~QG~~~-------~~P~~~~~~~~~l~~~~~~~ 283 (294)
T 2r6o_A 234 MEVVAEGIETAQQYAF-LRDRG-CE-FGQGNLM-------STPQAADAFASLLDRQKASG 283 (294)
T ss_dssp CEEEECCCCSHHHHHH-HHHTT-CC-EECSTTT-------CCCEEHHHHHHHHHHHHC--
T ss_pred CEEEEEECCCHHHHHH-HHHCC-CC-EEECCCC-------CCCCCHHHHHHHHHHCCCCC
T ss_conf 9899984882999999-99869-99-9986901-------34699999999998562378
No 173
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=28.09 E-value=30 Score=14.82 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=19.2
Q ss_pred HHHHCCCCCEEEEE-ECCCCCCHHHHHHHHCCCCEEEECCC
Q ss_conf 98620269638997-25444414799997406614651121
Q gi|254780438|r 124 VARLHNLGSRISLF-ADGNGNEHSLQAAKLTGADCIELYTG 163 (261)
Q Consensus 124 i~~l~~~girvSLF-IDpd~~q~~i~~a~~~Gad~VElhTG 163 (261)
-..|+..|.+|... .+- |.+.-++.+.+.++|.|-+=..
T Consensus 109 a~~l~~~Gw~V~~LG~~v-p~e~l~~~~~~~~~~~v~lS~~ 148 (210)
T 1y80_A 109 AMMLESGGFTVYNLGVDI-EPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp HHHHHHTTCEEEECCSSB-CHHHHHHHHHHHCCSEEEEECC
T ss_pred HHHHHHCCCEEEECCCCC-CHHHHHHHHHHCCCCEEEEEEE
T ss_conf 999998898488567899-9999999998529999999843
No 174
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=27.55 E-value=30 Score=14.76 Aligned_cols=184 Identities=16% Similarity=0.154 Sum_probs=110.8
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH----HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 9899999999749989998247883348889999----988740001367415888348568999998507212897101
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLP----EIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQITLVPD 100 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~----~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvtLVPe 100 (261)
+.++....++++|++-| ++|+- ...+.++. .|+++|..+ +++|=|. ...++|.+..-+-|-|=.+
T Consensus 27 ~~~~~v~~al~~Gv~~i--qlR~K--~~~~~~~~~~a~~l~~i~~~~--~~~liIn-----d~~~lA~~~~adGvHl~~~ 95 (215)
T 1xi3_A 27 PEVESVREALEGGATAI--QMRIK--NAPTREMYEIGKTLRQLTREY--DALFFVD-----DRVDVALAVDADGVQLGPE 95 (215)
T ss_dssp CHHHHHHHHHHTTCSEE--EECCC--SCCHHHHHHHHHHHHHHHHHT--TCEEEEE-----SCHHHHHHHTCSEEEECTT
T ss_pred CHHHHHHHHHHCCCCEE--EECCC--CCCHHHHHHHHHHHHHHHHHH--CCEEEEE-----CHHHHHHHHCCCEEEECCC
T ss_conf 88999999998799999--98779--989999999999999999984--9989997-----8399998736888970310
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 65553335782213337889999986202696389972544441479999740661465112111024443564336668
Q gi|254780438|r 101 DPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLN 180 (261)
Q Consensus 101 ~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~ 180 (261)
.++. .....+.. +..++.-.. +.+ .+..|.+.|+|.|=+-.--... .++.....-++
T Consensus 96 ---------~~~~--------~~~~~~~~-~~~ig~s~h-~~~--e~~~a~~~g~DYi~~gpvf~T~--sk~~~~~~g~~ 152 (215)
T 1xi3_A 96 ---------DMPI--------EVAKEIAP-NLIIGASVY-SLE--EALEAEKKGADYLGAGSVFPTK--TKEDARVIGLE 152 (215)
T ss_dssp ---------SCCH--------HHHHHHCT-TSEEEEEES-SHH--HHHHHHHHTCSEEEEECSSCC------CCCCCHHH
T ss_pred ---------CCHH--------HHHHHHCC-CCEEEECCC-HHH--HHHHHHHCCCCEEEECCCCCCC--CCCCCCCCCHH
T ss_conf ---------1016--------77765157-818985066-599--9999987699889962443068--88888876588
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999876654156235207898987799999736996388425999999999409999999999997410
Q gi|254780438|r 181 KLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHL 250 (261)
Q Consensus 181 ~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~ 250 (261)
.++ +++....+-|-|==|+|-+|+..++ +. +.+=+-++=+|... --.+++++++++++++.+
T Consensus 153 ~l~---~~~~~~~~Pv~AiGGI~~~ni~~~~-~~-Ga~giAvisaI~~~---~dp~~~~~~l~~~~~~~~ 214 (215)
T 1xi3_A 153 GLR---KIVESVKIPVVAIGGINKDNAREVL-KT-GVDGIAVISAVMGA---EDVRKATEELRKIVEEVL 214 (215)
T ss_dssp HHH---HHHHHCSSCEEEESSCCTTTHHHHH-TT-TCSEEEESHHHHTS---SSHHHHHHHHHHHHHHHH
T ss_pred HHH---HHHHHCCCCCEEECCCCHHHHHHHH-HC-CCCEEEEHHHHHCC---CCHHHHHHHHHHHHHHHH
T ss_conf 999---9987357982787799999999999-80-99899972997779---999999999999999963
No 175
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=27.25 E-value=25 Score=15.39 Aligned_cols=31 Identities=29% Similarity=0.364 Sum_probs=22.0
Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 9899982478833488899999887400013
Q gi|254780438|r 38 ASGLTVHPRPDQRHIRYTDLPEIRRLIDEQF 68 (261)
Q Consensus 38 adgITvH~R~DrRHI~~~Dv~~l~~~~~~~~ 68 (261)
..+--.-||+.----.++|+.+.++.+.+..
T Consensus 76 ~~~~~~~~~~~~~~~~ye~~~e~a~~i~~~~ 106 (373)
T 2p4s_A 76 TSGPFHMPRTEHVGYTYDTLQEIATYLLERT 106 (373)
T ss_dssp --------------CCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 4798635777668868999999999999857
No 176
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.22 E-value=31 Score=14.72 Aligned_cols=15 Identities=13% Similarity=0.107 Sum_probs=9.6
Q ss_pred HHHHHHHCCCCEEEE
Q ss_conf 999999749989998
Q gi|254780438|r 29 IGKIALQSGASGLTV 43 (261)
Q Consensus 29 ~a~~~~~~GadgITv 43 (261)
-.+.+..+|++-|.+
T Consensus 42 ~l~~~K~~G~N~Vrt 56 (612)
T 3d3a_A 42 RIKMCKALGMNTICL 56 (612)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHHCCCCEEEE
T ss_conf 999999729989996
No 177
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=27.18 E-value=31 Score=14.71 Aligned_cols=176 Identities=15% Similarity=0.111 Sum_probs=84.2
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-H---HHHHHHH------
Q ss_conf 88689989999999974998999824788334888999998874000136741588834856-8---9999985------
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-T---FLNLCER------ 89 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e---~i~ia~~------ 89 (261)
-+.|||+-......+.+|++-+||-+|-= -+.+..-..+-+.+....-.+-=|--|.-|. | .-.++.+
T Consensus 19 Tgky~s~~~~~~ai~aSgaeivTvAlRR~--~~~~~~~~~~l~~i~~~~~~~LPNTAGc~tA~EAVr~A~lARE~~~t~w 96 (264)
T 1xm3_A 19 TGKYPSFDIQKEAVAVSESDILTFAVRRM--NIFEASQPNFLEQLDLSKYTLLPNTAGASTAEEAVRIARLAKASGLCDM 96 (264)
T ss_dssp CSCSSCHHHHHHHHHHHTCSEEEEETTSS--TTC-------CTTCCGGGSEEEEECTTCSSHHHHHHHHHHHHHTTCCSS
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEEEE--CCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 38999999999999986998799999765--3777773578987500684874644255789999999999997449976
Q ss_pred ----HCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf ----0721289710165553335782213337889999986202696389972544441479999740661465112111
Q gi|254780438|r 90 ----YKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 90 ----ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
+-||.-||-||. ..+-+.-+.|-+.|-.|--++.+||.. -+...++|+.+|=----|.
T Consensus 97 IKLEVi~D~~~LlPD~----------------~etl~Aae~Lv~eGF~VlpY~~~D~v~--akrLed~Gc~avMPlgsPI 158 (264)
T 1xm3_A 97 IKVEVIGCSRSLLPDP----------------VETLKASEQLLEEGFIVLPYTSDDVVL--ARKLEELGVHAIMPGASPI 158 (264)
T ss_dssp EEECCBCCTTTCCBCH----------------HHHHHHHHHHHHTTCCEEEEECSCHHH--HHHHHHHTCSCBEECSSST
T ss_pred EEEEECCCCCCCCCCH----------------HHHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHHCCCEEEEEECCCC
T ss_conf 8999548987759884----------------789999999997898799960789899--9999976991998513401
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf 024443564--3366688999876654156235207898987799999736996388425999
Q gi|254780438|r 166 GACYNNPQQ--ERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAF 226 (261)
Q Consensus 166 a~a~~~~~~--~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHai 226 (261)
. .++- ....++.|. +. .+.-+-|-||=|---+-- ... .+. .+-|=+--||
T Consensus 159 G----Sg~Gl~n~~~l~~i~---e~-~~vPvIVDAGIG~pSdAa-~AM-ElG-~DaVLvNTAI 210 (264)
T 1xm3_A 159 G----SGQGILNPLNLSFII---EQ-AKVPVIVDAGIGSPKDAA-YAM-ELG-ADGVLLNTAV 210 (264)
T ss_dssp T----CCCCCSCHHHHHHHH---HH-CSSCBEEESCCCSHHHHH-HHH-HTT-CSEEEESHHH
T ss_pred C----CCCCCCCHHHHHHHH---HC-CCCCEEEECCCCCHHHHH-HHH-HCC-CCEEEECHHH
T ss_conf 3----687767989999999---66-898889847989888999-999-745-8899855465
No 178
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid biosynthesis, cytoplasm, lysine biosynthesis; HET: AKG; 1.80A {Thermus thermophilus HB27} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=26.93 E-value=31 Score=14.68 Aligned_cols=182 Identities=14% Similarity=0.133 Sum_probs=103.2
Q ss_pred HHHH---HCCCCCCC--CHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHH
Q ss_conf 2232---20788689--9899999999749989998-2478833488899999887400013674158883485689999
Q gi|254780438|r 13 AVLR---NRRNLPWP--NLVHIGKIALQSGASGLTV-HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNL 86 (261)
Q Consensus 13 AtLR---naRg~~~P--~~~~~a~~~~~~GadgITv-H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~i 86 (261)
-||| |+-|..++ +-++.+....++|.+.|-+ +|.--.. -.+++..++++. .+.+...-..+..+-.+.
