HHSEARCH alignment of GI: 254780438 and SCOP domain: d1m5wa_

Alignment
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=723.03  Aligned_cols=240  Identities=33%  Similarity=0.521  Sum_probs=230.6

Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCH
Q ss_conf             84533221443223220788689989999999974998999824788334888999998874000136741588834856
Q gi|254780438|r    2 STSVSVNLNAVAVLRNRRNLPWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNE   81 (261)
Q Consensus         2 ~t~LsVNidhiAtLRnaRg~~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~   81 (261)
                      .++||||||||||||||||+++|||++||.+|+++||||||||||||||||||+||+.|++.+     ++|||+||+|++
T Consensus         2 ~m~LsVNidhiAtLRnaRg~~~Pd~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~-----~~~lNlE~a~~~   76 (242)
T d1m5wa_           2 ELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTL-----DTRMNLEMAVTE   76 (242)
T ss_dssp             CCEEEEECHHHHHHHHTSSCCCSCHHHHHHHHHTTTCSEEEEECCTTCSSSCHHHHHHHHHHC-----SSEEEEEECSSH
T ss_pred             CCEEEEEECEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHH-----HCCCCCCCCCCH
T ss_conf             845876311044210058999999999999999849986895778875655658899998875-----201254533422


Q ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEC
Q ss_conf             89999985072128971016555333578221333788999998620269638997254444147999974066146511
Q gi|254780438|r   82 TFLNLCERYKPEQITLVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELY  161 (261)
Q Consensus        82 e~i~ia~~ikP~qvtLVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElh  161 (261)
                      +|+++|+++||+|||||||+|+|+|||||||+.++.++|+++|++|+++|||||||||||++|  |++|+++|||+||||
T Consensus        77 e~i~ia~~~kP~qvtLVPe~r~elTTegGld~~~~~~~L~~~i~~l~~~girvSLFiDpd~~~--i~~a~~lGad~IElh  154 (242)
T d1m5wa_          77 EMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQ--IKAAAEVGAPFIEIH  154 (242)
T ss_dssp             HHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHH--HHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHHCCCCEEEEE
T ss_conf             489999871632278862575555767755202158899999999986697079994452465--778864276635532


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             21110244435643366688999876654156235207898987799999736996388425999999999409999999
Q gi|254780438|r  162 TGPYGACYNNPQQERIFLNKLAITAQLAQKMDLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFC  241 (261)
Q Consensus       162 TG~Ya~a~~~~~~~~~el~~i~~aa~~A~~lgL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~  241 (261)
                      ||+||+++.++... .++++|++++++|+++||+|||||||||+|+++ +++||+|+||||||||||||||+||++||++
T Consensus       155 TG~Ya~a~~~~~~~-~el~~i~~aa~~A~~lGL~VnAGHgLn~~Nl~~-i~~ip~i~EvsIGHaiI~eal~~Gl~~aV~~  232 (242)
T d1m5wa_         155 TGCYADAKTDAEQA-QELARIAKAATFAASLGLKVNAGHGLTYHNVKA-IAAIPEMHELNIGHAIIGRAVMTGLKDAVAE  232 (242)
T ss_dssp             CHHHHHCCSHHHHH-HHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHH-HHTCTTEEEEEECHHHHHHHHHHCHHHHHHH
T ss_pred             CCCCCCCCCCHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHCCCCCEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf             02110235410257-789999999999986688555898867200599-8448997688456999999999719999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999997410
Q gi|254780438|r  242 FRRACGQHL  250 (261)
Q Consensus       242 ~~~ii~~~~  250 (261)
                      |+++|+++|
T Consensus       233 ~~~ii~~~r  241 (242)
T d1m5wa_         233 MKRLMLEAR  241 (242)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHCC
T ss_conf             999998705


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Pyridoxine 5'-phosphate synthase
family: Pyridoxine 5'-phosphate synthase
domain: Pyridoxine 5'-phosphate synthase
species: Escherichia coli [TaxId: 562]