HHsearch alignment for GI: 254780439 and conserved domain: PRK00683
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=92.00 E-value=0.88 Score=23.97 Aligned_cols=68 Identities=21% Similarity=0.407 Sum_probs=43.7
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCE
Q ss_conf 55699997677542050546668889999999987978999748765010784513100433799999999998628988
Q gi|254780439|r 6 DLKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEPITPEVVAKIIEKERPDA 85 (1162)
Q Consensus 6 dikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~ePlt~e~v~~Ii~~E~pDa 85 (1162)
T Consensus 2 ~~KkvlV~GlG~S-----------G~s~a~~L~~~g~~v~~~D~~~~~~~~~~-~~~~~~~~~-----~~~~--~~~~d~ 62 (418)
T PRK00683 2 GLQRVVVLGLGVT-----------GKSVARFLAQKGVYVIGVDNSLEALQSCP-YIHERYLEG-----AEEF--PEQVDL 62 (418)
T ss_pred CCCEEEEEEECHH-----------HHHHHHHHHHCCCEEEEECCCHHHHHHCC-HHHHHCCCC-----HHHC--CCCCCE
T ss_conf 9866999808887-----------99999999978298999829814545461-455540562-----3324--234989
Q ss_pred EEECCCC
Q ss_conf 9975887
Q gi|254780439|r 86 ILPTTGG 92 (1162)
Q Consensus 86 Ilp~~GG 92 (1162)
T Consensus 63 vv~SPGi 69 (418)
T PRK00683 63 VVRSPGI 69 (418)
T ss_pred EEECCCC
T ss_conf 9989985