T Consensus 9 tTLRDG~Q~~~~~fs~~~k~~i~~~L~~~Gv~~IEvG~P~~~p~--~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~ 82 (382)
T 2ztj_A 9 STLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVASPQ--SRKDAEVLASLG----LKAKVVTHIQCRLDAAKV 82 (382)
T ss_dssp EEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTSCHH--HHHHHHHHHTSC----CSSEEEEEEESCHHHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH--HHHHHHHHHHCC----CCCCCEEHHHCCCCHHHH
T ss_conf 99665477999998999999999999981989999878837878--899999998628----863220001016504688
Q ss_pred HHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC---CCCC----CHHHHHHHHCCCCEEE
Q ss_conf 98507212897101655533357822133378899999862026963899725---4444----1479999740661465
Q gi|254780438|r 87 CERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD---GNGN----EHSLQAAKLTGADCIE 159 (261)
Q Consensus 87 a~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID---pd~~----q~~i~~a~~~Gad~VE 159 (261)
+.+...+.+.++.-.........|++.....+...+.+...++.|..+++.+. .... ...+..+.+.|+|+|-
T Consensus 83 a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~v~~a~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~gad~I~ 162 (382)
T 2ztj_A 83 AVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPYVDRVG 162 (382)
T ss_dssp HHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGGCSEEE
T ss_pred HHHCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 87447735899970568999885031999999999999999972775068861255667538899999998750052799
Q ss_pred ECCCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCEEEECC--CCCHHHH
Q ss_conf 11211102444--356433666889998766541562352078--9898779
Q gi|254780438|r 160 LYTGPYGACYN--NPQQERIFLNKLAITAQLAQKMDLQINAGH--DLTIQNI 207 (261)
Q Consensus 160 lhTG~Ya~a~~--~~~~~~~el~~i~~aa~~A~~lgL~VnAGH--gLn~~Nl 207 (261)
+|+... .|.+....+..+++. +..+..+++|.=- ||-.-|.
T Consensus 163 -----l~DT~G~~~P~~v~~~v~~l~~~--~~~~~~i~~H~HNd~GlA~ANa 207 (382)
T 2ztj_A 163 -----LADTVGVATPRQVYALVREVRRV--VGPRVDIEFHGHNDTGCAIANA 207 (382)
T ss_dssp -----EEETTSCCCHHHHHHHHHHHHHH--HTTTSEEEEEEBCTTSCHHHHH
T ss_pred -----EECCCCCCCCHHHHHHHHHHHHH--CCCCCCEEEEECCCCCHHHHHH
T ss_conf -----86788678836669999999985--4888772573078646699999
No 179
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, structural genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=26.91 E-value=27 Score=15.10 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=20.5
Q ss_pred HHCCCCCCC-CHHHHHHHHHH-CCCCEEE--EECCCCC
Q ss_conf 220788689-98999999997-4998999--8247883
Q gi|254780438|r 16 RNRRNLPWP-NLVHIGKIALQ-SGASGLT--VHPRPDQ 49 (261)
Q Consensus 16 RnaRg~~~P-~~~~~a~~~~~-~GadgIT--vH~R~Dr 49 (261)
|-+++ .+| |=+.+-..|.. .|||+|= |++--|.
T Consensus 30 RG~~~-~~pENTl~af~~A~~~~Gad~iE~DV~~T~Dg 66 (287)
T 2oog_A 30 RGASG-YAPEHTFQAYDKSHNELKASYIEIDLQRTKDG 66 (287)
T ss_dssp TTTTT-TSCSSSHHHHHHHHHTSCCSEEEEEEEECTTC
T ss_pred CCCCC-CCCCCHHHHHHHHHHHCCCCEEEEEEEEECCC
T ss_conf 99899-99720699999999975999899878990499
No 180
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=26.89 E-value=31 Score=14.68 Aligned_cols=133 Identities=11% Similarity=0.070 Sum_probs=60.0
Q ss_pred CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH-H---HHHHHHHH-CCCE
Q ss_conf 88689989999999974998999824788334888999998874000136741588834856-8---99999850-7212
Q gi|254780438|r 20 NLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE-T---FLNLCERY-KPEQ 94 (261)
Q Consensus 20 g~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~-e---~i~ia~~i-kP~q 94 (261)
-+.|||+-...+..+.+|++=+||-+|-= -+++.+-..+-..+. .+ .+--|--|..+. | .-.++.+. .-+|
T Consensus 19 Tgky~s~~~~~~ai~aSGaeiVTVAlRR~--~~~~~~~~~~~~~~~-~~-~lLPNTAGc~ta~eAv~~A~laRE~~g~~~ 94 (268)
T 2htm_A 19 SGKYEDFGVMREAIAAAKAEVVTVSVRRV--ELKAPGHVGLLEALE-GV-RLLPNTAGARTAEEAVRLARLGRLLTGERW 94 (268)
T ss_dssp CSSCSCHHHHHHHHHHTTCSEEEEEEEEC--C-------CHHHHTT-TS-EEEEBCTTCCSHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEECC--CCCCCCCCCHHHCHH-HE-EECCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 38999999999999985997799987204--577888742012312-32-776502577759999999999999529875
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 89710165553335782213337889999986202696389972544441479999740661465112111
Q gi|254780438|r 95 ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 95 vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
+-| |+..|-- .+..+.-.+-+..+.|-+.|-.|=-++-+|+.. .+...++|+..|==---|+
T Consensus 95 IKL------EVi~D~~-~L~PD~~etl~Aae~Lv~~GF~VlpY~~~D~~~--ak~Le~~Gc~aVMPl~sPI 156 (268)
T 2htm_A 95 VKL------EVIPDPT-YLLPDPLETLKAAERLIEEDFLVLPYMGPDLVL--AKRLAALGTATVMPLAAPI 156 (268)
T ss_dssp EBC------CCCSCTT-TTCCCHHHHHHHHHHHHHTTCEECCEECSCHHH--HHHHHHHTCSCBEEBSSST
T ss_pred EEE------EECCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH--HHHHHHCCCCEEEECHHHH
T ss_conf 887------8538854-679876569999999985896899956878999--9999876986787324243
No 181
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; 15025322, structural genomics, JCSG, protein structure initiative, PSI; HET: NAI UNL; 2.05A {Clostridium acetobutylicum atcc 824} SCOP: c.2.1.2
Probab=26.87 E-value=29 Score=14.90 Aligned_cols=13 Identities=15% Similarity=-0.010 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999997
Q gi|254780438|r 235 VKEAVFCFRRACG 247 (261)
Q Consensus 235 L~~aI~~~~~ii~ 247 (261)
+++++++|.+.|+
T Consensus 279 ~~e~l~~~l~~lk 291 (292)
T 1vl0_A 279 WKESLKEYIDLLQ 291 (292)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999966
No 182
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, structural genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=26.82 E-value=29 Score=14.87 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=44.6
Q ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC------CCCCCHHHHHH-HHCCCC
Q ss_conf 99998507212897101655533357822133378899999862026963899725------44441479999-740661
Q gi|254780438|r 84 LNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD------GNGNEHSLQAA-KLTGAD 156 (261)
Q Consensus 84 i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID------pd~~q~~i~~a-~~~Gad 156 (261)
..++..++|.-|++=|-- +.=.-.|+. -...|+++++.+++.|..| |.| |+..+...++. ...++|
T Consensus 119 ~~iIdat~~~v~a~Kpq~--afFe~~G~~---G~~~Le~ii~~l~~~g~~V--flDlK~gDIgnTv~~ya~a~~~~~~~D 191 (353)
T 2ffc_A 119 FYIINETKEYALAYKMNF--AFYLPYGSL---GVDVLKNVFDYLHHLNVPT--ILDIKMNDIGNTVKHYRKFIFDYLRSD 191 (353)
T ss_dssp HHHHHHHGGGCSEEEEEG--GGGSTTTHH---HHHHHHHHHHHHHHHTCCE--EEEEEECCCHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHCCCEEEEECCH--HHHHHHCHH---HHHHHHHHHHHHHHCCCEE--EEECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 999997268507992709--999860798---9999999999998679918--974112682389999999988534785
Q ss_pred EEEECC
Q ss_conf 465112
Q gi|254780438|r 157 CIELYT 162 (261)
Q Consensus 157 ~VElhT 162 (261)
.|-+|.
T Consensus 192 avTVhp 197 (353)
T 2ffc_A 192 SCTANI 197 (353)
T ss_dssp EEEECC
T ss_pred EEEECC
T ss_conf 999867
No 183
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A*
Probab=26.80 E-value=27 Score=15.17 Aligned_cols=10 Identities=30% Similarity=0.534 Sum_probs=3.7
Q ss_pred CCEEEEEECC
Q ss_conf 9638997254
Q gi|254780438|r 131 GSRISLFADG 140 (261)
Q Consensus 131 girvSLFIDp 140 (261)
|.+|-|++.+
T Consensus 176 GT~I~L~Lk~ 185 (269)
T 1qy5_A 176 GTTITLVLKE 185 (269)
T ss_dssp EEEEEEEECG
T ss_pred CEEEEEEECC
T ss_conf 6499999877
No 184
>3hh8_A Metal ABC transporter substrate-binding lipoprotein; metal binding, cell membrane, copper, copper transport, ION transport; 1.87A {Streptococcus pyogenes serotype M1} PDB: 1psz_A
Probab=26.64 E-value=32 Score=14.65 Aligned_cols=41 Identities=12% Similarity=0.293 Sum_probs=19.8
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHH-HHHHCCCCEEE
Q ss_conf 8899999862026963899725444414799-99740661465
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNGNEHSLQ-AAKLTGADCIE 159 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~~q~~i~-~a~~~Gad~VE 159 (261)
..|..+++.+++.++++ +|.+|..+.+.++ .|+++|+..+.
T Consensus 219 ~~l~~l~~~ik~~~v~~-if~e~~~~~~~~~~la~e~gv~i~~ 260 (294)
T 3hh8_A 219 DQISSLIEKLKVIKPSA-LFVESSVDRRPMETVSKDSGIPIYS 260 (294)
T ss_dssp HHHHHHHHHHHHSCCSC-EEEETTSCSHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHHHHCCCEEC
T ss_conf 99999999998739978-9976989919999999981997641
No 185
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=26.47 E-value=32 Score=14.63 Aligned_cols=108 Identities=12% Similarity=0.172 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH---HCCCCCCCEEEEEECCC---------HH----HHHHHH
Q ss_conf 989999999974998999824788334888999998874---00013674158883485---------68----999998
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRL---IDEQFPKAELNIEGYPN---------ET----FLNLCE 88 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~---~~~~~~~~elNiEg~p~---------~e----~i~ia~ 88 (261)
...+......+.|+..|-++.-+.- ......+..|.++ +.++ ++-+-++.--. ++ +..++.
