HHsearch alignment for GI: 254780439 and conserved domain: COG0045
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=97.71 E-value=0.00079 Score=48.11 Aligned_cols=166 Identities=25% Similarity=0.320 Sum_probs=116.2
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999998789888620002344333332333333344444444333322211111123344444445544489999999
Q gi|254780439|r 131 LFSKAMQNIPLATPKSILANATDIKEHDRKLHEEERENLKKTLSKEELDAALYALELKWNLEENDRKHRYICHAMAVAVQ 210 (1162)
Q Consensus 131 ~F~~~l~~~gip~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ea~~ 210 (1162)
T Consensus 7 qaKelf~~~GiPvp~g~v~~-----------------------------------------------------s~eea~~ 33 (387)
T COG0045 7 QAKELFAKYGIPVPPGYVAT-----------------------------------------------------SPEEAEE 33 (387)
T ss_pred HHHHHHHHCCCCCCCCEEEE-----------------------------------------------------CHHHHHH
T ss_conf 89989997299899954540-----------------------------------------------------8999999
Q ss_pred HHHHCC-CCEEEEECCCCCCCC----CCCCCCHHHHHHHHHHHHH----HC----CCCCEEEEEECC-CCEEEEEEEEEE
Q ss_conf 998719-969994132678664----5111699999999998998----57----998279866449-978999999972
Q gi|254780439|r 211 ALDEIG-LPLIIRPSFTLGGTG----GGIAYNRSEFLEIVENGLH----AS----PTTEVLIEESVL-GWKEYELEMMRD 276 (1162)
Q Consensus 211 ~a~~iG-yPvivRps~~lGG~G----~~iv~n~eeL~~~~~~al~----~s----~~~~vlIeksl~-g~kEiE~eVirD 276 (1162)
T Consensus 34 ~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~~~~G~~v~~vlvee~~~~~~~E~Ylsiv~D 113 (387)
T COG0045 34 AAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQTDIKGEPVNKVLVEEAVDIIKKEYYLSIVLD 113 (387)
T ss_pred HHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEE
T ss_conf 99981899679992253057666676688389899999999984866545768845428999746777643379999997
Q ss_pred CCCCEEEEEE-CC---CCCCCCCC---CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE---EE---C
Q ss_conf 8998899963-00---00001000---01013433732289889999999999999871834576468999---95---5
Q gi|254780439|r 277 IKGNCIVVCS-IE---NLDPMGVH---TGDSITVAPALTLTDKEYQLMRNAAIAVLKEIGVESGGANVQFA---VN---P 343 (1162)
Q Consensus 277 ~~gn~i~v~~-~E---n~dp~GiH---tGDSi~vaP~qTL~d~~~q~LR~~a~kI~r~lgi~vG~~nVQFA---v~---p 343 (1162)
T Consensus 114 R~~~~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~~~~-------aR~la~~lgl~-~~~~~~~~~ii~~ly~~ 185 (387)
T COG0045 114 RSSRRPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLRPYQ-------ARELAFKLGLE-GELVKQVADIIKKLYKL 185 (387)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCCHHH-------HHHHHHHCCCC-HHHHHHHHHHHHHHHHH
T ss_conf 37783799996677951899500283452689747766878779-------99999974998-78999999999999999
Q ss_pred -CCCEEEEEEECCCC
Q ss_conf -89849998504443
Q gi|254780439|r 344 -KNGKMVVIEMNPRV 357 (1162)
Q Consensus 344 -~~~~~yvIEvNpR~ 357 (1162)
T Consensus 186 f~~~Da~lvEINPLv 200 (387)
T COG0045 186 FVEKDATLVEINPLV 200 (387)
T ss_pred HHHCCCCEEEEECCE
T ss_conf 997587678752508