HHSEARCH alignment of GI: 254780438 and SCOP domain: d1h1ya_

Alignment
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=90.99  E-value=0.58  Score=25.00  Aligned_cols=167  Identities=17%  Similarity=0.234  Sum_probs=98.1

Q ss_pred             CCCCCCHHHHHHHHCCCCC------CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             5332214432232207886------8998999999997499899982478833488899999887400013674158883
Q gi|254780438|r    4 SVSVNLNAVAVLRNRRNLP------WPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG   77 (261)
Q Consensus         4 ~LsVNidhiAtLRnaRg~~------~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg   77 (261)
                      +++...+.+..+|.--.-.      .=+|.+......++|++.||+|.-...-     ++..+...+...  +.+.-+-.
T Consensus        43 n~t~~~~~i~~i~~~~~~~~dvHLMv~~p~~~i~~~~~~g~~~I~~H~E~~~~-----~~~~~i~~i~~~--g~~~Glal  115 (220)
T d1h1ya_          43 NLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRD-----NWQELIQSIKAK--GMRPGVSL  115 (220)
T ss_dssp             CBCBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGGCTT-----THHHHHHHHHHT--TCEEEEEE
T ss_pred             CCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCH-----HHHHHHHHHHHC--CCCCCEEE
T ss_conf             54558366656654245013438875105455577653023415640010101-----288999999974--97723242


Q ss_pred             CCCH---HHHHHHHHHC-CCEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf             4856---8999998507-21289710165553335782213-33788999998620269638997254444147999974
Q gi|254780438|r   78 YPNE---TFLNLCERYK-PEQITLVPDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL  152 (261)
Q Consensus        78 ~p~~---e~i~ia~~ik-P~qvtLVPe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~  152 (261)
                      +|..   ....+..... -+.|++.=..|+-    +|-.+. .-.++    |+.+++.+-.+.+-+|-..+...+....+
T Consensus       116 ~p~t~~~~~~~~l~~~~~~d~vlim~v~PG~----~GQ~f~~~~l~k----I~~l~~~~~~~~I~VDGGIn~~~i~~l~~  187 (220)
T d1h1ya_         116 RPGTPVEEVFPLVEAENPVELVLVMTVEPGF----GGQKFMPEMMEK----VRALRKKYPSLDIEVDGGLGPSTIDVAAS  187 (220)
T ss_dssp             CTTSCGGGGHHHHHSSSCCSEEEEESSCTTC----SSCCCCGGGHHH----HHHHHHHCTTSEEEEESSCSTTTHHHHHH
T ss_pred             CCCCCHHHHHHHHHCCCCCCEEEEEECCCCC----CCCCCCHHHHHH----HHHHHHCCCCCEEEEEECCCHHHHHHHHH
T ss_conf             1342156787777423566568887147998----644430046679----99998628976299992579999999998


Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             06614651121110244435643366688999876654
Q gi|254780438|r  153 TGADCIELYTGPYGACYNNPQQERIFLNKLAITAQLAQ  190 (261)
Q Consensus       153 ~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~A~  190 (261)
                      .|||.+=.=++=    |..+. ....+..++++++.|+
T Consensus       188 aGad~~V~GS~i----f~~~d-~~~~i~~lr~~~~~a~  220 (220)
T d1h1ya_         188 AGANCIVAGSSI----FGAAE-PGEVISALRKSVEGSQ  220 (220)
T ss_dssp             HTCCEEEESHHH----HTSSC-HHHHHHHHHHHHHHC-
T ss_pred             CCCCEEEECHHH----HCCCC-HHHHHHHHHHHHHHCC
T ss_conf             799999978799----78999-9999999999998668


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Rice (Oryza sativa) [TaxId: 4530]