T Consensus 32 ~~~~di~~~k~~G~N~VRl~~~~~~-~~~~~~l~~ld~~v~~a~~~--Gi~Vi~dlh~~~~~~~~~~~~~~~~~~~~~~~ 108 (294)
T 2whl_A 32 TASTAIPAIAEQGANTIRIVLSDGG-QWEKDDIDTIREVIELAEQN--KMVAVVEVHDATGRDSRSDLNRAVDYWIEMKD 108 (294)
T ss_dssp GHHHHHHHHHHTTCSEEEEEECCSS-SSCCCCHHHHHHHHHHHHTT--TCEEEEEECTTTTCCCHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCC-CCCCHHHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7999999999769987997466887-55843899999999999978--99999713423466640139999999999999
Q ss_pred HHC--CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 507--212897101655533357822133378899999862026963899725
Q gi|254780438|r 89 RYK--PEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFAD 139 (261)
Q Consensus 89 ~ik--P~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFID 139 (261)
.++ |..+. -|--+|-.. ..+...........+..+++.+-..-++++
T Consensus 109 ~~~~~~~v~~--~~l~NEp~~--~~~~~~~~~~~~~~~~~ir~~~~~~~i~v~ 157 (294)
T 2whl_A 109 ALIGKEDTVI--INIANEWYG--SWDGSAWADGYIDVIPKLRDAGLTHTLMVD 157 (294)
T ss_dssp HHTTCTTTEE--EECCTTCCC--SSCHHHHHHHHHHHHHHHHHTTCCSCEEEE
T ss_pred HHCCCCCEEE--EEEECCCCC--CCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 8568997589--984036788--999999999999999999963897579995
No 186
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=26.30 E-value=32 Score=14.61 Aligned_cols=24 Identities=38% Similarity=0.253 Sum_probs=16.9
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 99899999999749989998247883
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLTVHPRPDQ 49 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgITvH~R~Dr 49 (261)
.++.+..+.+...|||- |-+|=|-
T Consensus 10 ~~~~e~l~~a~~~gaD~--vElRlD~ 33 (219)
T 2egz_A 10 TNFSENLKKAKEKGADI--VELRVDQ 33 (219)
T ss_dssp TTHHHHHHHHHHHTCSE--EEEEGGG
T ss_pred CCHHHHHHHHHHCCCCE--EEEEECC
T ss_conf 99999999997569998--9998515
No 187
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resistance; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=26.01 E-value=32 Score=14.57 Aligned_cols=62 Identities=19% Similarity=0.258 Sum_probs=33.9
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE-------------EEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf 8971016555333578221333788999998620269638-------------997254444147999974066146511
Q gi|254780438|r 95 ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRI-------------SLFADGNGNEHSLQAAKLTGADCIELY 161 (261)
Q Consensus 95 vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girv-------------SLFIDpd~~q~~i~~a~~~Gad~VElh 161 (261)
+.+-+....+-.+-+.+-+.-..+.+..+.++|++.|+++ -.|-||| =..||||
T Consensus 54 ~~~~~~~~~~~~~~~~~~f~v~~~dvd~~~~~l~~~G~~i~~~~~~~~~~~~~~y~~DPD-------------G~~iEl~ 120 (139)
T 1r9c_A 54 VAIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDD-------------NHMFELH 120 (139)
T ss_dssp EEEEECCCCSSCCSCEEEEECCGGGHHHHHHHHHHHTCCBCCCCC-----CCEEEEECTT-------------SCEEEEE
T ss_pred EEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEECCC-------------CCEEEEE
T ss_conf 754026777889864689985087799999999987991635883367987999999899-------------9989999
Q ss_pred CCCCHHHH
Q ss_conf 21110244
Q gi|254780438|r 162 TGPYGACY 169 (261)
Q Consensus 162 TG~Ya~a~ 169 (261)
||.+-...
T Consensus 121 ~~~~~~~~ 128 (139)
T 1r9c_A 121 TGTLTERL 128 (139)
T ss_dssp CCCHHHHH
T ss_pred ECCHHHHH
T ss_conf 89837788
No 188
>1x7f_A Outer surface protein; structural genomics, unknown function, protein structure initiative, MCSG, PSI; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=25.93 E-value=32 Score=14.56 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 788999998620269638997254
Q gi|254780438|r 117 QALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 117 ~~~L~~~i~~l~~~girvSLFIDp 140 (261)
.+++.+.-+.|++.|+++.-||--
T Consensus 183 ~~~f~~~N~~~k~~gi~~~AFI~g 206 (385)
T 1x7f_A 183 YDYFIRCSERFKKHGIRSAAFITS 206 (385)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 999999999999769976999747
No 189
>2dqw_A Dihydropteroate synthase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2dza_A* 2dzb_A*
Probab=25.80 E-value=33 Score=14.55 Aligned_cols=122 Identities=11% Similarity=0.124 Sum_probs=65.5
Q ss_pred CCCCCCH---HHHHHHHHHCCCCEEEEE---CCCCCCCCCHHHH-HHHHHHHCC-CCCCCEEEEE---------------
Q ss_conf 8868998---999999997499899982---4788334888999-998874000-1367415888---------------
Q gi|254780438|r 20 NLPWPNL---VHIGKIALQSGASGLTVH---PRPDQRHIRYTDL-PEIRRLIDE-QFPKAELNIE--------------- 76 (261)
Q Consensus 20 g~~~P~~---~~~a~~~~~~GadgITvH---~R~DrRHI~~~Dv-~~l~~~~~~-~~~~~elNiE--------------- 76 (261)
||.+.++ +..|...++.|||-|-+= -||...-+..+.- .++..++.. ...++++-+.
T Consensus 45 gg~~~~~~~al~~a~~mi~~GAdiIDIGgeSTrPga~~i~~~eE~~Rl~pvi~~~~~~~~~iSIDT~~~~Va~~al~~Ga 124 (294)
T 2dqw_A 45 GGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGA 124 (294)
T ss_dssp --------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEEECSCHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCC
T ss_conf 87588999999999999987998999798127999866770888864041332211579707686898999999996497
Q ss_pred -------ECCCHHHHHHHHHHCCCEEEEE----ECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf -------3485689999985072128971----01655533357822133378899999862026963899725444
Q gi|254780438|r 77 -------GYPNETFLNLCERYKPEQITLV----PDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNG 142 (261)
Q Consensus 77 -------g~p~~e~i~ia~~ikP~qvtLV----Pe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~ 142 (261)
|.-.++|+..+.+...-.|++- |-+..+-.....--+..-..++..-++.+.+.||. .+.|||..
T Consensus 125 ~iINDVsg~~~~~~~~~~~~~~~~~vim~~~~~~~~~~~~~~~~~d~i~~i~~~~~~~i~~~~~~Gi~-~iiiDPGi 200 (294)
T 2dqw_A 125 HLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP-QVVLDPGF 200 (294)
T ss_dssp SEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCS-CEEEECCT
T ss_pred EEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC-EEEECCCC
T ss_conf 29960443456057899986178569972367982555541135650789999999999999977995-55321677
No 190
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=25.64 E-value=33 Score=14.53 Aligned_cols=14 Identities=29% Similarity=0.351 Sum_probs=6.4
Q ss_pred HHHHHHCCCCEEEE
Q ss_conf 99997406614651
Q gi|254780438|r 147 LQAAKLTGADCIEL 160 (261)
Q Consensus 147 i~~a~~~Gad~VEl 160 (261)
|++.+++|++.|||
T Consensus 302 LdYLk~LGvtaI~L 315 (877)
T 3faw_A 302 LDYLQKLGVTHIQL 315 (877)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHCCCCEEEE
T ss_conf 78999759988996
No 191
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=25.60 E-value=33 Score=14.52 Aligned_cols=232 Identities=8% Similarity=0.026 Sum_probs=112.4
Q ss_pred CCCCCCHHHHHH--HHCCC--CCCCCHHHHHHHHHHCC-CCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE---EE
Q ss_conf 533221443223--22078--86899899999999749-989998247883348889999988740001367415---88
Q gi|254780438|r 4 SVSVNLNAVAVL--RNRRN--LPWPNLVHIGKIALQSG-ASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL---NI 75 (261)
Q Consensus 4 ~LsVNidhiAtL--RnaRg--~~~P~~~~~a~~~~~~G-adgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el---Ni 75 (261)
+.|+++.+.+.. |=++. +...++.+....+-+.| -+++=+|..-+ .+.|+..+++.+.+. ++++ |.
T Consensus 9 ~f~~~~w~~~~~~~~f~~~~~~~~~~~~d~i~~a~~~g~~~~vel~~p~~----~~~~~~elk~~l~~~--GL~v~~~~~ 82 (333)
T 3ktc_A 9 EFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFT----PGVTLSEVKDALKDA--GLKAIGITP 82 (333)
T ss_dssp CEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCS----TTCCHHHHHHHHHHH--TCEEEEEEE
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCC----CCCCHHHHHHHHHHC--CCEEEEEEC
T ss_conf 45579866778888887787789999899999998618887786278887----756899999999975--995889715
Q ss_pred EE-----------CCCH-----------HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC--C
Q ss_conf 83-----------4856-----------8999998507212897101655533357822133378899999862026--9
Q gi|254780438|r 76 EG-----------YPNE-----------TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNL--G 131 (261)
Q Consensus 76 Eg-----------~p~~-----------e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~--g 131 (261)
-+ +|.+ +.++++.+.--..+++.|-...- ...+..+.....+.+.+.+..+-+. +
T Consensus 83 ~~~~~~~~~G~lt~pD~~~R~~ai~~~k~~id~A~~lGa~~v~v~~g~~g~-~~~~~~~~~~~~~~~~e~l~~i~~~a~~ 161 (333)
T 3ktc_A 83 EIYLQKWSRGAFTNPDPAARAAAFELMHESAGIVRELGANYVKVWPGQDGW-DYPFQVSHKNLWKLAVDGMRDLAGANPD 161 (333)
T ss_dssp CTTSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEE-SSTTSSCHHHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 886655566767796999999999999999999998499726862357887-7786436999999999999999987430
Q ss_pred CEEEEEECCC----------CCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE----
Q ss_conf 6389972544----------44147999974066146511211102444356433666889998766541562352----
Q gi|254780438|r 132 SRISLFADGN----------GNEHSLQAAKLTGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQIN---- 197 (261)
Q Consensus 132 irvSLFIDpd----------~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~Vn---- 197 (261)
+++++-++|. .. ..+....++|.+.+-++=-.+ +++-...... ..+..+..+.+-..+-+|
T Consensus 162 ~gv~i~~E~~~p~~~~~~~t~~-~~~~~i~~v~~~~vgl~lD~g-H~~~~ge~~~---~~i~~~~~~~~l~hvH~~D~~~ 236 (333)
T 3ktc_A 162 VKFAIEYKPREPRVKMTWDSAA-RTLLGIEDIGLDNVGVLLDFG-HALYGGESPA---DSAQLIIDRGRLFGMDVNDNLR 236 (333)
T ss_dssp SEEEEECCSCSSSSEESSCSHH-HHHHHHHHHTCTTEEEEEEHH-HHHHTTCCHH---HHHHHHHHTTCEEEEEBCBCCS
T ss_pred CCEEEEEECCCCCCCCCCCCHH-HHHHHHHHCCCCCCEEEECCC-HHHHCCCCHH---HHHHHHHHCCCEEEEEECCCCC
T ss_conf 6769997325776661479899-999999861898536875220-5765279999---9999998548778784157899
Q ss_pred -------ECCCCCHHH---HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -------078989877---999997369963884259999999994099999999999974
Q gi|254780438|r 198 -------AGHDLTIQN---IPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQ 248 (261)
Q Consensus 198 -------AGHgLn~~N---l~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~ 248 (261)
.|+| +..+ +-..++.+.+=-=++|=.+=-.+.-.-++..+|+-++++..+
T Consensus 237 ~~d~~l~~G~~-~~~~~~~i~~~L~~~gY~G~i~~d~f~~~~~~i~a~~~si~~~~~~~~~ 296 (333)
T 3ktc_A 237 GWDDDLVVGTV-HMTEIFEFFYVLKINNWQGVWQLDQFPFRENHVEAAQLSIRFLKHIYRA 296 (333)
T ss_dssp SSCCCBCTTSS-CHHHHHHHHHHHHHTTCCCCEEECCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 87778678885-7899999999999749985389985788888689999999999999999
No 192
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=25.55 E-value=33 Score=14.52 Aligned_cols=12 Identities=33% Similarity=0.313 Sum_probs=5.8
Q ss_pred EEEHHHHHHHHH
Q ss_conf 842599999999
Q gi|254780438|r 220 ISVGHAFAATAL 231 (261)
Q Consensus 220 vsIGHaiIseAl 231 (261)
++||-.-+..++
T Consensus 305 ~s~g~~ri~~~l 316 (421)
T 1h4v_B 305 FAFGVERVALAL 316 (421)
T ss_dssp EEEEHHHHHHHH
T ss_pred CCCCHHHHHHHH
T ss_conf 232499999999
No 193
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=25.42 E-value=33 Score=14.50 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=20.0
Q ss_pred HHHHHHCCCCCEEEEEEC------CCCCCHHHHHHHHCCCCEEEECC
Q ss_conf 999862026963899725------44441479999740661465112
Q gi|254780438|r 122 KTVARLHNLGSRISLFAD------GNGNEHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 122 ~~i~~l~~~girvSLFID------pd~~q~~i~~a~~~Gad~VElhT 162 (261)
.+++.|++.|.+ +|.| |+.-.+.++.+.+.|+|.+-+|.
