HHsearch alignment for GI: 254780439 and conserved domain: PRK03562

Probab=95.67  E-value=0.087  Score=31.95  Aligned_cols=79  Identities=11%  Similarity=0.117  Sum_probs=36.6

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEE--CCCCHHHHCCCHH--------HHHHHHHHCCCCCCCCC--CCCCHHHHHHHH
Q ss_conf             99844512466898888875983861--2752033102867--------89998887098668542--112156655565
Q gi|254780439|r  701 IIVQFGGQTPLKLSKILEKNQIPILG--TQPDSIDLAEDRD--------RFQKLLMELDLNQPRNG--ISHSVEHARLIA  768 (1162)
Q Consensus       701 vi~q~gGqt~~~la~~L~~~gv~ilG--ts~~~Id~aEDR~--------~F~~ll~~l~i~~p~~~--~a~s~eea~~~a  768 (1162)
T Consensus       402 VII~G~GRvGq~var~L~~~gi~~vviD~d~~~V~~~r~~G~~v~yGDat~~~vL~~AGi~~Ar~vViaidd~~~~~~iv  481 (615)
T PRK03562        402 VIIAGFGRFGQIVGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLT  481 (615)
T ss_pred             EEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHH
T ss_conf             89990280469999999978998799979999999999679908976899999998679140688999949899999999


Q ss_pred             HHC-----CCCEEEEC
Q ss_conf             536-----97167513
Q gi|254780439|r  769 CEI-----GFPLLIRP  779 (1162)
Q Consensus       769 ~~i-----GyPVLVRP  779 (1162)
T Consensus       482 ~~~r~~~P~l~IiaRa  497 (615)
T PRK03562        482 ELVKEHFPHLQIIARA  497 (615)
T ss_pred             HHHHHHCCCCEEEEEE
T ss_conf             9999758998699983