HHsearch alignment for GI: 254780439 and conserved domain: PRK10446
>PRK10446 ribosomal protein S6 modification protein; Provisional.
Probab=99.63 E-value=3.4e-13 Score=122.24 Aligned_cols=276 Identities=19% Similarity=0.228 Sum_probs=198.6
Q ss_pred EEEEECCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCC
Q ss_conf 18997276302014766531899999999965980699606865211232458637984167889999998748567822
Q gi|254780439|r 620 KIVILGGGPNRIGQGIEFDYCCCHASFSLKEAGFETIMINCNPETVSTDYDIADRLYFESLTEEDILEILRVEQQKGELV 699 (1162)
Q Consensus 620 kviVlGsGp~RIGqgiEFDy~~v~a~~aLr~~G~~tImIN~NPETVSTDyd~sDrLYFEplt~E~V~~I~~~E~p~g~~~ 699 (1162)
T Consensus 2 ki~iLs~~~~--------~yst~RL~eaa~~rGh~v~vidp~~~~~~i~~~~~-~v~~~g~~L~---------~~D---- 59 (300)
T PRK10446 2 KIAILSRDGT--------LYSCKRLREAAIQRGHLVEILDPLSCYMNINPAAS-SIHYKGRKLP---------HFD---- 59 (300)
T ss_pred EEEEEECCCC--------CCHHHHHHHHHHHCCCEEEEEEHHHCEEEECCCCC-EEEECCEECC---------CCC----
T ss_conf 7999936997--------60799999999987995999614891898248986-4998980868---------788----
Q ss_pred EEEEECCCH---HHHHHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC-CCCE
Q ss_conf 799844512---466898888875983861275203310286789998887098668542112156655565536-9716
Q gi|254780439|r 700 GIIVQFGGQ---TPLKLSKILEKNQIPILGTQPDSIDLAEDRDRFQKLLMELDLNQPRNGISHSVEHARLIACEI-GFPL 775 (1162)
Q Consensus 700 ~vi~q~gGq---t~~~la~~L~~~gv~ilGts~~~Id~aEDR~~F~~ll~~l~i~~p~~~~a~s~eea~~~a~~i-GyPV 775 (1162)
T Consensus 60 avipR~g~~~t~~~~~vLr~lE~~Gv~vi-N~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~~~~~~~~~i~~~gg~Pv 138 (300)
T PRK10446 60 AVIPRIGTAITFYGTAALRQFEMLGSYPL-NESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPL 138 (300)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHCCCCEE-CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCE
T ss_conf 89982677745589999999998899186-48999998576999999998759799988983699999999998089978
Q ss_pred EEECCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECC
Q ss_conf 75134444565412554899999999975210132211112233333333455777745670220120100101023079
Q gi|254780439|r 776 LIRPSYVLGGRAMQIVYSENMLQDYLLDTLPGLVSEEIKRQYPNDKTGQINTLLGTHPLLFDSYLSDAMEIDVDALCQND 855 (1162)
Q Consensus 776 LVRPSyVLGG~~M~Iv~~~~eL~~yl~~a~~~~~~~~~~~~~~~~~~~~~~~vs~~~pVlIdkfl~~a~EiEVDai~Dg~ 855 (1162)
T Consensus 139 ViKpl~Gs~G~GV~l~e~~~~~~~i~~~~-~----------------------~~~~~~~iQeyI~~~~g~D~Rv~vvgg 195 (300)
T PRK10446 139 VVKLVEGTQGIGVVLAETRQAAESVIDAF-R----------------------GLNAHILVQEYIKEAQGCDIRCLVVGD 195 (300)
T ss_pred EEEECCCCCCCCEEEEECHHHHHHHHHHH-H----------------------HCCCCEEEEEECCCCCCCCEEEEEECC
T ss_conf 99967898860369973789999999988-6----------------------228737752202555798679999998
Q ss_pred CEEEEEEECCCCH-----HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCC
Q ss_conf 8499985201102-----15245762798168668999999999999999874133576247885128859998524444
Q gi|254780439|r 856 QVIVVGIIEHIEE-----AGIHSGDSACSLPSRSLSQQLKDELISQTKALAGALNVIGLINVQYAIKDGKIYILEVNPRA 930 (1162)
Q Consensus 856 ~v~I~gimEHiE~-----aGVHSGDS~~v~PpqsLs~~~~~~i~~~t~~ia~~L~v~G~~NIQfa~kd~~iYVIEvNpRa 930 (1162)
T Consensus 196 ~vv--aam~R~~~~g~~rtN~~~Gg~~~~~---~l~~e~~----~la~~a~~~lgl-~~~GVDii~~~~g~~v~EVN--~ 263 (300)
T PRK10446 196 EVV--AAIERRAKEGDFRSNLHRGGAASVA---SITPQER----EIAIKAARTMAL-DVAGVDILRANRGPLVMEVN--A 263 (300)
T ss_pred EEH--HHEEEECCCCCEEEEEECCCEEEEC---CCCHHHH----HHHHHHHHHHCC-CEEEEEEEEECCCCEEEEEC--C
T ss_conf 624--4389973788347777039776532---8999999----999999998699-68999998828998899993--8
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 56304567773988999999998
Q gi|254780439|r 931 SRTVPFIAKAIGFPVAKVAARII 953 (1162)
Q Consensus 931 SRtvPfvSKatG~pl~~iAt~v~ 953 (1162)
T Consensus 264 ~Pg~~gi~~~tgvdiA~~Ii~~i 286 (300)
T PRK10446 264 SPGLEGIEKTTGIDIAGKMIRWI 286 (300)
T ss_pred CHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 74278898875989899999999