T Consensus 49 ~~i~~L~~~g~~--IflDlKl~DIpnTv~~~v~~~~~~g~d~vtvH~ 93 (213)
T 1vqt_A 49 KIFDELAKRNLK--IILDLKFCDIPSTVERSIKSWDHPAIIGFTVHS 93 (213)
T ss_dssp HHHHHHHTTTCE--EEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEG
T ss_pred HHHHHHHHCCCC--EEEEEECCCCHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 999999977996--899842157479999999998706997999878
No 194
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.71A {Bacillus subtilis subsp}
Probab=25.35 E-value=33 Score=14.49 Aligned_cols=144 Identities=10% Similarity=0.015 Sum_probs=82.6
Q ss_pred HHHHH---CCCCCCC--CHHHHHHHHHHCCCCEEEE----ECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHH
Q ss_conf 22322---0788689--9899999999749989998----2478833488899999887400013674158883485689
Q gi|254780438|r 13 AVLRN---RRNLPWP--NLVHIGKIALQSGASGLTV----HPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETF 83 (261)
Q Consensus 13 AtLRn---aRg~~~P--~~~~~a~~~~~~GadgITv----H~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~ 83 (261)
.|||. +-|..++ +-+..+....++|.+-|-+ +|+... +..|......... ..+...+-. ..+..+-
T Consensus 12 ~TLRDG~Qs~~~~~s~~~k~~i~~~L~~~Gv~~IEvG~~~~~~~~~---~~~d~~~~~~~~~-~~~~~~~~~-~~~~~~~ 86 (307)
T 1ydo_A 12 VGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIP---ALRDAIDVAKGID-REKGVTYAA-LVPNQRG 86 (307)
T ss_dssp CHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCG---GGTTHHHHHHHSC-CCTTCEEEE-ECCSHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH---HHHHHHHHHHCCC-CCCCCEEEE-ECCCCHH
T ss_conf 9988536598998899999999999998199989957875844177---7888999996346-355634542-0146778
Q ss_pred HHHHHHHCCCE-EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC----------CCCC--HHHHHH
Q ss_conf 99998507212-8971016555333578221333788999998620269638997254----------4441--479999
Q gi|254780438|r 84 LNLCERYKPEQ-ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG----------NGNE--HSLQAA 150 (261)
Q Consensus 84 i~ia~~ikP~q-vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp----------d~~q--~~i~~a 150 (261)
.+.+....... ..+++-........-|+......+...+.+...+..+..++.++.- ++++ ...+.+
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEAL 166 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99998379985889876437777674113599998767999999985385366544222676556653165799999999
Q ss_pred HHCCCCEEEEC
Q ss_conf 74066146511
Q gi|254780438|r 151 KLTGADCIELY 161 (261)
Q Consensus 151 ~~~Gad~VElh 161 (261)
.+.|+|+|-|-
T Consensus 167 ~~~g~d~i~l~ 177 (307)
T 1ydo_A 167 FEFGISELSLG 177 (307)
T ss_dssp HHHTCSCEEEE
T ss_pred HHCCCEEEEEC
T ss_conf 97298067604
No 195
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=25.30 E-value=33 Score=14.49 Aligned_cols=55 Identities=11% Similarity=-0.014 Sum_probs=33.1
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf 689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE 81 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~ 81 (261)
+.....++.+...++|||-|-+= =.| =+.+..+..+.+.... .+++.-++.+...
T Consensus 18 d~~~t~~~i~~l~e~GaDiIEiG-~SD--piadgpviq~~~~~~~--~~~p~i~~~~~~~ 72 (240)
T 1viz_A 18 NKDLPDEQLEILCESGTDAVIIG-GSD--GVTEDNVLRMMSKVRR--FLVPCVLEVSAIE 72 (240)
T ss_dssp TSCCCHHHHHHHHTSCCSEEEEC-C------CHHHHHHHHHHHTT--SSSCEEEECSCGG
T ss_pred CCCCHHHHHHHHHHCCCCEEEEC-CCC--CCCCCHHHHHHHHHHH--CCCCEEEEEHHHH
T ss_conf 99857999999997499999987-987--5455689999987410--4998898720024
No 196
>3bpw_A Orotidine 5'-phosphate decarboxylase; P. falciparum, orotidine 5'- monophosphate decarboxylase, XMP, lyase, pyrimidine biosynthesis; HET: XMP; 1.70A {Plasmodium falciparum} PDB: 2qaf_A* 3bar_A* 2q8z_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A
Probab=24.91 E-value=33 Score=14.48 Aligned_cols=70 Identities=10% Similarity=0.039 Sum_probs=44.6
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC---CCCCHHHHH-H----HHCCCC
Q ss_conf 99985072128971016555333578221333788999998620269638997254---444147999-9----740661
Q gi|254780438|r 85 NLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG---NGNEHSLQA-A----KLTGAD 156 (261)
Q Consensus 85 ~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp---d~~q~~i~~-a----~~~Gad 156 (261)
.|+..+.|.-|++=|-- +.-...|+. -...|.++++.+++.|+.| |.|. |.- .++++ | ..+++|
T Consensus 108 ~iIda~~~~v~~~Kp~~--affe~~G~~---G~~~L~~ii~~lk~~g~~V--flD~KrgDIg-nTv~~yA~a~~~~~~aD 179 (342)
T 3bpw_A 108 YIINETNKYALTFKMNF--AFYIPYGSV---GIDVLKNVFDYLYELNIPT--ILDMKINDIG-NTVKNYRKFIFEYLKSD 179 (342)
T ss_dssp HHHHHHGGGCSEEEEEG--GGGSTTSHH---HHHHHHHHHHHHHHHTCCE--EEEEEECCCH-HHHHHHHHHHHTTSCCS
T ss_pred HHHHHHCCCCCEEECCH--HHHHHHHHH---HHHHHHHHHHHHHHCCCCE--EEEECCCCCH-HHHHHHHHHHHHCCCCC
T ss_conf 99997025032992609--999981699---9999999999998779958--9871115846-89999999976404787
Q ss_pred EEEECC
Q ss_conf 465112
Q gi|254780438|r 157 CIELYT 162 (261)
Q Consensus 157 ~VElhT 162 (261)
.|-+|.
T Consensus 180 avTVhp 185 (342)
T 3bpw_A 180 SCTVNI 185 (342)
T ss_dssp EEEECC
T ss_pred EEEECC
T ss_conf 899758
No 197
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=24.61 E-value=31 Score=14.72 Aligned_cols=26 Identities=27% Similarity=0.089 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHCCCCEEE--EECCCCC
Q ss_conf 9989999999974998999--8247883
Q gi|254780438|r 24 PNLVHIGKIALQSGASGLT--VHPRPDQ 49 (261)
Q Consensus 24 P~~~~~a~~~~~~GadgIT--vH~R~Dr 49 (261)
.|=+++-+.|++.|||+|= |++=-|.
T Consensus 14 ~NTl~af~~ai~~Gad~iE~DV~~TkDg 41 (285)
T 1xx1_A 14 VNAVAQIPDFLDLGANALEADVTFKGSV 41 (285)
T ss_dssp CCSTTHHHHHHHHTCSEEEEEEEEETTE
T ss_pred HHHHHHHHHHHHCCCCEEEEEEEEECCC
T ss_conf 2289999999985939999998285899
No 198
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas, ligand, substrate; 1.60A {Thermoanaerobacteriumthermosulfurigenes} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=24.17 E-value=29 Score=14.93 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=18.0
Q ss_pred CCCCCCCHH---------HHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 335782213---------3378899999862026963899
Q gi|254780438|r 106 TSDHGWDFL---------QNQALLTKTVARLHNLGSRISL 136 (261)
Q Consensus 106 TTegGldv~---------~~~~~L~~~i~~l~~~girvSL 136 (261)
++.||.++. ...+.|+..|+.+|+.||+|=|
T Consensus 96 ~~yhGY~~~dy~~vd~~~Gt~~dfk~LV~~aH~~GI~Vil 135 (683)
T 3bmv_A 96 TSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVII 135 (683)
T ss_dssp CSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 6678857224687471459999999999999988998999
No 199
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=24.08 E-value=35 Score=14.34 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=12.6
Q ss_pred HHHHHHHHHHCCCCCEEEEEE
Q ss_conf 889999986202696389972
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFI 138 (261)
+.|+..|+.+|+.||+|=|=+
T Consensus 242 ~dfk~LV~~aH~~GI~VIlDv 262 (657)
T 2wsk_A 242 DEFRDAIKALHKAGIEVILDI 262 (657)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEE
T ss_conf 999999999985588799978
No 200
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis}
Probab=23.97 E-value=35 Score=14.32 Aligned_cols=25 Identities=20% Similarity=0.061 Sum_probs=19.6
Q ss_pred CCC-CHHHHHHHHHHCCCCEEEEECC
Q ss_conf 689-9899999999749989998247
Q gi|254780438|r 22 PWP-NLVHIGKIALQSGASGLTVHPR 46 (261)
Q Consensus 22 ~~P-~~~~~a~~~~~~GadgITvH~R 46 (261)
.+| |=+.+-..|.+.||++|=+-.|
T Consensus 18 ~~pENT~~a~~~a~~~G~~~iE~Dv~ 43 (238)
T 3no3_A 18 GSAQNSIRSLERASEIGAYGSEFDVH 43 (238)
T ss_dssp TCCTTSHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEEEE
T ss_conf 99730399999999849899998767
No 201
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=23.91 E-value=35 Score=14.31 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=31.7
Q ss_pred HHHHHHHHH--CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC---------------
Q ss_conf 899999850--721289710165553335782213337889999986202696389972544441---------------
Q gi|254780438|r 82 TFLNLCERY--KPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNE--------------- 144 (261)
Q Consensus 82 e~i~ia~~i--kP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q--------------- 144 (261)
+|-...... +...+.||| |=|.|-- +|...++...+ ...-+-||+|+.| .|
T Consensus 9 el~~~~~~~~~~g~~Ig~VP-------TMGaLH~-GHlsLI~~A~~--~~d~vvVSIFVNP--~QF~~~eD~~~YPr~~e 76 (280)
T 2ejc_A 9 EMKKFSEEMREKKKTIGFVP-------TMGYLHE-GHLSLVRRARA--ENDVVVVSIFVNP--TQFGPNEDYERYPRDFE 76 (280)
T ss_dssp HHHHHHHHHHHTTCCEEEEE-------ECSCCCH-HHHHHHHHHHH--HSSEEEEEECCCG--GGCCTTSCGGGSCCCHH
T ss_pred HHHHHHHHHHHCCCEEEEEC-------CCCCHHH-HHHHHHHHHHH--HCCCEEEEEECCC--CCCCCCCCCCCCCCCHH
T ss_conf 99999999996499699983-------8730659-99999999986--3893899993575--43567631137998858
