HHsearch alignment for GI: 254780439 and conserved domain: PRK12458

Probab=93.18  E-value=0.42  Score=26.52  Aligned_cols=154  Identities=18%  Similarity=0.196  Sum_probs=88.0

Q ss_pred             CCHHHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCCHH--HHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCC
Q ss_conf             899999999987199-6999413267866451116999--9999999899857998279866449978999999972899
Q gi|254780439|r  203 HAMAVAVQALDEIGL-PLIIRPSFTLGGTGGGIAYNRS--EFLEIVENGLHASPTTEVLIEESVLGWKEYELEMMRDIKG  279 (1162)
Q Consensus       203 ~s~~ea~~~a~~iGy-PvivRps~~lGG~G~~iv~n~e--eL~~~~~~al~~s~~~~vlIeksl~g~kEiE~eVirD~~g  279 (1162)
T Consensus       154 ~d~~~I~~F~~~~k~~~iIlKPL~G~GG~gIf~i~~~d~~Nl~~I~e~~~---~~~~vm~Q~flpei~~GDkRIil-inG  229 (349)
T PRK12458        154 RNREEIRAFLEESPSDKMILKPLQGSGGQGVFLIEKSAESNLNQILEFYS---GDGYVIAQEYIPGAEEGDVRILM-LNG  229 (349)
T ss_pred             CCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHH---CCCCEEEECCCHHCCCCCEEEEE-ECC
T ss_conf             79999999999815883898646788887638863574341999999970---48819999210034168869999-999


Q ss_pred             CEEEE----EECCCCCCCCCCCCEEEE-------ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE-EECCCCE
Q ss_conf             88999----630000001000010134-------33732289889999999999999871834576468999-9558984
Q gi|254780439|r  280 NCIVV----CSIENLDPMGVHTGDSIT-------VAPALTLTDKEYQLMRNAAIAVLKEIGVESGGANVQFA-VNPKNGK  347 (1162)
Q Consensus       280 n~i~v----~~~En~dp~GiHtGDSi~-------vaP~qTL~d~~~q~LR~~a~kI~r~lgi~vG~~nVQFA-v~p~~~~  347 (1162)
T Consensus       230 epi~~~~~~gal-----~RiP~~gd~R~Nl~~GG~~~~~~Lt~~d~~I~~----~i~p~L~~~-gl---~fvGiDv-IG~  295 (349)
T PRK12458        230 EPLERDGRYAAM-----RRVPAEGDVRSNIHAGGTVVKHTLTKEELELCE----HIRPKLVRD-GL---FFVGLDI-VGD  295 (349)
T ss_pred             EEECCCCCEEEE-----ECCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHH----HHHHHHHHC-CC---EEEEEEE-ECC
T ss_conf             991144541356-----535667613556526886303688999999999----999999987-99---8999986-178


Q ss_pred             EEEEEECCCCCHHHHHHHHHHCCCHHHH
Q ss_conf             9998504443103578887634614767
Q gi|254780439|r  348 MVVIEMNPRVSRSSALASKATGFPIAKI  375 (1162)
Q Consensus       348 ~yvIEvNpR~sRssalaskatgypia~v  375 (1162)
T Consensus       296 -~LtEINVTSPtgi~ei~~~~~~~~a~~  322 (349)
T PRK12458        296 -KLIEVNVFSPGGLGRINKLNNVDFSET  322 (349)
T ss_pred             -CEEEECCCCCHHHHHHHHHHCCCHHHH
T ss_conf             -456881789602999987519986999