HHSEARCH alignment of GI: 254780438 and SCOP domain: d1ps9a1

Alignment
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=90.42  E-value=0.64  Score=24.66  Aligned_cols=127  Identities=16%  Similarity=0.071  Sum_probs=60.4

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCC-------CCEEEEEE--CC--CCC--CHHHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf             5533357822133378899999862026-------96389972--54--444--14799997406614651121110244
Q gi|254780438|r  103 HQLTSDHGWDFLQNQALLTKTVARLHNL-------GSRISLFA--DG--NGN--EHSLQAAKLTGADCIELYTGPYGACY  169 (261)
Q Consensus       103 ~elTTegGldv~~~~~~L~~~i~~l~~~-------girvSLFI--Dp--d~~--q~~i~~a~~~Gad~VElhTG~Ya~a~  169 (261)
                      +..|-+-|=++.....++.++++.+++.       ++|+|..=  +.  +.+  ...++...+.|+|.+....|.|....
T Consensus       177 N~RtDeYGGs~enR~Rf~~Eii~air~~vg~d~~v~~R~s~~d~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~g~~~~~~  256 (330)
T d1ps9a1         177 NQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARI  256 (330)
T ss_dssp             CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             54456677247664477999999999973887605751561001468888899999999999850002211246544432


Q ss_pred             HHHH--HHHHHHHHHHHHHHHHHHCCCEEE-ECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
Q ss_conf             4356--433666889998766541562352-07898987799999736996388425999999999
Q gi|254780438|r  170 NNPQ--QERIFLNKLAITAQLAQKMDLQIN-AGHDLTIQNIPNLINAIPYISEISVGHAFAATALE  232 (261)
Q Consensus       170 ~~~~--~~~~el~~i~~aa~~A~~lgL~Vn-AGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~  232 (261)
                      ....  .....+..+.+..+.+.  ++-|= +|.--+.+-...+++. ...+=|.+|.++|++--+
T Consensus       257 ~~~~~~~~~~~~~~~~~~ik~~~--~~pvi~~G~i~~~~~ae~~l~~-g~~D~V~~gR~~iadP~~  319 (330)
T d1ps9a1         257 PTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSR-GDADMVSMARPFLADAEL  319 (330)
T ss_dssp             CSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHT-TSCSEEEESTHHHHCTTH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHHC-CCCCHHHHHHHHHHCHHH
T ss_conf             33477776206799999998647--9619996998989999999987-996615762999869129


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: 2,4-dienoyl-CoA reductase, N-terminal domain
species: Escherichia coli [TaxId: 562]