Q ss_pred HHHHHHHHCCCCEE
Q ss_conf 47999974066146
Q gi|254780438|r 145 HSLQAAKLTGADCI 158 (261)
Q Consensus 145 ~~i~~a~~~Gad~V 158 (261)
.+++.+.+.|+|.|
T Consensus 77 ~D~~~l~~~gvD~v 90 (280)
T 2ejc_A 77 RDRKLLEKENVDCI 90 (280)
T ss_dssp HHHHHHHTTTCSEE
T ss_pred HHHHHHHHCCCCEE
T ss_conf 88999997599799
No 202
>2zru_A Isopentenyl-diphosphate delta-isomerase; type 2, IDI, FMN, isopentenyl diphosphate isomerase, cytoplasm, flavoprotein, isoprene biosynthesis; HET: FMN; 2.00A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A*
Probab=23.90 E-value=35 Score=14.31 Aligned_cols=168 Identities=13% Similarity=0.075 Sum_probs=79.4
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEECCCC-CCHHHHHHHHCCCCEEE
Q ss_conf 899999850721289710165553335782213337889999986202-6963899725444-41479999740661465
Q gi|254780438|r 82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHN-LGSRISLFADGNG-NEHSLQAAKLTGADCIE 159 (261)
Q Consensus 82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~-~girvSLFIDpd~-~q~~i~~a~~~Gad~VE 159 (261)
+..........+...+-....++.+...|.... .....+.++.+++ .+..+.+..-+.. .......+.+.|+|.|-
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~l~~~~~~pvivK~i~~~~~~e~a~~~~~~Gad~I~ 216 (368)
T 2zru_A 139 EFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEY--QIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFD 216 (368)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBC--BTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEE
T ss_pred HHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCEEE
T ss_conf 997411323210344233001121124677754--202599999999875998479862677439999999981899799
Q ss_pred E--CCCCCHHHHHHHH----------------H-HHHHHHHHHHHHHHHHHCCCEEEECCCCC-HHHHHHHHHHCCCCEE
Q ss_conf 1--1211102444356----------------4-33666889998766541562352078989-8779999973699638
Q gi|254780438|r 160 L--YTGPYGACYNNPQ----------------Q-ERIFLNKLAITAQLAQKMDLQINAGHDLT-IQNIPNLINAIPYISE 219 (261)
Q Consensus 160 l--hTG~Ya~a~~~~~----------------~-~~~el~~i~~aa~~A~~lgL~VnAGHgLn-~~Nl~~~i~~Ip~I~E 219 (261)
+ |-|.-........ . ....+..+.++..... ++.|=|-=|.- -.-+.+.++ +. -+-
T Consensus 217 Vsn~gG~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~~~--~vpVIadGGIr~g~DV~KALa-LG-Ada 292 (368)
T 2zru_A 217 TSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP--DSFLVGSGGIRSGLDAAKAIA-LG-ADI 292 (368)
T ss_dssp CCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHCT--TCEEEEESSCCSHHHHHHHHH-HT-CSE
T ss_pred EEECCCCCCCCHHHHHHCCCCCCHHHHCHHHCCCCHHHHHHHHHHHHHCC--CCEEEEECCCCCHHHHHHHHH-CC-CCC
T ss_conf 98468876441445540135640121000120224789999999998537--975997189888899999998-39-995
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 84259999999994099999999999974105655403
Q gi|254780438|r 220 ISVGHAFAATALECGVKEAVFCFRRACGQHLDNTMRLT 257 (261)
Q Consensus 220 vsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~~~~~~~ 257 (261)
|.||-++.. ++..| ++.|.++++++.+-.+.+|..+
T Consensus 293 V~iGr~~l~-a~~~G-~~gv~~~l~~l~~El~~~M~~~ 328 (368)
T 2zru_A 293 AGMALPVLK-SAIEG-KESLEQFFRKIIFELKAAMMLT 328 (368)
T ss_dssp EEECHHHHH-HHHHC-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HHCCC-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 230799999-86007-9999999999999999999985
No 203
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=23.85 E-value=35 Score=14.31 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=47.9
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 97101655533357822133378899999862026963899725444414799997406614651121110244435643
Q gi|254780438|r 96 TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQE 175 (261)
Q Consensus 96 tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~ 175 (261)
.++|-.|.. ++=.|..+-... ..+...=--+.+|+-|......++.+.+.|+..+=+..|.+..
T Consensus 43 ~V~pVnP~~-~~I~G~~~y~sl-------~dip~~iDlvvi~~p~~~~~~il~e~~~~g~k~v~~q~G~~~~-------- 106 (138)
T 1y81_A 43 EVLPVNPNY-DEIEGLKCYRSV-------RELPKDVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQPGAESE-------- 106 (138)
T ss_dssp EEEEECTTC-SEETTEECBSSG-------GGSCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECTTSCCH--------
T ss_pred EEEEECCCC-CEECCEECCCCC-------CCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCHHHH--------
T ss_conf 899988998-488352544420-------1278753079998178887999999975699978960764419--------
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 36668899987665415623520
Q gi|254780438|r 176 RIFLNKLAITAQLAQKMDLQINA 198 (261)
Q Consensus 176 ~~el~~i~~aa~~A~~lgL~VnA 198 (261)
++.++|.+.|+.+--
T Consensus 107 --------e~~~~a~~~Gi~vig 121 (138)
T 1y81_A 107 --------EIRRFLEKAGVEYSF 121 (138)
T ss_dssp --------HHHHHHHHHTCEEEC
T ss_pred --------HHHHHHHHCCCEEEC
T ss_conf --------999999984998990
No 204
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=23.52 E-value=36 Score=14.26 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHCC--CCCEEEEEECCCCCCHHHHHHHHCCCCEEEECC
Q ss_conf 37889999986202--696389972544441479999740661465112
Q gi|254780438|r 116 NQALLTKTVARLHN--LGSRISLFADGNGNEHSLQAAKLTGADCIELYT 162 (261)
Q Consensus 116 ~~~~L~~~i~~l~~--~girvSLFIDpd~~q~~i~~a~~~Gad~VElhT 162 (261)
...++.+.+...+. .|.|+.+|.+|+..-..+++..++|.+.|...|
T Consensus 318 e~~~~~~~l~~~~~~L~GKrv~i~~~~~~~~~l~~~l~elGmevv~~g~ 366 (533)
T 1mio_A 318 EIAAIQDDLDYFKEKLQGKTACLYVGGSRSHTYMNMLKSFGVDSLVAGF 366 (533)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEESSSHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 9999999999999975797499976726789999999986996999743
No 205
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=23.26 E-value=36 Score=14.23 Aligned_cols=132 Identities=17% Similarity=0.230 Sum_probs=75.7
Q ss_pred CCHHHHHHHHC----CCCCCCC---------HHHHHHHHHHCCCCEEEEEC--CCCCCCCCHHHHHHHHHHHCCCCCCCE
Q ss_conf 21443223220----7886899---------89999999974998999824--788334888999998874000136741
Q gi|254780438|r 8 NLNAVAVLRNR----RNLPWPN---------LVHIGKIALQSGASGLTVHP--RPDQRHIRYTDLPEIRRLIDEQFPKAE 72 (261)
Q Consensus 8 NidhiAtLRna----Rg~~~P~---------~~~~a~~~~~~GadgITvH~--R~DrRHI~~~Dv~~l~~~~~~~~~~~e 72 (261)
|++|+=++|+. -|-.+|= --+.|.-+-++|.-|.--.. +||+ ..+-+..+++..... .-
T Consensus 8 ~~~~~m~~~T~lt~~lgi~~PIi~apM~~vs~~~La~AVs~AGglG~l~~~~~~~e~---l~~~i~~~~~~~~~~---~~ 81 (326)
T 3bo9_A 8 HHHHHMTVRTRVTDLLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDD---LRKAISELRQKTDKP---FG 81 (326)
T ss_dssp ----CCCCCCHHHHHHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHH---HHHHHHHHHTTCSSC---EE
T ss_pred CCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHH---HHHHHHHHHHHCCCC---CC
T ss_conf 433530367576897499958885897888769999999818987575677899999---999999998744788---77
Q ss_pred EEEEE--CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 58883--4856899999850721289710165553335782213337889999986202696389972544441479999
Q gi|254780438|r 73 LNIEG--YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAA 150 (261)
Q Consensus 73 lNiEg--~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a 150 (261)
.|+-. ...++.++.+++.+|..+.+- +++. .++++.+++.|+.+-..+- ++ ..-..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----------~g~p-------~~~i~~~~~~gi~v~~~v~-s~--~~A~~a 140 (326)
T 3bo9_A 82 VNIILVSPWADDLVKVCIEEKVPVVTFG-----------AGNP-------TKYIRELKENGTKVIPVVA-SD--SLARMV 140 (326)
T ss_dssp EEEETTSTTHHHHHHHHHHTTCSEEEEE-----------SSCC-------HHHHHHHHHTTCEEEEEES-SH--HHHHHH
T ss_pred CCEEECCCCHHHHHHHHHHCCCCEEEEC-----------CCCC-------HHHHHHHHHCCCEEEEECC-CH--HHHHHH
T ss_conf 5401026235899999984695999988-----------9990-------9999999746988999559-99--999999
Q ss_pred HHCCCCEEEECCCCCHH
Q ss_conf 74066146511211102
Q gi|254780438|r 151 KLTGADCIELYTGPYGA 167 (261)
Q Consensus 151 ~~~Gad~VElhTG~Ya~ 167 (261)
.+.|+|.|-. .|+-|-
T Consensus 141 ~~~g~D~lV~-qG~eAG 156 (326)
T 3bo9_A 141 ERAGADAVIA-EGMESG 156 (326)
T ss_dssp HHTTCSCEEE-ECTTSS
T ss_pred HHCCCCEEEE-ECCCCC
T ss_conf 8728988996-368766
No 206
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=23.18 E-value=36 Score=14.22 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=49.7
Q ss_pred HHHHHCCCCEEEEEC-----C--CCCCCCCHHHHHHHHHHHCC---CCCCCEEEEEECCC------------------HH
Q ss_conf 999974998999824-----7--88334888999998874000---13674158883485------------------68
Q gi|254780438|r 31 KIALQSGASGLTVHP-----R--PDQRHIRYTDLPEIRRLIDE---QFPKAELNIEGYPN------------------ET 82 (261)
Q Consensus 31 ~~~~~~GadgITvH~-----R--~DrRHI~~~Dv~~l~~~~~~---~~~~~elNiEg~p~------------------~e 82 (261)
....++|.+.|-+-. . +..-+..+..+..|..++.. +--.+-+++-..|. +.
