HHSEARCH alignment of GI: 254780438 and SCOP domain: d1rpxa_

Alignment
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=91.54  E-value=0.51  Score=25.36  Aligned_cols=167  Identities=13%  Similarity=0.126  Sum_probs=104.5

Q ss_pred             CCCCCCHHHHHHHHCCCCCC--------CCHHHHHHHHHHCCCCEEEEECCC-CCCCCCHHHHHHHHHHHCCCCCCCEEE
Q ss_conf             53322144322322078868--------998999999997499899982478-833488899999887400013674158
Q gi|254780438|r    4 SVSVNLNAVAVLRNRRNLPW--------PNLVHIGKIALQSGASGLTVHPRP-DQRHIRYTDLPEIRRLIDEQFPKAELN   74 (261)
Q Consensus         4 ~LsVNidhiAtLRnaRg~~~--------P~~~~~a~~~~~~GadgITvH~R~-DrRHI~~~Dv~~l~~~~~~~~~~~elN   74 (261)
                      +++...+-+.-+|..  .+.        -+|........++|++-||+|.-. +.-|+ .+-+..+++    .  +...-
T Consensus        52 n~t~~~~~v~~i~~~--t~~~~dvHLMv~~P~~~i~~~~~~g~~~i~~H~E~~~~~~~-~~~i~~ik~----~--g~k~G  122 (230)
T d1rpxa_          52 NITIGPLVVDSLRPI--TDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHL-HRTINQIKS----L--GAKAG  122 (230)
T ss_dssp             CBCCCHHHHHHHGGG--CCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTCSCH-HHHHHHHHH----T--TSEEE
T ss_pred             CCCCCHHHHHHHHHC--CCCEEEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCH-HHHHHHHHH----C--CCEEE
T ss_conf             655285787665533--57506453332206666788753256225773222353059-999999998----6--98599


Q ss_pred             EEECCCHHHHHHHHH-HCCCEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf             883485689999985-0721289710165553335782213-33788999998620269638997254444147999974
Q gi|254780438|r   75 IEGYPNETFLNLCER-YKPEQITLVPDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKL  152 (261)
Q Consensus        75 iEg~p~~e~i~ia~~-ikP~qvtLVPe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~  152 (261)
                      |-.+|...+-.+..- -.-++|++.-..|+-    +|..+. .-.++++.+.+.+.+.+-.+.+=+|-..+...+....+
T Consensus       123 ialnp~T~~~~l~~~l~~vD~VllM~V~PGf----~GQ~f~~~~~~kI~~~~~~~~~~~~~~~I~vDGGIn~~~i~~l~~  198 (230)
T d1rpxa_         123 VVLNPGTPLTAIEYVLDAVDLVLIMSVNPGF----GGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIE  198 (230)
T ss_dssp             EEECTTCCGGGGTTTTTTCSEEEEESSCTTC----SSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHH
T ss_pred             EEECCCCCHHHHHHHHHHCCEEEEEEECCCC----CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
T ss_conf             9967999879999999657989998736886----420013566899999877777537734899987768999999997


Q ss_pred             CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             066146511211102444356433666889998766
Q gi|254780438|r  153 TGADCIELYTGPYGACYNNPQQERIFLNKLAITAQL  188 (261)
Q Consensus       153 ~Gad~VElhTG~Ya~a~~~~~~~~~el~~i~~aa~~  188 (261)
                      .|||.+=.  |.|  .|+.+. .+..+.+++.++++
T Consensus       199 ~Gad~~V~--GS~--if~~~d-~~~~i~~lk~~~~~  229 (230)
T d1rpxa_         199 AGANALVA--GSA--VFGAPD-YAEAIKGIKTSKRP  229 (230)
T ss_dssp             HTCCEEEE--SHH--HHTSSC-HHHHHHHHHTCCCC
T ss_pred             CCCCEEEE--CHH--HHCCCC-HHHHHHHHHHHCCC
T ss_conf             69999998--869--878999-99999999974489


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Potato (Solanum tuberosum) [TaxId: 4113]