HHsearch alignment for GI: 254780439 and conserved domain: COG0541
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion].
Probab=90.48 E-value=1.2 Score=22.98 Aligned_cols=45 Identities=20% Similarity=0.233 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 899999999987199699941326786645111699999999998998579
Q gi|254780439|r 203 HAMAVAVQALDEIGLPLIIRPSFTLGGTGGGIAYNRSEFLEIVENGLHASP 253 (1162)
Q Consensus 203 ~s~~ea~~~a~~iGyPvivRps~~lGG~G~~iv~n~eeL~~~~~~al~~s~ 253 (1162)
T Consensus 169 ~Iak~al~~ak~~~~DvvIvD------TAGRl~ide~Lm~El~~Ik~~~~P 213 (451)
T COG0541 169 EIAKAALEKAKEEGYDVVIVD------TAGRLHIDEELMDELKEIKEVINP 213 (451)
T ss_pred HHHHHHHHHHHHCCCCEEEEE------CCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999999997499889996------887330309999999999855398