T Consensus 35 ~~i~~~G~n~vRipi~~~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~gi~vildlH~~p~~~~~~~~~~~~~~~~~~~~~ 114 (343)
T 1ceo_A 35 ETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQDFKTSTLFEDPNQQKR 114 (343)
T ss_dssp HHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--------CCTTTCHHHHHH
T ss_pred HHHHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99998799889945579992278888745889999999999999976997999834687655665666433577589999
Q ss_pred HH----HHHHHHCC--CEE--EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 99----99985072--128--971016555333578221333788999998620269638997254
Q gi|254780438|r 83 FL----NLCERYKP--EQI--TLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 83 ~i----~ia~~ikP--~qv--tLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDp 140 (261)
++ .++.+++. ..+ .|.=|... -+...-.+.....+..+++.+-..-+++.+
T Consensus 115 ~~~~~~~la~ry~~~~~v~~~el~NEP~~-------~~~~~~~~~~~~~~~aIR~~dp~~~I~v~g 173 (343)
T 1ceo_A 115 FVDIWRFLAKRYINEREHIAFELLNQVVE-------PDSTRWNKLMLECIKAIREIDSTMWLYIGG 173 (343)
T ss_dssp HHHHHHHHHHHTTTCCSSEEEECCSCCCC-------SSSHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCC-------CHHHHHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 99999999998579986899841446487-------267899999999999999649997699647
No 207
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus}
Probab=23.07 E-value=30 Score=14.82 Aligned_cols=61 Identities=18% Similarity=0.146 Sum_probs=35.5
Q ss_pred EEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH-HHHHHHHHHHH------------HHHHHHCCCEEEE
Q ss_conf 972544441479999740661465112111024443564-33666889998------------7665415623520
Q gi|254780438|r 136 LFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ-ERIFLNKLAIT------------AQLAQKMDLQINA 198 (261)
Q Consensus 136 LFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~-~~~el~~i~~a------------a~~A~~lgL~VnA 198 (261)
-.-||+..+...+.|+++|.+. -++.|.|+-. ..+.. -..|...++.. +..|+++||.+-+
T Consensus 161 ~~yd~~L~~~~~~~a~~~~~~~-~~~~GvY~~~-~GP~fET~AEir~~r~~GaDvVGMS~vPEa~lArelg~~~a~ 234 (285)
T 3khs_A 161 SVYDKTLRKYAISAARELGMSY-ATHEGVYCCV-NGPSFETPAECKILRLMGSDAVGMSTAPETIVAKHGGMRCLA 234 (285)
T ss_dssp TCBCHHHHHHHHHHHHHHTCGG-GEEEEEEEEC-CCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHCCCCC-CCCCCEEEEE-ECCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCEEE
T ss_conf 3528999999999999849962-1155079996-789766588889999719868532644899999987998699
No 208
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=23.07 E-value=29 Score=14.87 Aligned_cols=14 Identities=36% Similarity=0.458 Sum_probs=6.3
Q ss_pred HHHHCCCC--EEEECC
Q ss_conf 99740661--465112
Q gi|254780438|r 149 AAKLTGAD--CIELYT 162 (261)
Q Consensus 149 ~a~~~Gad--~VElhT 162 (261)
+|..+||+ .||-|-
T Consensus 230 AAva~GA~g~~IEkH~ 245 (276)
T 1vs1_A 230 AGLAAGADGLIVEVHP 245 (276)
T ss_dssp HHHHTTCSEEEEEBCS
T ss_pred HHHHHCCCEEEEEECC
T ss_conf 9999399979999598
No 209
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 1loq_A* 1lor_A* 1kly_A* 3lhz_A* 3m44_A 3lhw_A* ...
Probab=22.95 E-value=37 Score=14.19 Aligned_cols=71 Identities=24% Similarity=0.258 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEEC------CCCCCHHHHHHH
Q ss_conf 856899999850721289710165553335782213337889999986202-6963899725------444414799997
Q gi|254780438|r 79 PNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHN-LGSRISLFAD------GNGNEHSLQAAK 151 (261)
Q Consensus 79 p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~-~girvSLFID------pd~~q~~i~~a~ 151 (261)
-.++.++++.++.|.-+.+=.- -++-...|+.. ++.|++ .+.. +|.| |+...+.++.+.
T Consensus 23 ~~~~al~i~~~l~~~v~~iKiG--~~l~~~~G~~~----------i~~l~~~~~~~--if~D~K~~DIp~T~~~~~~~~~ 88 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIG--YPLVLSEGMDI----------IAEFRKRFGCR--IIADFKVADIPETNEKICRATF 88 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEE--HHHHHHHCTHH----------HHHHHHHHCCE--EEEEEEECSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEC--HHHHHHCCHHH----------HHHHHHHCCCC--EEEEEEECCHHHHHHHHHHHHH
T ss_conf 9999999999847857499988--99996339899----------99999768982--9996010007779999999998
Q ss_pred HCCCCEEEECCC
Q ss_conf 406614651121
Q gi|254780438|r 152 LTGADCIELYTG 163 (261)
Q Consensus 152 ~~Gad~VElhTG 163 (261)
+.|+|.+-+|.-
T Consensus 89 ~~gad~~TVh~~ 100 (228)
T 3m47_A 89 KAGADAIIVHGF 100 (228)
T ss_dssp HTTCSEEEEEST
T ss_pred HCCCCEEEEECC
T ss_conf 559989999667
No 210
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=22.76 E-value=37 Score=14.16 Aligned_cols=176 Identities=16% Similarity=0.162 Sum_probs=103.5
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE--------EEEECCCHHHHHHHHHHCCCEEE
Q ss_conf 9899999999749989998247883348889999988740001367415--------88834856899999850721289
Q gi|254780438|r 25 NLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL--------NIEGYPNETFLNLCERYKPEQIT 96 (261)
Q Consensus 25 ~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el--------NiEg~p~~e~i~ia~~ikP~qvt 96 (261)
.+.+.|.-+.++|+.|+.... .+++..+++.+.. +...+ .+-..++.++........-+.+.
T Consensus 24 ~~~~~A~a~~~~Ga~~v~~~~--------~~~~~~vr~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agad~i~ 93 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRANT--------KEDILAIKETVDL--PVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIA 93 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEES--------HHHHHHHHHHCCS--CEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHCCCEEEECCC--------HHHHHHHHHHCCC--CEEEEEECCCCCCHHCCCCHHHHHHHHHHCCCCEEE
T ss_conf 999999999988996996589--------7889999985488--645566316678223026029999999987999999
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER 176 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~ 176 (261)
+ |......+ ...+..+++.....+..+-++.++... .....+.+.|+|.|-...+.+...........
T Consensus 94 i-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~t~-~~a~~~~~~g~d~i~~~~~~~~~~~~~~~~~~ 161 (223)
T 1y0e_A 94 L-DATLQQRP----------KETLDELVSYIRTHAPNVEIMADIATV-EEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ 161 (223)
T ss_dssp E-ECSCSCCS----------SSCHHHHHHHHHHHCTTSEEEEECSSH-HHHHHHHHTTCSEEECTTTTSSTTSTTCCTTH
T ss_pred E-ECCCCCCH----------HHHHHHHHHHHHHHCCCCEEECCCCCH-HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCH
T ss_conf 7-54567881----------657999999988737871575487999-99999997599969976778853356887655
Q ss_pred HHHHHHHHHHHHHHHCCCEEEECCCC-CHHHHHHHHHHCCCCEEEEEHHHHH
Q ss_conf 66688999876654156235207898-9877999997369963884259999
Q gi|254780438|r 177 IFLNKLAITAQLAQKMDLQINAGHDL-TIQNIPNLINAIPYISEISVGHAFA 227 (261)
Q Consensus 177 ~el~~i~~aa~~A~~lgL~VnAGHgL-n~~Nl~~~i~~Ip~I~EvsIGHaiI 227 (261)
..++.+ .+......+-|=|+=|. +-+.+...++ . +-+=|-+|-||.
T Consensus 162 ~~~~~v---~~~~~~~~iPvia~GGI~t~ed~~~al~-~-GAdgV~vGsAi~ 208 (223)
T 1y0e_A 162 NDFQFL---KDVLQSVDAKVIAEGNVITPDMYKRVMD-L-GVHCSVVGGAIT 208 (223)
T ss_dssp HHHHHH---HHHHHHCCSEEEEESSCCSHHHHHHHHH-T-TCSEEEECHHHH
T ss_pred HHHHHH---HHHHHCCCCCEEEECCCCCHHHHHHHHH-C-CCCEEEECHHHC
T ss_conf 479999---9998428997898689899999999998-6-999999842117
No 211
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis, hydrolase; 1.91A {Thermoanaerobacter tengcongensis MB4}
Probab=22.50 E-value=37 Score=14.18 Aligned_cols=23 Identities=30% Similarity=0.393 Sum_probs=18.1
Q ss_pred CCCC-CHHHHHHHHHHCCCCEEEE
Q ss_conf 8689-9899999999749989998
Q gi|254780438|r 21 LPWP-NLVHIGKIALQSGASGLTV 43 (261)
Q Consensus 21 ~~~P-~~~~~a~~~~~~GadgITv 43 (261)
+.+| |=+.+-..|.+.||++|=+
T Consensus 22 ~~~pENTl~af~~a~~~Ga~~iE~ 45 (252)
T 2pz0_A 22 KNVPENTIAAFKRAMELGADGIEL 45 (252)
T ss_dssp TTSCTTSHHHHHHHHHHTCSEEEE
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 899720799999999859798998
No 212
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=22.42 E-value=38 Score=14.12 Aligned_cols=59 Identities=22% Similarity=0.250 Sum_probs=30.7
Q ss_pred HHHHHHHHCCCEEEEEECCC---------CCCCCCCCCCHH----------------HHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99999850721289710165---------553335782213----------------33788999998620269638997
Q gi|254780438|r 83 FLNLCERYKPEQITLVPDDP---------HQLTSDHGWDFL----------------QNQALLTKTVARLHNLGSRISLF 137 (261)
Q Consensus 83 ~i~ia~~ikP~qvtLVPe~r---------~elTTegGldv~----------------~~~~~L~~~i~~l~~~girvSLF 137 (261)
.++...+.-=+.|=|-|--. .-.+.-+|.|.. +..+.++..|+.+|+.||+|=|=
T Consensus 207 ~ldYLk~LGvtaI~L~Pv~~~~~~~~~~~~~~~~ywGYdp~~y~a~~~~y~~~~~~~Gt~~dfk~LV~~aH~~GI~VIlD 286 (718)
T 2vr5_A 207 MISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIID 286 (718)
T ss_dssp HHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 34728776976799778733587666666787776562523466644334367888989999999999998779999971
Q ss_pred ECCC
Q ss_conf 2544
Q gi|254780438|r 138 ADGN 141 (261)
Q Consensus 138 IDpd 141 (261)
+=++
T Consensus 287 vV~N 290 (718)
T 2vr5_A 287 VVYN 290 (718)
T ss_dssp ECCS
T ss_pred CCCC
T ss_conf 3314
No 213
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=22.42 E-value=38 Score=14.12 Aligned_cols=74 Identities=19% Similarity=0.289 Sum_probs=53.1
Q ss_pred EEEE-CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 8883-485689999985072128971016555333578221333788999998620269638997254444147999974
Q gi|254780438|r 74 NIEG-YPNETFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL 152 (261)
Q Consensus 74 NiEg-~p~~e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~ 152 (261)
+|=- -|.+.|++-+.+.+|+.++|- ||- ......++.+++.|++.|+++-+.|--.+-- .--.+.+
T Consensus 131 dLG~~v~~~~~v~~~~~~~~d~iglS-----------~ll-t~s~~~m~~~~~~l~~~g~~~~v~vGGa~~t-~~~~a~k 197 (579)
T 3bul_A 131 DLGVMVPAEKILRTAKEVNADLIGLS-----------GLI-TPSLDEMVNVAKEMERQGFTIPLLIGGATTS-KAHTAVK 197 (579)
T ss_dssp ECCSSBCHHHHHHHHHHHTCSEEEEE-----------CCS-THHHHHHHHHHHHHHHTTCCSCEEEESTTCC-HHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHCCCEEEEE-----------CCC-HHHHHHHHHHHHHHHHHCCCCCEEECCCCCC-HHHHHHH
T ss_conf 45778899999999998499789995-----------334-7779999999999997289871783264056-7887776
Q ss_pred CCCCEEEECCCC
Q ss_conf 066146511211
Q gi|254780438|r 153 TGADCIELYTGP 164 (261)
Q Consensus 153 ~Gad~VElhTG~ 164 (261)
+.. .|.|+
T Consensus 198 I~p----~Y~G~ 205 (579)
T 3bul_A 198 IEQ----NYSGP 205 (579)
T ss_dssp TGG----GCSSC
T ss_pred HCC----CCCCC
T ss_conf 425----77687
No 214
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=22.25 E-value=38 Score=14.10 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=35.6
Q ss_pred HHHHHHHHHHCCCCEEEEECC----CCCCCC-----C-HHHHHHHHHHHCCCCCCCEEEEEECCC----HHHHHHHHHHC
Q ss_conf 899999999749989998247----883348-----8-899999887400013674158883485----68999998507
Q gi|254780438|r 26 LVHIGKIALQSGASGLTVHPR----PDQRHI-----R-YTDLPEIRRLIDEQFPKAELNIEGYPN----ETFLNLCERYK 91 (261)
Q Consensus 26 ~~~~a~~~~~~GadgITvH~R----~DrRHI-----~-~~Dv~~l~~~~~~~~~~~elNiEg~p~----~e~i~ia~~ik 91 (261)
..+.++.++++|||.|.+.+- ++.|.. | ++-+.++.+.+++. .++|+=+-+.|+ .++...+.+..
