HHsearch alignment for GI: 254780439 and conserved domain: COG0045

>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion].
Probab=97.71  E-value=0.00079  Score=48.11  Aligned_cols=166  Identities=25%  Similarity=0.320  Sum_probs=116.2

Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999998789888620002344333332333333344444444333322211111123344444445544489999999
Q gi|254780439|r  131 LFSKAMQNIPLATPKSILANATDIKEHDRKLHEEERENLKKTLSKEELDAALYALELKWNLEENDRKHRYICHAMAVAVQ  210 (1162)
Q Consensus       131 ~F~~~l~~~gip~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ea~~  210 (1162)
T Consensus         7 qaKelf~~~GiPvp~g~v~~-----------------------------------------------------s~eea~~   33 (387)
T COG0045           7 QAKELFAKYGIPVPPGYVAT-----------------------------------------------------SPEEAEE   33 (387)
T ss_pred             HHHHHHHHCCCCCCCCEEEE-----------------------------------------------------CHHHHHH
T ss_conf             89989997299899954540-----------------------------------------------------8999999


Q ss_pred             HHHHCC-CCEEEEECCCCCCCC----CCCCCCHHHHHHHHHHHHH----HC----CCCCEEEEEECC-CCEEEEEEEEEE
Q ss_conf             998719-969994132678664----5111699999999998998----57----998279866449-978999999972
Q gi|254780439|r  211 ALDEIG-LPLIIRPSFTLGGTG----GGIAYNRSEFLEIVENGLH----AS----PTTEVLIEESVL-GWKEYELEMMRD  276 (1162)
Q Consensus       211 ~a~~iG-yPvivRps~~lGG~G----~~iv~n~eeL~~~~~~al~----~s----~~~~vlIeksl~-g~kEiE~eVirD  276 (1162)
T Consensus        34 ~a~~lg~~~~VvKaQV~aGGRGKaGGVk~~~s~~ea~~~a~~~lg~~~q~~~~G~~v~~vlvee~~~~~~~E~Ylsiv~D  113 (387)
T COG0045          34 AAKELGGGPVVVKAQVHAGGRGKAGGVKLAKSPEEAKEAAEEILGKNYQTDIKGEPVNKVLVEEAVDIIKKEYYLSIVLD  113 (387)
T ss_pred             HHHHHCCCCEEEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEE
T ss_conf             99981899679992253057666676688389899999999984866545768845428999746777643379999997


Q ss_pred             CCCCEEEEEE-CC---CCCCCCCC---CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE---EE---C
Q ss_conf             8998899963-00---00001000---01013433732289889999999999999871834576468999---95---5
Q gi|254780439|r  277 IKGNCIVVCS-IE---NLDPMGVH---TGDSITVAPALTLTDKEYQLMRNAAIAVLKEIGVESGGANVQFA---VN---P  343 (1162)
Q Consensus       277 ~~gn~i~v~~-~E---n~dp~GiH---tGDSi~vaP~qTL~d~~~q~LR~~a~kI~r~lgi~vG~~nVQFA---v~---p  343 (1162)
T Consensus       114 R~~~~p~~~~S~eGGmDIEeVa~~~PekI~~~~idp~~g~~~~~-------aR~la~~lgl~-~~~~~~~~~ii~~ly~~  185 (387)
T COG0045         114 RSSRRPVLMASTEGGMDIEEVAEKTPEKIVKVSVDPLTGLRPYQ-------ARELAFKLGLE-GELVKQVADIIKKLYKL  185 (387)
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHCHHHEEEEEECCCCCCCHHH-------HHHHHHHCCCC-HHHHHHHHHHHHHHHHH
T ss_conf             37783799996677951899500283452689747766878779-------99999974998-78999999999999999


Q ss_pred             -CCCEEEEEEECCCC
Q ss_conf             -89849998504443
Q gi|254780439|r  344 -KNGKMVVIEMNPRV  357 (1162)
Q Consensus       344 -~~~~~yvIEvNpR~  357 (1162)
T Consensus       186 f~~~Da~lvEINPLv  200 (387)
T COG0045         186 FVEKDATLVEINPLV  200 (387)
T ss_pred             HHHCCCCEEEEECCE
T ss_conf             997587678752508