HHSEARCH alignment of GI: 254780438 and SCOP domain: d1rpxa_

Alignment
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=95.28  E-value=0.049  Score=32.38  Aligned_cols=198  Identities=11%  Similarity=0.115  Sum_probs=127.3

Q ss_pred             CCCCHHHHHHHHHHCCCCEEEEEC-----CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE
Q ss_conf             689989999999974998999824-----788334888999998874000136741588834856899999850721289
Q gi|254780438|r   22 PWPNLVHIGKIALQSGASGLTVHP-----RPDQRHIRYTDLPEIRRLIDEQFPKAELNIEGYPNETFLNLCERYKPEQIT   96 (261)
Q Consensus        22 ~~P~~~~~a~~~~~~GadgITvH~-----R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg~p~~e~i~ia~~ikP~qvt   96 (261)
                      ++=++.+....+.++|+|.|-+-.     =|.- -..+.-+..+++...   ...+..|=...-..+++-..+..++.+|
T Consensus        21 d~~~l~~~i~~l~~~g~d~iHiDImDG~Fvpn~-t~~~~~v~~i~~~t~---~~~dvHLMv~~P~~~i~~~~~~g~~~i~   96 (230)
T d1rpxa_          21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-TIGPLVVDSLRPITD---LPLDVHLMIVEPDQRVPDFIKAGADIVS   96 (230)
T ss_dssp             CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-CCCHHHHHHHGGGCC---SCEEEEEESSSHHHHHHHHHHTTCSEEE
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHCCC---CEEEEEEEECCHHHHHHHHHHCCCCEEE
T ss_conf             989999999999974999899967469717765-528578766553357---5064533322066667887532562257


Q ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf             71016555333578221333788999998620269638997254444147999974066146511211102444356433
Q gi|254780438|r   97 LVPDDPHQLTSDHGWDFLQNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGADCIELYTGPYGACYNNPQQER  176 (261)
Q Consensus        97 LVPe~r~elTTegGldv~~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Gad~VElhTG~Ya~a~~~~~~~~  176 (261)
                      +-.|.....             .+..++..+++.|+++.|=+.|+..-..++.-.. -+|.|=+=|-.-  -|...+...
T Consensus        97 ~H~E~~~~~-------------~~~~~i~~ik~~g~k~Gialnp~T~~~~l~~~l~-~vD~VllM~V~P--Gf~GQ~f~~  160 (230)
T d1rpxa_          97 VHCEQSSTI-------------HLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLD-AVDLVLIMSVNP--GFGGQSFIE  160 (230)
T ss_dssp             EECSTTTCS-------------CHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTT-TCSEEEEESSCT--TCSSCCCCT
T ss_pred             EECCCCCCC-------------CHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHH-HCCEEEEEEECC--CCCCCHHHH
T ss_conf             732223530-------------5999999999869859999679998799999996-579899987368--864200135


Q ss_pred             HHHHHHHHHHHHHHHC--CCEEEECCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             6668899987665415--6235207898987799999736996388425999999999409999999999
Q gi|254780438|r  177 IFLNKLAITAQLAQKM--DLQINAGHDLTIQNIPNLINAIPYISEISVGHAFAATALECGVKEAVFCFRR  244 (261)
Q Consensus       177 ~el~~i~~aa~~A~~l--gL~VnAGHgLn~~Nl~~~i~~Ip~I~EvsIGHaiIseAl~~GL~~aI~~~~~  244 (261)
                      .-++|+++..++..+.  .+.+-+-=|.|.+|++.+.+  -+.+-+-.|-+|...   -..++++++++.
T Consensus       161 ~~~~kI~~~~~~~~~~~~~~~I~vDGGIn~~~i~~l~~--~Gad~~V~GS~if~~---~d~~~~i~~lk~  225 (230)
T d1rpxa_         161 SQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIE--AGANALVAGSAVFGA---PDYAEAIKGIKT  225 (230)
T ss_dssp             THHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHH--HTCCEEEESHHHHTS---SCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH--CCCCEEEECHHHHCC---CCHHHHHHHHHH
T ss_conf             66899999877777537734899987768999999997--699999988698789---999999999997


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Potato (Solanum tuberosum) [TaxId: 4113]