T Consensus 650 ~~~la~~~e~~gaD~iElNiScPn~~~~r~~g~~~g~~p~~~~~i~~~Vr~~-~~iPv~vKLsP~~tdi~~ia~aa~~~G 728 (1025)
T 1gte_A 650 WMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKLTPNVTDIVSIARAAKEGG 728 (1025)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEECSCSSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 9999999875499989997999999884322310146999999999999757-899789982888162999999999849
Q ss_pred CCEEEE
Q ss_conf 212897
Q gi|254780438|r 92 PEQITL 97 (261)
Q Consensus 92 P~qvtL 97 (261)
-+-+++
T Consensus 729 adgv~~ 734 (1025)
T 1gte_A 729 ADGVTA 734 (1025)
T ss_dssp CSEEEE
T ss_pred CCEEEE
T ss_conf 989999
No 215
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, structural genomics, NPPSFA; 1.60A {Pyrococcus horikoshii OT3} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=22.24 E-value=38 Score=14.10 Aligned_cols=29 Identities=24% Similarity=0.272 Sum_probs=18.4
Q ss_pred CCCCH-HHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 68998-999999997499899982478833
Q gi|254780438|r 22 PWPNL-VHIGKIALQSGASGLTVHPRPDQR 50 (261)
Q Consensus 22 ~~P~~-~~~a~~~~~~GadgITvH~R~DrR 50 (261)
+-|+- ..++..+.++|||.+|||+.-.+.
T Consensus 62 Dig~t~~~~~~~~~~~gad~~Tvh~~~g~~ 91 (208)
T 2czd_A 62 DIPNTNRLIARKVFGAGADYVIVHTFVGRD 91 (208)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESTTCHH
T ss_pred CCCCHHHHHHHHHHHCCCCEEEEECCCCHH
T ss_conf 357509999999761699889974027878
No 216
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=21.87 E-value=32 Score=14.63 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=47.1
Q ss_pred ECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHH-HHHHHHHHHHH------------HHHHHHCCCEEEE------
Q ss_conf 2544441479999740661465112111024443564-33666889998------------7665415623520------
Q gi|254780438|r 138 ADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQ-ERIFLNKLAIT------------AQLAQKMDLQINA------ 198 (261)
Q Consensus 138 IDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~-~~~el~~i~~a------------a~~A~~lgL~VnA------ 198 (261)
-||+..+...+.|+++|. .++.|.|+-. ..+.. -..|...++.. +..|+++||.+-+
T Consensus 172 yd~~Lr~~~~~~a~~~g~---~~~~GvY~~~-~GP~fET~AEir~~r~lGaDvVGMS~vPEailArelgl~~~~is~VTN 247 (287)
T 3odg_A 172 YDKDLRADMAKIAQQLDI---PLTEGVFVSY-PGPCFETPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITN 247 (287)
T ss_dssp SCHHHHHHHHHHHHHHTC---CCEEEEEEEC-CCSSCCCHHHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHCCC---CEECCEEEEE-ECCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 049999999999998398---5006659994-579876489999999849988742849999999977998799999713
Q ss_pred -CCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -78989877999997369963884259999999994099999999999974105
Q gi|254780438|r 199 -GHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRRACGQHLD 251 (261)
Q Consensus 199 -GHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~ii~~~~~ 251 (261)
.-|+ .+-.+-|.-|-+ -.+++..++.+++.+-.+
T Consensus 248 ~aaG~---------------~~~~lsheeVl~----~~~~~~~~~~~li~~~I~ 282 (287)
T 3odg_A 248 LAEGL---------------SDVVLSHEQTLK----FAKVASVNFTKLIEAFLK 282 (287)
T ss_dssp ECTTS---------------SSCCCCHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred CCCCC---------------CCCCCCHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 33368---------------899889999999----999999999999999999
No 217
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=21.86 E-value=39 Score=14.05 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 37889999986202696389972
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFI 138 (261)
..+.|+..|+.+|+.||+|=|=+
T Consensus 73 t~~d~~~Lv~~~H~~Gi~VilD~ 95 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDA 95 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 99999999999864588899973
No 218
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=21.82 E-value=39 Score=14.04 Aligned_cols=122 Identities=10% Similarity=0.077 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC-------CCHHHHHHHHHHCCCE
Q ss_conf 689989999999974998999824788334888999998874000136741588834-------8568999998507212
Q gi|254780438|r 22 PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGY-------PNETFLNLCERYKPEQ 94 (261)
Q Consensus 22 ~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~-------p~~e~i~ia~~ikP~q 94 (261)
+..+.++.|+.++++|||+|-+.|..--.. .++++.+.-+-+.+. .+.++=+==. .+.+++....++ |..
T Consensus 81 s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~-~~~~i~~~f~~i~~~-~~~pi~iYn~P~~~~~~~~~~~l~~l~~~-~~i 157 (291)
T 3a5f_A 81 NTAASIAMSKWAESIGVDGLLVITPYYNKT-TQKGLVKHFKAVSDA-VSTPIIIYNVPGRTGLNITPGTLKELCED-KNI 157 (291)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHC-CTGGG-CCSCEEEEECHHHHSCCCCHHHHHHHTTS-TTE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCC-CHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCHHHHHHHHCC-CCC
T ss_conf 199999999999970899799818877889-999999999999851-37988999578745777778888888618-981
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC
Q ss_conf 89710165553335782213337889999986202696389972544441479999740661465112111
Q gi|254780438|r 95 ITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 95 vtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y 165 (261)
+-+. + +.+. .......+... +-+.++|...+.- +-.....|++..--.++.+
T Consensus 158 ~~~K-~------~~~~------~~~~~~~~~~~---~~~~~~~~G~~~~---~~~~l~~G~~G~~~~~~n~ 209 (291)
T 3a5f_A 158 VAVX-E------ASGN------ISQIAQIKALC---GDKLDIYSGNDDQ---IIPILALGGIGVISVLANV 209 (291)
T ss_dssp EEEE-E------CSCC------HHHHHHHHHHH---GGGSEEEESCGGG---HHHHHHTTCCEEEESGGGT
T ss_pred EEEE-E------CCCC------HHHHHHHHHHC---CCCCEEECCCHHH---HHHHHHCCCCEEECCCCCC
T ss_conf 1453-3------7899------79999999964---9981571682787---6347646998342042322
No 219
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=21.61 E-value=39 Score=14.01 Aligned_cols=31 Identities=6% Similarity=-0.006 Sum_probs=18.9
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 883348889999988740001367415888348
Q gi|254780438|r 47 PDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYP 79 (261)
Q Consensus 47 ~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p 79 (261)
.|-|.-+.+|+..|-+.+.+. ++.+-+.+-+
T Consensus 72 vd~~~Gt~~e~k~lV~~~H~~--Gi~VilDvV~ 102 (557)
T 1zja_A 72 VMKEYGTMEDFDRLMAELKKR--GMRLMVDVVI 102 (557)
T ss_dssp ECTTTCCHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHHC--CCEEEEEECC
T ss_conf 471239999999999999988--8989999784
No 220
>2p22_D Hypothetical 12.0 kDa protein in ADE3-Ser2 intergenic region; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae}
Probab=21.54 E-value=21 Score=15.93 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=7.6
Q ss_pred HHHHCCCCCCCC
Q ss_conf 232207886899
Q gi|254780438|r 14 VLRNRRNLPWPN 25 (261)
Q Consensus 14 tLRnaRg~~~P~ 25 (261)
-||||+|.++|.
T Consensus 11 PL~Na~g~~~P~ 22 (79)
T 2p22_D 11 PLYNKYGKDFPQ 22 (79)
T ss_dssp CCEESSSTTSCC
T ss_pred CCHHHHCCCCCH
T ss_conf 640210220620
No 221
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=21.23 E-value=40 Score=13.96 Aligned_cols=34 Identities=6% Similarity=0.072 Sum_probs=18.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 5782213337889999986202696389972544
Q gi|254780438|r 108 DHGWDFLQNQALLTKTVARLHNLGSRISLFADGN 141 (261)
Q Consensus 108 egGldv~~~~~~L~~~i~~l~~~girvSLFIDpd 141 (261)
...|+...-......++..+++.+-..-+|++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~aIR~~dp~~~i~~~~~ 265 (481)
T 2osx_A 232 GPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQ 265 (481)
T ss_dssp THHHHTTHHHHHHHHHHHHHTTTCSSSEEEECCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 8863222478999999999987388854998255
No 222
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=21.06 E-value=40 Score=13.94 Aligned_cols=95 Identities=15% Similarity=0.194 Sum_probs=47.0
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCC-HHHHH----------HH-----HHHHHHHHH
Q ss_conf 889999986202696389972544441479999740661465112111-02444----------35-----643366688
Q gi|254780438|r 118 ALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPY-GACYN----------NP-----QQERIFLNK 181 (261)
Q Consensus 118 ~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Y-a~a~~----------~~-----~~~~~el~~ 181 (261)
..++++++.+++.+....+++--+.. ..++..+++|+|++-+....= ..+.. ++ ..+.+ .+.
