HHsearch alignment for GI: 254780439 and conserved domain: PRK06849
>PRK06849 hypothetical protein; Provisional.
Probab=99.81 E-value=1.5e-16 Score=148.82 Aligned_cols=276 Identities=19% Similarity=0.249 Sum_probs=203.3
Q ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECC--C-----CHHHHHHHH
Q ss_conf 556999976775420505466688899999999879789997487650107845131004337--9-----999999999
Q gi|254780439|r 6 DLKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEP--I-----TPEVVAKII 78 (1162)
Q Consensus 6 dikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~eP--l-----t~e~v~~Ii 78 (1162)
T Consensus 3 ~p~tvLiTg~r~~----------~aL~laR~l~~~Gh~V~~aD~~~~~l~r~Sr~v~~~~~vP~P~~d~~~y~~~Ll~Iv 72 (387)
T PRK06849 3 TPKTVLITGARAP----------AALQLARSFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPKWDPNAYIQALLSIV 72 (387)
T ss_pred CCCEEEEECCCHH----------HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9877999588607----------899999999878997999848987754200001127986999789899999999999
Q ss_pred HHHCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86289889975887026888899887596288287571499899986058899999999878988862000234433333
Q gi|254780439|r 79 EKERPDAILPTTGGQTALNTALSLKRMGVLDRYGVEMIGAKPETIDKAEDRSLFSKAMQNIPLATPKSILANATDIKEHD 158 (1162)
Q Consensus 79 ~~E~pDaIlp~~GGqtalnl~~~L~e~gil~~~~v~~lG~~~~~I~~~edR~~F~~~l~~~gip~~~s~~~~~~~~~~~~ 158 (1162)
T Consensus 73 ~~e~idl~IP~~ee--v~~~a~~~~~---l-~~~~~~~~~d~~~l~~LhdK~~F~~~a~~lGl~vP~T~~i~-------- 138 (387)
T PRK06849 73 KRHNIDLLIPTCEE--VFYLSLAKEE---L-SAYCHVFHFDFDLLLMLHNKFEFIQQARSLGLSAPKTYLIT-------- 138 (387)
T ss_pred HHHCCCEEEECCCH--HHHHHHHHHH---C-CCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC--------
T ss_conf 98389999977768--9999865764---4-76763765899999986448999999997499999889818--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 2333333344444444333322211111123344444445544489999999998-719969994132678664511169
Q gi|254780439|r 159 RKLHEEERENLKKTLSKEELDAALYALELKWNLEENDRKHRYICHAMAVAVQALD-EIGLPLIIRPSFTLGGTGGGIAYN 237 (1162)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ea~~~a~-~iGyPvivRps~~lGG~G~~iv~n 237 (1162)
T Consensus 139 ---------------------------------------------s~edv~~~~~~~~~~~~ilKPv~~~~~~~v~~~~~ 173 (387)
T PRK06849 139 ---------------------------------------------DPEAIINFDFKTPHTPYVLKPIYSRFVRRVDLTKT 173 (387)
T ss_pred ---------------------------------------------CHHHHHHHHHCCCCCCEEECCCCCCCCCEEEECCC
T ss_conf ---------------------------------------------99999865533668978982376665333652159
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
Q ss_conf 99999999989985799827986644997899999997289988999630000001000010134337322898899999
Q gi|254780439|r 238 RSEFLEIVENGLHASPTTEVLIEESVLGWKEYELEMMRDIKGNCIVVCSIENLDPMGVHTGDSITVAPALTLTDKEYQLM 317 (1162)
Q Consensus 238 ~eeL~~~~~~al~~s~~~~vlIeksl~g~kEiE~eVirD~~gn~i~v~~~En~dp~GiHtGDSi~vaP~qTL~d~~~q~L 317 (1162)
T Consensus 174 ~~~l~-----~l~~s~~~p~v~Qe~I~G~-~~ct~al~~-~Gkv~A~~~y~~~~~~~--~g~~v~fe~---v~~---p~i 238 (387)
T PRK06849 174 KAAVL-----KLPISHKSPWIMQEFIPGQ-EYCSYSIVR-SGELRAHSCYKPEFTAG--LGAQIAFQP---INN---PRI 238 (387)
T ss_pred HHHHH-----CCCCCCCCCEEEEEECCCC-EEEEEEEEE-CCEEEEEEEEECCEECC--CCEEEEEEE---CCC---HHH
T ss_conf 77861-----5887667982899871696-758999978-99999999820422058--840578897---588---899
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHH
Q ss_conf 99999999871834576468999955898499985044431035788876
Q gi|254780439|r 318 RNAAIAVLKEIGVESGGANVQFAVNPKNGKMVVIEMNPRVSRSSALASKA 367 (1162)
Q Consensus 318 R~~a~kI~r~lgi~vG~~nVQFAv~p~~~~~yvIEvNpR~sRssalaska 367 (1162)
T Consensus 239 ~e~v~~f~~~~~~-tG~isFDFI~~-~dG~~~~IECNPR~tSgi~lf~~~ 286 (387)
T PRK06849 239 EEFVTHFVKELNY-TGQISFDFIQT-ENGDAYPIECNPRTTSGLHLFDDH 286 (387)
T ss_pred HHHHHHHHHHCCC-EEEEEEEEEEC-CCCCEEEEEECCCCCCCEEEECCC
T ss_conf 9999999984785-15899999998-999889998459866644651587