HHsearch alignment for GI: 254780439 and conserved domain: PRK05192

>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated.
Probab=91.87  E-value=0.79  Score=24.38  Aligned_cols=98  Identities=26%  Similarity=0.414  Sum_probs=60.6

Q ss_pred             EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             99997677542050546668889999999987978999748765010784513100433799999999998628988997
Q gi|254780439|r    9 TLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEPITPEVVAKIIEKERPDAILP   88 (1162)
Q Consensus         9 kvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~ePlt~e~v~~Ii~~E~pDaIlp   88 (1162)
T Consensus         8 DVIViG~GhA-----------G~EAa~aaar~G~~t~lit~~~~~ig~---msC------------------------NP   49 (621)
T PRK05192          8 DVIVVGGGHA-----------GCEAALAAARMGAKTLLLTHNLDTIGQ---MSC------------------------NP   49 (621)
T ss_pred             CEEEECCCHH-----------HHHHHHHHHHCCCCEEEEECCCCCEEE---EEC------------------------CC
T ss_conf             8899897579-----------999999999679967999658131158---604------------------------52


Q ss_pred             CCCCCHHHHHHHHHHHCCC-----HHHHCC--EE----ECCCHHHHHHHCCHHHHHHHHHHCCCCCC
Q ss_conf             5887026888899887596-----288287--57----14998999860588999999998789888
Q gi|254780439|r   89 TTGGQTALNTALSLKRMGV-----LDRYGV--EM----IGAKPETIDKAEDRSLFSKAMQNIPLATP  144 (1162)
Q Consensus        89 ~~GGqtalnl~~~L~e~gi-----l~~~~v--~~----lG~~~~~I~~~edR~~F~~~l~~~gip~~  144 (1162)
T Consensus        50 siGGi~KG~lvrEidaLgG~mg~~aD~~~Iq~r~LN~sKGpAv~~~RaQ~Dr~~Y~~~~~~~l~~~~  116 (621)
T PRK05192         50 AIGGIAKGHLVREIDALGGEMGKAADKTGIQFRMLNTSKGPAVRAPRAQADRKLYRAAMREILENQP  116 (621)
T ss_pred             CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             0367216576668775368999999887616876158888300673988859999999999996499