T Consensus 217 p~~~~i~~~~~~~~~~~~ih~~~~~~-~~~~~~~~~~~d~~s~d~~~dl~~a~~~~~~~l~GNldP~~l~~~~e~i-~~~ 294 (338)
T 2eja_A 217 PYVNYLISELKDFSDTPVIYFFRGSS-SFIDLAVDYRADALSVDWSVDIPELFKIYDKGFQGNLEPAVLYASEEVI-EEK 294 (338)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESSHH-HHHHHHTTSCCSEEECCTTSCHHHHHHHCCSEEECCBCGGGGGSCHHHH-HHH
T ss_pred CHHHHHHHHHHHCCCCCEEEECCCCH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHCCCHHHH-HHH
T ss_conf 36999999997437996487237602-3444430267663045666899999985899548489827876999999-999
Q ss_pred HHHHHHH-HHHCCCEEEECCCCC----HHHHHHHHHHC
Q ss_conf 9998766-541562352078989----87799999736
Q gi|254780438|r 182 LAITAQL-AQKMDLQINAGHDLT----IQNIPNLINAI 214 (261)
Q Consensus 182 i~~aa~~-A~~lgL~VnAGHgLn----~~Nl~~~i~~I 214 (261)
..++.+. ...-|.-+|-|||+. .+|+..++..+
T Consensus 295 ~~~~l~~~~~~~g~I~~~Gcgi~p~tp~env~a~v~av 332 (338)
T 2eja_A 295 TLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLV 332 (338)
T ss_dssp HHHHHTTCCCSSSEEBCBSSCCCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999966999997997999759899999999999999
No 223
>2fe7_A Probable N-acetyltransferase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=20.98 E-value=40 Score=13.93 Aligned_cols=106 Identities=11% Similarity=-0.015 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHHHHCCC--CCCCEEEEEECCCH-HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHH-HHHHHHHHHH
Q ss_conf 348889999988740001--36741588834856-8999998507212897101655533357822133-3788999998
Q gi|254780438|r 50 RHIRYTDLPEIRRLIDEQ--FPKAELNIEGYPNE-TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQ-NQALLTKTVA 125 (261)
Q Consensus 50 RHI~~~Dv~~l~~~~~~~--~~~~elNiEg~p~~-e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~-~~~~L~~~i~ 125 (261)
|.++.+|+..|.+++... +.+.+-.. .+++ .+..-...-.|...++|-+..+++- |+-... .....
T Consensus 14 R~a~~~D~~~i~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~iv---G~~~~~~~~~~~----- 83 (166)
T 2fe7_A 14 RPAVPADAEQILAFIIELADYERARHEV--VTDVEGIRRSLFAEGSPTRALMCLSEGRPI---GYAVFFYSYSTW----- 83 (166)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTCGGGC--CCCHHHHHHHHTSTTCSEEEEEEEETTEEE---EEEEEEEEEETT-----
T ss_pred EECCHHHHHHHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHCCCCCCEEEEEEEECCEEE---EEEEEECCCCCC-----
T ss_conf 6899999999999999999873576643--389999998643668861999999999999---999841235533-----
Q ss_pred HHCCCCCEEEEEECCCCCC---------HHHHHHHHCCCCEEEECCCCC
Q ss_conf 6202696389972544441---------479999740661465112111
Q gi|254780438|r 126 RLHNLGSRISLFADGNGNE---------HSLQAAKLTGADCIELYTGPY 165 (261)
Q Consensus 126 ~l~~~girvSLFIDpd~~q---------~~i~~a~~~Gad~VElhTG~Y 165 (261)
.-.....-.++||+|+--. ..++.|++.|+.+|.+.|.+.
T Consensus 84 ~~~~~~~i~~l~V~~~~rg~GiG~~L~~~~~~~a~~~g~~~i~l~v~~~ 132 (166)
T 2fe7_A 84 LGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAVANDCGRLEWSVLDW 132 (166)
T ss_dssp TTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 4687278735741400016699999999999999966898799999598
No 224
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=20.81 E-value=41 Score=13.90 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=10.7
Q ss_pred HHHHHHCCCCEEEE
Q ss_conf 99997406614651
Q gi|254780438|r 147 LQAAKLTGADCIEL 160 (261)
Q Consensus 147 i~~a~~~Gad~VEl 160 (261)
|++.+++|++.|+|
T Consensus 475 LdYLk~LGvt~I~L 488 (921)
T 2wan_A 475 IDSLKELGITTVQL 488 (921)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHCCCCEEEE
T ss_conf 07998549878997
No 225
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=20.62 E-value=37 Score=14.15 Aligned_cols=23 Identities=13% Similarity=0.066 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 37889999986202696389972
Q gi|254780438|r 116 NQALLTKTVARLHNLGSRISLFA 138 (261)
Q Consensus 116 ~~~~L~~~i~~l~~~girvSLFI 138 (261)
..+.|+..|+.+|+.||+|=|=+
T Consensus 114 t~~dfk~LV~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 114 TIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 99999999999998899999997
No 226
>1v1h_A Fibritin, fiber protein; chimera; 1.9A {Human adenovirus type 2} SCOP: b.83.1.1 h.1.17.1 PDB: 1v1i_A
Probab=20.58 E-value=13 Score=17.42 Aligned_cols=14 Identities=21% Similarity=0.399 Sum_probs=7.4
Q ss_pred CCEEEECCCCCHHH
Q ss_conf 62352078989877
Q gi|254780438|r 193 DLQINAGHDLTIQN 206 (261)
Q Consensus 193 gL~VnAGHgLn~~N 206 (261)
++.|+.|+||.|++
T Consensus 54 ~i~vkLG~GL~FD~ 67 (103)
T 1v1h_A 54 AMITKLGAGLSFDN 67 (103)
T ss_dssp CEEECBCTTCEECT
T ss_pred CEEEECCCCCEECC
T ss_conf 67883047831468
No 227
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=20.49 E-value=41 Score=13.86 Aligned_cols=168 Identities=11% Similarity=-0.009 Sum_probs=81.5
Q ss_pred HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEE------EEEE---CC---CHHHHHHHHHHCCCEEE
Q ss_conf 999999749989998247883348889999988740001367415------8883---48---56899999850721289
Q gi|254780438|r 29 IGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAEL------NIEG---YP---NETFLNLCERYKPEQIT 96 (261)
Q Consensus 29 ~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~el------NiEg---~p---~~e~i~ia~~ikP~qvt 96 (261)
+...+-++|.|||-+.... .-.+.|...+++.+... ++++ .+.. .+ ....+++|...--..|.
T Consensus 28 ~l~~aa~~G~dgVEl~~~~---~~~~~~~~~~~~~l~~~--GL~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~lGa~~v~ 102 (264)
T 1yx1_A 28 FLPLLAMAGAQRVELREEL---FAGPPDTEALTAAIQLQ--GLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLK 102 (264)
T ss_dssp GHHHHHHHTCSEEEEEGGG---CSSCCCHHHHHHHHHHT--TCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHCCCEEEEECCC---CCCHHHHHHHHHHHHHC--CCEEEEECCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999998499989982434---78744399999999977--987999625111047632789999999999985979899
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH------HHHHHHHCCCCEE--EECCCCCHHH
Q ss_conf 7101655533357822133378899999862026963899725444414------7999974066146--5112111024
Q gi|254780438|r 97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEH------SLQAAKLTGADCI--ELYTGPYGAC 168 (261)
Q Consensus 97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~------~i~~a~~~Gad~V--ElhTG~Ya~a 168 (261)
+.|-...+- ..+..+.+.+++.|+++.+--.+..... .+....+.+.+.| .+=||.+...
T Consensus 103 ~~~g~~~~~------------~~l~~l~~~a~~~Gv~l~lEnh~~~~~~~~~~~~~~~~~~~~~~~~vg~~~D~~h~~~~ 170 (264)
T 1yx1_A 103 VSLGLLPEQ------------PDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFRLAERQQLDLAMTFDIGNWRWQ 170 (264)
T ss_dssp EEEECCCSS------------CCHHHHHHHHTTSSCEEEEECCSSHHHHCHHHHHHHHHHHHHTTCSEEEEEETTGGGGG
T ss_pred ECCCCCCCH------------HHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHC
T ss_conf 898884101------------13999999999739889996589846687889999999865269854004673888841
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-------CCEEEECCC-CCHHHHHHHHHHCCC
Q ss_conf 443564336668899987665415-------623520789-898779999973699
Q gi|254780438|r 169 YNNPQQERIFLNKLAITAQLAQKM-------DLQINAGHD-LTIQNIPNLINAIPY 216 (261)
Q Consensus 169 ~~~~~~~~~el~~i~~aa~~A~~l-------gL~VnAGHg-Ln~~Nl~~~i~~Ip~ 216 (261)
-.++. ..++.+..-..+.|-. |-.+..|.| .++..+..+++.+++
T Consensus 171 g~dp~---~~~~~l~~~i~~vHvKD~~~~~~~~~~~~g~g~~~~~~~~~~L~~~~~ 223 (264)
T 1yx1_A 171 EQAAD---EAALRLGRYVGYVHCKAVIRNRDGKLVAVPPSAADLQYWQRLLQHFPE 223 (264)
T ss_dssp TCCHH---HHHHHHGGGEEEEEECEEEECTTSCEEEECCCHHHHHHHHHHHTTSCT
T ss_pred CCCHH---HHHHHHCCCEEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCC
T ss_conf 88889---999972684799995657778888452589999999999999984799
No 228
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=20.09 E-value=42 Score=13.80 Aligned_cols=26 Identities=15% Similarity=0.031 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 33788999998620269638997254
Q gi|254780438|r 115 QNQALLTKTVARLHNLGSRISLFADG 140 (261)
Q Consensus 115 ~~~~~L~~~i~~l~~~girvSLFIDp 140 (261)
...+.++..|+.+++.||+|=|=+=+
T Consensus 95 Gt~~df~~lv~~~h~~Gi~VilD~V~ 120 (484)
T 2aaa_A 95 GTADNLKSLSDALHARGMYLMVDVVP 120 (484)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 99999999999996478689996435
No 229
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=20.00 E-value=42 Score=13.79 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=50.9
Q ss_pred HHHHHHHHHHCCCC----CEEEEEECCCCCCHHHHHHHHCCCCEEEECCC-CCHHHH---H----------------HHH
Q ss_conf 88999998620269----63899725444414799997406614651121-110244---4----------------356
Q gi|254780438|r 118 ALLTKTVARLHNLG----SRISLFADGNGNEHSLQAAKLTGADCIELYTG-PYGACY---N----------------NPQ 173 (261)
Q Consensus 118 ~~L~~~i~~l~~~g----irvSLFIDpd~~q~~i~~a~~~Gad~VElhTG-~Ya~a~---~----------------~~~ 173 (261)
..++++++.+++.+ +.+..|..-... .++...++|+|++.+... +...+. . .++
T Consensus 225 p~~~~i~~~l~~~~~~~~~~~i~~~~~~~~--~l~~~~~~g~d~ls~d~~~d~~~~~~~~g~~~~l~GNldP~~L~gt~e 302 (354)
T 3cyv_A 225 YYMHKIVDGLLRENDGRRVPVTLFTKGGGQ--WLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPA 302 (354)
T ss_dssp HHHHHHHHHSCSEETTEECCEEEECTTTTT--THHHHHTTSCSEEECCTTSCHHHHHHHHTTTSEEECCBCGGGGGSCHH
T ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCHHH--HHHHHHHHCCCEECCCCCCCHHHHHHHCCCCCEEEECCCHHHHCCCHH
T ss_conf 879999999986257887138731687099--887888618760056667699999997489953881788689769999
Q ss_pred HHHHHHHHHHHHHHH-HHHCCCEEEECCCCC----HHHHHHHHHHC
Q ss_conf 433666889998766-541562352078989----87799999736
Q gi|254780438|r 174 QERIFLNKLAITAQL-AQKMDLQINAGHDLT----IQNIPNLINAI 214 (261)
Q Consensus 174 ~~~~el~~i~~aa~~-A~~lgL~VnAGHgLn----~~Nl~~~i~~I 214 (261)
+.. +...++.+. +..-|.-+|-|||+- .+|+..++..+
T Consensus 303 ~i~---~~~~~~l~~~~~~~g~I~~~Ghgi~p~tp~env~a~veav 345 (354)
T 3cyv_A 303 RIE---EEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345 (354)
T ss_dssp HHH---HHHHHHHTTTTTSSCEEBCBSSCCCTTSCHHHHHHHHHHH
T ss_pred HHH---HHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 999---9999999984799995997999879998999999999999
Done!