HHsearch alignment for GI: 254780439 and conserved domain: PRK09496

Probab=95.54  E-value=0.068  Score=32.78  Aligned_cols=129  Identities=18%  Similarity=0.268  Sum_probs=74.6

Q ss_pred             CCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---CCCCCCCCEEEEEECCHHHHHHHHHHHCC
Q ss_conf             741899727630201476653189999999996598069960686521---12324586379841678899999987485
Q gi|254780439|r  618 RKKIVILGGGPNRIGQGIEFDYCCCHASFSLKEAGFETIMINCNPETV---STDYDIADRLYFESLTEEDILEILRVEQQ  694 (1162)
Q Consensus       618 ~kkviVlGsGp~RIGqgiEFDy~~v~a~~aLr~~G~~tImIN~NPETV---STDyd~sDrLYFEplt~E~V~~I~~~E~p  694 (1162)
T Consensus       232 ~~~v~I~Ggg~i-----------g~~la~~L-~~~~~v~iIe~d~~~~~~la~~l~~~~-Vi~GD~td~~~L~e~gi~~a  298 (455)
T PRK09496        232 VKRIMIAGGGNI-----------GLYLAKLL-EKGYSVKLIERDPERAEELAEELPNTL-VLHGDGTDQELLEEEGIDEA  298 (455)
T ss_pred             CCEEEEECCCHH-----------HHHHHHHH-HCCCEEEEECCCHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHCCCCC
T ss_conf             651899878699-----------99999987-408838997089899999997478539-99788768899976364556


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             678227998445124668988888759838612752033102867899988870986685421121566555655
Q gi|254780439|r  695 KGELVGIIVQFGGQTPLKLSKILEKNQIPILGTQPDSIDLAEDRDRFQKLLMELDLNQPRNGISHSVEHARLIAC  769 (1162)
Q Consensus       695 ~g~~~~vi~q~gGqt~~~la~~L~~~gv~ilGts~~~Id~aEDR~~F~~ll~~l~i~~p~~~~a~s~eea~~~a~  769 (1162)
T Consensus       299 D-----~~ia~T~~De~Ni~~~llAk~---~g~~-~~ia~v~-~~~y~~l~~~lgid~~isp~~~~a~~I~~~i~  363 (455)
T PRK09496        299 D-----AFIALTNDDEANILSSLLAKR---LGAK-KVIALIN-RSAYVDLVQGLGIDIAISPRQATISAILRHVR  363 (455)
T ss_pred             C-----EEEEECCCHHHHHHHHHHHHH---CCCC-CEEEEEC-CHHHHHHHHHCCCCEEECHHHHHHHHHHHHHC
T ss_conf             4-----899903881889999999987---3997-3688844-66788765324886578889999999999840