HHSEARCH alignment of GI: 254780438 and SCOP domain: d2flia1

Alignment
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=94.91  E-value=0.15  Score=28.99  Aligned_cols=165  Identities=15%  Similarity=0.169  Sum_probs=105.0

Q ss_pred             CCCCCCHHHHHHHHCCCC------CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             533221443223220788------68998999999997499899982478833488899999887400013674158883
Q gi|254780438|r    4 SVSVNLNAVAVLRNRRNL------PWPNLVHIGKIALQSGASGLTVHPRPDQRHIRYTDLPEIRRLIDEQFPKAELNIEG   77 (261)
Q Consensus         4 ~LsVNidhiAtLRnaRg~------~~P~~~~~a~~~~~~GadgITvH~R~DrRHI~~~Dv~~l~~~~~~~~~~~elNiEg   77 (261)
                      .+|...+.+..+|+--.-      --=+|......+.++||+-||+|..-.. +     +..+.+.+.+.  +...-+-.
T Consensus        43 n~s~g~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~ga~~i~~H~E~~~-~-----~~~~i~~i~~~--g~~~Gial  114 (217)
T d2flia1          43 NISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTR-H-----IHGALQKIKAA--GMKAGVVI  114 (217)
T ss_dssp             CBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGCS-C-----HHHHHHHHHHT--TSEEEEEE
T ss_pred             CCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCC-C-----HHHHHHHHHHC--CCEEEEEE
T ss_conf             5562889999987467872576777359889899999709967995043445-7-----78899999865--97389996


Q ss_pred             CCCHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCC
Q ss_conf             4856899999850-721289710165553335782213-33788999998620269638997254444147999974066
Q gi|254780438|r   78 YPNETFLNLCERY-KPEQITLVPDDPHQLTSDHGWDFL-QNQALLTKTVARLHNLGSRISLFADGNGNEHSLQAAKLTGA  155 (261)
Q Consensus        78 ~p~~e~i~ia~~i-kP~qvtLVPe~r~elTTegGldv~-~~~~~L~~~i~~l~~~girvSLFIDpd~~q~~i~~a~~~Ga  155 (261)
                      +|....-.+...+ +-++|.+.-..|+-    +|..+. ...++++...+.+++.+..+-+-+|-..+...+....+.||
T Consensus       115 ~p~T~~~~~~~~l~~id~vliM~V~pG~----~Gq~f~~~~~~ki~~l~~~~~~~~~~~~I~vDGGIn~~~i~~l~~aGa  190 (217)
T d2flia1         115 NPGTPATALEPLLDLVDQVLIMTVNPGF----GGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGA  190 (217)
T ss_dssp             CTTSCGGGGGGGTTTCSEEEEESSCTTC----SSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHHCCEEEEEEECCCC----CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC
T ss_conf             3776554777687640878999976765----544210024788988888887509974899927878888999998799


Q ss_pred             CEEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             146511211102444356433666889998
Q gi|254780438|r  156 DCIELYTGPYGACYNNPQQERIFLNKLAIT  185 (261)
Q Consensus       156 d~VElhTG~Ya~a~~~~~~~~~el~~i~~a  185 (261)
                      |.+=.=++    .|..+. ....+.+++.+
T Consensus       191 d~~V~Gsa----if~~~d-~~~~i~~lr~~  215 (217)
T d2flia1         191 NVFVAGSY----LFKASD-LVSQVQTLRTA  215 (217)
T ss_dssp             CEEEESHH----HHTSSC-HHHHHHHHHHH
T ss_pred             CEEEECHH----HHCCCC-HHHHHHHHHHH
T ss_conf             99997448----857999-99999999986


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Ribulose-phoshate binding barrel
family: D-ribulose-5-phosphate 3-epimerase
domain: D-ribulose-5-phosphate 3-epimerase
species: Streptococcus pyogenes [TaxId: 1314]